CaUC09G166560 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC09G166560
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	RING-type domain-containing protein
Location	Ciama_Chr09: 8987594 .. 8994423 (+)
RNA-Seq Expression	CaUC09G166560
Synteny	CaUC09G166560

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGGTGGTCGCCGGAGGATTACGCTTTACGATCAGATGTTAGCGGTCAGCGACGGCAGAGAGCTCGCCGGCGGTTTTACACTCAACGACGTTTTGACCATTCAAAAGAGAGCCTCGCCGACCCCCTCGCCGGCGGTGAGATTAAACGGCCGGACTTTGCTTGATATTATAAGAGACGACGTAGGAAAATCCCCCGTTGGTAATCGAGAGAGGAAATCTTGGAAGTTTTTGAAAGATCGTCTGCGTCTGAACCTCAGATCTCAAATTCCGCCGCCGAATTCGTTTCGTTTACCCGGTTTTTCGTCGGCGGAGATGACGCCAAACGAAGAACAGTCGACGGAATCGACCACCACTCGCGCCGTCTCCGCCGCCCCATCTCTCCGGCAAATATCACGGCGGAATTCCACGCGGTTGGTGCCGCCATCGTCTGAGGCTACAAATTCCGACGACGCTCCAGATAACAACAATTCCGCCACCACAGCCGCTGTCGGAGGTGGCCGGAGCCTCCTCAGGCCGCAAATGTCGCGGCACAACTCGACGAGAATCTCGGTAGAACGAAGCGAGAGTTTCACGGACTTGACGGAGCCAGCGCGTGAGGGCACGCGCCGCCTCTCTGCTGCGCTGGCGGAGGAAAGATCGATGTCAGCTAGAGAAGCGGTGGCTGCCCAAGAAGCCGCCGACGCAGAAGCCACCGCCAATGAAGCAGAACAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATGCAGAATCCGCGCCGGCGCCGGTGAGAATGTCACTGATGGATCTGTTAGAAGAGACGGACAGGCAAATGGGGTTCGAAGGGTCAAGATACAGAATAGAAGATGAAGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAAGTGACGATGAAGTCACCACCGTATGCGGCGGTGGCGGGACGGAACGGAATTGCTGCGTGTGCATGGTGCGTCATAAAGGGGCGGCATTTATCCCCTGCGGTCACACCTTTTGTAGGCTCTGTTCAAGAGAGCTTTGGGTCAGTAGAGGGAACTGTCCACTTTGCAATGGCTTCATTTTGGAGATTCTTGACATCTTCTGATTTTCTCACAAATTAAGATGGAATTTAAACCATTTTTTTCTTTCACTATTTTTTTAATGGCTTCTTGAAATATTTGTGAATACTCCTCTTTGAATGAACTATTTCAAGTTACTTTTTCTAGCCTCATATTATATATCTGTCTGATTATTCTCATTTGGTGGTTTGTGTTTGACAGGGTGGAAATTAAGGGAAAATTCATGAGGTTTTAAGTTGATTCAAATCATATCAAATACATTTAAATACATCTTTTAAATCAAATAGAAATTAATTAATTACTTTGGATTTTTTTTTTTTTTTTTTTAAATTTTCTTTTTCAATTTCCTTTACTTTTAAGATGTGTTTTGGAAGTAAAAGACAACATTGACAAAAAAAATATGGATTTAATTTATGGGGTATTGGTTGGTCCAAGAGATTGAATTTCATAATCCTACTCATGTGACATCCCATTTTTTCTTTCCTTTTTTCAGGATCTGGCCCTCTCATTTCTAACCATTAATAATACTTTTCAAACTTATCACTTTTTTCAAGTTCAGATTCAATGAGCAAATCCCATATATTTTCATTTCCAAAAACATCTTTATTATTATGCATCTTATTTCCAACATTCTCATATATTAGCACATCAAAACGAAATGGGCCAATTATAACTTTAAATCTTCAATTTCATCAAATTAAACCTTTGATTATTACGTAAATATACTTGAGTGATTTTGTTTGAAATTTGCTTAATTTACTGGTTGTGGGTAACTTTCAAATTTAGGTTTGATAATGGAAAAATTGGACCAAGGAAAACTAGTCTAACTTCACAAACCATATGAGAAGATGTGAGTTAGAATGAAGCTACCCCAGATGAGATGACCTTAGGGTTTTTCCAATCCTTTTTCAGATTGAATTTAAGAAGGCATAATCAAGCCACCCAAAGAGGGAATGTAGGAGTCTACAAATAGCCAATCCTACAAAGAAATGGGCCAAGCCTTGGAGGTCGAGGGTGAGGTGGGCAATTGGGATAAATGGCTTAGTTGCCACCTTGTATGATATTTCTTGCATGTTTCAAAGTTTAGATAACATTTTTTTTTTAAAATTTTTTGACATTTTTCCTAAGTCCAAAATTACCTATAACAAATTTTAACAAGGACAATTTAAATCCATATGGTTCAATTTAATAAAATAAAAAGCTTAAATTGAATCGTCCAAATAAATACGGAAAAATGAAGTTTTTTTGTTTTTCTTTTTTCTTTTTGGTTAAAAATAATGAATTAATATGTACAAAAATACTATAAAAAATAAAAAGAAAAGTTACCATTTTGGTTCTTTGTATTTGAGTTGGGTTTTATTATTGCTTAAAATGTATTGATACTATATTTATAAATTACAAAGCTAGTTATAGTCGTTCATTAAATATTAATTGACAATAAACTATTAATAGTTTATTTATGGACATGTTTTATATTAAAGAAGGTTGTATAATTATTGTTATGTAATATTATATAATTTATAATATTTTACATAAAATATATTTTAATTTAAAAAAAAATGTATTGAATTTATAACACGACATAGTGTATTTTCACCAACATGTAAAATAATTAGACTCGACCAATTTCTCCAGTGTTCACTATTGAAGTTTGTACATTTATCGAGAAACTCCATGTTCATCTTTTTCTTTCTTTCTCTTTCCAATATTTTCAATAACTCCACCTGCGACCACTACCGATGACCAACTCCAACAACAATTATCGACGACGACATGCTCTAATGACCAACTACAGCCACAATTACCATCAACAACTATTGTTGACTCACTCCAACAATATGTTTTGACGATCACCTCTGATAACCACCTTTAACAAAGTCCACTTGTGGCAATCATCTCCAACGACCACCTCCATTGTCCAACTCCATGGACTACGACCTCTAGTGCCAACCACATATTGGATACCACTGTGATTGCATCTTCTAATGAAGGCTTTTCCACTTCTTTGTTCGGCACCTAAGCGTTTTACCAACACAGCTAAGTTAGGGCTTGGTGCAATTTTGATATCACTTATTAAGGAAAAAGGATTTTTAGATATCACCACAATGATATGATATTGCCCACTTCGGGTATAAACCATTGTGACTTTACTTTTGGTTTGACCCAAAGGGCCTCATACTGTTGGTGATAGTTATTATCCCTTATATACCAATGATTATCCCCTTATTTGGTCATTGTAGAACTTTGATTGCATTTTGAACACCATCATTCATGCATAACAAATTATAACCTACAATTTGGCATAAGATGTTACAAAAAGCCCCAAACTCCTCCATGACCTACTTTTTTTGTACAGATTAAACTCATACATCCCATTAATGTGAAAGTATATTATAATTATAAAATATATGTGAAGATTTTAAGTTGACATTTCAATTGAGTGTTAAAAAATTAGAAAAATATGTGTGCAACTGAAGGGAAAAAAAAAATTAAGGATTTTTTATTTATTTATATGCATGATACAAAAATACATGTGTACTTCTAAAAAAAATAAATAAAATGCAATCCATACTTTTCTCACAAAAAGATGTATAAAGTTATTGAATAAAAGTATTTCCAAAATAAGTAGTCACAATAAAAGCAAATTATTCGGCCAAACAAAATTACACTAGATGCTATTGAATTTAAAACTTAATTTAGCACTCAAATACAAATTTCTTGACTCAGGAAAAGAAAAATACCTCTGCACCCCAAACAAAAACATATTCAACTCGACACTTTAGAATTTAAAGTGTTTGGATAACTAAATCTGAAAATAATTTTCAAGAAAAAGAATATGAATTATCTGCCAATTAATGTCTATTGAATTCAATGTGAAAATATAAAATAGAATATGGATGAATCAAACAAATTAGAAGTTTGTCTATTTTTGGGTCTTGAGATCGTATTGGAATAAATCGAAGATGATTCAAATGTTGTTAAGTGATGCGAGGTGGAATTTGGAAGAGATTTGGGCTTGGAAGAGATTTGTGGCTTGATTTGGGCTAAAGGTTCCACTAGGTTTAGGATTAGTGTTTTTTCCTTAAAAATAATAATAAAAAAAAAAAACCTCTATTCTTTGTCTTTTAGGTCAACCGTATACCCAATTCTTCTCCTTCGTCTCACGTAGCACCCAGCGCGCACTCACACCTTCGACTTCCAGCCACTTGCTACGCACGTCTGCCATTCGTCGCCGTTGGGGAGGTTATCATCGGTACGTACCCACGGCTCTCCTTTCTCTCTCCTACCGTCTTCTTTCTCTCTCTTCCTCTCGTTAATCTCTCTCTCGATCTGCAGGGTTTCTGCCGCCGAACTTCGCTGCAGGTGAAGCGTGAGTTTCGTCGCAGCCACCGCCTTTTTATCATCTTTCGTTCGGTACCTCTAAAACTACATGCTTTATTGTTTTTTTTCTTTTTTTCCTTTTTTCATAAATGTTCATGAATCTGATGTGAAGTTGAATTGTAATGTTGACTTGCTACTGTAATGATTGTGATTTTTGATGAGTTCATGGTCTAAATCTGCCCTCTTTTGCCAATTTGTTCTTTTGAATGGAGAGTTTCGATGTTTTTTTTTTTAATTATTATTTTTTAAAAATTATTATTATATTAAATTTAGGGTTTTTGGAGTCCTGGAGTTCTGCAGGATGTATTGTTGATTTTCTTAGCATTTGTTCATTCTTCAACATTGGATTATGACCGTAGGTGATTGCTGAAATTATTTTGTTTTGCATCTGTGCGAAATTTGATGAATGAAATGGGATATGGATATTGCTAGGTAATTCGTGAGAGATTGTGAGAAGACAGTCGCCAATTTTAGTGACATTTTGTTTAGGGCAACCCCATGGACCCAACCCAACCCGACCCCTTAATATATGGTTGGGTTGGGTTGTCCTCTCTAATTGGGTTGGAAAGCTGATCAACCCGAAATTTTGGGTTGGTCCAAAATATACCCCTACACCAACCCGACCCAACCTAACCTATGTACACTCCTAACTATAATAAAACAAAATCGAGTTGAGATAGACAGACATATTTGCAATTCATTAAAATTTAAAAAGGTAAAATGGATTTAAAATGTTTTTTAATGATCCTTTTTTTTTTTCAATATATATATAGATATGGATGTAGATGTTGGTATAGATATAGATTAACCTGAAGGGAGTAGGTTAGCATTTTTATTTTTGGGCAAGTTGGAGCAATTTTCTCTTACAATCTATACCCTAAAAGGTGTGTTTTCTCAATTGATAGCTCTGACGGCTTTTCAACCTTTATCAGCTGTCAATCATCGAGCGCAGATAGACTGAAGGTTGGCACCTCAAACCTCCAGTGAAAATGGTAATTCCTTTTTCACTCAAGTTCTGGTGTCCGTTAGTTTAAGGTTTTTGTTACTGTTAATCTTACTTCAGGGCTTAAGCTGTTGCTTCATTTGTTTTTTTCCTTCTCGTATCTCAGATCCTTCACGGTTTCTACAATATTTGGTTTATATATATTGGACTTTGATTTGGGTTTTATTTGGCAGTTATTTTTCTCGTACTTCAAGGATTTGGTGGGCAGAGAGGTGACTGTTGAGTTGAAGAACGACCTAGCAATTAGAGGAACTCTGCATTCTGTAGATCAGTATCTCAACATCAAACTGGAAAACACGAGGGTTGTTGATCAAGACAAATACCCTCACATGGTATCCAATTTTTTTCACATGTATTATATTTTGCAATAAATTTGATCGAATACTTGCACATTCTGATGTCCTGCACTTGTGGCGAGGGTTACTTTGATATTGTTTTTCTCTCTTTAATCGTTACCATCTTTCATAGGCATCCGTTCTCATCTCTGTTTCTTCTGTTCTAATGTTCCTTTGATTCTAATAATTGGAAGGTTCTCTGGCGTGATATATGATGTGTGGTTATGGTTCACAGATTATTTGTACCATCGTCTGTTTTCGTCACCCTAGAGTTTTAATTATATGTATATTGTTTAAATTGAGAATGTTGATATTCTTTTCATCCTTAGCTCTTGGATTTTTCATGGGAGAAAAGTTTCAAGTAATTTTGTTGGTGGTTCCCAAATTTGGTGAAATTTTTAGGTTATCTTGTCGACTGGTTAGAGTTCCTAGCAGTACCGTGACTTTATTTCTTGATTTTCTTATTCATATATTACAAAATTTGAACCTTACAACCTTCTAGGAGAAATAAAGATGTCTTAACCATTGACATCATCGTTATTATTATTTGGGGATTTGGGCGGGAGGGTAAAACGGTTTTCTGTTTGAGTTGTACTTTGTTTCTATTTTTTAAATTGGTGCTTGTATTCTTACCATGCCCTTCATGAATTCTTAGTTAAATTCAAAAAAATAAGAACAATTTTTCTAAAAACTACTTTATGAAGATGGTAGTGGTAAGACATGTTGGCTCTGATTATTTAGGATTGGTATAAACTCTTGTTTTGGCATGATCAGGAAGATCTGTTAAATCAAATTATTTCACAATGTTCTATCCAACCTTCTTAAATTTAATGAGTACCCCTCCCTGCATCCATCCATCACCCATTTTGTAATCTGAACCTGTAATTTATGTTGATGTCATTAGACTAATGGAGTTCAAAATTTCTCATTTCAGCTTTCTGTGAGAAACTGTTTTATCAGGGGATCGGTGGTGAGATATGTTCAACTTCCACCAGATGGTGTTGATATCGAACTGTTGCATGATGCCACAAGACGCGAGGCTCGGGGTGGCTAA

