CaUC09G170960 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC09G170960
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	60S ribosomal protein L35
Location	Ciama_Chr09: 19321685 .. 19322008 (-)
RNA-Seq Expression	CaUC09G170960
Synteny	CaUC09G170960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAGAAATGGCCAGGATCAAGGTTCATTAGTTGAGGCAGAAATTGAAGGCAAATTTGCCAAAGTCATCGGTGGTGCACCAAACAAGCTATCCAAAATCAAGGTATTGAGATTGTCGATCACTCAAGTCCCAATAGTAATTTCTCAAAAGCAGAAGGTGGCAATCAAGGAAGCTTACAAGAAGAAGAAACTTTTGCATGTCGATCTGCAGCCAAAGAATACCGAGGTCATCCATAAAACGCTCACCAAGCACCAGGCTTCTTTGAAAACTGAGACAGAAGAAGAAAGAAATGTACTTTCCATTGAGGAAATATGCTATTAA

mRNA sequence

ATGGGAAGAAATGGCCAGGATCAAGGTTCATTAGTTGAGGCAGAAATTGAAGGCAAATTTGCCAAAGTCATCGGTGGTGCACCAAACAAGCTATCCAAAATCAAGGTATTGAGATTGTCGATCACTCAAGTCCCAATAGTAATTTCTCAAAAGCAGAAGGTGGCAATCAAGGAAGCTTACAAGAAGAAGAAACTTTTGCATGTCGATCTGCAGCCAAAGAATACCGAGGTCATCCATAAAACGCTCACCAAGCACCAGGCTTCTTTGAAAACTGAGACAGAAGAAGAAAGAAATGTACTTTCCATTGAGGAAATATGCTATTAA

Coding sequence (CDS)

ATGGGAAGAAATGGCCAGGATCAAGGTTCATTAGTTGAGGCAGAAATTGAAGGCAAATTTGCCAAAGTCATCGGTGGTGCACCAAACAAGCTATCCAAAATCAAGGTATTGAGATTGTCGATCACTCAAGTCCCAATAGTAATTTCTCAAAAGCAGAAGGTGGCAATCAAGGAAGCTTACAAGAAGAAGAAACTTTTGCATGTCGATCTGCAGCCAAAGAATACCGAGGTCATCCATAAAACGCTCACCAAGCACCAGGCTTCTTTGAAAACTGAGACAGAAGAAGAAAGAAATGTACTTTCCATTGAGGAAATATGCTATTAA

Protein sequence

MGRNGQDQGSLVEAEIEGKFAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAIKEAYKKKKLLHVDLQPKNTEVIHKTLTKHQASLKTETEEERNVLSIEEICY

Homology

[Close]

BLAST of CaUC09G170960 vs. NCBI nr
Match: TYG77058.1 (hypothetical protein ES288_D03G164700v1 [Gossypium darwinii])

HSP 1 Score: 114.8 bits (286), Expect = 4.7e-22
Identity = 62/89 (69.66%), Postives = 72/89 (80.90%), Query Frame = 0


Query: 19  KFAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAIKEAYKKKKLLHVDLQPKNTEVI 78
           + AKV GGAPNKLSKIKV+RLSI QV  VISQKQK A++EAYKKKK L +DL+PK T  I
Sbjct: 32  RVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKFLPLDLRPKKTRAI 91

Query: 79  HKTLTKHQASLKTETEEERNVLSIEEICY 108
            + LTKHQ SLKTE EEE +VLS EE+C+
Sbjct: 92  RRRLTKHQQSLKTEGEEEGDVLSTEEVCH 120

[Close]

BLAST of CaUC09G170960 vs. NCBI nr
Match: KAG7998768.1 (hypothetical protein I3843_01G272600 [Carya illinoinensis])

HSP 1 Score: 110.9 bits (276), Expect = 6.8e-21
Identity = 59/89 (66.29%), Postives = 71/89 (79.78%), Query Frame = 0


