CaUC09G170330 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC09G170330
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	ankyrin repeat-containing protein BDA1-like
Location	Ciama_Chr09: 15871229 .. 15871628 (+)
RNA-Seq Expression	CaUC09G170330
Synteny	CaUC09G170330

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGAGGTTGAAACCGTCCTTAGCCAAGAAGCTTAACCCAAAGGGCCATAGCCCTATTCGCCTAGCAATGAAAAACAATGAAACTGTGATCGTGTTTCGACTTGCCGAGGTCGATCGAGACCTCGTAAGCTTGCACGGGTAAAGGGGTTTAACTCCAATGCATATTGCAGCTTCAAGAGGGACGATGGAAGATAACTTCTTGGCTAAAGTTTTGGATTCATATCCAGAATCTATAATTGAACTTTTCTAAGGAATCTGCTCTTCATATTGCTGTTAAAAAAGACAAAATTGAAGCTTTGAAAATCCTATTGAAGTGGACCAAGCAAGCCAGCATGAAGTCAATACTAAATTGGAGTGACGATAAAGGAAACAACAATCATGCATCTTGCAGCAGCTGA

mRNA sequence

ATGTTGAGGTTGAAACCGTCCTTAGCCAAGAAGCTTAACCCAAAGGGCCATAGCCCTATTCGCCTAGCAATGAAAAACAATGAAACTGTGATCGTGTTTCGACTTGCCGAGGTCGATCGAGACCTCGAATCTGCTCTTCATATTGCTGTTAAAAAAGACAAAATTGAAGCTTTGAAAATCCTATTGAAGTGGACCAAGCAAGCCAGCATGAAGTCAATACTAAATTGGAGTGACGATAAAGGAAACAACAATCATGCATCTTGCAGCAGCTGA

Coding sequence (CDS)

ATGTTGAGGTTGAAACCGTCCTTAGCCAAGAAGCTTAACCCAAAGGGCCATAGCCCTATTCGCCTAGCAATGAAAAACAATGAAACTGTGATCGTGTTTCGACTTGCCGAGGTCGATCGAGACCTCGAATCTGCTCTTCATATTGCTGTTAAAAAAGACAAAATTGAAGCTTTGAAAATCCTATTGAAGTGGACCAAGCAAGCCAGCATGAAGTCAATACTAAATTGGAGTGACGATAAAGGAAACAACAATCATGCATCTTGCAGCAGCTGA

Protein sequence

MLRLKPSLAKKLNPKGHSPIRLAMKNNETVIVFRLAEVDRDLESALHIAVKKDKIEALKILLKWTKQASMKSILNWSDDKGNNNHASCSS

Homology

[Close]

BLAST of CaUC09G170330 vs. NCBI nr
Match: XP_038886825.1 (ankyrin repeat-containing protein BDA1-like isoform X1 [Benincasa hispida] >XP_038886826.1 ankyrin repeat-containing protein BDA1-like isoform X1 [Benincasa hispida] >XP_038886827.1 ankyrin repeat-containing protein BDA1-like isoform X1 [Benincasa hispida] >XP_038886829.1 ankyrin repeat-containing protein BDA1-like isoform X1 [Benincasa hispida])

HSP 1 Score: 115.2 bits (287), Expect = 3.0e-22
Identity = 69/125 (55.20%), Postives = 76/125 (60.80%), Query Frame = 0


Query: 1   MLRLKPSLAKKLNPKGHSPIRLAMKNNETVIVFRLAEVDRDL------------------ 60
           M+RLKPSLAKKLNPKG+SPI LAMKN+ T  VFRLA+VDRDL                  
Sbjct: 56  MMRLKPSLAKKLNPKGYSPIHLAMKNDRTETVFRLADVDRDLVTLHGKKGLTPLHIAASK 115

Query: 61  ------------------------ESALHIAVKKDKIEALKILLKWTKQASMKSILNWSD 84
                                   ESALHIAVKKDKI AL ILL+WTKQA+M SILNWSD
Sbjct: 116 GKDKFLAKFLISYPESIKGLTDREESALHIAVKKDKIGALGILLEWTKQANMNSILNWSD 175

[Close]

BLAST of CaUC09G170330 vs. NCBI nr
Match: XP_038886831.1 (ankyrin repeat-containing protein BDA1-like isoform X3 [Benincasa hispida] >XP_038886832.1 ankyrin repeat-containing protein BDA1-like isoform X3 [Benincasa hispida])

