CaUC09G165960 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC09G165960
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionPentatricopeptide repeat-containing protein
LocationCiama_Chr09: 8187397 .. 8189052 (+)
RNA-Seq ExpressionCaUC09G165960
SyntenyCaUC09G165960
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAACATGTGCTATACACATATCTTACTATAACCATCAAATCAAACATGGCCACCAAGATTGTGGCTTCCGCTTCTTCCATTCTTTCAATTTCTTCCAAACCTAACCGCTTCTCCTCTCTATTTACTCAGTCCTCTCCAACACTTCCATCATCAAATCATCCTAATGGGAAATGCGCGCCCCAACCCCTTCCATCACCAAAAAACTTCAATTCACCAATTTCCTTTCAACATCGGCTTCCCACCTTCTTACATAATTGAAGAACAGATAACATTACTGCAACTGAAGCATTACATTTCTTTCACCTAATGATGCGTTCAAATCCTACCCCTCCTATATCTTCACACATCATTTACTTGGTGAACTTACTAAGATTAAGCAGTACTCTCAAGTATTTTCTCTCTATAATAAAATGCCTGATTACTTCATGCTCAATGTGAATCGAGTCAGCAAAGGTCTTGCGACCATGGCAGCAATTTTAAGGAGAGGTTATATTCCTAATATAGTGACATATACGACCTTGATTAAGGGCTTGTGTATGGAACATAGGATTAGTGAAGCCACAAGGTTGTTTATGAGAATGCAAAAGTTAGGTTGTATGCCTAATGTGGTTAATTATACCTCTTTGATTCATGGATTTTCCTGGGGTGGGTGGAAACTGGAAGGAGGCTAAACATTCGTTAAATGAGATGGTGGATCAAGGTGTTCGACCAGATATGGTTACATTTAGTGTGTTAATTGATATCCTTTGCTAGGAAGGAAAGGTTATCGAGGCTCAGGAGTTCCTAAAGGCGGTGATTCAGACAGGCAATGTTCTAGATTCATTTACTTATACTTCAGAGGGGTTTTGTTTGGTTGGTGACTTGAATAGTGCGAGGGAACTCTTTGTTAGTATGCTAAGTAAGGGATGTGAACCTGATGTGATTAGTTACAATGTGCTAATCAATGGGTATTGTAAAACTAGGAAGGTGGAAGAAGCAATGAAGATTTACAATGAAATGCTTCTAGAGGGAAAGAGGCCAGGTGTGAAAACATATGGTGCCTTGTTATCGAGGCTTTTTCAGGCAGGCAAGGTTGGTGATGCAAAGAAGCTACTTGGTGTTATGAAAGCTTATGGTATTCCCGCAGATTCATGTATATATCTTATTTCCTTAGATGGGTTGTGTAAGAATGGTTCTTTATTTGAAGCGATGGAACTTTTTAAAGAGCTAAGATCATGCAACTTGAAATTGGACATTAAAATCTTTAATGGTCTAATTGATGGCCTGTGTAAACCAGGAAAACTTGATACTGCTTGGGAGCTTTTCGGAAAACTATCCCAAGAAGGGCATCAACCAAATGTTGTGACTTATACCATTATGATCCATGGGTTTTGTAAAAAGGGACAAGTAGATAAGGCAAATATTTTGTTTCAAAAGATGGAAGAAAATGTCTGTACTCCGGATATAATTACATATAATACCCTTATGCGTTGTTTCTGCGAGAGTAATAAATCAGAGGAGGTGGTTCAACTTCTTCATAAGATGGTTCAAAATGATGTGTCGTCAAATGACAACACTTGCGCCATAGTCGTAGACATGCTTTGCAAAGATGAAAAATATCAAGAATGCCTAGACTTGATTCCAAGCTTTCCTGTCCAAGAGCGTCAACATTGA

mRNA sequence

ATGCAACATATTAAGCAGTACTCTCAAGTATTTTCTCTCTATAATAAAATGCCTGATTACTTCATGCTCAATGTGAATCGAGTCAGCAAAGGTCTTGCGACCATGGCAGCAATTTTAAGGAGAGGTTATATTCCTAATATAGTGACATATACGACCTTGATTAAGGGCTTGTGTATGGAACATAGGATTAGTGAAGCCACAAGGTTGTTTATGAGAATGCAAAAGTTAGGTTGTATGCCTAATGTGGAAGGAAAGGTTATCGAGGCTCAGGAGTTCCTAAAGGCGGTGATTCAGACAGGCAATGTTCTAGATTCATTTACTTATACTTCAGAGGGGTTTTGTTTGGTTGGTGACTTGAATAGTGCGAGGGAACTCTTTGTTAGTATGCTAAGTAAGGGATGTGAACCTGATGTGATTAGTTACAATGTGCTAATCAATGGGTATTGTAAAACTAGGAAGGTGGAAGAAGCAATGAAGATTTACAATGAAATGCTTCTAGAGGGAAAGAGGCCAGGTGTGAAAACATATGGTGCCTTGTTATCGAGGCTTTTTCAGGCAGGCAAGGTTGGTGATGCAAAGAAGCTACTTGGTGTTATGAAAGCTTATGGTATTCCCGCAGATTCATGTATATATCTTATTTCCTTAGATGGGTTGTGTAAGAATGGTTCTTTATTTGAAGCGATGGAACTTTTTAAAGAGCTAAGATCATGCAACTTGAAATTGGACATTAAAATCTTTAATGGTCTAATTGATGGCCTGTGTAAACCAGGAAAACTTGATACTGCTTGGGAGCTTTTCGGAAAACTATCCCAAGAAGGGCATCAACCAAATGTTGTGACTTATACCATTATGATCCATGGGTTTTGTAAAAAGGGACAAGTAGATAAGGCAAATATTTTGTTTCAAAAGATGGAAGAAAATGTCTGTACTCCGGATATAATTACATATAATACCCTTATGCGTTGTTTCTGCGAGAGTAATAAATCAGAGGAGGTGGTTCAACTTCTTCATAAGATGGTTCAAAATGATGTGTCGTCAAATGACAACACTTGCGCCATAGTCGTAGACATGCTTTGCAAAGATGAAAAATATCAAGAATGCCTAGACTTGATTCCAAGCTTTCCTGTCCAAGAGCGTCAACATTGA

Coding sequence (CDS)