mRNA sequence

ATGGAAGGTGGTCGCCGGAGGATTACGCTTTACGATCAGATGTTAGCGGTCAGCGACGGCAGAGAGCTCGCCGGCGGTTTTACACTCAACGACGTTTTGACCATTCAAAAGAGAGCCTCGCCGACCCCCTCGCCGGCGGTGAGATTAAACGGCCGGACTTTGCTTGATATTATAAGAGACGACGTAGGAAAATCCCCCGTTGGTAATCGAGAGAGGAAATCTTGGAAGTTTTTGAAAGATCGTCTGCGTCTGAACCTCAGATCTCAAATTCCGCCGCCGAATTCGTTTCGTTTACCCGGTTTTTCGTCGGCGGAGATGACGCCAAACGAAGAACAGTCGACGGAATCGACCACCACTCGCGCCGTCTCCGCCGCCCCATCTCTCCGGCAAATATCACGGCGGAATTCCACGCGGTTGGTGCCGCCATCGTCTGAGGCTACAAATTCCGACGACGCTCCAGATAACAACAATTCCGCCACCACAGCCGCTGTCGGAGGTGGCCGGAGCCTCCTCAGGCCGCAAATGTCGCGGCACAACTCGACGAGAATCTCGGTAGAACGAAGCGAGAGTTTCACGGACTTGACGGAGCCAGCGCGTGAGGGCACGCGCCGCCTCTCTGCTGCGCTGGCGGAGGAAAGATCGATGTCAGCTAGAGAAGCGGTGGCTGCCCAAGAAGCCGCCGACGCAGAAGCCACCGCCAATGAAGCAGAACAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATGCAGAATCCGCGCCGGCGCCGGTGAGAATGTCACTGATGGATCTGTTAGAAGAGACGGACAGGCAAATGGGGTTCGAAGGGTCAAGATACAGAATAGAAGATGAAGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAAGTGACGATGAAGTCACCACCGTATGCGGCGGTGGCGGGACGGAACGGAATTGCTGCGTGTGCATGGTGCGTCATAAAGGGGCGGCATTTATCCCCTGCGGTCACACCTTTTGTAGGCTCTGTTCAAGAGAGCTTTGGGTCAACCGTATACCCAATTCTTCTCCTTCGTCTCACGTAGCACCCAGCGCGCACTCACACCTTCGACTTCCAGCCACTTGCTACGCACGTCTGCCATTCGTCGCCGTTGGGGAGGTTATCATCGGGTTTCTGCCGCCGAACTTCGCTGCAGGTGAAGCAGAGGTGACTGTTGAGTTGAAGAACGACCTAGCAATTAGAGGAACTCTGCATTCTGTAGATCAGTATCTCAACATCAAACTGGAAAACACGAGGGTTGTTGATCAAGACAAATACCCTCACATGACTAATGGAGTTCAAAATTTCTCATTTCAGCTTTCTGTGAGAAACTGTTTTATCAGGGGATCGGTGGTGAGATATGTTCAACTTCCACCAGATGGTGTTGATATCGAACTGTTGCATGATGCCACAAGACGCGAGGCTCGGGGTGGCTAA

