CaUC09G170470 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC09G170470
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
LocationCiama_Chr09: 16240116 .. 16241201 (-)
RNA-Seq ExpressionCaUC09G170470
SyntenyCaUC09G170470
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACCTTGAAGGTTGTTGTACAACTAATGGGCTTTGAGAATGCCCAAAGCCTATGGGAAGCCATCCATGCTCCACTTAGTGTACAATCAAGAGCTGAGGAAGATTGCTTACGACATGTCTTCCAACAAACTTGTAAAGCGAATTCGACAATATCTTAGTATTTGAAACTAATGAAATTGCATATGATAATTTAACACAAGTTGGTAGTTTGGTGACAACTCGTAATTTAGTTTCCCAAGTGTTGCTTAGACTGGATGAAGAATACAATCCAGTGTTGGTTGTACTCCAAAGTAAGCCTGACATCTCCTAACTTGATATGTAGTCAAAACTACTCTCATTTGAGAAGCGATTGGAACACCAAAACACAACAAAATCGACAGTATCATTTGGCCATAATGTTACTGTTAATCTGGCGTTTAATAGAAATCCATCTTTATCTAAATCACCTAGTTGTATAGTCATCAGGGCAACACCAACAAACATAACTTCACTAGATTGAGCGGCAATCCACAATTTAATGGTGGATGAAACAGAGGCAAGGGTCGTGGCAGGGGAAACCGACCGACATGTCAAGTGTGCACCAAATATTGACACATTGTAGACATGTGTTATCAAAGGTACAACAAGGAGTTTGTACCAAATAAAAATCAGGGAAAAGGTAACAACACTCGAAGGTCCTTTGGACAAAATCCTGCTACCTTTATAACCACTCATAACCCGAATCCATTTGTAGCCACACTTGAAACCATAGGAGACTTCAATTGGTATGATGGTAGTGGTGCCACAAACCATGTCACTGCGGATTTCAATCACATTGCAAATCCCACAGACTACACAGGTAATGAGCAAGTCACAGTAGGTAATGGTGAAAGTTTGTGTATCTCTACTATTGGTAATTCATGTTTAAATACCAATAAATGTGATCTAAACTTAGAAAATGTGCTATGTGTACCTGTTATTGCTAAAAACCTAGTTAGTATATTGAAGCTAGCTTAGGATAATGCTATATTCGTTGAATTTCATGGTGATTTTTGTGTGATTAAGGACAAGCAGACAAGCAAAATTCTAGTGAGAGGAACACTTAA

mRNA sequence

ATGACCTTGAAGGTTGTTGTACAACTAATGGGCTTTGAGAATGCCCAAAGCCTATGGGAAGCCATCCATGCTCCACTTAGTGTACAATCAAGAGCTGAGGAAGATTGCTTACGACATGTCTTCCAACAAACTTTTTCCCAAGTGTTGCTTAGACTGGATGAAGAATACAATCCAGTGTTGGTTTCAAAACTACTCTCATTTGAGAAGCGATTGGAACACCAAAACACAACAAAATCGACAGTATCATTTGGCCATAATGTTACTGTTAATCTGGCGTTTAATAGAAATCCATCTTTATCTAAATCACCTAGTTCGGCAATCCACAATTTAATGGTGGATGAAACAGAGGCAAGGGTCGTGGCAGGGGAAACCGACCGACATGTCAAGTGTGCACCAAATATTGACACATTGTCCTTTGGACAAAATCCTGCTACCTTTATAACCACTCATAACCCGAATCCATTTGTAGCCACACTTGAAACCATAGGAGACTTCAATTGGTATGATGGTAGTGGTGCCACAAACCATGTCACTGCGGATTTCAATCACATTGCAAATCCCACAGACTACACAGGTAATGAGCAAGTCACAGTAGGTAATGGTGAAAGTTTGTGTATCTCTACTATTGGACAAGCAGACAAGCAAAATTCTAGTGAGAGGAACACTTAA

Coding sequence (CDS)

