CaUC09G171640 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC09G171640
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Unknown protein
Location	Ciama_Chr09: 24574326 .. 24576087 (-)
RNA-Seq Expression	CaUC09G171640
Synteny	CaUC09G171640

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GATAAATGGATCAGTGGGCGCACGGAGATACCTCAACTATGTTAATACGTCCATAATATCCTGTCATCTATATTAGTAATTAATACATTAATACATTGTTGGTAGTTTTCACAAAATTAATTCATTATTTATGAAAAAAACATACATAATTGATAAAAAACGTGCATATGTAAAAAACTAGTAATTAATAATCATTTTCTTCAAATTTTAGATGTCAAACAATTTTTTTTTTTACCTTTAACAATCCCTAAAAAAACAATTATGATTATATTGGCAAGTTTTAAATTTACTTGGTCAATGTAAATTTTGAATTAAATTAGATCTTTGAACCTATTAATTTTAAATTATTGGGACTCTTTATTATCGATTTTGATTTGAAAATAATCTTTTTTAAATCTGTTAATTTTAAATTAATAAGACTCTCAATTATCGATTTTAATTTGAAAATAAGAATTTGTAGCTTAAATCGTAAGTTAGCAAATTAATTTTCTTAAAAGGTTGGTAAAAAAGAGATTTGTTTTTATTAAATTCTTTAATTTCAAATTTGTGGGCTTTAATACTGAAATTTTGTTTCCCAAATCTTGTGGTTAGTGTCAATTTTCGGTAAAACATATAATTTTATTTAGAATTTAATGCAGGTTTACAGTGGTTTTAAAATAATTAAAATCACTTTTGTCATTTTTAAAATTGGTTGAAACACATTTTTAATCACTTAAAATTAATTTAGTTTTCAATTTTACACTTTTATATCATCAAAATTTATTCTAGAAGATTAAAAATATGTTAATTGTGATTTTGAAAAGTAAAATTATCTTAAATTACAAAACTATTAAAAATATTTACAAATAATAGCAAAATAAAACAATGTATCTGCTATAGTCTATCGTAGTCTAAATTTTGCTATATTTATAAATATTATAGTTTATTTTTCTATATTTAAGAAAAATTTTTGAAAATGACAAAATGATTTTAGCAAATTATTTTAGATGTTTTTTTTTTAATTATTTTTTTTATTTTTTTTAATGATTTTCTTTTTAAAGAAAAGAAAAGAAAGGGTGAAACTTCTCCCCCTTCCACTCTCTCACGTTCAGCCGCCCCCTCCCCTTCCGTCAACTTCTCTGTCCGTTCGCCTCAGCCGCAGCAGTCACCGCCAGCCTGCTCCTCCACCGACGTCGTCCCGACCGTCGACAGCGGCGAGCATACGGCGACACTCACGAACAGTTCCAGCAGTGTTTGGCAGCTTTTTTTTTTTCTTTCGGCAAGGTTCGATACTTACCCATTCTATTTCGACCATAGATTTGAGTTACCCATTGTTTGACGACTCCAAGTGTGCAGAGATTAAGTTTATTCGGACACCAACCAACAAGGATTCTAGTCGTTTTTGGCAAGAATCCGTGGGTAGAACACTCTAAACTTCTTTTCGAGCTAGTTTGAAGTTCTTTAGATTGATCTCTACTGTTCGGAACCTATACCCGTAGATTTGAAGTAGTTTTGGAACCGTTCGAGCAGCAAGGACTCAAATCTGCTTTGGTAAGTTTTAGTTGATAGGACTCTTTCGTGCTGATTTTAGGTGCTGTAAATTCGTTTCTATCTCATGGGCATACTTTATTTGTGGTTAGACTTGATTTGAGGTGCTTCAATTGAGGTTTAAAGCCGCTTTAGCTAAGACTACTCATTCCAAACAATTGTTAAGGCTCCGCATAAGGGTTCGAACTACGTTCTAACCTTGGAACTTTGATTTTACTATTTCAGGAGCCTTTAG

mRNA sequence

GATAAATGGATCAGTGGGCGCACGGAGATACCTCAACTATGTTTACAGTGAAAAGAAAAGAAAGGGTGAAACTTCTCCCCCTTCCACTCTCTCACGTTCAGCCGCCCCCTCCCCTTCCGTCAACTTCTCTGTCCGTTCGCCTCAGCCGCAGCAGTCACCGCCAGCCTGCTCCTCCACCGACGTCGTCCCGACCGAGCCTTTAG

Coding sequence (CDS)

ATGGATCAGTGGGCGCACGGAGATACCTCAACTATGTTTACAGTGAAAAGAAAAGAAAGGGTGAAACTTCTCCCCCTTCCACTCTCTCACGTTCAGCCGCCCCCTCCCCTTCCGTCAACTTCTCTGTCCGTTCGCCTCAGCCGCAGCAGTCACCGCCAGCCTGCTCCTCCACCGACGTCGTCCCGACCGAGCCTTTAG

Protein sequence

MDQWAHGDTSTMFTVKRKERVKLLPLPLSHVQPPPPLPSTSLSVRLSRSSHRQPAPPPTSSRPSL

Homology

The following BLAST results are available for this feature:

BLAST of CaUC09G171640 vs.


Match Name	E-value	Identity	Description

BLAST of CaUC09G171640 vs.


Match Name	E-value	Identity	Description

BLAST of CaUC09G171640 vs.


Match Name	E-value	Identity	Description

BLAST of CaUC09G171640 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 41..55
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..65

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC09G171640.1	CaUC09G171640.1	mRNA