Coding sequence (CDS)

ATGGAAGGTGGTCGCCGGAGGATTACGCTTTACGATCAGATGTTAGCGGTCAGCGACGGCAGAGAGCTCGCCGGCGGTTTTACACTCAACGACGTTTTGACCATTCAAAAGAGAGCCTCGCCGACCCCCTCGCCGGCGGTGAGATTAAACGGCCGGACTTTGCTTGATATTATAAGAGACGACGTAGGAAAATCCCCCGTTGGTAATCGAGAGAGGAAATCTTGGAAGTTTTTGAAAGATCGTCTGCGTCTGAACCTCAGATCTCAAATTCCGCCGCCGAATTCGTTTCGTTTACCCGGTTTTTCGTCGGCGGAGATGACGCCAAACGAAGAACAGTCGACGGAATCGACCACCACTCGCGCCGTCTCCGCCGCCCCATCTCTCCGGCAAATATCACGGCGGAATTCCACGCGGTTGGTGCCGCCATCGTCTGAGGCTACAAATTCCGACGACGCTCCAGATAACAACAATTCCGCCACCACAGCCGCTGTCGGAGGTGGCCGGAGCCTCCTCAGGCCGCAAATGTCGCGGCACAACTCGACGAGAATCTCGGTAGAACGAAGCGAGAGTTTCACGGACTTGACGGAGCCAGCGCGTGAGGGCACGCGCCGCCTCTCTGCTGCGCTGGCGGAGGAAAGATCGATGTCAGCTAGAGAAGCGGTGGCTGCCCAAGAAGCCGCCGACGCAGAAGCCACCGCCAATGAAGCAGAACAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATGCAGAATCCGCGCCGGCGCCGGTGAGAATGTCACTGATGGATCTGTTAGAAGAGACGGACAGGCAAATGGGGTTCGAAGGGTCAAGATACAGAATAGAAGATGAAGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAAGTGACGATGAAGTCACCACCGTATGCGGCGGTGGCGGGACGGAACGGAATTGCTGCGTGTGCATGGTGCGTCATAAAGGGGCGGCATTTATCCCCTGCGGTCACACCTTTTGTAGGCTCTGTTCAAGAGAGCTTTGGGTCAACCGTATACCCAATTCTTCTCCTTCGTCTCACGTAGCACCCAGCGCGCACTCACACCTTCGACTTCCAGCCACTTGCTACGCACGTCTGCCATTCGTCGCCGTTGGGGAGGTTATCATCGGGTTTCTGCCGCCGAACTTCGCTGCAGGTGAAGCAGAGGTGACTGTTGAGTTGAAGAACGACCTAGCAATTAGAGGAACTCTGCATTCTGTAGATCAGTATCTCAACATCAAACTGGAAAACACGAGGGTTGTTGATCAAGACAAATACCCTCACATGACTAATGGAGTTCAAAATTTCTCATTTCAGCTTTCTGTGAGAAACTGTTTTATCAGGGGATCGGTGGTGAGATATGTTCAACTTCCACCAGATGGTGTTGATATCGAACTGTTGCATGATGCCACAAGACGCGAGGCTCGGGGTGGCTAA

Protein sequence

MEGGRRRITLYDQMLAVSDGRELAGGFTLNDVLTIQKRASPTPSPAVRLNGRTLLDIIRDDVGKSPVGNRERKSWKFLKDRLRLNLRSQIPPPNSFRLPGFSSAEMTPNEEQSTESTTTRAVSAAPSLRQISRRNSTRLVPPSSEATNSDDAPDNNNSATTAAVGGGRSLLRPQMSRHNSTRISVERSESFTDLTEPAREGTRRLSAALAEERSMSAREAVAAQEAADAEATANEAEQEEEEEEEEEDAESAPAPVRMSLMDLLEETDRQMGFEGSRYRIEDEEEEEEEEEEEESDDEVTTVCGGGGTERNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVNRIPNSSPSSHVAPSAHSHLRLPATCYARLPFVAVGEVIIGFLPPNFAAGEAEVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMTNGVQNFSFQLSVRNCFIRGSVVRYVQLPPDGVDIELLHDATRREARGG

Homology

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BLAST of CaUC09G166560 vs. NCBI nr
Match: KAA0026218.1 (nucleolin-like [Cucumis melo var. makuwa] >TYK30738.1 nucleolin-like [Cucumis melo var. makuwa])

HSP 1 Score: 537.0 bits (1382), Expect = 1.7e-148
Identity = 302/349 (86.53%), Postives = 316/349 (90.54%), Query Frame = 0


Query: 1   MEGGRRRITLYDQMLAVSDGRELAGGFTLNDVLTIQKRASPTPSPAVRLNGRTLLDIIRD 60
           MEGGRRRITLYDQMLAVSDGRELA GFTLNDVLTIQKRASP+PSPAVRL+GRTLLDIIRD
Sbjct: 1   MEGGRRRITLYDQMLAVSDGRELASGFTLNDVLTIQKRASPSPSPAVRLHGRTLLDIIRD 60

Query: 61  DVGKSPVGNRERKSWKFLKDRLRLNLRSQIPPPNSFRLPGFSSAEMTPNEEQSTESTTTR 120
           DVGKSPV NRERKSWKFL+DRLRLNLRSQIPPPNS R PGF+SAEM PN+EQS E TTT 
Sbjct: 61  DVGKSPVSNRERKSWKFLRDRLRLNLRSQIPPPNSLRFPGFTSAEMMPNDEQSPEPTTTA 120

Query: 121 AVSAAPSLRQISRRNSTRL---VPPSSEATNSDDAPDNNNSATTAAVGGGRSLLRPQMSR 180
           AVSAAPSLRQISRRNSTR    VPPSSEATNSD +PD NNSA  A+ GGGRSLLRPQMSR
Sbjct: 121 AVSAAPSLRQISRRNSTRFNPSVPPSSEATNSDASPD-NNSAAAASGGGGRSLLRPQMSR 180

Query: 181 HNSTRISVERSESFTDLTEPAREGTRRLSAALAEERSMSAREAVAAQEAADAEATANEAE 240
           HNSTR SVERSESFTDLTEPAREGTRRLSAALAEERSMSAREAVAAQEAADAEA A    
Sbjct: 181 HNSTRFSVERSESFTDLTEPAREGTRRLSAALAEERSMSAREAVAAQEAADAEAIA---- 240

Query: 241 QEEEEEEEEEDAESAPAPVRMSLMDLLEETDRQMGFEGSRYRIEDEEEEEEEEEEEESDD 300
            + EE+EEE++AES PAP+RMSLMDLLEETDRQMGFEGS YRIEDEEEEEEEEEE E  +
Sbjct: 241 -DVEEQEEEQEAESTPAPMRMSLMDLLEETDRQMGFEGSTYRIEDEEEEEEEEEEIE--N 300

Query: 301 EVTTVC---GGGGTERNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVNR 344
           EVTTVC   GGGGTERNCCVCMVRHKGAAFIPCGHTFCRLCSRELWV+R
Sbjct: 301 EVTTVCGGGGGGGTERNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVSR 341

[Close]

BLAST of CaUC09G166560 vs. NCBI nr
Match: XP_008458019.1 (PREDICTED: nucleolin-like [Cucumis melo])

HSP 1 Score: 533.5 bits (1373), Expect = 1.9e-147
Identity = 300/349 (85.96%), Postives = 315/349 (90.26%), Query Frame = 0


Query: 1   MEGGRRRITLYDQMLAVSDGRELAGGFTLNDVLTIQKRASPTPSPAVRLNGRTLLDIIRD 60
           MEGGRRRITLYDQMLAVSDGRELA GFTLNDVLTIQKRASP+PSPAVRL+GRTLLDIIRD
Sbjct: 1   MEGGRRRITLYDQMLAVSDGRELASGFTLNDVLTIQKRASPSPSPAVRLHGRTLLDIIRD 60

Query: 61  DVGKSPVGNRERKSWKFLKDRLRLNLRSQIPPPNSFRLPGFSSAEMTPNEEQSTESTTTR 120
           DVGKSPV NRERKSWKFL+DRLRLNLRSQIPPPNS R PGF+SA+M PN+EQS E TTT 
Sbjct: 61  DVGKSPVSNRERKSWKFLRDRLRLNLRSQIPPPNSLRFPGFTSADMMPNDEQSPEPTTTA 120