ATGCAACATATTAAGCAGTACTCTCAAGTATTTTCTCTCTATAATAAAATGCCTGATTACTTCATGCTCAATGTGAATCGAGTCAGCAAAGGTCTTGCGACCATGGCAGCAATTTTAAGGAGAGGTTATATTCCTAATATAGTGACATATACGACCTTGATTAAGGGCTTGTGTATGGAACATAGGATTAGTGAAGCCACAAGGTTGTTTATGAGAATGCAAAAGTTAGGTTGTATGCCTAATGTGGAAGGAAAGGTTATCGAGGCTCAGGAGTTCCTAAAGGCGGTGATTCAGACAGGCAATGTTCTAGATTCATTTACTTATACTTCAGAGGGGTTTTGTTTGGTTGGTGACTTGAATAGTGCGAGGGAACTCTTTGTTAGTATGCTAAGTAAGGGATGTGAACCTGATGTGATTAGTTACAATGTGCTAATCAATGGGTATTGTAAAACTAGGAAGGTGGAAGAAGCAATGAAGATTTACAATGAAATGCTTCTAGAGGGAAAGAGGCCAGGTGTGAAAACATATGGTGCCTTGTTATCGAGGCTTTTTCAGGCAGGCAAGGTTGGTGATGCAAAGAAGCTACTTGGTGTTATGAAAGCTTATGGTATTCCCGCAGATTCATGTATATATCTTATTTCCTTAGATGGGTTGTGTAAGAATGGTTCTTTATTTGAAGCGATGGAACTTTTTAAAGAGCTAAGATCATGCAACTTGAAATTGGACATTAAAATCTTTAATGGTCTAATTGATGGCCTGTGTAAACCAGGAAAACTTGATACTGCTTGGGAGCTTTTCGGAAAACTATCCCAAGAAGGGCATCAACCAAATGTTGTGACTTATACCATTATGATCCATGGGTTTTGTAAAAAGGGACAAGTAGATAAGGCAAATATTTTGTTTCAAAAGATGGAAGAAAATGTCTGTACTCCGGATATAATTACATATAATACCCTTATGCGTTGTTTCTGCGAGAGTAATAAATCAGAGGAGGTGGTTCAACTTCTTCATAAGATGGTTCAAAATGATGTGTCGTCAAATGACAACACTTGCGCCATAGTCGTAGACATGCTTTGCAAAGATGAAAAATATCAAGAATGCCTAGACTTGATTCCAAGCTTTCCTGTCCAAGAGCGTCAACATTGA

Protein sequence

MQHIKQYSQVFSLYNKMPDYFMLNVNRVSKGLATMAAILRRGYIPNIVTYTTLIKGLCMEHRISEATRLFMRMQKLGCMPNVEGKVIEAQEFLKAVIQTGNVLDSFTYTSEGFCLVGDLNSARELFVSMLSKGCEPDVISYNVLINGYCKTRKVEEAMKIYNEMLLEGKRPGVKTYGALLSRLFQAGKVGDAKKLLGVMKAYGIPADSCIYLISLDGLCKNGSLFEAMELFKELRSCNLKLDIKIFNGLIDGLCKPGKLDTAWELFGKLSQEGHQPNVVTYTIMIHGFCKKGQVDKANILFQKMEENVCTPDIITYNTLMRCFCESNKSEEVVQLLHKMVQNDVSSNDNTCAIVVDMLCKDEKYQECLDLIPSFPVQERQH
Homology
BLAST of CaUC09G165960 vs. NCBI nr
Match: XP_038896203.1 (pentatricopeptide repeat-containing protein At1g63330-like [Benincasa hispida])

HSP 1 Score: 528.1 bits (1359), Expect = 6.3e-146
Identity = 295/518 (56.95%), Postives = 325/518 (62.74%), Query Frame = 0

Query: 1   MQHIKQYSQVFSLYNKM------PDYFML--------NVNRVSKGLATMAAILRRGYIPN 60
           +  IK YSQVFSLYNKM      P++F L        NVNRVS+G A MA ILRRGYIP+
Sbjct: 117 LAQIKHYSQVFSLYNKMCLAGLFPNFFTLNILINCLCNVNRVSEGFAAMAGILRRGYIPD 176

Query: 61  IVTYTTLIKGLCMEHRISEATRLFMRMQKLGCMPNV------------------------ 120
            +TY+TLIKGLCME+RISEATRLFMRMQKLGC P+V                        
Sbjct: 177 KITYSTLIKGLCMEYRISEATRLFMRMQKLGCRPDVVTYGTLIKGLCRTGNINIALKLHQ 236

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 237 EMLNETGQYGINCKPNVICYSSIIDGLCKDRREDEASELFEEMKTRGMIPDVISYTSLIH 296

Query: 181 ---------------------------------------EGKVIEAQEFLKAVIQTGNVL 240
                                                  EGKVIEA++ L  +IQ G V 
Sbjct: 297 GFCWGGKWEEAKRLFNEMVDQGVQPDMVTFNVLIDMLCKEGKVIEAKKLLDVMIQRGIVP 356

Query: 241 DSFTYTS--EGFCLVGDLNSARELFVSMLSKGCEPDVISYNVLINGYCKTRKVEEAMKIY 300
           +  TY S  EGFCLVGDLNS RELFVSM SKGCEPDVISY  LINGYCKT KV EAMK+Y
Sbjct: 357 NLVTYNSLIEGFCLVGDLNSGRELFVSMPSKGCEPDVISYTTLINGYCKTLKVNEAMKLY 416

Query: 301 NEMLLEGKRPGVKTYGALLSRLFQAGKVGDAKKLLGVMKAYGIPADSCIYLISLDGLCKN 360
           NEML  GKRP VKTYGALL+ LFQAGKVGDAKKL GVMKAYG+P DSCIY I LDGLCKN
Sbjct: 417 NEMLQVGKRPNVKTYGALLTGLFQAGKVGDAKKLFGVMKAYGVPIDSCIYGIFLDGLCKN 476

Query: 361 GSLFEAMELFKELRSCNLKLDIKIFNGLIDGLCKPGKLDTAWELFGKLSQEGHQPNVVTY 380
           G LFEAME F EL+S NLKLDI IFN LIDGLCK GKL+TAWELF KLSQEG QPNVVTY
Sbjct: 477 GCLFEAMEFFNELKSYNLKLDIGIFNSLIDGLCKVGKLETAWELFKKLSQEGLQPNVVTY 536

BLAST of CaUC09G165960 vs. NCBI nr
Match: KAA0059713.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK26151.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 505.4 bits (1300), Expect = 4.4e-139
Identity = 286/515 (55.53%), Postives = 321/515 (62.33%), Query Frame = 0

Query: 4   IKQYSQVFSLYNKM------PDYFML--------NVNRVSKGLATMAAILRRGYIPNIVT 63
           I  YSQ+FSLYNKM      P    L        NVNRVS+ LA +A ILRRGYIP+IVT
Sbjct: 53  INHYSQLFSLYNKMCLAGLSPSVVTLNILVNCLCNVNRVSEALAALAGILRRGYIPDIVT 112

