CaUC09G173370 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC09G173370
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	NADH-ubiquinone oxidoreductase chain 5
Location	Ciama_Chr09: 31198972 .. 31200498 (+)
RNA-Seq Expression	CaUC09G173370
Synteny	CaUC09G173370

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGCCTCGCATATGGGTAACAAGAAGGCGTTTATGCCCCAACGGTGGGGCCTTATGGGGAAGGGCCCAATCCAATACAGACAGCACACCCCCCATTTCAAGCGCACCTCTGTATCGACTGAATCACTCTTTAAGTCTAGTTGGTGGAACTGGTAAACCATGCGAGTAAGTTAGATGCGTGGGGTAGAGGGCTCGTAATACCCCCATTTTCCTATTCCAGCCTTTTTTTCGCGTCAGTAGTGAATCACCTACTCAAAAAAGAGGCTGGCTTGCACGCCCTATTTGAGACTACTAAGGCAGGCGGTGGACTCTTTCATTAGGGAAGGGAAGAAGGAGCCTAAGCACGGCAGATGCCATACACTTGAGTGGCAAAGGAAAGCAAGATCATACATCTTTTTCCAGGCCTGTTCGAACATAAGGTTCCCGGGGAAGATCAAGTTGGTGAGTCGTGTGATGGGAAACCTTTCCGCACGGTTCGGAAAGCATTGAATGAGAATGAGAGGTTCACCACCGCATCATTGTAGGCAAGGGGAGCTCGCTCGATTTGCAAAAGGGTCCGACTAATAATTCACTTCTGACTCGTTGTTCGATAGCCCGACCATAGTGATGTTAATTGTGGTTACATCCATAAGTAGCTTGGTCCATCTTTATTCCATTTCATATATGTCCGAGGATCCGCATAGCCCTCGATTTATGTGTTATTTATCCATTTTTACTTTTTTTATGCCAATGTTGTTGACTGGATATAACTCTCTTCAATTATTCCTGGGATGGGAGGGAGTAGGCCTTGTTTCATATTTATTAATTCATTTATGGTTTACATGACTTCAGGCAGATAAAGCAGCTATAAGAGCTATGCATATCAATTGATTAGGTGATTTTGGATTAGCTCCTAGGATTTCGGGTCGTTTTACTCTCTTTCAAACAGCAGACTTTTCCACCATTTTTGCTCATGACAGTGCCCCCAGAAATTCTTGGATTTCTTGCAATATGAGATTGAATGCCATAACTCTGATTTGTATTTTACTTCTTATTGGTGCTATTGGGAAATCCACACAGATAGGATCGCATACTTGGTCACCCGATACTATGGAGAGTCCTACTCTAGTATCCGCTTTGACTCATGTAGCTATTATGGTAACAACTGGCATTTTCATGATAGCAAGGTGCCCCCCTTTATTTGAATACCCATTTACGGCTTTGATTGTTATTACTTCTGCAGGAGCTACTGCTTGCAGCAACCACGGGAATATTATAAAACGAACTAAAGAGGGTCATAGCTTATTTAACTTGCAGTCAATTAGGCTATATGATCTTTGTTTGTGGCATCTCTAACTATTCGGTTAGTGTCTTTCACTTAATGAATCATGCATTTTTAAAAGCATTACTATTCTTAAGTGCAAGTTCGGTGATTCATGCCATGTTGGAGCAGGCAAATGGTTTAGTTAAGATATGCCAAATTCCACCAAGTATACAAATGGAACTTAACCATACATGTCCCCCAACCATATCTTCTGTTAGATAA

mRNA sequence

ATGGTGCCTCGCATATGGGTAACAAGAAGGCGTTTATGCCCCAACGGTGGGGCCTTATGGGGAAGGGCCCAATCCAATACAGACAGCACACCCCCCATTTCAAGCGCACCTCTGTATCGACTGAATCACTCTTTAAGTCTAGTTGGTGGAACTGGTAAACCATGCGAGGAAGGGAAGAAGGAGCCTAAGCACGGCAGATGCCATACACTTGAGTGGCAAAGGAAAGCAAGATCATACATCTTTTTCCAGGCCTGTTCGAACATAAGGTTCCCGGGGAAGATCAAGTTGATAGGATCGCATACTTGGTCACCCGATACTATGGAGAGTCCTACTCTAGTATCCGCTTTGACTCATGTAGCTATTATGGTAACAACTGGCATTTTCATGATAGCAAGTCAATTAGGCTATATGATCTTTGTTTGTGGCATCTCTAACTATTCGGTTAGTGTCTTTCACTTAATGAATCATGCATTTTTAAAAGCATTACTATTCTTAAGTGCAAGTTCGGTGATTCATGCCATGTTGGAGCAGGCAAATGGTTTAGTTAAGATATGCCAAATTCCACCAAGTATACAAATGGAACTTAACCATACATGTCCCCCAACCATATCTTCTGTTAGATAA