Query: 121 AVSAAPSLRQISRRNSTRL---VPPSSEATNSDDAPDNNNSATTAAVGGGRSLLRPQMSR 180
           AVSAAPSLRQISRRNSTR    VPPSSEATNSD +PD NNSA  A+  GGRSLLRPQMSR
Sbjct: 121 AVSAAPSLRQISRRNSTRFNPSVPPSSEATNSDASPD-NNSAAAASGAGGRSLLRPQMSR 180

Query: 181 HNSTRISVERSESFTDLTEPAREGTRRLSAALAEERSMSAREAVAAQEAADAEATANEAE 240
           HNSTR SVERSESFTDLTEPAREGTRRLSAALAEERSMSAREAVAAQEAADAEA A    
Sbjct: 181 HNSTRFSVERSESFTDLTEPAREGTRRLSAALAEERSMSAREAVAAQEAADAEAIA---- 240

Query: 241 QEEEEEEEEEDAESAPAPVRMSLMDLLEETDRQMGFEGSRYRIEDEEEEEEEEEEEESDD 300
            + EE+EEE++AES PAP+RMSLMDLLEETDRQMGFEGS YRIEDEEEEEEEEEE E  +
Sbjct: 241 -DVEEQEEEQEAESTPAPMRMSLMDLLEETDRQMGFEGSTYRIEDEEEEEEEEEEIE--N 300

Query: 301 EVTTVC---GGGGTERNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVNR 344
           EVTTVC   GGGGTERNCCVCMVRHKGAAFIPCGHTFCRLCSRELWV+R
Sbjct: 301 EVTTVCGGGGGGGTERNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVSR 341

[Close]

BLAST of CaUC09G166560 vs. NCBI nr
Match: XP_011659191.1 (uncharacterized protein LOC101222466 [Cucumis sativus])

HSP 1 Score: 489.2 bits (1258), Expect = 4.1e-134
Identity = 279/349 (79.94%), Postives = 298/349 (85.39%), Query Frame = 0


Query: 1   MEGGRRRITLYDQMLAVSDGRELAGGFTLNDVLTIQKRASPTPSPAVRLNGRTLLDIIRD 60
           MEGGRRRITLYDQMLAVSDGR+LAGGFTLNDVL IQKRA P+ SPAVRL+GRTLLDIIRD
Sbjct: 1   MEGGRRRITLYDQMLAVSDGRDLAGGFTLNDVLAIQKRALPSSSPAVRLHGRTLLDIIRD 60

Query: 61  DVGKSPVGNRERKSWKFLKDRLRLNLRSQIPPPNSFRLPGFSSAEMTPNEEQSTESTTTR 120
           DVGKSPV NRER SWKF +DRLRL++RSQIPP NS R PG +SAEM  N+E S E TTT 
Sbjct: 61  DVGKSPVSNRERTSWKFFRDRLRLSIRSQIPPSNSLRFPGLTSAEMMSNDEHSPEPTTTA 120

Query: 121 AVSAAPSLRQISRRNSTRLVP---PSSEATNSDDAPDNNNSATTAAVGGGRSLLRPQMSR 180
           AVSAAPSLRQISRRNSTRL P   PSSEATNS+ +PD NNSA  A+  GGRSLLRPQMSR
Sbjct: 121 AVSAAPSLRQISRRNSTRLNPSVQPSSEATNSNASPD-NNSAAAASGSGGRSLLRPQMSR 180

Query: 181 HNSTRISVERSESFTDLTEPAREGTRRLSAALAEERSMSAREAVAAQEAADAEATANEAE 240
           HNSTR SVERSESFTDLTEP REGTRRLSAALAEERSMSAREAV AQEAADAEAT     
Sbjct: 181 HNSTRFSVERSESFTDLTEPTREGTRRLSAALAEERSMSAREAVTAQEAADAEATV---- 240

Query: 241 QEEEEEEEEEDAESAPAPVRMSLMDLLEETDRQMGFEGSRYRIEDEEEEEEEEEEEESDD 300
            +EEE+++E+ AES PAPVRMSLMDLLEETDRQMGFEGS YRIEDE+EEEE E E     
Sbjct: 241 -DEEEQQQEQVAESTPAPVRMSLMDLLEETDRQMGFEGSTYRIEDEDEEEEIENEVS--- 300

Query: 301 EVTTVCGG---GGTERNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVNR 344
             TTVCGG   GGTE +CCVCMVRHKGAAFIPCGHTFCRLCSRELWV+R
Sbjct: 301 --TTVCGGGGSGGTEPHCCVCMVRHKGAAFIPCGHTFCRLCSRELWVSR 338

[Close]

BLAST of CaUC09G166560 vs. NCBI nr
Match: KAG6575985.1 (hypothetical protein SDJN03_26624, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 470.3 bits (1209), Expect = 2.0e-128
Identity = 268/350 (76.57%), Postives = 297/350 (84.86%), Query Frame = 0


Query: 1   MEGGRRRITLYDQMLAVSDGRELAGGFTLNDVLTIQKRASPTPSPAVRLNGRTLLDIIRD 60
           MEG RRRITLYDQMLAV DGRE A G TLNDVLTI  RASP+PSPAVRLNGRTLLDIIRD
Sbjct: 1   MEGDRRRITLYDQMLAVGDGREFARGLTLNDVLTIHNRASPSPSPAVRLNGRTLLDIIRD 60

Query: 61  DVGKSPVGNRERKSWKFLKDRLRLNLRSQIPPPNSFRLPGFSSAEMTPNEEQSTESTTTR 120
           DVG SPV NRERKSWKFL+DRLRLNLRSQI  PNS R+P FSSAEM PNEE+S+ESTTT 
Sbjct: 61  DVGISPVDNRERKSWKFLRDRLRLNLRSQILSPNSLRIPSFSSAEMMPNEEESSESTTTT 120

Query: 121 AVSAAPSLRQISRRNSTRL---VPPSSEATNSDDAPDNNNSATTAAVGGGRSLLRPQMSR 180
           A  AAPSLRQISRR+S+RL     P SEA NSDD+P+NNNS+T +  G  RSL +PQMSR
Sbjct: 121 A--AAPSLRQISRRSSSRLSLNARPKSEAANSDDSPENNNSSTASGSGSRRSLQKPQMSR 180

Query: 181 HNSTRISVERSESFTDLTEPAREGTRRLSAALAEERSMSAREAVAAQEAADAEATANEAE 240
           H+STR ++ERSESFTDL++PAR+G RRLSAALA ERSMSARE V AQEAADAE TA+E E
Sbjct: 181 HSSTRFTLERSESFTDLSDPARDGPRRLSAALAMERSMSARETVVAQEAADAEITAHEEE 240

Query: 241 QEEEEEEEEEDAE-SAPAPVRMSLMDLLEETDRQMGFEGSRYRIEDEEEEEEEEEEEESD 300
           ++EEE+E+ E+ E SA APVRMSLMDLLEETDR+MG EGSRYRIE+EEEEEEEEEEEE  
Sbjct: 241 EQEEEQEQPEEQESSAAAPVRMSLMDLLEETDRKMGLEGSRYRIEEEEEEEEEEEEEEIH 300

Query: 301 DEVTTVCGGG---GTERNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVNR 344
            +VT   GGG   G ER CCVCMVR+KGAAFIPCGHTFCRLCSRELWV+R
Sbjct: 301 HKVTAKRGGGHSWGAERRCCVCMVRYKGAAFIPCGHTFCRLCSRELWVSR 348

[Close]

BLAST of CaUC09G166560 vs. NCBI nr
Match: KAG7014509.1 (hypothetical protein SDJN02_24687, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 463.8 bits (1192), Expect = 1.9e-126
Identity = 266/352 (75.57%), Postives = 297/352 (84.38%), Query Frame = 0


Query: 1   MEGGRRRITLYDQMLAVSDGRELAGGFTLNDVLTIQKRASPTPSPAVRLNGRTLLDIIRD 60
           MEG RRRITLYDQMLAV DGRE A G TLNDVLTI  RASP+PSPAVRLNGRTLLDIIRD
Sbjct: 1   MEGDRRRITLYDQMLAVGDGREFARGLTLNDVLTIHNRASPSPSPAVRLNGRTLLDIIRD 60