Query: 19  KFAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAIKEAYKKKKLLHVDLQPKNTEVI 78
           + AKV GGAPNKLSKIKV+RLSI QV  VISQKQK A++E YKKKK L +DL+PK T  I
Sbjct: 32  RVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKEALREVYKKKKYLPLDLRPKKTRAI 91

Query: 79  HKTLTKHQASLKTETEEERNVLSIEEICY 108
            + LT+HQASLKT  EEE +V S+EE+C+
Sbjct: 92  RRRLTRHQASLKTAAEEEGDVFSLEEVCH 120

[Close]

BLAST of CaUC09G170960 vs. NCBI nr
Match: GAV80675.1 (Ribosomal_L29 domain-containing protein [Cephalotus follicularis])

HSP 1 Score: 105.1 bits (261), Expect = 3.7e-19
Identity = 57/81 (70.37%), Postives = 67/81 (82.72%), Query Frame = 0


Query: 19  KFAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAIKEAYKKKKLLHVDLQPKNTEVI 78
           + AKV GGAPNKLSKIKV+RLSI QV  VISQKQK A++EAYKKKKLL +DL+PK T  I
Sbjct: 32  RVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAI 91

Query: 79  HKTLTKHQASLKTETEEERNV 100
            + LTKHQASLKTE E++R +
Sbjct: 92  RRRLTKHQASLKTEREKKREM 112

[Close]

BLAST of CaUC09G170960 vs. NCBI nr
Match: PON89563.1 (Ribosomal protein [Trema orientale])

HSP 1 Score: 104.4 bits (259), Expect = 6.3e-19
Identity = 56/81 (69.14%), Postives = 67/81 (82.72%), Query Frame = 0


Query: 19  KFAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAIKEAYKKKKLLHVDLQPKNTEVI 78
           + AKV GGAPNKLSKIKV+RLSI QV  VISQKQK A++EAYK KKLL +DL+PK T  I
Sbjct: 32  RVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKNKKLLPLDLRPKKTRAI 91

Query: 79  HKTLTKHQASLKTETEEERNV 100
            + LTKHQASLKTE E++R++
Sbjct: 92  RRRLTKHQASLKTEREKKRDI 112

[Close]

BLAST of CaUC09G170960 vs. NCBI nr
Match: XP_023549703.1 (60S ribosomal protein L35-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 104.0 bits (258), Expect = 8.3e-19
Identity = 56/81 (69.14%), Postives = 67/81 (82.72%), Query Frame = 0


Query: 19  KFAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAIKEAYKKKKLLHVDLQPKNTEVI 78
           + AKV GGAPNKLSKIKV+RLSI QV  VISQKQK A++EAYKKKKLL +DL+PK T  I
Sbjct: 32  RVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAI 91

Query: 79  HKTLTKHQASLKTETEEERNV 100
            + LTKHQASLKTE E+++ +
Sbjct: 92  RRKLTKHQASLKTEREKKKEM 112

[Close]

BLAST of CaUC09G170960 vs. ExPASy Swiss-Prot
Match: O80626 (60S ribosomal protein L35-2 OS=Arabidopsis thaliana OX=3702 GN=RPL35B PE=2 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 3.5e-20
Identity = 54/81 (66.67%), Postives = 65/81 (80.25%), Query Frame = 0


Query: 19  KFAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAIKEAYKKKKLLHVDLQPKNTEVI 78
           + AKV GGAPNKLSKIKV+R SI QV  VISQKQK A++EAYK KKLL +DL+PK T  I
Sbjct: 32  RVAKVTGGAPNKLSKIKVVRKSIAQVLTVISQKQKSALREAYKNKKLLPLDLRPKKTRAI 91

Query: 79  HKTLTKHQASLKTETEEERNV 100
            + LTKHQASLKTE E+++ +
Sbjct: 92  RRRLTKHQASLKTEREKKKEM 112

[Close]