Coding sequence (CDS)

ATGGTGCCTCGCATATGGGTAACAAGAAGGCGTTTATGCCCCAACGGTGGGGCCTTATGGGGAAGGGCCCAATCCAATACAGACAGCACACCCCCCATTTCAAGCGCACCTCTGTATCGACTGAATCACTCTTTAAGTCTAGTTGGTGGAACTGGTAAACCATGCGAGGAAGGGAAGAAGGAGCCTAAGCACGGCAGATGCCATACACTTGAGTGGCAAAGGAAAGCAAGATCATACATCTTTTTCCAGGCCTGTTCGAACATAAGGTTCCCGGGGAAGATCAAGTTGATAGGATCGCATACTTGGTCACCCGATACTATGGAGAGTCCTACTCTAGTATCCGCTTTGACTCATGTAGCTATTATGGTAACAACTGGCATTTTCATGATAGCAAGTCAATTAGGCTATATGATCTTTGTTTGTGGCATCTCTAACTATTCGGTTAGTGTCTTTCACTTAATGAATCATGCATTTTTAAAAGCATTACTATTCTTAAGTGCAAGTTCGGTGATTCATGCCATGTTGGAGCAGGCAAATGGTTTAGTTAAGATATGCCAAATTCCACCAAGTATACAAATGGAACTTAACCATACATGTCCCCCAACCATATCTTCTGTTAGATAA

Protein sequence

MVPRIWVTRRRLCPNGGALWGRAQSNTDSTPPISSAPLYRLNHSLSLVGGTGKPCEEGKKEPKHGRCHTLEWQRKARSYIFFQACSNIRFPGKIKLIGSHTWSPDTMESPTLVSALTHVAIMVTTGIFMIASQLGYMIFVCGISNYSVSVFHLMNHAFLKALLFLSASSVIHAMLEQANGLVKICQIPPSIQMELNHTCPPTISSVR

Homology

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BLAST of CaUC09G173370 vs. NCBI nr
Match: YP_009526581.1 (NADH dehydrogenase subunit 5 [Ammopiptanthus mongolicus] >AXV54340.1 NADH dehydrogenase subunit 5 [Ammopiptanthus mongolicus])

HSP 1 Score: 233.8 bits (595), Expect = 1.3e-57
Identity = 146/316 (46.20%), Postives = 153/316 (48.42%), Query Frame = 0


Query: 3   PRIWVTRRRLCPNGGALWGRAQSNTDSTPPISSAPLYRLNHSLSLVGGTGKPCE------ 62
           PRIWV R RLCP+GGALWGRAQ N DSTPP SSAPLYRLNHS SLVGGTG+P E      
Sbjct: 56  PRIWVARGRLCPDGGALWGRAQPNRDSTPPTSSAPLYRLNHSKSLVGGTGEPRELACTPY 115

Query: 63  -------------EGKKEPKHGRCHTLEWQRKARSYIFFQACSNIRFPGKIKL------- 122
                        EGKK PKHGRC TLEWQRK RSY+FFQACS+IRFP KIKL       
Sbjct: 116 LRLLRQAVDSFIREGKKGPKHGRCRTLEWQRKGRSYLFFQACSDIRFPRKIKLADKAATK 175

Query: 123 ------------------------------------------------------------ 178
                                                                       
Sbjct: 176 AMPVNRVGDFGLAPGISGRFTLFQTVDFSTIFARASAPRNSWISCNMRLNAITLICILLL 235

[Close]

BLAST of CaUC09G173370 vs. NCBI nr
Match: KAB8477461.1 (hypothetical protein FH972_025327 [Carpinus fangiana])

HSP 1 Score: 227.6 bits (579), Expect = 9.6e-56
Identity = 144/316 (45.57%), Postives = 151/316 (47.78%), Query Frame = 0