Query: 61  DVGKSPVGNRERKSWKFLKDRLRLNLRSQIPPPNSFRLPGFSSAEMTPNEEQSTESTTTR 120
           DVG SPV NRERKSWKFL+DRLRLNLRSQI  PNS R+P FSSA+M PNEE+S+ESTTT 
Sbjct: 61  DVGISPVDNRERKSWKFLRDRLRLNLRSQILSPNSLRIPSFSSADMMPNEEESSESTTTT 120

Query: 121 AVSAAPSLRQISRRNSTRL---VPPSSEATNSDDAPDNNNSATTAAVGGGRSLLRPQMSR 180
           A  AAPSLRQISRR+S+RL     P SEA NSDD+P+N NS+T +  G  RSL +PQMSR
Sbjct: 121 A--AAPSLRQISRRSSSRLSLNARPKSEAANSDDSPENKNSSTASGSGSRRSLQKPQMSR 180

Query: 181 HNSTRISVERSESFTDLTEPAREGTRRLSAALAEERSMSAREAVAAQEAADAEATANEAE 240
           H+STR ++ERSESFTDL++PAR+G RRLSAALA ERSMSARE V AQEAADAE TA+E E
Sbjct: 181 HSSTRFTLERSESFTDLSDPARDGPRRLSAALAMERSMSARETVVAQEAADAEITAHEEE 240

Query: 241 QEEEEEEEEEDAE-SAPAPVRMSLMDLLEETDRQMGFEGSRYRIEDEEEEEEEEEEEESD 300
           ++EEE+E+ E+ E SA APVRMSLMDLLEETDR+MG EGSRYRIE+EEEEEEEEEEEE +
Sbjct: 241 EQEEEQEQPEEQESSAAAPVRMSLMDLLEETDRKMGLEGSRYRIEEEEEEEEEEEEEEEE 300

Query: 301 --DEVTTVCGGG---GTERNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVNR 344
              +VT   GGG   G ER CCVCMVR+KGAAFIPCGHTFCRLCSRELWV+R
Sbjct: 301 IHHKVTAKRGGGHSWGAERRCCVCMVRYKGAAFIPCGHTFCRLCSRELWVSR 350

[Close]

BLAST of CaUC09G166560 vs. ExPASy Swiss-Prot
Match: Q1H595 (Sm-like protein LSM2 OS=Arabidopsis thaliana OX=3702 GN=LSM2 PE=1 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 2.7e-35
Identity = 76/90 (84.44%), Postives = 78/90 (86.67%), Query Frame = 0


Query: 394 EVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMTNGVQNFSFQLSVRNCFIR 453
           EVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHM          LSVRNCFIR
Sbjct: 14  EVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHM----------LSVRNCFIR 73

Query: 454 GSVVRYVQLPPDGVDIELLHDATRREARGG 484
           GSVVRYVQLP DGVD++LLHDA RREARGG
Sbjct: 74  GSVVRYVQLPKDGVDVDLLHDAARREARGG 93

[Close]

BLAST of CaUC09G166560 vs. ExPASy Swiss-Prot
Match: Q9Y333 (U6 snRNA-associated Sm-like protein LSm2 OS=Homo sapiens OX=9606 GN=LSM2 PE=1 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 8.1e-24
Identity = 58/87 (66.67%), Postives = 65/87 (74.71%), Query Frame = 0


Query: 394 EVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMTNGVQNFSFQLSVRNCFIR 453
           +V VELKNDL+I GTLHSVDQYLNIKL +  V D +KYPHM          LSV+NCFIR
Sbjct: 14  DVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPEKYPHM----------LSVKNCFIR 73

Query: 454 GSVVRYVQLPPDGVDIELLHDATRREA 481
           GSVVRYVQLP D VD +LL DA R+EA
Sbjct: 74  GSVVRYVQLPADEVDTQLLQDAARKEA 90

[Close]

BLAST of CaUC09G166560 vs. ExPASy Swiss-Prot
Match: O35900 (U6 snRNA-associated Sm-like protein LSm2 OS=Mus musculus OX=10090 GN=Lsm2 PE=1 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 8.1e-24
Identity = 58/87 (66.67%), Postives = 65/87 (74.71%), Query Frame = 0


Query: 394 EVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMTNGVQNFSFQLSVRNCFIR 453
           +V VELKNDL+I GTLHSVDQYLNIKL +  V D +KYPHM          LSV+NCFIR
Sbjct: 14  DVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPEKYPHM----------LSVKNCFIR 73

Query: 454 GSVVRYVQLPPDGVDIELLHDATRREA 481
           GSVVRYVQLP D VD +LL DA R+EA
Sbjct: 74  GSVVRYVQLPADEVDTQLLQDAARKEA 90

[Close]

BLAST of CaUC09G166560 vs. ExPASy Swiss-Prot
Match: Q54TF6 (Probable U6 snRNA-associated Sm-like protein LSm2 OS=Dictyostelium discoideum OX=44689 GN=lsm2 PE=3 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 2.9e-21
Identity = 52/88 (59.09%), Postives = 66/88 (75.00%), Query Frame = 0


Query: 394 EVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMTNGVQNFSFQLSVRNCFIR 453
           E+TVELKNDL+I G L SVDQ+LNIKL++ +V ++DKYP+M          +SV+NCFIR
Sbjct: 14  EITVELKNDLSITGLLQSVDQFLNIKLKDIKVNEEDKYPYM----------ISVKNCFIR 73

Query: 454 GSVVRYVQLPPDGVDIELLHDATRREAR 482
           GSVVRYV LP + VD+E L D +R EAR
Sbjct: 74  GSVVRYVHLPAEDVDVETLQDHSRLEAR 91

[Close]

BLAST of CaUC09G166560 vs. ExPASy Swiss-Prot
Match: P38203 (U6 snRNA-associated Sm-like protein LSm2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=LSM2 PE=1 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 1.3e-18
Identity = 50/88 (56.82%), Postives = 59/88 (67.05%), Query Frame = 0


Query: 392 EAEVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMTNGVQNFSFQLSVRNCF 451
           + EV VELKND+ I+GTL SVDQ+LN+KL+N    D+ KYPH+           SVRN F
Sbjct: 12  DQEVVVELKNDIEIKGTLQSVDQFLNLKLDNISCTDEKKYPHLG----------SVRNIF 71

Query: 452 IRGSVVRYVQLPPDGVDIELLHDATRRE 480
           IRGS VRYV L  + VD  LL DATRRE
Sbjct: 72  IRGSTVRYVYLNKNMVDTNLLQDATRRE 89

[Close]

BLAST of CaUC09G166560 vs. ExPASy TrEMBL
Match: A0A5D3E4J3 (Nucleolin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold343G00730 PE=4 SV=1)

HSP 1 Score: 537.0 bits (1382), Expect = 8.3e-149
Identity = 302/349 (86.53%), Postives = 316/349 (90.54%), Query Frame = 0


Query: 1   MEGGRRRITLYDQMLAVSDGRELAGGFTLNDVLTIQKRASPTPSPAVRLNGRTLLDIIRD 60
           MEGGRRRITLYDQMLAVSDGRELA GFTLNDVLTIQKRASP+PSPAVRL+GRTLLDIIRD
Sbjct: 1   MEGGRRRITLYDQMLAVSDGRELASGFTLNDVLTIQKRASPSPSPAVRLHGRTLLDIIRD 60

Query: 61  DVGKSPVGNRERKSWKFLKDRLRLNLRSQIPPPNSFRLPGFSSAEMTPNEEQSTESTTTR 120
           DVGKSPV NRERKSWKFL+DRLRLNLRSQIPPPNS R PGF+SAEM PN+EQS E TTT 
Sbjct: 61  DVGKSPVSNRERKSWKFLRDRLRLNLRSQIPPPNSLRFPGFTSAEMMPNDEQSPEPTTTA 120

Query: 121 AVSAAPSLRQISRRNSTRL---VPPSSEATNSDDAPDNNNSATTAAVGGGRSLLRPQMSR 180
           AVSAAPSLRQISRRNSTR    VPPSSEATNSD +PD NNSA  A+ GGGRSLLRPQMSR
Sbjct: 121 AVSAAPSLRQISRRNSTRFNPSVPPSSEATNSDASPD-NNSAAAASGGGGRSLLRPQMSR 180

Query: 181 HNSTRISVERSESFTDLTEPAREGTRRLSAALAEERSMSAREAVAAQEAADAEATANEAE 240
           HNSTR SVERSESFTDLTEPAREGTRRLSAALAEERSMSAREAVAAQEAADAEA A    
Sbjct: 181 HNSTRFSVERSESFTDLTEPAREGTRRLSAALAEERSMSAREAVAAQEAADAEAIA---- 240