Query: 64  YTTLIKGLCMEHRISEATRLFMRMQKLGCMPNV--------------------------- 123
           Y TLIKGLCMEHRISEATRLF+RMQKLGC PNV                           
Sbjct: 113 YNTLIKGLCMEHRISEATRLFLRMQKLGCTPNVVTYGTLIKGLCQTGNVNIALKLHQEML 172

Query: 124 ------------------------------------------------------------ 183
                                                                       
Sbjct: 173 NDTSQYGINCKPNVISYSIIIDGLCKVGREDEAKETFEEMKAQGMVPNVISYSSLIHGFC 232

Query: 184 ------------------------------------EGKVIEAQEFLKAVIQTGNVLDSF 243
                                               EGKVIEA++ L+ +I++G V + F
Sbjct: 233 CAGKWDESKQLFDEMVDQGVQPNKVTFSVLIDTLCKEGKVIEAKKLLELMIESGIVPNVF 292

Query: 244 TYTS--EGFCLVGDLNSARELFVSMLSKGCEPDVISYNVLINGYCKTRKVEEAMKIYNEM 303
           TY S  +GFC+VGDLNSARELFVSM SKGCEPDVISY VLINGYCKT KVEEAMK+YN+M
Sbjct: 293 TYNSLLKGFCMVGDLNSARELFVSMPSKGCEPDVISYTVLINGYCKTLKVEEAMKLYNKM 352

Query: 304 LLEGKRPGVKTYGALLSRLFQAGKVGDAKKLLGVMKAYGIPADSCIYLISLDGLCKNGSL 363
           LL GKRP V TYGALL+ LF AGKVGDAKKL   MKA+GI  +SCIY I LDGLCKNG L
Sbjct: 353 LLVGKRPNVITYGALLTGLFLAGKVGDAKKLFSAMKAHGIAENSCIYSIFLDGLCKNGCL 412

Query: 364 FEAMELFKELRSCNLKLDIKIFNGLIDGLCKPGKLDTAWELFGKLSQEGHQPNVVTYTIM 380
           FEAMELF +L+S N KL+I+ ++ LIDGLCK GKL+TAWELF KLSQEG QPNVVTY IM
Sbjct: 413 FEAMELFTKLKSYNFKLEIETYSCLIDGLCKAGKLETAWELFEKLSQEGLQPNVVTYNIM 472

BLAST of CaUC09G165960 vs. NCBI nr
Match: XP_008451225.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like [Cucumis melo] >XP_016901074.1 PREDICTED: pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like [Cucumis melo])

HSP 1 Score: 498.0 bits (1281), Expect = 7.0e-137
Identity = 286/516 (55.43%), Postives = 317/516 (61.43%), Query Frame = 0

Query: 4   IKQYSQVFSLYNKM------PDYFML--------NVNRVSKGLATMAAILRRGYIPNIVT 63
           IK YS +FSLYNKM      P    L        NVNRVS+ LA MA +LRRGYIPN+VT
Sbjct: 53  IKHYSLLFSLYNKMRLAGLSPSAITLNILVNCLCNVNRVSEALAGMAGLLRRGYIPNVVT 112

Query: 64  YTTLIKGLCMEHRISEATRLFMRMQKLGCMPNV--------------------------- 123
           YTTLIKGLCMEHRISEATRLF+RMQKLGC PNV                           
Sbjct: 113 YTTLIKGLCMEHRISEATRLFLRMQKLGCTPNVVTYGTLVKGLCQTGNVNIALKLHQEML 172

Query: 124 ------------------------------------------------------------ 183
                                                                       
Sbjct: 173 NDTSQYGINCKPNVFNYNIIIDGLCKVGREDEANELFEEMKAQGMIPNVISYSSLIHGFC 232

Query: 184 ------------------------------------EGKVIEAQEFLKAVIQTGNVLDSF 243
                                               EGKVIEA++  + +IQ G V D F
Sbjct: 233 CARKWEESKRLFDEMVDQGVQPDKVTFSVLIDTLCKEGKVIEAKKLFEVMIQRGIVPDLF 292

Query: 244 TYTS--EGFCLVGDLNSARELFVSMLSKGCEPDVISYNVLINGYCKTRKVEEAMKIYNEM 303
            Y+S  EGFC+VGDLNSARELFVSM SKGCEPDVISY VLINGYCKT KVEEAMK+YNEM
Sbjct: 293 IYSSLMEGFCMVGDLNSARELFVSMPSKGCEPDVISYTVLINGYCKTLKVEEAMKLYNEM 352

Query: 304 LLEGKRPGVKTYGALLSRLFQAGKVGDAKKLLGVMKAYGIPADSCIYLISLDGLCKNGSL 363
           LL GKRP V TYGALL+ LF AGKVGDAKKL   MKA GI A+S IY I LDGLCKNG L
Sbjct: 353 LLVGKRPNVITYGALLTGLFLAGKVGDAKKLFSAMKARGISANSHIYGIILDGLCKNGCL 412

Query: 364 FEAMELFKELRSCNLKLDIKIFNGLIDGLCKPGKLDTAWELFGKLSQEGHQPNVVTYTIM 381
           FEAM+LF EL+S N KLDI+ ++ LIDGLCK GKL+TAWELF KLSQEG QPNVVTY+IM
Sbjct: 413 FEAMKLFTELKSYNFKLDIETYSCLIDGLCKEGKLETAWELFEKLSQEGLQPNVVTYSIM 472

BLAST of CaUC09G165960 vs. NCBI nr
Match: KAA0059628.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK08161.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 498.0 bits (1281), Expect = 7.0e-137
Identity = 286/516 (55.43%), Postives = 317/516 (61.43%), Query Frame = 0

Query: 4   IKQYSQVFSLYNKM------PDYFML--------NVNRVSKGLATMAAILRRGYIPNIVT 63
           IK YS +FSLYNKM      P    L        NVNRVS+ LA MA +LRRGYIPN+VT
Sbjct: 53  IKHYSLLFSLYNKMRLAGLSPSAITLNILVNCLCNVNRVSEALAGMAGLLRRGYIPNVVT 112

Query: 64  YTTLIKGLCMEHRISEATRLFMRMQKLGCMPNV--------------------------- 123
           YTTLIKGLCMEHRISEATRLF+RMQKLGC PNV                           
Sbjct: 113 YTTLIKGLCMEHRISEATRLFLRMQKLGCTPNVVTYGTLVKGLCQTGNVNIALKLHQEML 172