Query: 3   PRIWVTRRRLCPNGGALWGRAQSNTDSTPPISSAPLYRLNHSLSLVGGTGKPCE------ 62
           PRIWV R RLCP+GGALWGRAQ N DSTPP SSAPLYRLNHS SLVGGTG+P E      
Sbjct: 134 PRIWVARGRLCPDGGALWGRAQPNRDSTPPTSSAPLYRLNHSKSLVGGTGEPRELACTPY 193

Query: 63  -------------EGKKEPKHGRCHTLEWQRKARSYIFFQACSNIRFPGKIKL------- 122
                        EGKK PKHG C TLEWQRKA SY+FFQACS+IRFP KIKL       
Sbjct: 194 LRLLRQAVDSFIREGKKGPKHGGCRTLEWQRKAGSYLFFQACSDIRFPQKIKLADKAAIK 253

Query: 123 ------------------------------------------------------------ 178
                                                                       
Sbjct: 254 AMPVNRVGDFGLAPGISGCFTLFQTVDFSTIFARASAPRNSWISCNMRLNAITLICILLL 313

[Close]

BLAST of CaUC09G173370 vs. NCBI nr
Match: KJB09767.1 (hypothetical protein B456_001G163400 [Gossypium raimondii])

HSP 1 Score: 204.1 bits (518), Expect = 1.1e-48
Identity = 144/377 (38.20%), Postives = 151/377 (40.05%), Query Frame = 0


Query: 3   PRIWVTRRRLCPNGGALWGRAQSNTDSTPPISSAPLYRLNHSLSLVGGTGKPCE------ 62
           PRIWV R RLCP+GGALWGRAQ N DSTPP SSAPLYRLNHS SLVGGTG+P E      
Sbjct: 182 PRIWVARGRLCPDGGALWGRAQPNRDSTPPTSSAPLYRLNHSKSLVGGTGEPRELVRCVG 241

Query: 63  ----------------------EGKKEPKHGRCHTLEWQRKARSYIFFQACSNIRFPGKI 122
                                 EGKK PKHG C TLEWQRKA SY+FFQAC +IRFP KI
Sbjct: 242 QRRQTCTPYLILLRQVVDSFIREGKKGPKHGGCRTLEWQRKAGSYLFFQACLDIRFPRKI 301

Query: 123 KL---------------------------------------------------------- 178
           KL                                                          
Sbjct: 302 KLVSRPSIYVLFIHSYFFMPMLVTGDNSLQLFLGWEGVGLASYLLIHFWFTRLQADKAAI 361

[Close]

BLAST of CaUC09G173370 vs. NCBI nr
Match: GER38147.1 (NADH-ubiquinone oxidoreductase chain 5 [Striga asiatica])

HSP 1 Score: 189.1 bits (479), Expect = 3.8e-44
Identity = 125/261 (47.89%), Postives = 133/261 (50.96%), Query Frame = 0


Query: 3   PRIWVTRRRLCPNGGALWGRAQSNTDSTPPISSAPLYRLNHSLSLVGGTGKPCEEGKK-- 62
           PRIWV R RLCP+GGALWGRAQ N DSTPP SSAPLYRLNHSL LVGGTG+P E   K  
Sbjct: 141 PRIWVARGRLCPDGGALWGRAQPNRDSTPPTSSAPLYRLNHSLGLVGGTGEPRELADKAA 200

Query: 63  --------------EPKHGRCHTLEWQRKARSYIFFQACSN------------------- 122
                          P    C TL +Q      IF  AC++                   
Sbjct: 201 IKAMLVNRVGDFGLAPGISGCFTL-FQTVDFETIF--ACASAPRNSWISCNMRLNAITLI 260

Query: 123 -----IRFPGKIKLIGSHTWSPDTMESPTLVSALTHVAIMVTTGIFMIA----------- 178
                I   GK   IGSHTWSPD ME PT VSAL H A MVT G+FMIA           
Sbjct: 261 CILLLIGAVGKSAQIGSHTWSPDAMEGPTPVSALIHAATMVTAGVFMIARCSPLFEYPPT 320

[Close]

BLAST of CaUC09G173370 vs. NCBI nr
Match: KAF3617182.1 (NADH-ubiquinone oxidoreductase chain 5 [Capsicum annuum])

HSP 1 Score: 180.6 bits (457), Expect = 1.3e-41
Identity = 122/259 (47.10%), Postives = 131/259 (50.58%), Query Frame = 0