Query: 241 QEEEEEEEEEDAESAPAPVRMSLMDLLEETDRQMGFEGSRYRIEDEEEEEEEEEEEESDD 300
            + EE+EEE++AES PAP+RMSLMDLLEETDRQMGFEGS YRIEDEEEEEEEEEE E  +
Sbjct: 241 -DVEEQEEEQEAESTPAPMRMSLMDLLEETDRQMGFEGSTYRIEDEEEEEEEEEEIE--N 300

Query: 301 EVTTVC---GGGGTERNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVNR 344
           EVTTVC   GGGGTERNCCVCMVRHKGAAFIPCGHTFCRLCSRELWV+R
Sbjct: 301 EVTTVCGGGGGGGTERNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVSR 341

[Close]

BLAST of CaUC09G166560 vs. ExPASy TrEMBL
Match: A0A1S3C6E1 (nucleolin-like OS=Cucumis melo OX=3656 GN=LOC103497559 PE=4 SV=1)

HSP 1 Score: 533.5 bits (1373), Expect = 9.2e-148
Identity = 300/349 (85.96%), Postives = 315/349 (90.26%), Query Frame = 0


Query: 1   MEGGRRRITLYDQMLAVSDGRELAGGFTLNDVLTIQKRASPTPSPAVRLNGRTLLDIIRD 60
           MEGGRRRITLYDQMLAVSDGRELA GFTLNDVLTIQKRASP+PSPAVRL+GRTLLDIIRD
Sbjct: 1   MEGGRRRITLYDQMLAVSDGRELASGFTLNDVLTIQKRASPSPSPAVRLHGRTLLDIIRD 60

Query: 61  DVGKSPVGNRERKSWKFLKDRLRLNLRSQIPPPNSFRLPGFSSAEMTPNEEQSTESTTTR 120
           DVGKSPV NRERKSWKFL+DRLRLNLRSQIPPPNS R PGF+SA+M PN+EQS E TTT 
Sbjct: 61  DVGKSPVSNRERKSWKFLRDRLRLNLRSQIPPPNSLRFPGFTSADMMPNDEQSPEPTTTA 120

Query: 121 AVSAAPSLRQISRRNSTRL---VPPSSEATNSDDAPDNNNSATTAAVGGGRSLLRPQMSR 180
           AVSAAPSLRQISRRNSTR    VPPSSEATNSD +PD NNSA  A+  GGRSLLRPQMSR
Sbjct: 121 AVSAAPSLRQISRRNSTRFNPSVPPSSEATNSDASPD-NNSAAAASGAGGRSLLRPQMSR 180

Query: 181 HNSTRISVERSESFTDLTEPAREGTRRLSAALAEERSMSAREAVAAQEAADAEATANEAE 240
           HNSTR SVERSESFTDLTEPAREGTRRLSAALAEERSMSAREAVAAQEAADAEA A    
Sbjct: 181 HNSTRFSVERSESFTDLTEPAREGTRRLSAALAEERSMSAREAVAAQEAADAEAIA---- 240

Query: 241 QEEEEEEEEEDAESAPAPVRMSLMDLLEETDRQMGFEGSRYRIEDEEEEEEEEEEEESDD 300
            + EE+EEE++AES PAP+RMSLMDLLEETDRQMGFEGS YRIEDEEEEEEEEEE E  +
Sbjct: 241 -DVEEQEEEQEAESTPAPMRMSLMDLLEETDRQMGFEGSTYRIEDEEEEEEEEEEIE--N 300

Query: 301 EVTTVC---GGGGTERNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVNR 344
           EVTTVC   GGGGTERNCCVCMVRHKGAAFIPCGHTFCRLCSRELWV+R
Sbjct: 301 EVTTVCGGGGGGGTERNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVSR 341

[Close]

BLAST of CaUC09G166560 vs. ExPASy TrEMBL
Match: A0A0A0K6R9 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G342770 PE=4 SV=1)

HSP 1 Score: 489.2 bits (1258), Expect = 2.0e-134
Identity = 279/349 (79.94%), Postives = 298/349 (85.39%), Query Frame = 0


Query: 1   MEGGRRRITLYDQMLAVSDGRELAGGFTLNDVLTIQKRASPTPSPAVRLNGRTLLDIIRD 60
           MEGGRRRITLYDQMLAVSDGR+LAGGFTLNDVL IQKRA P+ SPAVRL+GRTLLDIIRD
Sbjct: 1   MEGGRRRITLYDQMLAVSDGRDLAGGFTLNDVLAIQKRALPSSSPAVRLHGRTLLDIIRD 60

Query: 61  DVGKSPVGNRERKSWKFLKDRLRLNLRSQIPPPNSFRLPGFSSAEMTPNEEQSTESTTTR 120
           DVGKSPV NRER SWKF +DRLRL++RSQIPP NS R PG +SAEM  N+E S E TTT 
Sbjct: 61  DVGKSPVSNRERTSWKFFRDRLRLSIRSQIPPSNSLRFPGLTSAEMMSNDEHSPEPTTTA 120

Query: 121 AVSAAPSLRQISRRNSTRLVP---PSSEATNSDDAPDNNNSATTAAVGGGRSLLRPQMSR 180
           AVSAAPSLRQISRRNSTRL P   PSSEATNS+ +PD NNSA  A+  GGRSLLRPQMSR
Sbjct: 121 AVSAAPSLRQISRRNSTRLNPSVQPSSEATNSNASPD-NNSAAAASGSGGRSLLRPQMSR 180

Query: 181 HNSTRISVERSESFTDLTEPAREGTRRLSAALAEERSMSAREAVAAQEAADAEATANEAE 240
           HNSTR SVERSESFTDLTEP REGTRRLSAALAEERSMSAREAV AQEAADAEAT     
Sbjct: 181 HNSTRFSVERSESFTDLTEPTREGTRRLSAALAEERSMSAREAVTAQEAADAEATV---- 240

Query: 241 QEEEEEEEEEDAESAPAPVRMSLMDLLEETDRQMGFEGSRYRIEDEEEEEEEEEEEESDD 300
            +EEE+++E+ AES PAPVRMSLMDLLEETDRQMGFEGS YRIEDE+EEEE E E     
Sbjct: 241 -DEEEQQQEQVAESTPAPVRMSLMDLLEETDRQMGFEGSTYRIEDEDEEEEIENEVS--- 300

Query: 301 EVTTVCGG---GGTERNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVNR 344
             TTVCGG   GGTE +CCVCMVRHKGAAFIPCGHTFCRLCSRELWV+R
Sbjct: 301 --TTVCGGGGSGGTEPHCCVCMVRHKGAAFIPCGHTFCRLCSRELWVSR 338

[Close]

BLAST of CaUC09G166560 vs. ExPASy TrEMBL
Match: A0A6J1KT79 (nucleolin-like OS=Cucurbita maxima OX=3661 GN=LOC111498015 PE=4 SV=1)

HSP 1 Score: 462.2 bits (1188), Expect = 2.6e-126
Identity = 268/352 (76.14%), Postives = 289/352 (82.10%), Query Frame = 0


Query: 1   MEGGRRRITLYDQMLAVSDGRELAGGFTLNDVLTIQKRASPTPSPAVRLNGRTLLDIIRD 60
           MEGGRRRITLYD+MLAV DGRE+ GG TLNDVLT+ KRASP PSP VRLNGRTLLDI+RD
Sbjct: 1   MEGGRRRITLYDRMLAVGDGREVTGGLTLNDVLTVHKRASPNPSPEVRLNGRTLLDILRD 60

Query: 61  DVGKSP-VGNRERKSWKFLKDRLRLNLRSQIPPPNSFRLPGFSSAEMTPNEEQSTESTTT 120
           DVGKSP  GNRERKSWKFL+DRLRLNLRSQIPPPNS R   FSSAEMT NEEQS ESTT 
Sbjct: 61  DVGKSPAAGNRERKSWKFLRDRLRLNLRSQIPPPNSLRFAVFSSAEMTSNEEQSPESTTP 120

Query: 121 RAVSAAPSLRQISRRNSTRL---VPPSSEATNSDDAPDNNNSATTAAVGG---GRSLLRP 180
              +A P LRQISRRNSTRL   +P S EATNS ++P+NNNS +T A  G    RSLLRP
Sbjct: 121 VVAAAVPVLRQISRRNSTRLSQNIPTSPEATNSGESPENNNSDSTIAGTGSRSSRSLLRP 180

Query: 181 QMSRHNSTRISVERSESFTDLTEPAREGTRRLSAALAEERSMSAREAVAAQEAADAEATA 240
           QMSR NSTR S+ERSESFTDLTEP  EGTRRLSAALA ERSMSARE VA QEAADAE TA
Sbjct: 181 QMSRRNSTRRSLERSESFTDLTEPVHEGTRRLSAALAMERSMSARETVATQEAADAETTA 240

