CaUC09G172610 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC09G172610
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	glutelin type-B 5-like
Location	Ciama_Chr09: 27941172 .. 27941460 (+)
RNA-Seq Expression	CaUC09G172610
Synteny	CaUC09G172610

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTCCGTGAAGGAAACATCAGTGTCTCCAAGCTTACTCTCAAGAAGAATAGTTTTACTCTCCCTCGCTACTCTGATTTCGCCAAGGTTGCTTACGTTCTTCGAGGTATTTTCTCAATGCAATCTATTTAGATTTATTTTGAGTGTTTATTTTAGTATGAATCTAATTGATGAGCAAAATGGTCTAGGTAATGGAGTAGCTGAAATCATTATGTCAGAATCAGAGGAGAAGGTGATCACAATCAAGAAAGGAGATGCGATTGCTCTTCCATTTGGTGTTGTAACATGA

mRNA sequence

ATGCTCCGTGAAGGAAACATCAGTGTCTCCAAGCTTACTCTCAAGAAGAATAGTTTTACTCTCCCTCGCTACTCTGATTTCGCCAAGGTTGCTTACGTTCTTCGAGGTAATGGAGTAGCTGAAATCATTATGTCAGAATCAGAGGAGAAGGTGATCACAATCAAGAAAGGAGATGCGATTGCTCTTCCATTTGGTGTTGTAACATGA

Coding sequence (CDS)

ATGCTCCGTGAAGGAAACATCAGTGTCTCCAAGCTTACTCTCAAGAAGAATAGTTTTACTCTCCCTCGCTACTCTGATTTCGCCAAGGTTGCTTACGTTCTTCGAGGTAATGGAGTAGCTGAAATCATTATGTCAGAATCAGAGGAGAAGGTGATCACAATCAAGAAAGGAGATGCGATTGCTCTTCCATTTGGTGTTGTAACATGA

Protein sequence

MLREGNISVSKLTLKKNSFTLPRYSDFAKVAYVLRGNGVAEIIMSESEEKVITIKKGDAIALPFGVVT

Homology

[Close]

BLAST of CaUC09G172610 vs. NCBI nr
Match: XP_022159414.1 (legumin type B-like, partial [Momordica charantia])

HSP 1 Score: 109.8 bits (273), Expect = 9.6e-21
Identity = 56/68 (82.35%), Postives = 59/68 (86.76%), Query Frame = 0


Query: 1  MLREGNISVSKLTLKKNSFTLPRYSDFAKVAYVLRGNGVAEIIMSESEEKVITIKKGDAI 60
          MLREGNI  SKL L+KN F LPRYSD AKVAYVL+GNGVA II+ ESEEKVI IKKGDAI
Sbjct: 31 MLREGNIGASKLALEKNGFALPRYSDSAKVAYVLQGNGVAGIILPESEEKVIAIKKGDAI 90

Query: 61 ALPFGVVT 69
          ALPFGVVT
Sbjct: 91 ALPFGVVT 98

[Close]

BLAST of CaUC09G172610 vs. NCBI nr
Match: XP_004150394.1 (glutelin type-D 1 [Cucumis sativus] >KGN44409.1 hypothetical protein Csa_015780 [Cucumis sativus])

HSP 1 Score: 109.8 bits (273), Expect = 9.6e-21
Identity = 56/68 (82.35%), Postives = 59/68 (86.76%), Query Frame = 0


Query: 1  MLREGNISVSKLTLKKNSFTLPRYSDFAKVAYVLRGNGVAEIIMSESEEKVITIKKGDAI 60
          MLREGNI  SKL L+KN F LPRYSD AKVAYVL+GNGVA II+ ESEEKVI IKKGDAI
Sbjct: 31 MLREGNIGASKLALEKNGFALPRYSDSAKVAYVLQGNGVAGIILPESEEKVIAIKKGDAI 90

Query: 61 ALPFGVVT 69
          ALPFGVVT
Sbjct: 91 ALPFGVVT 98

[Close]

BLAST of CaUC09G172610 vs. NCBI nr
Match: XP_023535755.1 (glutelin type-D 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 108.6 bits (270), Expect = 2.1e-20
Identity = 55/68 (80.88%), Postives = 59/68 (86.76%), Query Frame = 0


Query: 1  MLREGNISVSKLTLKKNSFTLPRYSDFAKVAYVLRGNGVAEIIMSESEEKVITIKKGDAI 60
          MLREGNI  +KL L+KN F LPRYSD AKVAYVL+GNGVA II+ ESEEKVI IKKGDAI
Sbjct: 31 MLREGNIGAAKLALEKNGFALPRYSDSAKVAYVLQGNGVAGIILPESEEKVIAIKKGDAI 90

Query: 61 ALPFGVVT 69
          ALPFGVVT
Sbjct: 91 ALPFGVVT 98

[Close]

BLAST of CaUC09G172610 vs. NCBI nr
Match: XP_022932542.1 (glutelin type-D 1-like [Cucurbita moschata])

HSP 1 Score: 108.6 bits (270), Expect = 2.1e-20
Identity = 55/68 (80.88%), Postives = 59/68 (86.76%), Query Frame = 0