Query: 3   PRIWVTRRRLCPNGGALWGRAQSNTDSTPPISSAPLYRLNHSLSLVGGTGKPCEEGKK-- 62
           PRIWV R  LCP+GGALWGRAQ N DS PP SSAPLYRLNHS  LVGGTG+P E   K  
Sbjct: 56  PRIWVARGCLCPDGGALWGRAQPNRDSIPPTSSAPLYRLNHSFGLVGGTGEPRELADKAA 115

Query: 63  --------------EPKHGRCHTLEWQRKARSYIFFQACS--------NIRF-------- 122
                          P    C TL +Q    S IF +A +        N+R         
Sbjct: 116 IKAMLVNRVGDFGLAPGILGCFTL-FQTVDFSTIFARASAPRNSWISCNMRLNAITLICI 175

Query: 123 ------PGKIKLIGSHTWSPDTMESPTLVSALTHVAIMVTTGIFMIA------------- 178
                  GK   IGSHTWSPD ME PT VSAL H A MVT G+FMIA             
Sbjct: 176 LLFIGAVGKSAQIGSHTWSPDAMEGPTPVSALIHAATMVTAGVFMIARCSPLFEYPPTAL 235

[Close]

BLAST of CaUC09G173370 vs. ExPASy Swiss-Prot
Match: P29388 (NADH-ubiquinone oxidoreductase chain 5 OS=Arabidopsis thaliana OX=3702 GN=ND5 PE=1 SV=3)

HSP 1 Score: 108.2 bits (269), Expect = 1.1e-22
Identity = 67/132 (50.76%), Postives = 70/132 (53.03%), Query Frame = 0


Query: 92  GKIKLIGSHTWSPDTMESPTLVSALTHVAIMVTTGIFMIA-------------------- 151
           GK   IG HTW PD ME PT VSAL H A MVT G+FMIA                    
Sbjct: 231 GKSAQIGLHTWLPDAMEGPTPVSALIHAATMVTAGVFMIARCSPLFEYSPTALIVITSAG 290

Query: 152 --------------------------SQLGYMIFVCGISNYSVSVFHLMNHAFLKALLFL 178
                                     SQLGYMIF CGISNYSVSVFHLMNHAF KALLFL
Sbjct: 291 AMTSFLAATTGILQNDLKRVIAYSTCSQLGYMIFACGISNYSVSVFHLMNHAFFKALLFL 350

[Close]

BLAST of CaUC09G173370 vs. ExPASy Swiss-Prot
Match: P10330 (NADH-ubiquinone oxidoreductase chain 5 OS=Oenothera berteroana OX=3950 GN=ND5 PE=2 SV=2)

HSP 1 Score: 108.2 bits (269), Expect = 1.1e-22
Identity = 67/132 (50.76%), Postives = 70/132 (53.03%), Query Frame = 0


Query: 92  GKIKLIGSHTWSPDTMESPTLVSALTHVAIMVTTGIFMIA-------------------- 151
           GK   IG HTW PD ME PT VSAL H A MVT G+FMIA                    
Sbjct: 231 GKSAQIGLHTWLPDAMEGPTPVSALIHAATMVTAGVFMIARCSPLFEYSPTALIVITFAG 290

Query: 152 --------------------------SQLGYMIFVCGISNYSVSVFHLMNHAFLKALLFL 178
                                     SQLGYMIF CGISNYSVSVFHLMNHAF KALLFL
Sbjct: 291 AMTSFLAATTGILQNDLKRVIAYSTCSQLGYMIFACGISNYSVSVFHLMNHAFFKALLFL 350

[Close]

BLAST of CaUC09G173370 vs. ExPASy Swiss-Prot
Match: Q37680 (NADH-ubiquinone oxidoreductase chain 5 OS=Triticum aestivum OX=4565 GN=ND5 PE=3 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.1e-22
Identity = 67/132 (50.76%), Postives = 70/132 (53.03%), Query Frame = 0


Query: 92  GKIKLIGSHTWSPDTMESPTLVSALTHVAIMVTTGIFMIA-------------------- 151
           GK   IG HTW PD ME PT VSAL H A MVT G+FMIA                    
Sbjct: 231 GKSAQIGLHTWLPDAMEGPTPVSALIHAATMVTAGVFMIARCSPLFEYSPTALIVITFAG 290