Query: 241 NEAEQEEEEEEEEEDAESAPAPVRMSLMDLLEETDRQMGFEGSRYRIED--EEEEEEEEE 300
           N     E++EE +  A    APVRMSLMDLLEETDRQMGFEGSRY+IED  EEEEEEEEE
Sbjct: 241 N-----EDDEEADSTAVETAAPVRMSLMDLLEETDRQMGFEGSRYKIEDEVEEEEEEEEE 300

Query: 301 EEESDDEVTTVCGGGGTERNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVNR 344
           +EE +DEV  V  GGG+E+ CCVCMVRHKGAAFIPCGHTFCRLCSREL V+R
Sbjct: 301 DEEKEDEVAVV--GGGSEQKCCVCMVRHKGAAFIPCGHTFCRLCSRELLVSR 345

[Close]

BLAST of CaUC09G166560 vs. ExPASy TrEMBL
Match: A0A6J1H6Y3 (chromo domain-containing protein cec-1-like OS=Cucurbita moschata OX=3662 GN=LOC111461059 PE=4 SV=1)

HSP 1 Score: 459.9 bits (1182), Expect = 1.3e-125
Identity = 265/350 (75.71%), Postives = 285/350 (81.43%), Query Frame = 0


Query: 1   MEGGRRRITLYDQMLAVSDGRELAGGFTLNDVLTIQKRASPTPSPAVRLNGRTLLDIIRD 60
           MEGGRRRITLYDQMLAV DGREL GG TLNDVLT+ KRASP PSP VRLNGRTLLDI+RD
Sbjct: 1   MEGGRRRITLYDQMLAVGDGRELTGGLTLNDVLTVHKRASPNPSPEVRLNGRTLLDILRD 60

Query: 61  DVGKSP-VGNRERKSWKFLKDRLRLNLRSQIPPPNSFRLPGFSSAEMTPNEEQSTESTTT 120
           DVGKSP VGNRERKSWKFL+DRLRLNLRSQIPPPNS R   FSSAEMT NEE+S ESTT 
Sbjct: 61  DVGKSPAVGNRERKSWKFLRDRLRLNLRSQIPPPNSLRFAVFSSAEMTSNEEESPESTTP 120

Query: 121 RAVSAAPSLRQISRRNSTRL---VPPSSEATNSDDAPDNNNSATTAAVGG---GRSLLRP 180
              +A P LRQISRR+STRL   +P S EATNS ++P+NNNS +T A  G    RSLLRP
Sbjct: 121 VVAAAVPVLRQISRRSSTRLSQNIPTSPEATNSGESPENNNSDSTIADTGSRSSRSLLRP 180

Query: 181 QMSRHNSTRISVERSESFTDLTEPAREGTRRLSAALAEERSMSAREAVAAQEAADAEATA 240
           QMSR NSTR S+ERSESFTDLTEP  EGTR LSAALA ERSMSARE VA QEAADAE TA
Sbjct: 181 QMSRRNSTRRSLERSESFTDLTEPVHEGTRLLSAALAMERSMSARETVATQEAADAETTA 240

Query: 241 NEAEQEEEEEEEEEDAESAPAPVRMSLMDLLEETDRQMGFEGSRYRIEDEEEEEEEEEEE 300
                +E++EE +  A    APVRMSLMDLLEETDRQMGFEGSRY+IEDE EEEEEEEEE
Sbjct: 241 -----DEDDEEADSTAVETAAPVRMSLMDLLEETDRQMGFEGSRYKIEDEVEEEEEEEEE 300

Query: 301 ESDDEVTTVCGGGGTERNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVNR 344
           E + E      GGG+ER CCVCMVRHKGAAFIPCGHTFCRLCSREL V+R
Sbjct: 301 EEEKEEEVAVVGGGSERKCCVCMVRHKGAAFIPCGHTFCRLCSRELLVSR 345

[Close]

BLAST of CaUC09G166560 vs. TAIR 10
Match: AT1G03330.1 (Small nuclear ribonucleoprotein family protein )

HSP 1 Score: 151.4 bits (381), Expect = 1.9e-36
Identity = 76/90 (84.44%), Postives = 78/90 (86.67%), Query Frame = 0


Query: 394 EVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMTNGVQNFSFQLSVRNCFIR 453
           EVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHM          LSVRNCFIR
Sbjct: 14  EVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHM----------LSVRNCFIR 73

Query: 454 GSVVRYVQLPPDGVDIELLHDATRREARGG 484
           GSVVRYVQLP DGVD++LLHDA RREARGG
Sbjct: 74  GSVVRYVQLPKDGVDVDLLHDAARREARGG 93

[Close]

BLAST of CaUC09G166560 vs. TAIR 10
Match: AT3G07120.1 (RING/U-box superfamily protein )

HSP 1 Score: 150.2 bits (378), Expect = 4.2e-36
Identity = 133/360 (36.94%), Postives = 190/360 (52.78%), Query Frame = 0


Query: 14  MLAVSDGRELAGGFTLNDVL----TIQKRASPTPSPAV-------RLNGRTLLDIIRDDV 73
           M A+        G +L+ VL     I+  + P+P P         R   +TL DIIR++ 
Sbjct: 1   MSALKSRSNSLAGLSLDAVLGGEILIEPPSLPSPPPLPSKSLVPHRPTSQTLFDIIREEY 60

Query: 74  GKSPVGNRERKSWKFLKDRLRLNLRSQIPPPNSFRLPGFSSAEMTPNEEQSTESTTTRAV 133
            K   G+++R +W+  +++LRL  R+     +S  +P  +S  + PN +     T  R+ 
Sbjct: 61  AKE--GHKDRTTWQIFREKLRLK-RTGSAWTSSLHIP--ASDILIPNPKHI--GTAFRSH 120

Query: 134 SAAPSLRQI----------SRRNSTRLVPPSSEATNSDDAPDNNNSATTAAVGGGRSLLR 193
           SA  ++R +                     SS    S   PD++   +    G      +
Sbjct: 121 SAGLNIRDLVHAIPMSDPPGSSGRAMFTRGSSMRVGSSKNPDDSPDISVLEDGPPSRSFK 180

Query: 194 PQMSRHNSTRISVERSESFTDLTEPAREGTRRLSAALAEERSMSAREAVAAQEAADAEAT 253
           PQ+SRH+S R   E  E+            R       EER MSAREAVAAQEAA+AEA 
Sbjct: 181 PQLSRHDSVRDHSEGEEN---------NRRRHPIVTFVEERQMSAREAVAAQEAAEAEAA 240

Query: 254 ANEAEQEEEEEEEEED--------AESAPAPVR-MSLMDLLEETDRQMGFEGSRYRIEDE 313
           A    ++E++++EE+D        + SA  P + MSLMDLLEETDRQMG  GSRY + DE
Sbjct: 241 AAGGSEDEDDDDEEDDSGETEEMKSSSASEPKQTMSLMDLLEETDRQMGLTGSRYAM-DE 300

Query: 314 EEEEEEEEEEESDDEVTTVCGGGGTERNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVNR 344
           +EE EE+EE+E+++E     GGG  E +CCVCMV+ KGA+F PCGHTFC+LCS+EL   +
Sbjct: 301 DEEYEEDEEDENNEEEGDSHGGGEGELSCCVCMVKIKGASFTPCGHTFCKLCSKELMAQK 343

[Close]

BLAST of CaUC09G166560 vs. TAIR 10
Match: AT3G25030.1 (RING/U-box superfamily protein )

HSP 1 Score: 87.0 bits (214), Expect = 4.4e-17
Identity = 93/266 (34.96%), Postives = 116/266 (43.61%), Query Frame = 0


Query: 78  LKDRLRLNLRSQIPPPNSFRLPGFSSAEMTPNEEQSTESTTTRAVSAAPSLRQISRRNST 137
           + D+ R + +   PPP+       S +  +  E    E   +R  +A  SLR+  R    
Sbjct: 35  MADKNRTSPQILSPPPSR------SQSNRSLVEVMQREHRHSRDKTAWKSLREKLRLKRN 94

Query: 138 RLVPPSSEATNSDDAPDNNNSATTAAVGGGRSLLRPQMSRHNSTRISVERSESFTDLTEP 197
             V  SS +  S D P  N    +  +G             NS  ++ E S         
Sbjct: 95  GSVWISSNSIPSLDTPIPNRDNVSHQLG---------FLLSNSGNVTEEAS--------- 154