Query: 124 ------------------------------------------------------------ 183
                                                                       
Sbjct: 173 NDTSQYGINCKPNVFNYNIIIDGLCKVGREDEANELFEEMKAQGMIPNVISYSSLIHGFC 232

Query: 184 ------------------------------------EGKVIEAQEFLKAVIQTGNVLDSF 243
                                               EGKVIEA++  + +IQ G V D F
Sbjct: 233 CARKWEESKRLFDEMVDQGVQPDKVTFSVLIDTLCKEGKVIEAKKLFEVMIQRGIVPDLF 292

Query: 244 TYTS--EGFCLVGDLNSARELFVSMLSKGCEPDVISYNVLINGYCKTRKVEEAMKIYNEM 303
            Y+S  EGFC+VGDLNSARELFVSM SKGCEPDVISY VLINGYCKT KVEEAMK+YNEM
Sbjct: 293 IYSSLMEGFCMVGDLNSARELFVSMPSKGCEPDVISYTVLINGYCKTLKVEEAMKLYNEM 352

Query: 304 LLEGKRPGVKTYGALLSRLFQAGKVGDAKKLLGVMKAYGIPADSCIYLISLDGLCKNGSL 363
           LL GKRP V TYGALL+ LF AGKVGDAKKL   MKA GI A+S IY I LDGLCKNG L
Sbjct: 353 LLVGKRPNVITYGALLTGLFLAGKVGDAKKLFSAMKARGISANSHIYGIILDGLCKNGCL 412

Query: 364 FEAMELFKELRSCNLKLDIKIFNGLIDGLCKPGKLDTAWELFGKLSQEGHQPNVVTYTIM 381
           FEAM+LF EL+S N KLDI+ ++ LIDGLCK GKL+TAWELF KLSQEG QPNVVTY+IM
Sbjct: 413 FEAMKLFTELKSYNFKLDIETYSCLIDGLCKEGKLETAWELFEKLSQEGLQPNVVTYSIM 472

BLAST of CaUC09G165960 vs. NCBI nr
Match: XP_038897332.1 (pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 497.3 bits (1279), Expect = 1.2e-136
Identity = 275/474 (58.02%), Postives = 302/474 (63.71%), Query Frame = 0

Query: 31  GLATMAAILRRGYIPNIVTYTTLIKGLCMEHRISEATRLFMRMQKLGC------------ 90
           G A MAAILRRGYIP+ +TY+TL+KGLCMEHRISEATRLFMRM KLGC            
Sbjct: 103 GFAAMAAILRRGYIPDKITYSTLVKGLCMEHRISEATRLFMRMHKLGCRHDVVTYGTLIK 162

Query: 91  ------------------------------------------------------------ 150
                                                                       
Sbjct: 163 GLCRTGNINIALKLHQEMLNETGQYGINCKPDVICYSIIIDGLCKYRREDEARELFEEMK 222

Query: 151 ---------------------------------------MPNV------------EGKVI 210
                                                   PNV            EGKVI
Sbjct: 223 TQGMIPDVISYTSLIHGFCWGEKWEEAKRLFNEMVDQGVRPNVVTFNVLIDMLCKEGKVI 282

Query: 211 EAQEFLKAVIQTGNVLDSFTYTS--EGFCLVGDLNSARELFVSMLSKGCEPDVISYNVLI 270
           +A+E L  +IQ G V D  TYTS  EGFC VGDLNSARELF++M SKGCEPDVISY +LI
Sbjct: 283 KAKELLDMMIQRGIVPDLVTYTSLIEGFCKVGDLNSARELFINMPSKGCEPDVISYTMLI 342

Query: 271 NGYCKTRKVEEAMKIYNEMLLEGKRPGVKTYGALLSRLFQAGKVGDAKKLLGVMKAYGIP 330
           NGYCKT KV EAMK+YNEML  GKRP VKTYGALL+ LFQAGKVGDAKKL GVMKAYG+ 
Sbjct: 343 NGYCKTLKVNEAMKLYNEMLQVGKRPNVKTYGALLTGLFQAGKVGDAKKLFGVMKAYGVA 402

Query: 331 ADSCIYLISLDGLCKNGSLFEAMELFKELRSCNLKLDIKIFNGLIDGLCKPGKLDTAWEL 380
            DSCIY I LDGLCKNG LFEAMELF EL+S NLKLDI IFN LIDGLCK G L+TAWEL
Sbjct: 403 IDSCIYGIFLDGLCKNGCLFEAMELFNELKSYNLKLDIGIFNCLIDGLCKVGTLETAWEL 462

BLAST of CaUC09G165960 vs. ExPASy Swiss-Prot
Match: Q6NQ83 (Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g22470 PE=1 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 1.1e-65
Identity = 129/345 (37.39%), Postives = 207/345 (60.00%), Query Frame = 0

Query: 41  RGYIPNIVTYTTLIKGLCMEHRISEATRLFMRMQKLGCMPNV------------EGKVIE 100
           +G   ++VTY++LI GLC + +  +  ++   M     +P+V            EGK++E
Sbjct: 274 KGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLE 333

Query: 101 AQEFLKAVIQTGNVLDSFTYTS--EGFCLVGDLNSARELFVSMLSKGCEPDVISYNVLIN 160
           A+E    +I  G   D+ TY S  +GFC    L+ A ++F  M+SKGCEPD+++Y++LIN
Sbjct: 334 AKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILIN 393

Query: 161 GYCKTRKVEEAMKIYNEMLLEGKRPGVKTYGALLSRLFQAGKVGDAKKLLGVMKAYGIPA 220
            YCK ++V++ M+++ E+  +G  P   TY  L+    Q+GK+  AK+L   M + G+P 
Sbjct: 394 SYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPP 453

Query: 221 DSCIYLISLDGLCKNGSLFEAMELFKELRSCNLKLDIKIFNGLIDGLCKPGKLDTAWELF 280
               Y I LDGLC NG L +A+E+F++++   + L I I+N +I G+C   K+D AW LF
Sbjct: 454 SVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLF 513

Query: 281 GKLSQEGHQPNVVTYTIMIHGFCKKGQVDKANILFQKMEENVCTPDIITYNTLMRCFCES 340
             LS +G +P+VVTY +MI G CKKG + +A++LF+KM+E+ CTPD  TYN L+R     
Sbjct: 514 CSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGG 573

Query: 341 NKSEEVVQLLHKMVQNDVSSNDNTCAIVVDMLCKDEKYQECLDLI 372
           +     V+L+ +M     S++ +T  +V+DML      +  LD++
Sbjct: 574 SGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDRRLDKSFLDML 618

BLAST of CaUC09G165960 vs. ExPASy Swiss-Prot
Match: Q9LQ14 (Pentatricopeptide repeat-containing protein At1g62930, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g62930 PE=2 SV=2)