Query: 1  MLREGNISVSKLTLKKNSFTLPRYSDFAKVAYVLRGNGVAEIIMSESEEKVITIKKGDAI 60
          MLREGNI  +KL L+KN F LPRYSD AKVAYVL+GNGVA II+ ESEEKVI IKKGDAI
Sbjct: 31 MLREGNIGAAKLALEKNGFALPRYSDSAKVAYVLQGNGVAGIILPESEEKVIAIKKGDAI 90

Query: 61 ALPFGVVT 69
          ALPFGVVT
Sbjct: 91 ALPFGVVT 98

[Close]

BLAST of CaUC09G172610 vs. NCBI nr
Match: XP_022976927.1 (glutelin type-D 1-like [Cucurbita maxima])

HSP 1 Score: 108.6 bits (270), Expect = 2.1e-20
Identity = 55/68 (80.88%), Postives = 59/68 (86.76%), Query Frame = 0


Query: 1  MLREGNISVSKLTLKKNSFTLPRYSDFAKVAYVLRGNGVAEIIMSESEEKVITIKKGDAI 60
          MLREGNI  +KL L+KN F LPRYSD AKVAYVL+GNGVA II+ ESEEKVI IKKGDAI
Sbjct: 31 MLREGNIGAAKLALEKNGFALPRYSDSAKVAYVLQGNGVAGIILPESEEKVIAIKKGDAI 90

Query: 61 ALPFGVVT 69
          ALPFGVVT
Sbjct: 91 ALPFGVVT 98

[Close]

BLAST of CaUC09G172610 vs. ExPASy TrEMBL
Match: A0A0A0K666 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G281380 PE=3 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 4.6e-21
Identity = 56/68 (82.35%), Postives = 59/68 (86.76%), Query Frame = 0


Query: 1  MLREGNISVSKLTLKKNSFTLPRYSDFAKVAYVLRGNGVAEIIMSESEEKVITIKKGDAI 60
          MLREGNI  SKL L+KN F LPRYSD AKVAYVL+GNGVA II+ ESEEKVI IKKGDAI
Sbjct: 31 MLREGNIGASKLALEKNGFALPRYSDSAKVAYVLQGNGVAGIILPESEEKVIAIKKGDAI 90

Query: 61 ALPFGVVT 69
          ALPFGVVT
Sbjct: 91 ALPFGVVT 98

[Close]

BLAST of CaUC09G172610 vs. ExPASy TrEMBL
Match: A0A6J1E2B5 (legumin type B-like OS=Momordica charantia OX=3673 GN=LOC111025835 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 4.6e-21
Identity = 56/68 (82.35%), Postives = 59/68 (86.76%), Query Frame = 0


Query: 1  MLREGNISVSKLTLKKNSFTLPRYSDFAKVAYVLRGNGVAEIIMSESEEKVITIKKGDAI 60
          MLREGNI  SKL L+KN F LPRYSD AKVAYVL+GNGVA II+ ESEEKVI IKKGDAI
Sbjct: 31 MLREGNIGASKLALEKNGFALPRYSDSAKVAYVLQGNGVAGIILPESEEKVIAIKKGDAI 90

Query: 61 ALPFGVVT 69
          ALPFGVVT
Sbjct: 91 ALPFGVVT 98

[Close]

BLAST of CaUC09G172610 vs. ExPASy TrEMBL
Match: A0A6J1IH21 (glutelin type-D 1-like OS=Cucurbita maxima OX=3661 GN=LOC111477153 PE=3 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 1.0e-20
Identity = 55/68 (80.88%), Postives = 59/68 (86.76%), Query Frame = 0


Query: 1  MLREGNISVSKLTLKKNSFTLPRYSDFAKVAYVLRGNGVAEIIMSESEEKVITIKKGDAI 60
          MLREGNI  +KL L+KN F LPRYSD AKVAYVL+GNGVA II+ ESEEKVI IKKGDAI
Sbjct: 31 MLREGNIGAAKLALEKNGFALPRYSDSAKVAYVLQGNGVAGIILPESEEKVIAIKKGDAI 90

Query: 61 ALPFGVVT 69
          ALPFGVVT
Sbjct: 91 ALPFGVVT 98

[Close]

BLAST of CaUC09G172610 vs. ExPASy TrEMBL
Match: A0A6J1EX25 (glutelin type-D 1-like OS=Cucurbita moschata OX=3662 GN=LOC111439037 PE=3 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 1.0e-20
Identity = 55/68 (80.88%), Postives = 59/68 (86.76%), Query Frame = 0


Query: 1  MLREGNISVSKLTLKKNSFTLPRYSDFAKVAYVLRGNGVAEIIMSESEEKVITIKKGDAI 60
          MLREGNI  +KL L+KN F LPRYSD AKVAYVL+GNGVA II+ ESEEKVI IKKGDAI
Sbjct: 31 MLREGNIGAAKLALEKNGFALPRYSDSAKVAYVLQGNGVAGIILPESEEKVIAIKKGDAI 90

Query: 61 ALPFGVVT 69
          ALPFGVVT
Sbjct: 91 ALPFGVVT 98

[Close]