Query: 198 AREGTRRLSAALAEERSMSAREAVAAQEAADAEATANEAEQEEEEEEEEEDAESAPAPVR 257
           + EG  RL A LAEER++SAR                         EEE  AE    P R
Sbjct: 155 SVEGRIRLGAVLAEERALSAR-------------------------EEETPAEREVEPAR 214

Query: 258 MSLMDLLEETDRQMGFEGSRYRIEDEEEEEEEEEEEESDDEVTTVCGGGGTERNCCVCMV 317
           MSLM+LLEE + QM F      ++ E EEE              V      E +CCVCMV
Sbjct: 215 MSLMELLEENEGQMSF----VSVDGEAEEE--------------VAAVTAAEISCCVCMV 233

Query: 318 RHKGAAFIPCGHTFCRLCSRELWVNR 344
           R KGAAFIPCGHTFCRLCSRELWV R
Sbjct: 275 RSKGAAFIPCGHTFCRLCSRELWVQR 233

[Close]

BLAST of CaUC09G166560 vs. TAIR 10
Match: AT3G25030.2 (RING/U-box superfamily protein )

HSP 1 Score: 87.0 bits (214), Expect = 4.4e-17
Identity = 93/266 (34.96%), Postives = 116/266 (43.61%), Query Frame = 0


Query: 78  LKDRLRLNLRSQIPPPNSFRLPGFSSAEMTPNEEQSTESTTTRAVSAAPSLRQISRRNST 137
           + D+ R + +   PPP+       S +  +  E    E   +R  +A  SLR+  R    
Sbjct: 35  MADKNRTSPQILSPPPSR------SQSNRSLVEVMQREHRHSRDKTAWKSLREKLRLKRN 94

Query: 138 RLVPPSSEATNSDDAPDNNNSATTAAVGGGRSLLRPQMSRHNSTRISVERSESFTDLTEP 197
             V  SS +  S D P  N    +  +G             NS  ++ E S         
Sbjct: 95  GSVWISSNSIPSLDTPIPNRDNVSHQLG---------FLLSNSGNVTEEAS--------- 154

Query: 198 AREGTRRLSAALAEERSMSAREAVAAQEAADAEATANEAEQEEEEEEEEEDAESAPAPVR 257
           + EG  RL A LAEER++SAR                         EEE  AE    P R
Sbjct: 155 SVEGRIRLGAVLAEERALSAR-------------------------EEETPAEREVEPAR 214

Query: 258 MSLMDLLEETDRQMGFEGSRYRIEDEEEEEEEEEEEESDDEVTTVCGGGGTERNCCVCMV 317
           MSLM+LLEE + QM F      ++ E EEE              V      E +CCVCMV
Sbjct: 215 MSLMELLEENEGQMSF----VSVDGEAEEE--------------VAAVTAAEISCCVCMV 233

Query: 318 RHKGAAFIPCGHTFCRLCSRELWVNR 344
           R KGAAFIPCGHTFCRLCSRELWV R
Sbjct: 275 RSKGAAFIPCGHTFCRLCSRELWVQR 233

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BLAST of CaUC09G166560 vs. TAIR 10
Match: AT4G13100.1 (RING/U-box superfamily protein )

HSP 1 Score: 72.0 bits (175), Expect = 1.5e-12
Identity = 61/133 (45.86%), Postives = 73/133 (54.89%), Query Frame = 0


Query: 212 ERSMSARE-AVAAQEAADAEATANEAEQEEEEEEEEEDAESAPAPVRMSLMDLLEETDRQ 271
           E + S+R+ + AA+EAA+ E           E EE +       P RMSLM+LLE+ D  
Sbjct: 124 ETNRSSRDVSDAAEEAAEREGRLRLGTVLAAEREEMQ-------PPRMSLMELLEDND-- 183

Query: 272 MGFEGSRYRIEDEEEEEEEEEEEESDDEVTTVCGGGGTERNCCVCMVRHKGAAFIPCGHT 331
               G  Y +    +E E E  +  D     V   G  E  CCVCMVR KGAAFIPCGHT
Sbjct: 184 ----GHMYEL-SARDEVEVEGRDGCDGGGEAVAVTGAAELGCCVCMVRSKGAAFIPCGHT 242

Query: 332 FCRLCSRELWVNR 344
           FCRLCSRELWV R
Sbjct: 244 FCRLCSRELWVQR 242

The following BLAST results are available for this feature:

BLAST of CaUC09G166560 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0026218.1	1.7e-148	86.53	nucleolin-like [Cucumis melo var. makuwa] >TYK30738.1 nucleolin-like [Cucumis me...	[more]
XP_008458019.1	1.9e-147	85.96	PREDICTED: nucleolin-like [Cucumis melo]	[more]
XP_011659191.1	4.1e-134	79.94	uncharacterized protein LOC101222466 [Cucumis sativus]	[more]
KAG6575985.1	2.0e-128	76.57	hypothetical protein SDJN03_26624, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7014509.1	1.9e-126	75.57	hypothetical protein SDJN02_24687, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of CaUC09G166560 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q1H595	2.7e-35	84.44	Sm-like protein LSM2 OS=Arabidopsis thaliana OX=3702 GN=LSM2 PE=1 SV=1	[more]
Q9Y333	8.1e-24	66.67	U6 snRNA-associated Sm-like protein LSm2 OS=Homo sapiens OX=9606 GN=LSM2 PE=1 SV...	[more]
O35900	8.1e-24	66.67	U6 snRNA-associated Sm-like protein LSm2 OS=Mus musculus OX=10090 GN=Lsm2 PE=1 S...	[more]
Q54TF6	2.9e-21	59.09	Probable U6 snRNA-associated Sm-like protein LSm2 OS=Dictyostelium discoideum OX...	[more]
P38203	1.3e-18	56.82	U6 snRNA-associated Sm-like protein LSm2 OS=Saccharomyces cerevisiae (strain ATC...	[more]

BLAST of CaUC09G166560 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E4J3	8.3e-149	86.53	Nucleolin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold343G00730...	[more]
A0A1S3C6E1	9.2e-148	85.96	nucleolin-like OS=Cucumis melo OX=3656 GN=LOC103497559 PE=4 SV=1	[more]
A0A0A0K6R9	2.0e-134	79.94	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G342770 P...	[more]
A0A6J1KT79	2.6e-126	76.14	nucleolin-like OS=Cucurbita maxima OX=3661 GN=LOC111498015 PE=4 SV=1	[more]
A0A6J1H6Y3	1.3e-125	75.71	chromo domain-containing protein cec-1-like OS=Cucurbita moschata OX=3662 GN=LOC...	[more]

BLAST of CaUC09G166560 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G03330.1	1.9e-36	84.44	Small nuclear ribonucleoprotein family protein	[more]
AT3G07120.1	4.2e-36	36.94	RING/U-box superfamily protein	[more]
AT3G25030.1	4.4e-17	34.96	RING/U-box superfamily protein	[more]
AT3G25030.2	4.4e-17	34.96	RING/U-box superfamily protein	[more]
AT4G13100.1	1.5e-12	45.86	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 219..249
None	No IPR available	COILS	Coil	Coil	coord: 273..300
None	No IPR available	GENE3D	2.30.30.100		coord: 388..482 e-value: 3.4E-24 score: 86.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 280..299
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 268..302
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 88..164
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 173..191
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 232..250
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 88..256
None	No IPR available	PANTHER	PTHR46629	OS01G0917900 PROTEIN	coord: 4..343
None	No IPR available	PANTHER	PTHR46629:SF13	OS01G0917900 PROTEIN	coord: 4..343
None	No IPR available	CDD	cd16449	RING-HC	coord: 312..346 e-value: 1.87569E-8 score: 48.2325
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 311..341
IPR001163	LSM domain, eukaryotic/archaea-type	SMART	SM00651	Sm3	coord: 387..462 e-value: 5.4E-9 score: 45.9
IPR001163	LSM domain, eukaryotic/archaea-type	PFAM	PF01423	LSM	coord: 394..461 e-value: 1.0E-12 score: 47.6
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 277..367 e-value: 4.0E-8 score: 34.6
IPR018957	Zinc finger, C3HC4 RING-type	PFAM	PF00097	zf-C3HC4	coord: 312..342 e-value: 1.9E-4 score: 21.2
IPR016654	U6 snRNA-associated Sm-like protein LSm2	CDD	cd01725	LSm2	coord: 394..480 e-value: 2.25153E-50 score: 164.684
IPR010920	LSM domain superfamily	SUPERFAMILY	50182	Sm-like ribonucleoproteins	coord: 394..481

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC09G166560.1	CaUC09G166560.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006397	mRNA processing
molecular_function	GO:0046872	metal ion binding