HSP 1 Score: 115.2 bits (287), Expect = 3.0e-22
Identity = 69/125 (55.20%), Postives = 76/125 (60.80%), Query Frame = 0


Query: 1   MLRLKPSLAKKLNPKGHSPIRLAMKNNETVIVFRLAEVDRDL------------------ 60
           M+RLKPSLAKKLNPKG+SPI LAMKN+ T  VFRLA+VDRDL                  
Sbjct: 56  MMRLKPSLAKKLNPKGYSPIHLAMKNDRTETVFRLADVDRDLVTLHGKKGLTPLHIAASK 115

Query: 61  ------------------------ESALHIAVKKDKIEALKILLKWTKQASMKSILNWSD 84
                                   ESALHIAVKKDKI AL ILL+WTKQA+M SILNWSD
Sbjct: 116 GKDKFLAKFLISYPESIKGLTDREESALHIAVKKDKIGALGILLEWTKQANMNSILNWSD 175

[Close]

BLAST of CaUC09G170330 vs. NCBI nr
Match: XP_038886833.1 (ankyrin repeat-containing protein BDA1-like isoform X4 [Benincasa hispida] >XP_038886834.1 ankyrin repeat-containing protein BDA1-like isoform X4 [Benincasa hispida])

HSP 1 Score: 115.2 bits (287), Expect = 3.0e-22
Identity = 69/125 (55.20%), Postives = 76/125 (60.80%), Query Frame = 0


Query: 1   MLRLKPSLAKKLNPKGHSPIRLAMKNNETVIVFRLAEVDRDL------------------ 60
           M+RLKPSLAKKLNPKG+SPI LAMKN+ T  VFRLA+VDRDL                  
Sbjct: 56  MMRLKPSLAKKLNPKGYSPIHLAMKNDRTETVFRLADVDRDLVTLHGKKGLTPLHIAASK 115

Query: 61  ------------------------ESALHIAVKKDKIEALKILLKWTKQASMKSILNWSD 84
                                   ESALHIAVKKDKI AL ILL+WTKQA+M SILNWSD
Sbjct: 116 GKDKFLAKFLISYPESIKGLTDREESALHIAVKKDKIGALGILLEWTKQANMNSILNWSD 175

[Close]

BLAST of CaUC09G170330 vs. NCBI nr
Match: XP_038886830.1 (ankyrin repeat-containing protein BDA1-like isoform X2 [Benincasa hispida])

HSP 1 Score: 115.2 bits (287), Expect = 3.0e-22
Identity = 69/125 (55.20%), Postives = 76/125 (60.80%), Query Frame = 0


Query: 1   MLRLKPSLAKKLNPKGHSPIRLAMKNNETVIVFRLAEVDRDL------------------ 60
           M+RLKPSLAKKLNPKG+SPI LAMKN+ T  VFRLA+VDRDL                  
Sbjct: 1   MMRLKPSLAKKLNPKGYSPIHLAMKNDRTETVFRLADVDRDLVTLHGKKGLTPLHIAASK 60

Query: 61  ------------------------ESALHIAVKKDKIEALKILLKWTKQASMKSILNWSD 84
                                   ESALHIAVKKDKI AL ILL+WTKQA+M SILNWSD
Sbjct: 61  GKDKFLAKFLISYPESIKGLTDREESALHIAVKKDKIGALGILLEWTKQANMNSILNWSD 120

[Close]

BLAST of CaUC09G170330 vs. NCBI nr
Match: XP_022971877.1 (ankyrin repeat-containing protein BDA1-like [Cucurbita maxima])

HSP 1 Score: 97.4 bits (241), Expect = 6.5e-17
Identity = 56/125 (44.80%), Postives = 72/125 (57.60%), Query Frame = 0


Query: 1   MLRLKPSLAKKLNPKGHSPIRLAMKNNETVIVFRLAEVDRDL------------------ 60
           ++RLKPSLAKKLNP+G+SPI LA++NN+T  V RL ++DRDL                  
Sbjct: 56  IMRLKPSLAKKLNPEGYSPIHLALQNNQTKTVLRLVDIDRDLVCIQGRDGLTPLHIAASG 115

Query: 61  ------------------------ESALHIAVKKDKIEALKILLKWTKQASMKSILNWSD 84
                                   ESALHIAVK++ IE++KILL+W +Q  M SILNW D
Sbjct: 116 GMDDILAKFLTSCPKSIKQLTNRNESALHIAVKREDIESVKILLQWIQQTCMTSILNWCD 175

[Close]