Query: 152 --------------------------SQLGYMIFVCGISNYSVSVFHLMNHAFLKALLFL 178
                                     SQLGYMIF CGISNYSVSVFHLMNHAF KALLFL
Sbjct: 291 AMTSFLAATTGILQNDLKRVIAYSTCSQLGYMIFACGISNYSVSVFHLMNHAFFKALLFL 350

[Close]

BLAST of CaUC09G173370 vs. ExPASy Swiss-Prot
Match: P26849 (NADH-ubiquinone oxidoreductase chain 5 OS=Marchantia polymorpha OX=3197 GN=ND5 PE=3 SV=2)

HSP 1 Score: 105.1 bits (261), Expect = 9.4e-22
Identity = 66/132 (50.00%), Postives = 69/132 (52.27%), Query Frame = 0


Query: 92  GKIKLIGSHTWSPDTMESPTLVSALTHVAIMVTTGIFMIA-------------------- 151
           GK   IG HTW PD ME PT VSAL H A MVT G+FMIA                    
Sbjct: 234 GKSAQIGLHTWLPDAMEGPTPVSALIHAATMVTAGVFMIARCSPLFEYSPNALIVITFVG 293

Query: 152 --------------------------SQLGYMIFVCGISNYSVSVFHLMNHAFLKALLFL 178
                                     SQLGYMIF CGISNYSVSVFHLMNHA  KALLFL
Sbjct: 294 AMTSFFAATTGILQNDLKRVIAYSTCSQLGYMIFACGISNYSVSVFHLMNHACFKALLFL 353

[Close]

BLAST of CaUC09G173370 vs. ExPASy Swiss-Prot
Match: Q37372 (NADH-ubiquinone oxidoreductase chain 5 OS=Acanthamoeba castellanii OX=5755 GN=ND5 PE=3 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 5.7e-19
Identity = 59/144 (40.97%), Postives = 71/144 (49.31%), Query Frame = 0


Query: 92  GKIKLIGSHTWSPDTMESPTLVSALTHVAIMVTTGIFMI--------------------- 151
           GK   +G HTW PD ME PT VSAL H A MVT G+F++                     
Sbjct: 232 GKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFVLIRSSPILEYSSTGLFLVSLIG 291

Query: 152 -------------------------ASQLGYMIFVCGISNYSVSVFHLMNHAFLKALLFL 185
                                     SQLGYM F CG+SNYSV +FHL NH F KALLFL
Sbjct: 292 GLTALFAGTVGLVQYDIKKVIAYSTCSQLGYMFFACGMSNYSVGLFHLFNHGFFKALLFL 351

[Close]

BLAST of CaUC09G173370 vs. ExPASy TrEMBL
Match: A0A385G2B9 (NADH dehydrogenase subunit 5 OS=Ammopiptanthus mongolicus OX=126911 GN=nad5 PE=4 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 6.5e-58
Identity = 146/316 (46.20%), Postives = 153/316 (48.42%), Query Frame = 0


Query: 3   PRIWVTRRRLCPNGGALWGRAQSNTDSTPPISSAPLYRLNHSLSLVGGTGKPCE------ 62
           PRIWV R RLCP+GGALWGRAQ N DSTPP SSAPLYRLNHS SLVGGTG+P E      
Sbjct: 56  PRIWVARGRLCPDGGALWGRAQPNRDSTPPTSSAPLYRLNHSKSLVGGTGEPRELACTPY 115

Query: 63  -------------EGKKEPKHGRCHTLEWQRKARSYIFFQACSNIRFPGKIKL------- 122
                        EGKK PKHGRC TLEWQRK RSY+FFQACS+IRFP KIKL       
Sbjct: 116 LRLLRQAVDSFIREGKKGPKHGRCRTLEWQRKGRSYLFFQACSDIRFPRKIKLADKAATK 175

Query: 123 ------------------------------------------------------------ 178
                                                                       
Sbjct: 176 AMPVNRVGDFGLAPGISGRFTLFQTVDFSTIFARASAPRNSWISCNMRLNAITLICILLL 235

[Close]

BLAST of CaUC09G173370 vs. ExPASy TrEMBL
Match: A0A5N6L1B2 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_025327 PE=3 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 4.6e-56
Identity = 144/316 (45.57%), Postives = 151/316 (47.78%), Query Frame = 0


Query: 3   PRIWVTRRRLCPNGGALWGRAQSNTDSTPPISSAPLYRLNHSLSLVGGTGKPCE------ 62
           PRIWV R RLCP+GGALWGRAQ N DSTPP SSAPLYRLNHS SLVGGTG+P E      
Sbjct: 134 PRIWVARGRLCPDGGALWGRAQPNRDSTPPTSSAPLYRLNHSKSLVGGTGEPRELACTPY 193