BLAST of CaUC09G170960 vs. ExPASy Swiss-Prot
Match: Q9LZ41 (60S ribosomal protein L35-4 OS=Arabidopsis thaliana OX=3702 GN=RPL35D PE=2 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 3.5e-20
Identity = 54/81 (66.67%), Postives = 65/81 (80.25%), Query Frame = 0


Query: 19  KFAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAIKEAYKKKKLLHVDLQPKNTEVI 78
           + AKV GGAPNKLSKIKV+R SI QV  VISQKQK A++EAYK KKLL +DL+PK T  I
Sbjct: 32  RVAKVTGGAPNKLSKIKVVRKSIAQVLTVISQKQKSALREAYKNKKLLPLDLRPKKTRAI 91

Query: 79  HKTLTKHQASLKTETEEERNV 100
            + LTKHQASLKTE E+++ +
Sbjct: 92  RRRLTKHQASLKTEREKKKEM 112

[Close]

BLAST of CaUC09G170960 vs. ExPASy Swiss-Prot
Match: Q9M5L0 (60S ribosomal protein L35 OS=Euphorbia esula OX=3993 GN=RPL35 PE=2 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 3.5e-20
Identity = 53/81 (65.43%), Postives = 65/81 (80.25%), Query Frame = 0


Query: 19  KFAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAIKEAYKKKKLLHVDLQPKNTEVI 78
           + AKV GGAPNKLSKIKV+RLSI QV  VISQKQK+A++EAYK KK L +DL+PK T  I
Sbjct: 32  RVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKLALREAYKNKKFLPLDLRPKKTRAI 91

Query: 79  HKTLTKHQASLKTETEEERNV 100
            + LTKHQ SLKTE E+++ +
Sbjct: 92  RRRLTKHQQSLKTEREKKKEM 112

[Close]

BLAST of CaUC09G170960 vs. ExPASy Swiss-Prot
Match: Q9M3D2 (60S ribosomal protein L35-3 OS=Arabidopsis thaliana OX=3702 GN=RPL35C PE=2 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 1.3e-19
Identity = 53/81 (65.43%), Postives = 65/81 (80.25%), Query Frame = 0


Query: 19  KFAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAIKEAYKKKKLLHVDLQPKNTEVI 78
           + AKV GGAPNKLSKIKV+R SI QV  V SQKQK A++EAYK KKLL +DL+PK T  I
Sbjct: 32  RVAKVTGGAPNKLSKIKVVRKSIAQVLTVSSQKQKSALREAYKNKKLLPLDLRPKKTRAI 91

Query: 79  HKTLTKHQASLKTETEEERNV 100
            + LTKHQASLKTE E+++++
Sbjct: 92  RRRLTKHQASLKTEREKKKDM 112

[Close]

BLAST of CaUC09G170960 vs. ExPASy Swiss-Prot
Match: Q9SF53 (60S ribosomal protein L35-1 OS=Arabidopsis thaliana OX=3702 GN=RPL35A PE=2 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 1.7e-19
Identity = 53/81 (65.43%), Postives = 64/81 (79.01%), Query Frame = 0


Query: 19  KFAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAIKEAYKKKKLLHVDLQPKNTEVI 78
           + AKV GGAPNKLSKIKV+R SI QV  V SQKQK A++EAYK KKLL +DL+PK T  I
Sbjct: 32  RVAKVTGGAPNKLSKIKVVRKSIAQVLTVSSQKQKSALREAYKNKKLLPLDLRPKKTRAI 91

Query: 79  HKTLTKHQASLKTETEEERNV 100
            + LTKHQASLKTE E+++ +
Sbjct: 92  RRRLTKHQASLKTEREKKKEM 112

[Close]

BLAST of CaUC09G170960 vs. ExPASy TrEMBL
Match: A0A5D2D7Q5 (Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_D03G164700v1 PE=3 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 2.3e-22
Identity = 62/89 (69.66%), Postives = 72/89 (80.90%), Query Frame = 0