ATGACCTTGAAGGTTGTTGTACAACTAATGGGCTTTGAGAATGCCCAAAGCCTATGGGAAGCCATCCATGCTCCACTTAGTGTACAATCAAGAGCTGAGGAAGATTGCTTACGACATGTCTTCCAACAAACTTTTTCCCAAGTGTTGCTTAGACTGGATGAAGAATACAATCCAGTGTTGGTTTCAAAACTACTCTCATTTGAGAAGCGATTGGAACACCAAAACACAACAAAATCGACAGTATCATTTGGCCATAATGTTACTGTTAATCTGGCGTTTAATAGAAATCCATCTTTATCTAAATCACCTAGTTCGGCAATCCACAATTTAATGGTGGATGAAACAGAGGCAAGGGTCGTGGCAGGGGAAACCGACCGACATGTCAAGTGTGCACCAAATATTGACACATTGTCCTTTGGACAAAATCCTGCTACCTTTATAACCACTCATAACCCGAATCCATTTGTAGCCACACTTGAAACCATAGGAGACTTCAATTGGTATGATGGTAGTGGTGCCACAAACCATGTCACTGCGGATTTCAATCACATTGCAAATCCCACAGACTACACAGGTAATGAGCAAGTCACAGTAGGTAATGGTGAAAGTTTGTGTATCTCTACTATTGGACAAGCAGACAAGCAAAATTCTAGTGAGAGGAACACTTAA

Protein sequence

MTLKVVVQLMGFENAQSLWEAIHAPLSVQSRAEEDCLRHVFQQTFSQVLLRLDEEYNPVLVSKLLSFEKRLEHQNTTKSTVSFGHNVTVNLAFNRNPSLSKSPSSAIHNLMVDETEARVVAGETDRHVKCAPNIDTLSFGQNPATFITTHNPNPFVATLETIGDFNWYDGSGATNHVTADFNHIANPTDYTGNEQVTVGNGESLCISTIGQADKQNSSERNT
Homology
BLAST of CaUC09G170470 vs. NCBI nr
Match: XP_016902197.1 (PREDICTED: uncharacterized protein LOC107991581 isoform X1 [Cucumis melo])

HSP 1 Score: 123.6 bits (309), Expect = 2.1e-24
Identity = 98/260 (37.69%), Postives = 125/260 (48.08%), Query Frame = 0

Query: 1   MTLKVVVQLMGFENAQSLWEAIHAPLSVQSRAEEDCLRHVFQQTFSQVLLRLDEEYNPVL 60
           MT  V +QLMGF N + LW+A      VQSRAEED LR + Q T       LDE YN V+
Sbjct: 123 MTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRK----GLDEVYNLVI 182

Query: 61  V--------------SKLLSFEKRLEHQNTTKS-----TVSFGHNVTVNLAFN--RNPS- 120
           V              SKLL FEKRL+HQNT K      T S   N+    A N  RN S 
Sbjct: 183 VVIQGKPDISWLDMQSKLLIFEKRLKHQNTQKKNTGNITQSPALNMAQRFALNGQRNQSN 242

Query: 121 -----------------LSKSPSSAI-----------HNLMVDETEARVVAGETDRHVKC 180
                            L+  P+  +           +N    E  + +V    +     
Sbjct: 243 KKFYGYNRQHFSGQRGNLNNGPTCQLCGKYGHSALVCYNRFNKEFSSPLVQNRNE----- 302

Query: 181 APNIDTLSFGQNPATFITTHNPNPFVATLETIGDFNWYDGSGATNHVTADFNHIANPTDY 211
             +    S   NPA F++T N  PF AT +T+ D NWY  SGATNHVT + +++ NPT+Y
Sbjct: 303 --HSSNGSVSPNPAVFVSTQNATPF-ATPDTVVDPNWYIDSGATNHVTRECSNMTNPTEY 362

BLAST of CaUC09G170470 vs. NCBI nr
Match: TYK05754.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 119.8 bits (299), Expect = 3.0e-23
Identity = 96/293 (32.76%), Postives = 133/293 (45.39%), Query Frame = 0

Query: 5   VVVQLMGFENAQSLWEAIHAPLSVQSRAEEDCLRHVFQQT-------------------- 64
           + +QLMGF NA+ LWEA      VQSRAEED LR +FQ T                    
Sbjct: 45  IAIQLMGFTNAKDLWEATQDLFGVQSRAEEDFLRQMFQTTRKVRASYEDYLRIMKTNSDK 104

Query: 65  -------------FSQVLLRLDEEYNPVLV--------------SKLLSFEKRLEHQNTT 124
                         SQ LL LDE YNPV+               S+LL+FEKRLEHQ+T 
Sbjct: 105 LGQAGSPVPKRAFISQALLGLDEVYNPVIAVIQGKPEISWIDMQSELLTFEKRLEHQDTQ 164