Query: 63  -------------EGKKEPKHGRCHTLEWQRKARSYIFFQACSNIRFPGKIKL------- 122
                        EGKK PKHG C TLEWQRKA SY+FFQACS+IRFP KIKL       
Sbjct: 194 LRLLRQAVDSFIREGKKGPKHGGCRTLEWQRKAGSYLFFQACSDIRFPQKIKLADKAAIK 253

Query: 123 ------------------------------------------------------------ 178
                                                                       
Sbjct: 254 AMPVNRVGDFGLAPGISGCFTLFQTVDFSTIFARASAPRNSWISCNMRLNAITLICILLL 313

[Close]

BLAST of CaUC09G173370 vs. ExPASy TrEMBL
Match: A0A0D2LZE3 (Proton_antipo_M domain-containing protein OS=Gossypium raimondii OX=29730 GN=B456_001G163400 PE=4 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 5.5e-49
Identity = 144/377 (38.20%), Postives = 151/377 (40.05%), Query Frame = 0


Query: 3   PRIWVTRRRLCPNGGALWGRAQSNTDSTPPISSAPLYRLNHSLSLVGGTGKPCE------ 62
           PRIWV R RLCP+GGALWGRAQ N DSTPP SSAPLYRLNHS SLVGGTG+P E      
Sbjct: 182 PRIWVARGRLCPDGGALWGRAQPNRDSTPPTSSAPLYRLNHSKSLVGGTGEPRELVRCVG 241

Query: 63  ----------------------EGKKEPKHGRCHTLEWQRKARSYIFFQACSNIRFPGKI 122
                                 EGKK PKHG C TLEWQRKA SY+FFQAC +IRFP KI
Sbjct: 242 QRRQTCTPYLILLRQVVDSFIREGKKGPKHGGCRTLEWQRKAGSYLFFQACLDIRFPRKI 301

Query: 123 KL---------------------------------------------------------- 178
           KL                                                          
Sbjct: 302 KLVSRPSIYVLFIHSYFFMPMLVTGDNSLQLFLGWEGVGLASYLLIHFWFTRLQADKAAI 361

[Close]

BLAST of CaUC09G173370 vs. ExPASy TrEMBL
Match: A0A5A7Q196 (NADH-ubiquinone oxidoreductase chain 5 OS=Striga asiatica OX=4170 GN=STAS_14607 PE=4 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 1.8e-44
Identity = 125/261 (47.89%), Postives = 133/261 (50.96%), Query Frame = 0


Query: 3   PRIWVTRRRLCPNGGALWGRAQSNTDSTPPISSAPLYRLNHSLSLVGGTGKPCEEGKK-- 62
           PRIWV R RLCP+GGALWGRAQ N DSTPP SSAPLYRLNHSL LVGGTG+P E   K  
Sbjct: 141 PRIWVARGRLCPDGGALWGRAQPNRDSTPPTSSAPLYRLNHSLGLVGGTGEPRELADKAA 200

Query: 63  --------------EPKHGRCHTLEWQRKARSYIFFQACSN------------------- 122
                          P    C TL +Q      IF  AC++                   
Sbjct: 201 IKAMLVNRVGDFGLAPGISGCFTL-FQTVDFETIF--ACASAPRNSWISCNMRLNAITLI 260

Query: 123 -----IRFPGKIKLIGSHTWSPDTMESPTLVSALTHVAIMVTTGIFMIA----------- 178
                I   GK   IGSHTWSPD ME PT VSAL H A MVT G+FMIA           
Sbjct: 261 CILLLIGAVGKSAQIGSHTWSPDAMEGPTPVSALIHAATMVTAGVFMIARCSPLFEYPPT 320

[Close]

BLAST of CaUC09G173370 vs. ExPASy TrEMBL
Match: A0A2N9G584 (Proton_antipo_M domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS22604 PE=4 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 1.8e-44
Identity = 125/259 (48.26%), Postives = 134/259 (51.74%), Query Frame = 0


Query: 3   PRIWVTRRRLCPNGGALWGRAQSNTDSTPPISSAPLYRLNHSLSLVGGTGKPCEEGKK-- 62
           PRIWV R RLCP+GGALWGRAQ N DSTPP SSAPLYRLNHS SLVGGTG+P E   K  
Sbjct: 354 PRIWVARGRLCPDGGALWGRAQPNRDSTPPTSSAPLYRLNHSKSLVGGTGEPRELADKAA 413