HSP 1 Score: 240.0 bits (611), Expect = 4.5e-62
Identity = 131/351 (37.32%), Postives = 203/351 (57.83%), Query Frame = 0

Query: 22  MLNVNRVSKGLATMAAILRRGYIPNIVTYTTLIKGLCMEHRISEATRLFMRMQKLGCMPN 81
           + N   V+  L     +  +G  PN+VTY +LI+ LC   R S+A+RL   M +    PN
Sbjct: 265 LCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPN 324

Query: 82  V------------EGKVIEAQEFLKAVIQTGNVLDSFTYTS--EGFCLVGDLNSARELFV 141
           V            EGK++EA++    +I+     D FTY+S   GFC+   L+ A+ +F 
Sbjct: 325 VVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 384

Query: 142 SMLSKGCEPDVISYNVLINGYCKTRKVEEAMKIYNEMLLEGKRPGVKTYGALLSRLFQAG 201
            M+SK C P+V++YN LI G+CK ++VEE M+++ EM   G      TY  L+  LFQAG
Sbjct: 385 LMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAG 444

Query: 202 KVGDAKKLLGVMKAYGIPADSCIYLISLDGLCKNGSLFEAMELFKELRSCNLKLDIKIFN 261
               A+K+   M + G+P D   Y I LDGLCK G L +A+ +F+ L+   ++ DI  +N
Sbjct: 445 DCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYN 504

Query: 262 GLIDGLCKPGKLDTAWELFGKLSQEGHQPNVVTYTIMIHGFCKKGQVDKANILFQKMEEN 321
            +I+G+CK GK++  W+LF  LS +G +PNV+ YT MI GFC+KG  ++A+ LF++M+E+
Sbjct: 505 IMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKED 564

Query: 322 VCTPDIITYNTLMRCFCESNKSEEVVQLLHKMVQNDVSSNDNTCAIVVDML 359
              P+  TYNTL+R            +L+ +M       + +T ++V++ML
Sbjct: 565 GTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML 615

BLAST of CaUC09G165960 vs. ExPASy Swiss-Prot
Match: Q0WKV3 (Pentatricopeptide repeat-containing protein At1g12300, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12300 PE=2 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 1.1e-60
Identity = 126/345 (36.52%), Postives = 196/345 (56.81%), Query Frame = 0

Query: 41  RGYIPNIVTYTTLIKGLCMEHRISEATRLFMRMQKLGCMPNV------------EGKVIE 100
           +G   NI+TY  LI G C   R  +  +L   M K    PNV            EGK+ E
Sbjct: 292 KGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLRE 351

Query: 101 AQEFLKAVIQTGNVLDSFTYTS--EGFCLVGDLNSARELFVSMLSKGCEPDVISYNVLIN 160
           A+E  K +I  G   D+ TYTS  +GFC    L+ A ++   M+SKGC+P++ ++N+LIN
Sbjct: 352 AEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILIN 411

Query: 161 GYCKTRKVEEAMKIYNEMLLEGKRPGVKTYGALLSRLFQAGKVGDAKKLLGVMKAYGIPA 220
           GYCK  ++++ ++++ +M L G      TY  L+    + GK+  AK+L   M +  +P 
Sbjct: 412 GYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPP 471

Query: 221 DSCIYLISLDGLCKNGSLFEAMELFKELRSCNLKLDIKIFNGLIDGLCKPGKLDTAWELF 280
           +   Y I LDGLC NG   +A+E+F+++    ++LDI I+N +I G+C   K+D AW+LF
Sbjct: 472 NIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLF 531

Query: 281 GKLSQEGHQPNVVTYTIMIHGFCKKGQVDKANILFQKMEENVCTPDIITYNTLMRCFCES 340
             L  +G +P V TY IMI G CKKG + +A +LF+KMEE+   PD  TYN L+R     
Sbjct: 532 CSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGD 591

Query: 341 NKSEEVVQLLHKMVQNDVSSNDNTCAIVVDMLCKDEKYQECLDLI 372
             + + V+L+ ++ +   S + +T  +V+DML      +  LD++
Sbjct: 592 GDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDGRLKKSFLDML 636

BLAST of CaUC09G165960 vs. ExPASy Swiss-Prot
Match: Q9CAN0 (Pentatricopeptide repeat-containing protein At1g63130, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g63130 PE=2 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 3.6e-59
Identity = 130/360 (36.11%), Postives = 203/360 (56.39%), Query Frame = 0

Query: 13  LYNKMPDYFMLNVNRVSKGLATMAAILRRGYIPNIVTYTTLIKGLCMEHRISEATRLFMR 72
           +YN + D  + N   V+  L     +  +G  PN+VTY +LI+ LC   R S+A+RL   
Sbjct: 258 IYNTIID-ALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSD 317

Query: 73  MQKLGCMPNV------------EGKVIEAQEFLKAVIQTGNVLDSFTYTS--EGFCLVGD 132
           M +    PNV            EGK++EA++    +I+     D FTY+S   GFC+   
Sbjct: 318 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 377

Query: 133 LNSARELFVSMLSKGCEPDVISYNVLINGYCKTRKVEEAMKIYNEMLLEGKRPGVKTYGA 192
           L+ A+ +F  M+SK C P+V++YN LI G+CK ++V+E M+++ EM   G      TY  
Sbjct: 378 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTT 437

Query: 193 LLSRLFQAGKVGDAKKLLGVMKAYGIPADSCIYLISLDGLCKNGSLFEAMELFKELRSCN 252
           L+   FQA +  +A+ +   M + G+  D   Y I LDGLC NG +  A+ +F+ L+   
Sbjct: 438 LIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSK 497

Query: 253 LKLDIKIFNGLIDGLCKPGKLDTAWELFGKLSQEGHQPNVVTYTIMIHGFCKKGQVDKAN 312
           ++ DI  +N +I+G+CK GK++  W+LF  LS +G +PNVVTYT M+ GFC+KG  ++A+
Sbjct: 498 MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEAD 557

Query: 313 ILFQKMEENVCTPDIITYNTLMRCFCESNKSEEVVQLLHKMVQNDVSSNDNTCAIVVDML 359
            LF++M+E    PD  TYNTL+R            +L+ +M       + +T  +V +ML
Sbjct: 558 ALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVTNML 616

BLAST of CaUC09G165960 vs. ExPASy Swiss-Prot
Match: Q9ASZ8 (Pentatricopeptide repeat-containing protein At1g12620 OS=Arabidopsis thaliana OX=3702 GN=At1g12620 PE=2 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 4.7e-59
Identity = 125/345 (36.23%), Postives = 198/345 (57.39%), Query Frame = 0