Query: 125 KSTVSFGHNVTVNLAFNRNPS-LSKSPSSAIHNLMVDETEAR------------------ 184
           K+T +   NV VN+A NRN S   K  +   H    + ++ +                  
Sbjct: 165 KNTENIIQNV-VNIAQNRNSSDFRKYSNHQFHGNNRNNSQGQRGGFNIGRGRGKGRGNKP 224

Query: 185 ------------VVAGETDRHVKCAPNI-------DTLSFGQNPATFITTHNPNPFVATL 213
                       +V          +P +          S   N    +T  + N F AT 
Sbjct: 225 TCQVCEKYGHSALVCYNRFNKEFLSPLVQDRGAQSSNFSKHSNLTVLVTGQSVNQF-ATA 284

BLAST of CaUC09G170470 vs. NCBI nr
Match: XP_038905164.1 (uncharacterized protein LOC120091275 isoform X4 [Benincasa hispida])

HSP 1 Score: 110.2 bits (274), Expect = 2.4e-20
Identity = 86/286 (30.07%), Postives = 120/286 (41.96%), Query Frame = 0

Query: 1   MTLKVVVQLMGFENAQSLWEAIHAPLSVQSRAEEDCLRHVFQQT---------------- 60
           MT +V +Q+MG E A+ LW +I     VQSR EED LRHVFQ T                
Sbjct: 64  MTPEVAIQVMGCECAKDLWTSIPQLFGVQSRVEEDYLRHVFQTTRKGNLKMEEYLQTMKM 123

Query: 61  -----------------FSQVLLRLDEEYNPVLV--------------SKLLSFEKRLEH 120
                             SQVLL LDEEYN ++               S+LL +E+RLEH
Sbjct: 124 NTDNLEQAGSPMPPRTLVSQVLLGLDEEYNAIVAMIQGRVDMSWLDMQSELLLYERRLEH 183

Query: 121 QNTTKSTVSFGH--NVTVNLAFNRNPSLSKSPSSAIHNL--------------------- 180
           Q+  K+TV F    N +VN+   R+ + +   +S+  ++                     
Sbjct: 184 QSNQKTTVGFNQISNASVNMTNTRHVNQNNKTNSSNQSIGGGQRGGGGHGRGRGRGRNNK 243

Query: 181 ----------------MVDETEARVVAGETDRHVKCAPNIDTLSFGQNPATFITTHNPNP 201
                             +      V       V+  PN  T +   +P      +  NP
Sbjct: 244 KPVCQVCGKVGHIAFYCFNRYSRDFVPNSPQNKVEPFPNNQTKNTQPHPTALAIAYGSNP 303

BLAST of CaUC09G170470 vs. NCBI nr
Match: XP_038905161.1 (uncharacterized protein LOC120091275 isoform X1 [Benincasa hispida])

HSP 1 Score: 109.4 bits (272), Expect = 4.1e-20
Identity = 88/296 (29.73%), Postives = 124/296 (41.89%), Query Frame = 0

Query: 1   MTLKVVVQLMGFENAQSLWEAIHAPLSVQSRAEEDCLRHVFQQT---------------- 60
           MT +V +Q+MG E A+ LW +I     VQSR EED LRHVFQ T                
Sbjct: 64  MTPEVAIQVMGCECAKDLWTSIPQLFGVQSRVEEDYLRHVFQTTRKGNLKMEEYLQTMKM 123

Query: 61  -----------------FSQVLLRLDEEYNPVLV--------------SKLLSFEKRLEH 120
                             SQVLL LDEEYN ++               S+LL +E+RLEH
Sbjct: 124 NTDNLEQAGSPMPPRTLVSQVLLGLDEEYNAIVAMIQGRVDMSWLDMQSELLLYERRLEH 183

Query: 121 QNTTKSTVSFGH--NVTVNLAFNRNPSLSKSPSSAIHNL--------------------- 180
           Q+  K+TV F    N +VN+   R+ + +   +S+  ++                     
Sbjct: 184 QSNQKTTVGFNQISNASVNMTNTRHVNQNNKTNSSNQSIGGGQRGGGGHGRGRGRGRNNK 243

Query: 181 ----------------MVDETEARVVAGETDRHVKCAPNIDTLSFGQNPATFITTHNPNP 211
                             +      V       V+  PN  T +   +P      +  NP
Sbjct: 244 KPVCQVCGKVGHIAFYCFNRYSRDFVPNSPQNKVEPFPNNQTKNTQPHPTALAIAYGSNP 303