Query: 63  --------------EPKHGRCHTLEWQRKARSYIFFQACS--------NIRF-------- 122
                          P    C TL +Q    S IF +A +        N+R         
Sbjct: 414 IKAMPVNRVGDFGLAPGISGCFTL-FQTVDFSTIFARASAPRNSWISCNMRLNAITLICI 473

Query: 123 ------PGKIKLIGSHTWSPDTMESPTLVSALTHVAIMVTTGIFMIA------------- 178
                  GK   IGSHTWSPD ME PT VSA  H A MVT G+FMIA             
Sbjct: 474 LLLIGAVGKSAQIGSHTWSPDAMEGPTPVSASIHAATMVTAGVFMIARCSPLFEYPPTAL 533

[Close]

BLAST of CaUC09G173370 vs. TAIR 10
Match: ATMG00060.1 (NADH dehydrogenase subunit 5C )

HSP 1 Score: 110.5 bits (275), Expect = 1.6e-24
Identity = 68/132 (51.52%), Postives = 71/132 (53.79%), Query Frame = 0


Query: 92  GKIKLIGSHTWSPDTMESPTLVSALTHVAIMVTTGIFMIA-------------------- 151
           GK   IGSHTWSPD ME PT VSA  H A MVT G+FMIA                    
Sbjct: 231 GKSAQIGSHTWSPDAMEGPTPVSASIHAATMVTAGVFMIARCSPLFEYPPTALIVITSAG 290

Query: 152 --------------------------SQLGYMIFVCGISNYSVSVFHLMNHAFLKALLFL 178
                                     SQLGYMIF CGISNYSVSVFHLMNHAF KALLFL
Sbjct: 291 ATTSFLAATTGILQNDLKRVIAYSTCSQLGYMIFACGISNYSVSVFHLMNHAFFKALLFL 350

[Close]

BLAST of CaUC09G173370 vs. TAIR 10
Match: ATMG00513.1 (NADH dehydrogenase 5A )

HSP 1 Score: 110.5 bits (275), Expect = 1.6e-24
Identity = 68/132 (51.52%), Postives = 71/132 (53.79%), Query Frame = 0


Query: 92  GKIKLIGSHTWSPDTMESPTLVSALTHVAIMVTTGIFMIA-------------------- 151
           GK   IGSHTWSPD ME PT VSA  H A MVT G+FMIA                    
Sbjct: 231 GKSAQIGSHTWSPDAMEGPTPVSASIHAATMVTAGVFMIARCSPLFEYPPTALIVITSAG 290

Query: 152 --------------------------SQLGYMIFVCGISNYSVSVFHLMNHAFLKALLFL 178
                                     SQLGYMIF CGISNYSVSVFHLMNHAF KALLFL
Sbjct: 291 ATTSFLAATTGILQNDLKRVIAYSTCSQLGYMIFACGISNYSVSVFHLMNHAFFKALLFL 350

[Close]

BLAST of CaUC09G173370 vs. TAIR 10
Match: ATMG00665.1 (NADH dehydrogenase 5B )

HSP 1 Score: 110.5 bits (275), Expect = 1.6e-24
Identity = 68/132 (51.52%), Postives = 71/132 (53.79%), Query Frame = 0


Query: 92  GKIKLIGSHTWSPDTMESPTLVSALTHVAIMVTTGIFMIA-------------------- 151
           GK   IGSHTWSPD ME PT VSA  H A MVT G+FMIA                    
Sbjct: 231 GKSAQIGSHTWSPDAMEGPTPVSASIHAATMVTAGVFMIARCSPLFEYPPTALIVITSAG 290

Query: 152 --------------------------SQLGYMIFVCGISNYSVSVFHLMNHAFLKALLFL 178
                                     SQLGYMIF CGISNYSVSVFHLMNHAF KALLFL
Sbjct: 291 ATTSFLAATTGILQNDLKRVIAYSTCSQLGYMIFACGISNYSVSVFHLMNHAFFKALLFL 350

[Close]

BLAST of CaUC09G173370 vs. TAIR 10
Match: ATCG01010.1 (NADH-Ubiquinone oxidoreductase (complex I), chain 5 protein )