Query: 41  RGYIPNIVTYTTLIKGLCMEHRISEATRLFMRMQKLGCMPNV------------EGKVIE 100
           +G+  +I+ YTTLI+G C   R  +  +L   M K    P+V            EGK+ E
Sbjct: 276 KGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLRE 335

Query: 101 AQEFLKAVIQTGNVLDSFTYTS--EGFCLVGDLNSARELFVSMLSKGCEPDVISYNVLIN 160
           A+E  K +IQ G   D+ TYTS  +GFC    L+ A  +   M+SKGC P++ ++N+LIN
Sbjct: 336 AEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILIN 395

Query: 161 GYCKTRKVEEAMKIYNEMLLEGKRPGVKTYGALLSRLFQAGKVGDAKKLLGVMKAYGIPA 220
           GYCK   +++ ++++ +M L G      TY  L+    + GK+  AK+L   M +  +  
Sbjct: 396 GYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRP 455

Query: 221 DSCIYLISLDGLCKNGSLFEAMELFKELRSCNLKLDIKIFNGLIDGLCKPGKLDTAWELF 280
           D   Y I LDGLC NG   +A+E+F+++    ++LDI I+N +I G+C   K+D AW+LF
Sbjct: 456 DIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLF 515

Query: 281 GKLSQEGHQPNVVTYTIMIHGFCKKGQVDKANILFQKMEENVCTPDIITYNTLMRCFCES 340
             L  +G +P+V TY IMI G CKKG + +A++LF+KMEE+  +P+  TYN L+R     
Sbjct: 516 CSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGE 575

Query: 341 NKSEEVVQLLHKMVQNDVSSNDNTCAIVVDMLCKDEKYQECLDLI 372
             + +  +L+ ++ +   S + +T  +VVDML      +  LD++
Sbjct: 576 GDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDGRLKKSFLDML 620

BLAST of CaUC09G165960 vs. ExPASy TrEMBL
Match: A0A5A7UUW8 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold111G00730 PE=4 SV=1)

HSP 1 Score: 505.4 bits (1300), Expect = 2.1e-139
Identity = 286/515 (55.53%), Postives = 321/515 (62.33%), Query Frame = 0

Query: 4   IKQYSQVFSLYNKM------PDYFML--------NVNRVSKGLATMAAILRRGYIPNIVT 63
           I  YSQ+FSLYNKM      P    L        NVNRVS+ LA +A ILRRGYIP+IVT
Sbjct: 53  INHYSQLFSLYNKMCLAGLSPSVVTLNILVNCLCNVNRVSEALAALAGILRRGYIPDIVT 112

Query: 64  YTTLIKGLCMEHRISEATRLFMRMQKLGCMPNV--------------------------- 123
           Y TLIKGLCMEHRISEATRLF+RMQKLGC PNV                           
Sbjct: 113 YNTLIKGLCMEHRISEATRLFLRMQKLGCTPNVVTYGTLIKGLCQTGNVNIALKLHQEML 172

Query: 124 ------------------------------------------------------------ 183
                                                                       
Sbjct: 173 NDTSQYGINCKPNVISYSIIIDGLCKVGREDEAKETFEEMKAQGMVPNVISYSSLIHGFC 232

Query: 184 ------------------------------------EGKVIEAQEFLKAVIQTGNVLDSF 243
                                               EGKVIEA++ L+ +I++G V + F
Sbjct: 233 CAGKWDESKQLFDEMVDQGVQPNKVTFSVLIDTLCKEGKVIEAKKLLELMIESGIVPNVF 292

Query: 244 TYTS--EGFCLVGDLNSARELFVSMLSKGCEPDVISYNVLINGYCKTRKVEEAMKIYNEM 303
           TY S  +GFC+VGDLNSARELFVSM SKGCEPDVISY VLINGYCKT KVEEAMK+YN+M
Sbjct: 293 TYNSLLKGFCMVGDLNSARELFVSMPSKGCEPDVISYTVLINGYCKTLKVEEAMKLYNKM 352

Query: 304 LLEGKRPGVKTYGALLSRLFQAGKVGDAKKLLGVMKAYGIPADSCIYLISLDGLCKNGSL 363
           LL GKRP V TYGALL+ LF AGKVGDAKKL   MKA+GI  +SCIY I LDGLCKNG L
Sbjct: 353 LLVGKRPNVITYGALLTGLFLAGKVGDAKKLFSAMKAHGIAENSCIYSIFLDGLCKNGCL 412

Query: 364 FEAMELFKELRSCNLKLDIKIFNGLIDGLCKPGKLDTAWELFGKLSQEGHQPNVVTYTIM 380
           FEAMELF +L+S N KL+I+ ++ LIDGLCK GKL+TAWELF KLSQEG QPNVVTY IM
Sbjct: 413 FEAMELFTKLKSYNFKLEIETYSCLIDGLCKAGKLETAWELFEKLSQEGLQPNVVTYNIM 472

BLAST of CaUC09G165960 vs. ExPASy TrEMBL
Match: A0A1S4DYL6 (pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103492586 PE=4 SV=1)

HSP 1 Score: 498.0 bits (1281), Expect = 3.4e-137
Identity = 286/516 (55.43%), Postives = 317/516 (61.43%), Query Frame = 0

Query: 4   IKQYSQVFSLYNKM------PDYFML--------NVNRVSKGLATMAAILRRGYIPNIVT 63
           IK YS +FSLYNKM      P    L        NVNRVS+ LA MA +LRRGYIPN+VT
Sbjct: 53  IKHYSLLFSLYNKMRLAGLSPSAITLNILVNCLCNVNRVSEALAGMAGLLRRGYIPNVVT 112

Query: 64  YTTLIKGLCMEHRISEATRLFMRMQKLGCMPNV--------------------------- 123
           YTTLIKGLCMEHRISEATRLF+RMQKLGC PNV                           
Sbjct: 113 YTTLIKGLCMEHRISEATRLFLRMQKLGCTPNVVTYGTLVKGLCQTGNVNIALKLHQEML 172

Query: 124 ------------------------------------------------------------ 183
                                                                       
Sbjct: 173 NDTSQYGINCKPNVFNYNIIIDGLCKVGREDEANELFEEMKAQGMIPNVISYSSLIHGFC 232

Query: 184 ------------------------------------EGKVIEAQEFLKAVIQTGNVLDSF 243
                                               EGKVIEA++  + +IQ G V D F
Sbjct: 233 CARKWEESKRLFDEMVDQGVQPDKVTFSVLIDTLCKEGKVIEAKKLFEVMIQRGIVPDLF 292