Query: 19  KFAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAIKEAYKKKKLLHVDLQPKNTEVI 78
           + AKV GGAPNKLSKIKV+RLSI QV  VISQKQK A++EAYKKKK L +DL+PK T  I
Sbjct: 32  RVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKFLPLDLRPKKTRAI 91

Query: 79  HKTLTKHQASLKTETEEERNVLSIEEICY 108
            + LTKHQ SLKTE EEE +VLS EE+C+
Sbjct: 92  RRRLTKHQQSLKTEGEEEGDVLSTEEVCH 120

[Close]

BLAST of CaUC09G170960 vs. ExPASy TrEMBL
Match: A0A1Q3CKE6 (Ribosomal_L29 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_24135 PE=3 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.8e-19
Identity = 57/81 (70.37%), Postives = 67/81 (82.72%), Query Frame = 0


Query: 19  KFAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAIKEAYKKKKLLHVDLQPKNTEVI 78
           + AKV GGAPNKLSKIKV+RLSI QV  VISQKQK A++EAYKKKKLL +DL+PK T  I
Sbjct: 32  RVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAI 91

Query: 79  HKTLTKHQASLKTETEEERNV 100
            + LTKHQASLKTE E++R +
Sbjct: 92  RRRLTKHQASLKTEREKKREM 112

[Close]

BLAST of CaUC09G170960 vs. ExPASy TrEMBL
Match: A0A2P5EVJ6 (Ribosomal protein OS=Trema orientale OX=63057 GN=TorRG33x02_147070 PE=3 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 3.1e-19
Identity = 56/81 (69.14%), Postives = 67/81 (82.72%), Query Frame = 0


Query: 19  KFAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAIKEAYKKKKLLHVDLQPKNTEVI 78
           + AKV GGAPNKLSKIKV+RLSI QV  VISQKQK A++EAYK KKLL +DL+PK T  I
Sbjct: 32  RVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKNKKLLPLDLRPKKTRAI 91

Query: 79  HKTLTKHQASLKTETEEERNV 100
            + LTKHQASLKTE E++R++
Sbjct: 92  RRRLTKHQASLKTEREKKRDI 112

[Close]

BLAST of CaUC09G170960 vs. ExPASy TrEMBL
Match: A0A6J1JVN4 (60S ribosomal protein L35 OS=Cucurbita maxima OX=3661 GN=LOC111488270 PE=3 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 4.0e-19
Identity = 56/81 (69.14%), Postives = 67/81 (82.72%), Query Frame = 0


Query: 19  KFAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAIKEAYKKKKLLHVDLQPKNTEVI 78
           + AKV GGAPNKLSKIKV+RLSI QV  VISQKQK A++EAYKKKKLL +DL+PK T  I
Sbjct: 32  RVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAI 91

Query: 79  HKTLTKHQASLKTETEEERNV 100
            + LTKHQASLKTE E+++ +
Sbjct: 92  RRRLTKHQASLKTEREKKKEM 112

[Close]

BLAST of CaUC09G170960 vs. ExPASy TrEMBL
Match: A0A6J1FH81 (60S ribosomal protein L35 OS=Cucurbita moschata OX=3662 GN=LOC111445667 PE=3 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 4.0e-19
Identity = 56/81 (69.14%), Postives = 67/81 (82.72%), Query Frame = 0


Query: 19  KFAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAIKEAYKKKKLLHVDLQPKNTEVI 78
           + AKV GGAPNKLSKIKV+RLSI QV  VISQKQK A++EAYKKKKLL +DL+PK T  I
Sbjct: 32  RVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAI 91

Query: 79  HKTLTKHQASLKTETEEERNV 100
            + LTKHQASLKTE E+++ +
Sbjct: 92  RRRLTKHQASLKTEREKKKEM 112

[Close]

BLAST of CaUC09G170960 vs. TAIR 10
Match: AT2G39390.1 (Ribosomal L29 family protein )