HSP 1 Score: 71.2 bits (173), Expect = 1.1e-12
Identity = 47/144 (32.64%), Postives = 63/144 (43.75%), Query Frame = 0


Query: 80  IFFQACSNIRFPGKIKLIGS---HTWSPDTMESPTLVSALTHVAIMVTTGIFMIA----- 139
           +F   C+ + F G I        H W PD ME PT +SAL H A MV  GIF++A     
Sbjct: 224 LFLTLCAFLLFVGPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPL 283

Query: 140 -----------------------------------------SQLGYMIFVCGISNYSVSV 175
                                                    SQLGYM+   G+ +Y  ++
Sbjct: 284 FIVIPSIMYIISLIGIITVLLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSAL 343

The following BLAST results are available for this feature:

BLAST of CaUC09G173370 vs. NCBI nr


Match Name	E-value	Identity	Description
YP_009526581.1	1.3e-57	46.20	NADH dehydrogenase subunit 5 [Ammopiptanthus mongolicus] >AXV54340.1 NADH dehydr...	[more]
KAB8477461.1	9.6e-56	45.57	hypothetical protein FH972_025327 [Carpinus fangiana]	[more]
KJB09767.1	1.1e-48	38.20	hypothetical protein B456_001G163400 [Gossypium raimondii]	[more]
GER38147.1	3.8e-44	47.89	NADH-ubiquinone oxidoreductase chain 5 [Striga asiatica]	[more]
KAF3617182.1	1.3e-41	47.10	NADH-ubiquinone oxidoreductase chain 5 [Capsicum annuum]	[more]

BLAST of CaUC09G173370 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P29388	1.1e-22	50.76	NADH-ubiquinone oxidoreductase chain 5 OS=Arabidopsis thaliana OX=3702 GN=ND5 PE...	[more]
P10330	1.1e-22	50.76	NADH-ubiquinone oxidoreductase chain 5 OS=Oenothera berteroana OX=3950 GN=ND5 PE...	[more]
Q37680	1.1e-22	50.76	NADH-ubiquinone oxidoreductase chain 5 OS=Triticum aestivum OX=4565 GN=ND5 PE=3 ...	[more]
P26849	9.4e-22	50.00	NADH-ubiquinone oxidoreductase chain 5 OS=Marchantia polymorpha OX=3197 GN=ND5 P...	[more]
Q37372	5.7e-19	40.97	NADH-ubiquinone oxidoreductase chain 5 OS=Acanthamoeba castellanii OX=5755 GN=ND...	[more]

BLAST of CaUC09G173370 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A385G2B9	6.5e-58	46.20	NADH dehydrogenase subunit 5 OS=Ammopiptanthus mongolicus OX=126911 GN=nad5 PE=4...	[more]
A0A5N6L1B2	4.6e-56	45.57	Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_025327 PE=3 SV=1	[more]
A0A0D2LZE3	5.5e-49	38.20	Proton_antipo_M domain-containing protein OS=Gossypium raimondii OX=29730 GN=B45...	[more]
A0A5A7Q196	1.8e-44	47.89	NADH-ubiquinone oxidoreductase chain 5 OS=Striga asiatica OX=4170 GN=STAS_14607 ...	[more]
A0A2N9G584	1.8e-44	48.26	Proton_antipo_M domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOC...	[more]

BLAST of CaUC09G173370 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00060.1	1.6e-24	51.52	NADH dehydrogenase subunit 5C	[more]
ATMG00513.1	1.6e-24	51.52	NADH dehydrogenase 5A	[more]
ATMG00665.1	1.6e-24	51.52	NADH dehydrogenase 5B	[more]
ATCG01010.1	1.1e-12	32.64	NADH-Ubiquinone oxidoreductase (complex I), chain 5 protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR01434	NADHDHGNASE5	coord: 89..110 score: 38.34 coord: 111..137 score: 43.4
None	No IPR available	PANTHER	PTHR42829	NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 5	coord: 132..177 coord: 92..131
IPR001750	NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit	PFAM	PF00361	Proton_antipo_M	coord: 92..131 e-value: 5.8E-6 score: 25.7 coord: 132..176 e-value: 1.7E-6 score: 27.5

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC09G173370.1	CaUC09G173370.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015986	ATP synthesis coupled proton transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0045263	proton-transporting ATP synthase complex, coupling factor F(o)
molecular_function	GO:0008289	lipid binding
molecular_function	GO:0015078	proton transmembrane transporter activity