Query: 244 TYTS--EGFCLVGDLNSARELFVSMLSKGCEPDVISYNVLINGYCKTRKVEEAMKIYNEM 303
            Y+S  EGFC+VGDLNSARELFVSM SKGCEPDVISY VLINGYCKT KVEEAMK+YNEM
Sbjct: 293 IYSSLMEGFCMVGDLNSARELFVSMPSKGCEPDVISYTVLINGYCKTLKVEEAMKLYNEM 352

Query: 304 LLEGKRPGVKTYGALLSRLFQAGKVGDAKKLLGVMKAYGIPADSCIYLISLDGLCKNGSL 363
           LL GKRP V TYGALL+ LF AGKVGDAKKL   MKA GI A+S IY I LDGLCKNG L
Sbjct: 353 LLVGKRPNVITYGALLTGLFLAGKVGDAKKLFSAMKARGISANSHIYGIILDGLCKNGCL 412

Query: 364 FEAMELFKELRSCNLKLDIKIFNGLIDGLCKPGKLDTAWELFGKLSQEGHQPNVVTYTIM 381
           FEAM+LF EL+S N KLDI+ ++ LIDGLCK GKL+TAWELF KLSQEG QPNVVTY+IM
Sbjct: 413 FEAMKLFTELKSYNFKLDIETYSCLIDGLCKEGKLETAWELFEKLSQEGLQPNVVTYSIM 472

BLAST of CaUC09G165960 vs. ExPASy TrEMBL
Match: A0A5D3C8J0 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold886G00440 PE=4 SV=1)

HSP 1 Score: 498.0 bits (1281), Expect = 3.4e-137
Identity = 286/516 (55.43%), Postives = 317/516 (61.43%), Query Frame = 0

Query: 4   IKQYSQVFSLYNKM------PDYFML--------NVNRVSKGLATMAAILRRGYIPNIVT 63
           IK YS +FSLYNKM      P    L        NVNRVS+ LA MA +LRRGYIPN+VT
Sbjct: 53  IKHYSLLFSLYNKMRLAGLSPSAITLNILVNCLCNVNRVSEALAGMAGLLRRGYIPNVVT 112

Query: 64  YTTLIKGLCMEHRISEATRLFMRMQKLGCMPNV--------------------------- 123
           YTTLIKGLCMEHRISEATRLF+RMQKLGC PNV                           
Sbjct: 113 YTTLIKGLCMEHRISEATRLFLRMQKLGCTPNVVTYGTLVKGLCQTGNVNIALKLHQEML 172

Query: 124 ------------------------------------------------------------ 183
                                                                       
Sbjct: 173 NDTSQYGINCKPNVFNYNIIIDGLCKVGREDEANELFEEMKAQGMIPNVISYSSLIHGFC 232

Query: 184 ------------------------------------EGKVIEAQEFLKAVIQTGNVLDSF 243
                                               EGKVIEA++  + +IQ G V D F
Sbjct: 233 CARKWEESKRLFDEMVDQGVQPDKVTFSVLIDTLCKEGKVIEAKKLFEVMIQRGIVPDLF 292

Query: 244 TYTS--EGFCLVGDLNSARELFVSMLSKGCEPDVISYNVLINGYCKTRKVEEAMKIYNEM 303
            Y+S  EGFC+VGDLNSARELFVSM SKGCEPDVISY VLINGYCKT KVEEAMK+YNEM
Sbjct: 293 IYSSLMEGFCMVGDLNSARELFVSMPSKGCEPDVISYTVLINGYCKTLKVEEAMKLYNEM 352

Query: 304 LLEGKRPGVKTYGALLSRLFQAGKVGDAKKLLGVMKAYGIPADSCIYLISLDGLCKNGSL 363
           LL GKRP V TYGALL+ LF AGKVGDAKKL   MKA GI A+S IY I LDGLCKNG L
Sbjct: 353 LLVGKRPNVITYGALLTGLFLAGKVGDAKKLFSAMKARGISANSHIYGIILDGLCKNGCL 412

Query: 364 FEAMELFKELRSCNLKLDIKIFNGLIDGLCKPGKLDTAWELFGKLSQEGHQPNVVTYTIM 381
           FEAM+LF EL+S N KLDI+ ++ LIDGLCK GKL+TAWELF KLSQEG QPNVVTY+IM
Sbjct: 413 FEAMKLFTELKSYNFKLDIETYSCLIDGLCKEGKLETAWELFEKLSQEGLQPNVVTYSIM 472

BLAST of CaUC09G165960 vs. ExPASy TrEMBL
Match: A0A5A7TFJ3 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G001980 PE=4 SV=1)

HSP 1 Score: 463.4 bits (1191), Expect = 9.2e-127
Identity = 260/482 (53.94%), Postives = 308/482 (63.90%), Query Frame = 0

Query: 4   IKQYSQVFSLYNKM------PDYFML--------NVNRVSKGLATMAAILRRGYIPNIVT 63
           I+ YSQVFSLY +M      PD   L        NVNR+++GLA MA I+RRGYIP+ VT
Sbjct: 104 IEHYSQVFSLYKEMHLAGLSPDLLTLNILINCLCNVNRINEGLAAMAGIMRRGYIPDEVT 163

Query: 64  YTTLIKGLCMEHRISEATRLFMRMQKLGCMPNV--------------------------- 123
           +TTLIKGLC++HRI EAT+LFMRMQKLGC PNV                           
Sbjct: 164 FTTLIKGLCVQHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCAIGNINLALKWHQEML 223

Query: 124 ------------------------------------------------------------ 183
                                                                       
Sbjct: 224 NDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLC 283

Query: 184 -EGKVIEAQEFLKAVIQTGNVLDSFTYTS--EGFCLVGDLNSARELFVSMLSKGCEPDVI 243
            EG+VIEA++ L+ +IQ G V + FTYTS  +GFCL GDLNSA+ELFVSM SKG EPDVI
Sbjct: 284 KEGQVIEAKKLLEMMIQIGIVPNLFTYTSLIKGFCLAGDLNSAKELFVSMPSKGYEPDVI 343

Query: 244 SYNVLINGYCKTRKVEEAMKIYNEMLLEGKRPGVKTYGALLSRLFQAGKVGDAKKLLGVM 303
           SYN+LINGYCKT KVEEAMK+Y+EML  G  P +KT G LL  LF AGKV DAK+L  V+
Sbjct: 344 SYNMLINGYCKTLKVEEAMKLYSEMLHVGMWPDMKTSGVLLKALFLAGKVNDAKELFRVI 403

Query: 304 KAYGIPADSCIYLISLDGLCKNGSLFEAMELFKELRSCNLKLDIKIFNGLIDGLCKPGKL 363
           K Y IP D CI  I LDGLCKNG  FEAM+LF EL+S N+KLDI+ F  LIDGLCK GKL
Sbjct: 404 KPYAIPEDLCICCIFLDGLCKNGCFFEAMKLFNELKSYNMKLDIETFGCLIDGLCKAGKL 463