BLAST of CaUC09G170330 vs. ExPASy TrEMBL
Match: A0A6J1I835 (ankyrin repeat-containing protein BDA1-like OS=Cucurbita maxima OX=3661 GN=LOC111471792 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 3.1e-17
Identity = 56/125 (44.80%), Postives = 72/125 (57.60%), Query Frame = 0


Query: 1   MLRLKPSLAKKLNPKGHSPIRLAMKNNETVIVFRLAEVDRDL------------------ 60
           ++RLKPSLAKKLNP+G+SPI LA++NN+T  V RL ++DRDL                  
Sbjct: 56  IMRLKPSLAKKLNPEGYSPIHLALQNNQTKTVLRLVDIDRDLVCIQGRDGLTPLHIAASG 115

Query: 61  ------------------------ESALHIAVKKDKIEALKILLKWTKQASMKSILNWSD 84
                                   ESALHIAVK++ IE++KILL+W +Q  M SILNW D
Sbjct: 116 GMDDILAKFLTSCPKSIKQLTNRNESALHIAVKREDIESVKILLQWIQQTCMTSILNWCD 175

[Close]

BLAST of CaUC09G170330 vs. ExPASy TrEMBL
Match: A0A6J1I885 (ankyrin repeat-containing protein BDA1-like OS=Cucurbita maxima OX=3661 GN=LOC111470572 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 3.1e-17
Identity = 56/125 (44.80%), Postives = 72/125 (57.60%), Query Frame = 0


Query: 1   MLRLKPSLAKKLNPKGHSPIRLAMKNNETVIVFRLAEVDRDL------------------ 60
           ++RLKPSLAKKLNP+G+SPI LA++NN+T  V RL ++DRDL                  
Sbjct: 56  IMRLKPSLAKKLNPEGYSPIHLALQNNQTKTVLRLVDIDRDLVCIQGRDGLTPLHIAASG 115

Query: 61  ------------------------ESALHIAVKKDKIEALKILLKWTKQASMKSILNWSD 84
                                   ESALHIAVK++ IE++KILL+W +Q  M SILNW D
Sbjct: 116 GMDDILAKFLTSCPKSIKQLTNRNESALHIAVKREDIESVKILLQWIQQTCMTSILNWCD 175

[Close]

BLAST of CaUC09G170330 vs. ExPASy TrEMBL
Match: A0A6J1IAU0 (ankyrin repeat-containing protein BDA1-like OS=Cucurbita maxima OX=3661 GN=LOC111471791 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 3.1e-17
Identity = 56/125 (44.80%), Postives = 72/125 (57.60%), Query Frame = 0


Query: 1   MLRLKPSLAKKLNPKGHSPIRLAMKNNETVIVFRLAEVDRDL------------------ 60
           ++RLKPSLAKKLNP+G+SPI LA++NN+T  V RL ++DRDL                  
Sbjct: 56  IMRLKPSLAKKLNPEGYSPIHLALQNNQTKTVLRLVDIDRDLVCIQGRDGLTPLHIAASG 115

Query: 61  ------------------------ESALHIAVKKDKIEALKILLKWTKQASMKSILNWSD 84
                                   ESALHIAVK++ IE++KILL+W +Q  M SILNW D
Sbjct: 116 GMDDILAKFLTSCPKSIKQLTNRNESALHIAVKREDIESVKILLQWIQQTCMTSILNWCD 175

[Close]

BLAST of CaUC09G170330 vs. ExPASy TrEMBL
Match: A0A6J1I355 (ankyrin repeat-containing protein BDA1-like OS=Cucurbita maxima OX=3661 GN=LOC111470571 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 3.1e-17
Identity = 56/125 (44.80%), Postives = 72/125 (57.60%), Query Frame = 0


Query: 1   MLRLKPSLAKKLNPKGHSPIRLAMKNNETVIVFRLAEVDRDL------------------ 60
           ++RLKPSLAKKLNP+G+SPI LA++NN+T  V RL ++DRDL                  
Sbjct: 56  IMRLKPSLAKKLNPEGYSPIHLALQNNQTKTVLRLVDIDRDLVCIQGRDGLTPLHIAASG 115

Query: 61  ------------------------ESALHIAVKKDKIEALKILLKWTKQASMKSILNWSD 84
                                   ESALHIAVK++ IE++KILL+W +Q  M SILNW D
Sbjct: 116 GMDDILAKFLTSCPKSIKQLTNRNESALHIAVKREDIESVKILLQWIQQTCMTSILNWCD 175