HSP 1 Score: 99.0 bits (245), Expect = 2.5e-21
Identity = 54/81 (66.67%), Postives = 65/81 (80.25%), Query Frame = 0


Query: 19  KFAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAIKEAYKKKKLLHVDLQPKNTEVI 78
           + AKV GGAPNKLSKIKV+R SI QV  VISQKQK A++EAYK KKLL +DL+PK T  I
Sbjct: 32  RVAKVTGGAPNKLSKIKVVRKSIAQVLTVISQKQKSALREAYKNKKLLPLDLRPKKTRAI 91

Query: 79  HKTLTKHQASLKTETEEERNV 100
            + LTKHQASLKTE E+++ +
Sbjct: 92  RRRLTKHQASLKTEREKKKEM 112

[Close]

BLAST of CaUC09G170960 vs. TAIR 10
Match: AT5G02610.1 (Ribosomal L29 family protein )

HSP 1 Score: 99.0 bits (245), Expect = 2.5e-21
Identity = 54/81 (66.67%), Postives = 65/81 (80.25%), Query Frame = 0


Query: 19  KFAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAIKEAYKKKKLLHVDLQPKNTEVI 78
           + AKV GGAPNKLSKIKV+R SI QV  VISQKQK A++EAYK KKLL +DL+PK T  I
Sbjct: 32  RVAKVTGGAPNKLSKIKVVRKSIAQVLTVISQKQKSALREAYKNKKLLPLDLRPKKTRAI 91

Query: 79  HKTLTKHQASLKTETEEERNV 100
            + LTKHQASLKTE E+++ +
Sbjct: 92  RRRLTKHQASLKTEREKKKEM 112

[Close]

BLAST of CaUC09G170960 vs. TAIR 10
Match: AT3G55170.1 (Ribosomal L29 family protein )

HSP 1 Score: 97.1 bits (240), Expect = 9.4e-21
Identity = 53/81 (65.43%), Postives = 65/81 (80.25%), Query Frame = 0


Query: 19  KFAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAIKEAYKKKKLLHVDLQPKNTEVI 78
           + AKV GGAPNKLSKIKV+R SI QV  V SQKQK A++EAYK KKLL +DL+PK T  I
Sbjct: 32  RVAKVTGGAPNKLSKIKVVRKSIAQVLTVSSQKQKSALREAYKNKKLLPLDLRPKKTRAI 91

Query: 79  HKTLTKHQASLKTETEEERNV 100
            + LTKHQASLKTE E+++++
Sbjct: 92  RRRLTKHQASLKTEREKKKDM 112

[Close]

BLAST of CaUC09G170960 vs. TAIR 10
Match: AT3G55170.2 (Ribosomal L29 family protein )

HSP 1 Score: 97.1 bits (240), Expect = 9.4e-21
Identity = 53/81 (65.43%), Postives = 65/81 (80.25%), Query Frame = 0


Query: 19  KFAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAIKEAYKKKKLLHVDLQPKNTEVI 78
           + AKV GGAPNKLSKIKV+R SI QV  V SQKQK A++EAYK KKLL +DL+PK T  I
Sbjct: 32  RVAKVTGGAPNKLSKIKVVRKSIAQVLTVSSQKQKSALREAYKNKKLLPLDLRPKKTRAI 91

Query: 79  HKTLTKHQASLKTETEEERNV 100
            + LTKHQASLKTE E+++++
Sbjct: 92  RRRLTKHQASLKTEREKKKDM 112

[Close]

BLAST of CaUC09G170960 vs. TAIR 10
Match: AT3G09500.1 (Ribosomal L29 family protein )

HSP 1 Score: 96.7 bits (239), Expect = 1.2e-20
Identity = 53/81 (65.43%), Postives = 64/81 (79.01%), Query Frame = 0


Query: 19  KFAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAIKEAYKKKKLLHVDLQPKNTEVI 78
           + AKV GGAPNKLSKIKV+R SI QV  V SQKQK A++EAYK KKLL +DL+PK T  I
Sbjct: 32  RVAKVTGGAPNKLSKIKVVRKSIAQVLTVSSQKQKSALREAYKNKKLLPLDLRPKKTRAI 91