BLAST of CaUC09G170470 vs. NCBI nr
Match: XP_022151683.1 (uncharacterized protein LOC111019598 [Momordica charantia])

HSP 1 Score: 108.6 bits (270), Expect = 7.0e-20
Identity = 87/270 (32.22%), Postives = 120/270 (44.44%), Query Frame = 0

Query: 1   MTLKVVVQLMGFENAQSLWEAIHAPLSVQSRAEEDCLRHVFQQT---------------- 60
           M   V +Q+MGF  ++ LW A+     VQSRAE D L+ VFQQT                
Sbjct: 118 MAADVAMQVMGFSTSRELWTAVQELFGVQSRAEVDYLKQVFQQTCKGSLQMIEYLKLMKS 177

Query: 61  -----------------FSQVLLRLDEEYNPVLV--------------SKLLSFEKRLEH 120
                             SQVL  LDEEYNP++V              ++LL++EKRLE+
Sbjct: 178 HADNLALAGSSVSVRDLVSQVLTGLDEEYNPIVVAVQGKVNLSWSEMHAELLTYEKRLEY 237

Query: 121 QNTTKSTVSFGHNVTVNL------AFNRNPSLSKSPSSAIHNLMVDETEARVVAGETDRH 180
           QN+ KS +      T ++      +F  N   +   +S   N        R   G+ +R 
Sbjct: 238 QNSLKSGIPINQTQTPSVNYVDGRSFQTNQRTNNGNNSHGSNTHRGGGYQRGSFGQRNRG 297

Query: 181 VKCAP----NIDTLSFGQNPATFITTHNPNPFVATLETIGDFNWYDGSGATNHVTADFNH 214
               P    N    + G N       H+ +  V T ET+ D +WY  SGAT+HVTA+ N+
Sbjct: 298 RGPQPTQHKNFTPSNSGPN---VFAAHHTSTTVTTPETVIDPSWYADSGATSHVTANPNN 357

BLAST of CaUC09G170470 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 3.3e-04
Identity = 26/78 (33.33%), Postives = 38/78 (48.72%), Query Frame = 0

Query: 141 QNPATFITTHNPNPFVATLETIGDFNWYDGSGATNHVTADFNHIANPTDYTGNEQVTVGN 200
           Q P +  T   P   +A        NW   SGAT+H+T+DFN+++    YTG + V V +
Sbjct: 305 QQPPSPFTPWQPRANLALGSPYSSNNWLLDSGATHHITSDFNNLSLHQPYTGGDDVMVAD 364

Query: 201 GESLCISTIGQADKQNSS 219
           G ++ IS  G       S
Sbjct: 365 GSTIPISHTGSTSLSTKS 382

BLAST of CaUC09G170470 vs. ExPASy TrEMBL
Match: A0A1S4E1U6 (uncharacterized protein LOC107991581 isoform X1 OS=Cucumis melo OX=3656 GN=LOC107991581 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 1.0e-24
Identity = 98/260 (37.69%), Postives = 125/260 (48.08%), Query Frame = 0

Query: 1   MTLKVVVQLMGFENAQSLWEAIHAPLSVQSRAEEDCLRHVFQQTFSQVLLRLDEEYNPVL 60
           MT  V +QLMGF N + LW+A      VQSRAEED LR + Q T       LDE YN V+
Sbjct: 123 MTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRK----GLDEVYNLVI 182

Query: 61  V--------------SKLLSFEKRLEHQNTTKS-----TVSFGHNVTVNLAFN--RNPS- 120
           V              SKLL FEKRL+HQNT K      T S   N+    A N  RN S 
Sbjct: 183 VVIQGKPDISWLDMQSKLLIFEKRLKHQNTQKKNTGNITQSPALNMAQRFALNGQRNQSN 242

Query: 121 -----------------LSKSPSSAI-----------HNLMVDETEARVVAGETDRHVKC 180
                            L+  P+  +           +N    E  + +V    +     
Sbjct: 243 KKFYGYNRQHFSGQRGNLNNGPTCQLCGKYGHSALVCYNRFNKEFSSPLVQNRNE----- 302