[Close]

BLAST of CaUC09G170330 vs. ExPASy TrEMBL
Match: A0A6J1I6V2 (ankyrin repeat-containing protein BDA1-like OS=Cucurbita maxima OX=3661 GN=LOC111470533 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.6e-16
Identity = 55/125 (44.00%), Postives = 70/125 (56.00%), Query Frame = 0


Query: 1   MLRLKPSLAKKLNPKGHSPIRLAMKNNETVIVFRLAEVDRDL------------------ 60
           ++RLKPSLAKKLNP+G+SPI LA++NN+T  V RL ++DRDL                  
Sbjct: 56  IMRLKPSLAKKLNPEGYSPIHLALQNNQTKTVLRLVDIDRDLVCIQGREGLTPLHIAASG 115

Query: 61  ------------------------ESALHIAVKKDKIEALKILLKWTKQASMKSILNWSD 84
                                   ESALHI VK + IE++KILL+W +Q  M SILNW D
Sbjct: 116 GMDDILAKFLTSCPKSIKQLTNRNESALHIVVKSEDIESVKILLQWIQQTCMTSILNWCD 175

[Close]

BLAST of CaUC09G170330 vs. TAIR 10
Match: AT4G10720.1 (Ankyrin repeat family protein )

HSP 1 Score: 48.5 bits (114), Expect = 3.2e-06
Identity = 40/131 (30.53%), Postives = 56/131 (42.75%), Query Frame = 0


Query: 1   MLRLKPSLAKKLNPKGHSPIRLAMKNNETVIVFRLAEVDRDL------------------ 60
           ++ LKPS A+KLN  G SP+ LA++  +T +V  L +VD DL                  
Sbjct: 56  LMNLKPSFARKLNTYGLSPLHLAIEEGQTRLVLSLLKVDSDLVRLRGREGMTPFHQVVRR 115

Query: 61  ------------------------ESALHIAVKKDKIEALKILLKWT---KQASMKSI-- 83
                                   E+ALHIAV  D+ E L++LL W    +Q   +S+  
Sbjct: 116 GETDLMTEFLLACPGCIKDANVNGETALHIAVSNDRYEELEVLLGWVQRLRQTDAESLEM 175

[Close]

BLAST of CaUC09G170330 vs. TAIR 10
Match: AT4G10720.2 (Ankyrin repeat family protein )

HSP 1 Score: 48.5 bits (114), Expect = 3.2e-06
Identity = 40/131 (30.53%), Postives = 56/131 (42.75%), Query Frame = 0


Query: 1   MLRLKPSLAKKLNPKGHSPIRLAMKNNETVIVFRLAEVDRDL------------------ 60
           ++ LKPS A+KLN  G SP+ LA++  +T +V  L +VD DL                  
Sbjct: 56  LMNLKPSFARKLNTYGLSPLHLAIEEGQTRLVLSLLKVDSDLVRLRGREGMTPFHQVVRR 115

Query: 61  ------------------------ESALHIAVKKDKIEALKILLKWT---KQASMKSI-- 83
                                   E+ALHIAV  D+ E L++LL W    +Q   +S+  
Sbjct: 116 GETDLMTEFLLACPGCIKDANVNGETALHIAVSNDRYEELEVLLGWVQRLRQTDAESLEM 175

[Close]

BLAST of CaUC09G170330 vs. TAIR 10
Match: AT4G11000.1 (Ankyrin repeat family protein )

HSP 1 Score: 47.0 bits (110), Expect = 9.4e-06
Identity = 30/82 (36.59%), Postives = 40/82 (48.78%), Query Frame = 0


Query: 1   MLRLKPSLAKKLNPKGHSPIRLAMKNNETVIVFRLAEVDRDLESALHIAVKKDKIEALKI 60
           ++ LKPSLA KLN  G SP+ LA++NN                   HI           +
Sbjct: 93  LMTLKPSLALKLNVSGFSPLHLALQNN-------------------HIQT---------V 146

Query: 61  LLKWTKQASMKSILNWSDDKGN 83
           LL W K+A+ K IL+W D+ GN
Sbjct: 153 LLGWIKRANRKEILDWKDEDGN 146

[Close]

BLAST of CaUC09G170330 vs. TAIR 10
Match: AT1G14480.1 (Ankyrin repeat family protein )

HSP 1 Score: 43.9 bits (102), Expect = 7.9e-05
Identity = 31/113 (27.43%), Postives = 51/113 (45.13%), Query Frame = 0