Query: 79  HKTLTKHQASLKTETEEERNV 100
            + LTKHQASLKTE E+++ +
Sbjct: 92  RRRLTKHQASLKTEREKKKEM 112

The following BLAST results are available for this feature:

BLAST of CaUC09G170960 vs. NCBI nr


Match Name	E-value	Identity	Description
TYG77058.1	4.7e-22	69.66	hypothetical protein ES288_D03G164700v1 [Gossypium darwinii]	[more]
KAG7998768.1	6.8e-21	66.29	hypothetical protein I3843_01G272600 [Carya illinoinensis]	[more]
GAV80675.1	3.7e-19	70.37	Ribosomal_L29 domain-containing protein [Cephalotus follicularis]	[more]
PON89563.1	6.3e-19	69.14	Ribosomal protein [Trema orientale]	[more]
XP_023549703.1	8.3e-19	69.14	60S ribosomal protein L35-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CaUC09G170960 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80626	3.5e-20	66.67	60S ribosomal protein L35-2 OS=Arabidopsis thaliana OX=3702 GN=RPL35B PE=2 SV=1	[more]
Q9LZ41	3.5e-20	66.67	60S ribosomal protein L35-4 OS=Arabidopsis thaliana OX=3702 GN=RPL35D PE=2 SV=1	[more]
Q9M5L0	3.5e-20	65.43	60S ribosomal protein L35 OS=Euphorbia esula OX=3993 GN=RPL35 PE=2 SV=1	[more]
Q9M3D2	1.3e-19	65.43	60S ribosomal protein L35-3 OS=Arabidopsis thaliana OX=3702 GN=RPL35C PE=2 SV=1	[more]
Q9SF53	1.7e-19	65.43	60S ribosomal protein L35-1 OS=Arabidopsis thaliana OX=3702 GN=RPL35A PE=2 SV=1	[more]

BLAST of CaUC09G170960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D2D7Q5	2.3e-22	69.66	Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_D03G164700v1 PE=...	[more]
A0A1Q3CKE6	1.8e-19	70.37	Ribosomal_L29 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CF...	[more]
A0A2P5EVJ6	3.1e-19	69.14	Ribosomal protein OS=Trema orientale OX=63057 GN=TorRG33x02_147070 PE=3 SV=1	[more]
A0A6J1JVN4	4.0e-19	69.14	60S ribosomal protein L35 OS=Cucurbita maxima OX=3661 GN=LOC111488270 PE=3 SV=1	[more]
A0A6J1FH81	4.0e-19	69.14	60S ribosomal protein L35 OS=Cucurbita moschata OX=3662 GN=LOC111445667 PE=3 SV=...	[more]

BLAST of CaUC09G170960 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G39390.1	2.5e-21	66.67	Ribosomal L29 family protein	[more]
AT5G02610.1	2.5e-21	66.67	Ribosomal L29 family protein	[more]
AT3G55170.1	9.4e-21	65.43	Ribosomal L29 family protein	[more]
AT3G55170.2	9.4e-21	65.43	Ribosomal L29 family protein	[more]
AT3G09500.1	1.2e-20	65.43	Ribosomal L29 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	6.10.250.3450		coord: 65..101 e-value: 3.5E-6 score: 29.1
None	No IPR available	PANTHER	PTHR45722:SF21	60S RIBOSOMAL PROTEIN L35-LIKE	coord: 19..99
IPR036049	Ribosomal protein L29/L35 superfamily	GENE3D	1.10.287.310		coord: 13..64 e-value: 1.9E-13 score: 52.6
IPR045059	60S ribosomal protein L35	PANTHER	PTHR45722	60S RIBOSOMAL PROTEIN L35	coord: 19..99

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC09G170960.1	CaUC09G170960.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000463	maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003735	structural constituent of ribosome