Query: 181 APNIDTLSFGQNPATFITTHNPNPFVATLETIGDFNWYDGSGATNHVTADFNHIANPTDY 211
             +    S   NPA F++T N  PF AT +T+ D NWY  SGATNHVT + +++ NPT+Y
Sbjct: 303 --HSSNGSVSPNPAVFVSTQNATPF-ATPDTVVDPNWYIDSGATNHVTRECSNMTNPTEY 362

BLAST of CaUC09G170470 vs. ExPASy TrEMBL
Match: A0A5D3C373 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G002430 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 1.5e-23
Identity = 96/293 (32.76%), Postives = 133/293 (45.39%), Query Frame = 0

Query: 5   VVVQLMGFENAQSLWEAIHAPLSVQSRAEEDCLRHVFQQT-------------------- 64
           + +QLMGF NA+ LWEA      VQSRAEED LR +FQ T                    
Sbjct: 45  IAIQLMGFTNAKDLWEATQDLFGVQSRAEEDFLRQMFQTTRKVRASYEDYLRIMKTNSDK 104

Query: 65  -------------FSQVLLRLDEEYNPVLV--------------SKLLSFEKRLEHQNTT 124
                         SQ LL LDE YNPV+               S+LL+FEKRLEHQ+T 
Sbjct: 105 LGQAGSPVPKRAFISQALLGLDEVYNPVIAVIQGKPEISWIDMQSELLTFEKRLEHQDTQ 164

Query: 125 KSTVSFGHNVTVNLAFNRNPS-LSKSPSSAIHNLMVDETEAR------------------ 184
           K+T +   NV VN+A NRN S   K  +   H    + ++ +                  
Sbjct: 165 KNTENIIQNV-VNIAQNRNSSDFRKYSNHQFHGNNRNNSQGQRGGFNIGRGRGKGRGNKP 224

Query: 185 ------------VVAGETDRHVKCAPNI-------DTLSFGQNPATFITTHNPNPFVATL 213
                       +V          +P +          S   N    +T  + N F AT 
Sbjct: 225 TCQVCEKYGHSALVCYNRFNKEFLSPLVQDRGAQSSNFSKHSNLTVLVTGQSVNQF-ATA 284

BLAST of CaUC09G170470 vs. ExPASy TrEMBL
Match: A0A6J1DCW4 (uncharacterized protein LOC111019598 OS=Momordica charantia OX=3673 GN=LOC111019598 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 3.4e-20
Identity = 87/270 (32.22%), Postives = 120/270 (44.44%), Query Frame = 0

Query: 1   MTLKVVVQLMGFENAQSLWEAIHAPLSVQSRAEEDCLRHVFQQT---------------- 60
           M   V +Q+MGF  ++ LW A+     VQSRAE D L+ VFQQT                
Sbjct: 118 MAADVAMQVMGFSTSRELWTAVQELFGVQSRAEVDYLKQVFQQTCKGSLQMIEYLKLMKS 177

Query: 61  -----------------FSQVLLRLDEEYNPVLV--------------SKLLSFEKRLEH 120
                             SQVL  LDEEYNP++V              ++LL++EKRLE+
Sbjct: 178 HADNLALAGSSVSVRDLVSQVLTGLDEEYNPIVVAVQGKVNLSWSEMHAELLTYEKRLEY 237

Query: 121 QNTTKSTVSFGHNVTVNL------AFNRNPSLSKSPSSAIHNLMVDETEARVVAGETDRH 180
           QN+ KS +      T ++      +F  N   +   +S   N        R   G+ +R 
Sbjct: 238 QNSLKSGIPINQTQTPSVNYVDGRSFQTNQRTNNGNNSHGSNTHRGGGYQRGSFGQRNRG 297

Query: 181 VKCAP----NIDTLSFGQNPATFITTHNPNPFVATLETIGDFNWYDGSGATNHVTADFNH 214
               P    N    + G N       H+ +  V T ET+ D +WY  SGAT+HVTA+ N+
Sbjct: 298 RGPQPTQHKNFTPSNSGPN---VFAAHHTSTTVTTPETVIDPSWYADSGATSHVTANPNN 357

BLAST of CaUC09G170470 vs. ExPASy TrEMBL
Match: A0A5D3CPY2 (Retrotransposon protein, putative, Ty1-copia subclass OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold90G00160 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 5.7e-20
Identity = 82/219 (37.44%), Postives = 103/219 (47.03%), Query Frame = 0