Query: 1   MLRLKPSLAKKLNPKGHSPIRLAMKNNET--------------------------VIVFR 60
           ML LKPS A+KLN  G+SP+ LA++  ++                          ++V R
Sbjct: 56  MLNLKPSFARKLNTSGYSPLHLAVEKEQSDFVSHMLWHDGGLSRVKGRNGVTPFHLLVIR 115

Query: 61  ----------------LAEVDRDLESALHIAVKKDKIEALKILLKWTKQASMK 72
                           + +V+ D ++ALH+AV  D+ E L++L  W ++ S K
Sbjct: 116 GDDDLVAECLITSPECIEDVNVDRQNALHLAVMNDRFEVLQVLTGWIQRMSQK 168

[Close]

BLAST of CaUC09G170330 vs. TAIR 10
Match: AT5G54620.1 (Ankyrin repeat family protein )

HSP 1 Score: 42.7 bits (99), Expect = 1.8e-04
Identity = 35/131 (26.72%), Postives = 52/131 (39.69%), Query Frame = 0


Query: 1   MLRLKPSLAKKLNPKGHSPIRLAMKNNETVIVFRLAEVDRDL------------------ 60
           ++ LKP+ AKKLN  G SP+ LA++N++  +   L +++ DL                  
Sbjct: 56  LMVLKPTFAKKLNSDGVSPLHLAVENHQVQLALELVKINPDLVLVAGRKGMTPLHLVVKK 115

Query: 61  ------------------------ESALHIAVKKDKIEALKILLKWTKQASMKS------ 83
                                   E+ALHIAV  D+ E LK+L  W  +           
Sbjct: 116 GDANLLTEFLLACPESIKDTNVNGETALHIAVMNDRYEELKVLTGWIHRLHKSDAASTEI 175

The following BLAST results are available for this feature:

BLAST of CaUC09G170330 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038886825.1	3.0e-22	55.20	ankyrin repeat-containing protein BDA1-like isoform X1 [Benincasa hispida] >XP_0...	[more]
XP_038886831.1	3.0e-22	55.20	ankyrin repeat-containing protein BDA1-like isoform X3 [Benincasa hispida] >XP_0...	[more]
XP_038886833.1	3.0e-22	55.20	ankyrin repeat-containing protein BDA1-like isoform X4 [Benincasa hispida] >XP_0...	[more]
XP_038886830.1	3.0e-22	55.20	ankyrin repeat-containing protein BDA1-like isoform X2 [Benincasa hispida]	[more]
XP_022971877.1	6.5e-17	44.80	ankyrin repeat-containing protein BDA1-like [Cucurbita maxima]	[more]

BLAST of CaUC09G170330 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CaUC09G170330 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I835	3.1e-17	44.80	ankyrin repeat-containing protein BDA1-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1I885	3.1e-17	44.80	ankyrin repeat-containing protein BDA1-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1IAU0	3.1e-17	44.80	ankyrin repeat-containing protein BDA1-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1I355	3.1e-17	44.80	ankyrin repeat-containing protein BDA1-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1I6V2	1.6e-16	44.00	ankyrin repeat-containing protein BDA1-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]

BLAST of CaUC09G170330 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G10720.1	3.2e-06	30.53	Ankyrin repeat family protein	[more]
AT4G10720.2	3.2e-06	30.53	Ankyrin repeat family protein	[more]
AT4G11000.1	9.4e-06	36.59	Ankyrin repeat family protein	[more]
AT1G14480.1	7.9e-05	27.43	Ankyrin repeat family protein	[more]
AT5G54620.1	1.8e-04	26.72	Ankyrin repeat family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036770	Ankyrin repeat-containing domain superfamily	GENE3D	1.25.40.20		coord: 1..84 e-value: 1.2E-7 score: 33.1
IPR036770	Ankyrin repeat-containing domain superfamily	SUPERFAMILY	48403	Ankyrin repeat	coord: 8..81
None	No IPR available	PANTHER	PTHR24128:SF42	ANKYRIN REPEAT FAMILY PROTEIN	coord: 43..83
None	No IPR available	PANTHER	PTHR24128	HOMEOBOX PROTEIN WARIAI	coord: 1..42
None	No IPR available	PANTHER	PTHR24128:SF42	ANKYRIN REPEAT FAMILY PROTEIN	coord: 1..42
None	No IPR available	PANTHER	PTHR24128	HOMEOBOX PROTEIN WARIAI	coord: 43..83

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC09G170330.1	CaUC09G170330.1	mRNA