BLAST of CaUC09G172610 vs. ExPASy TrEMBL
Match: A0A5A7UAB0 (Glutelin type-B 5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold675G00320 PE=3 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 1.8e-20
Identity = 55/68 (80.88%), Postives = 59/68 (86.76%), Query Frame = 0


Query: 1  MLREGNISVSKLTLKKNSFTLPRYSDFAKVAYVLRGNGVAEIIMSESEEKVITIKKGDAI 60
          MLREGNI  SKL L+KN F LPRYSD AKVAYVL+G+GVA II+ ESEEKVI IKKGDAI
Sbjct: 31 MLREGNIGASKLALEKNGFALPRYSDSAKVAYVLQGSGVAGIILPESEEKVIAIKKGDAI 90

Query: 61 ALPFGVVT 69
          ALPFGVVT
Sbjct: 91 ALPFGVVT 98

[Close]

BLAST of CaUC09G172610 vs. TAIR 10
Match: AT1G07750.1 (RmlC-like cupins superfamily protein )

HSP 1 Score: 95.9 bits (237), Expect = 1.3e-20
Identity = 45/68 (66.18%), Postives = 57/68 (83.82%), Query Frame = 0


Query: 1  MLREGNISVSKLTLKKNSFTLPRYSDFAKVAYVLRGNGVAEIIMSESEEKVITIKKGDAI 60
          ML++GNI  +KL L+KN F +PRYSD +KVAYVL+G+G A I++ E EEKVI IK+GD+I
Sbjct: 31 MLKQGNIGAAKLALEKNGFAVPRYSDSSKVAYVLQGSGTAGIVLPEKEEKVIAIKQGDSI 90

Query: 61 ALPFGVVT 69
          ALPFGVVT
Sbjct: 91 ALPFGVVT 98

[Close]

BLAST of CaUC09G172610 vs. TAIR 10
Match: AT2G28680.1 (RmlC-like cupins superfamily protein )

HSP 1 Score: 93.6 bits (231), Expect = 6.6e-20
Identity = 47/68 (69.12%), Postives = 53/68 (77.94%), Query Frame = 0


Query: 1  MLREGNISVSKLTLKKNSFTLPRYSDFAKVAYVLRGNGVAEIIMSESEEKVITIKKGDAI 60
          MLR+GNI  SKL L+K    LPRYSD  KVAYVL+G G A I++ E EEKVI IKKGD+I
Sbjct: 31 MLRDGNIGASKLALEKYGLALPRYSDSPKVAYVLQGAGTAGIVLPEKEEKVIAIKKGDSI 90

Query: 61 ALPFGVVT 69
          ALPFGVVT
Sbjct: 91 ALPFGVVT 98

The following BLAST results are available for this feature:

BLAST of CaUC09G172610 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022159414.1	9.6e-21	82.35	legumin type B-like, partial [Momordica charantia]	[more]
XP_004150394.1	9.6e-21	82.35	glutelin type-D 1 [Cucumis sativus] >KGN44409.1 hypothetical protein Csa_015780 ...	[more]
XP_023535755.1	2.1e-20	80.88	glutelin type-D 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022932542.1	2.1e-20	80.88	glutelin type-D 1-like [Cucurbita moschata]	[more]
XP_022976927.1	2.1e-20	80.88	glutelin type-D 1-like [Cucurbita maxima]	[more]

BLAST of CaUC09G172610 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CaUC09G172610 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K666	4.6e-21	82.35	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G281380 PE=3 SV=1	[more]
A0A6J1E2B5	4.6e-21	82.35	legumin type B-like OS=Momordica charantia OX=3673 GN=LOC111025835 PE=4 SV=1	[more]
A0A6J1IH21	1.0e-20	80.88	glutelin type-D 1-like OS=Cucurbita maxima OX=3661 GN=LOC111477153 PE=3 SV=1	[more]
A0A6J1EX25	1.0e-20	80.88	glutelin type-D 1-like OS=Cucurbita moschata OX=3662 GN=LOC111439037 PE=3 SV=1	[more]
A0A5A7UAB0	1.8e-20	80.88	Glutelin type-B 5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold6...	[more]

BLAST of CaUC09G172610 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G07750.1	1.3e-20	66.18	RmlC-like cupins superfamily protein	[more]
AT2G28680.1	6.6e-20	69.12	RmlC-like cupins superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006045	Cupin 1	PFAM	PF00190	Cupin_1	coord: 2..67 e-value: 1.0E-10 score: 41.3
IPR014710	RmlC-like jelly roll fold	GENE3D	2.60.120.10	Jelly Rolls	coord: 1..68 e-value: 7.0E-14 score: 53.7
None	No IPR available	PANTHER	PTHR31189:SF51	SUBFAMILY NOT NAMED	coord: 1..68
None	No IPR available	PANTHER	PTHR31189	OS03G0336100 PROTEIN-RELATED	coord: 1..68
IPR011051	RmlC-like cupin domain superfamily	SUPERFAMILY	51182	RmlC-like cupins	coord: 2..67

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC09G172610.1	CaUC09G172610.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0045735	nutrient reservoir activity