Query: 1   MTLKVVVQLMGFENAQSLWEAIHAPLSVQSRAEEDCLRHVFQQT-------------FSQ 60
           MT +V  QLMGF  A+ LWEAI     VQSR EED LRH FQ T                
Sbjct: 24  MTAEVAFQLMGFNIAKDLWEAIQDLFGVQSRVEEDFLRHGFQTTRKGNSKMEDYLRIMKT 83

Query: 61  VLLRLDEEYNPV----LVSKLLSFEKRLEHQNTTKSTVSFGHNVTVNLAFNRNPSLSKSP 120
            +  L +E   +    + S+LL FEKRLEHQN+ K   S GH  T              P
Sbjct: 84  NVENLGQEKPDISWLDMQSELLIFEKRLEHQNSNKK--SKGHTFT--------------P 143

Query: 121 SSAIHNLMVDETEARVVAGETDRHVKCAPNIDTLSFGQNPATFITTHNPNPFVATLETIG 180
           S++                                  QN   F+TT+N N FV T ET+ 
Sbjct: 144 SNS---------------------------------NQNLTAFVTTYNSNSFV-TPETVI 192

Query: 181 DFNWYDGSGATNHVTADFNHIANPTDYTGNEQVTVGNGE 203
           D NWY  +GATNHVTAD+++++NP  Y+G E V VGN +
Sbjct: 204 DSNWYVDNGATNHVTADYSNLSNPLKYSGIEHVIVGNAQ 192

BLAST of CaUC09G170470 vs. ExPASy TrEMBL
Match: A0A1S4E1V2 (uncharacterized protein LOC107991581 isoform X3 OS=Cucumis melo OX=3656 GN=LOC107991581 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 2.9e-19
Identity = 87/242 (35.95%), Postives = 112/242 (46.28%), Query Frame = 0

Query: 1   MTLKVVVQLMGFENAQSLWEAIHAPLSVQSRAEEDCLRHVFQQTFSQVLLRLDEEYNPVL 60
           MT  V +QLMGF N + LW+A      VQSRAEED LR + Q T       LDE YN V+
Sbjct: 123 MTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRK----GLDEVYNLVI 182

Query: 61  V--------------SKLLSFEKRLEHQNTTKS-----TVSFGHNVTVNLAFN--RNPS- 120
           V              SKLL FEKRL+HQNT K      T S   N+    A N  RN S 
Sbjct: 183 VVIQGKPDISWLDMQSKLLIFEKRLKHQNTQKKNTGNITQSPALNMAQRFALNGQRNQSN 242

Query: 121 -----------------LSKSPSSAI-----------HNLMVDETEARVVAGETDRHVKC 180
                            L+  P+  +           +N    E  + +V    +     
Sbjct: 243 KKFYGYNRQHFSGQRGNLNNGPTCQLCGKYGHSALVCYNRFNKEFSSPLVQNRNE----- 302

Query: 181 APNIDTLSFGQNPATFITTHNPNPFVATLETIGDFNWYDGSGATNHVTADFNHIANPTDY 193
             +    S   NPA F++T N  PF AT +T+ D NWY  SGATNHVT + +++ NPT+Y
Sbjct: 303 --HSSNGSVSPNPAVFVSTQNATPF-ATPDTVVDPNWYIDSGATNHVTRECSNMTNPTEY 352

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_016902197.12.1e-2437.69PREDICTED: uncharacterized protein LOC107991581 isoform X1 [Cucumis melo][more]
TYK05754.13.0e-2332.76Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... [more]
XP_038905164.12.4e-2030.07uncharacterized protein LOC120091275 isoform X4 [Benincasa hispida][more]
XP_038905161.14.1e-2029.73uncharacterized protein LOC120091275 isoform X1 [Benincasa hispida][more]
XP_022151683.17.0e-2032.22uncharacterized protein LOC111019598 [Momordica charantia][more]
Match NameE-valueIdentityDescription
Q94HW23.3e-0433.33Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... [more]
Match NameE-valueIdentityDescription
A0A1S4E1U61.0e-2437.69uncharacterized protein LOC107991581 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A5D3C3731.5e-2332.76Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... [more]
A0A6J1DCW43.4e-2032.22uncharacterized protein LOC111019598 OS=Momordica charantia OX=3673 GN=LOC111019... [more]
A0A5D3CPY25.7e-2037.44Retrotransposon protein, putative, Ty1-copia subclass OS=Cucumis melo var. makuw... [more]
A0A1S4E1V22.9e-1935.95uncharacterized protein LOC107991581 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC09G170470.1CaUC09G170470.1mRNA