Query: 364 DTAWELFGKLSQEGHQPNVVTYTIMIHGFCKKGQVDKANILFQKMEENVCTPDIITYNTL 382
           +TAWELF KLS+EG QP+ + YT MIHGFCK+GQVDKANILFQKMEEN C+PD+ITY+ L
Sbjct: 464 ETAWELFDKLSKEGIQPDAMAYTSMIHGFCKEGQVDKANILFQKMEENGCSPDLITYSIL 523

BLAST of CaUC09G165960 vs. ExPASy TrEMBL
Match: A0A1S3BGA8 (pentatricopeptide repeat-containing protein At1g62720-like OS=Cucumis melo OX=3656 GN=LOC103489704 PE=4 SV=1)

HSP 1 Score: 458.4 bits (1178), Expect = 3.0e-125
Identity = 258/482 (53.53%), Postives = 306/482 (63.49%), Query Frame = 0

Query: 4   IKQYSQVFSLYNKM------PDYFML--------NVNRVSKGLATMAAILRRGYIPNIVT 63
           I+ YSQVFSLY +M      PD   L        NVNR+++GLA MA I+RRGYIP+ VT
Sbjct: 104 IEHYSQVFSLYKEMHLAGLSPDLLTLNILINCLCNVNRINEGLAAMAGIMRRGYIPDEVT 163

Query: 64  YTTLIKGLCMEHRISEATRLFMRMQKLGCMPNV--------------------------- 123
           +TTLIKGLC++HRI EAT+LFMRMQKLGC PNV                           
Sbjct: 164 FTTLIKGLCVQHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCAIGNINLALKWHQEML 223

Query: 124 ------------------------------------------------------------ 183
                                                                       
Sbjct: 224 NDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLC 283

Query: 184 -EGKVIEAQEFLKAVIQTGNVLDSFTYTS--EGFCLVGDLNSARELFVSMLSKGCEPDVI 243
            EG+VIEA++ L+ +IQ G V + FTYTS  +GFCL GDLNSA+ELFVSM SKG E DVI
Sbjct: 284 KEGQVIEAKKLLEMMIQIGIVPNLFTYTSLIKGFCLAGDLNSAKELFVSMPSKGYEADVI 343

Query: 244 SYNVLINGYCKTRKVEEAMKIYNEMLLEGKRPGVKTYGALLSRLFQAGKVGDAKKLLGVM 303
           SYN+LINGYCK  KVEEAMK+Y+EML  G  P +KT G LL  LF AGKV DAK+L  V+
Sbjct: 344 SYNMLINGYCKNLKVEEAMKLYSEMLHVGMWPDMKTSGVLLKALFLAGKVNDAKELFRVI 403

Query: 304 KAYGIPADSCIYLISLDGLCKNGSLFEAMELFKELRSCNLKLDIKIFNGLIDGLCKPGKL 363
           K Y IP D CI  I LDGLCKNG  FEAM+LF EL+S N+KLDI+ F  LIDGLCK GKL
Sbjct: 404 KPYAIPEDLCICCIFLDGLCKNGCFFEAMKLFNELKSYNMKLDIETFGCLIDGLCKAGKL 463

Query: 364 DTAWELFGKLSQEGHQPNVVTYTIMIHGFCKKGQVDKANILFQKMEENVCTPDIITYNTL 382
           +TAWELF KLS+EG QP+ + YT MIHGFCK+GQVDKANILFQKMEEN C+PD+ITY+ L
Sbjct: 464 ETAWELFDKLSKEGIQPDAMAYTSMIHGFCKEGQVDKANILFQKMEENGCSPDLITYSIL 523

BLAST of CaUC09G165960 vs. TAIR 10
Match: AT3G22470.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 251.9 bits (642), Expect = 8.1e-67
Identity = 129/345 (37.39%), Postives = 207/345 (60.00%), Query Frame = 0

Query: 41  RGYIPNIVTYTTLIKGLCMEHRISEATRLFMRMQKLGCMPNV------------EGKVIE 100
           +G   ++VTY++LI GLC + +  +  ++   M     +P+V            EGK++E
Sbjct: 274 KGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLE 333

Query: 101 AQEFLKAVIQTGNVLDSFTYTS--EGFCLVGDLNSARELFVSMLSKGCEPDVISYNVLIN 160
           A+E    +I  G   D+ TY S  +GFC    L+ A ++F  M+SKGCEPD+++Y++LIN
Sbjct: 334 AKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILIN 393

Query: 161 GYCKTRKVEEAMKIYNEMLLEGKRPGVKTYGALLSRLFQAGKVGDAKKLLGVMKAYGIPA 220
            YCK ++V++ M+++ E+  +G  P   TY  L+    Q+GK+  AK+L   M + G+P 
Sbjct: 394 SYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPP 453

Query: 221 DSCIYLISLDGLCKNGSLFEAMELFKELRSCNLKLDIKIFNGLIDGLCKPGKLDTAWELF 280
               Y I LDGLC NG L +A+E+F++++   + L I I+N +I G+C   K+D AW LF
Sbjct: 454 SVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLF 513

Query: 281 GKLSQEGHQPNVVTYTIMIHGFCKKGQVDKANILFQKMEENVCTPDIITYNTLMRCFCES 340
             LS +G +P+VVTY +MI G CKKG + +A++LF+KM+E+ CTPD  TYN L+R     
Sbjct: 514 CSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGG 573

Query: 341 NKSEEVVQLLHKMVQNDVSSNDNTCAIVVDMLCKDEKYQECLDLI 372
           +     V+L+ +M     S++ +T  +V+DML      +  LD++
Sbjct: 574 SGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDRRLDKSFLDML 618

BLAST of CaUC09G165960 vs. TAIR 10
Match: AT1G62930.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 240.0 bits (611), Expect = 3.2e-63
Identity = 131/351 (37.32%), Postives = 203/351 (57.83%), Query Frame = 0

Query: 22  MLNVNRVSKGLATMAAILRRGYIPNIVTYTTLIKGLCMEHRISEATRLFMRMQKLGCMPN 81
           + N   V+  L     +  +G  PN+VTY +LI+ LC   R S+A+RL   M +    PN
Sbjct: 265 LCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPN 324

Query: 82  V------------EGKVIEAQEFLKAVIQTGNVLDSFTYTS--EGFCLVGDLNSARELFV 141
           V            EGK++EA++    +I+     D FTY+S   GFC+   L+ A+ +F 
Sbjct: 325 VVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 384

Query: 142 SMLSKGCEPDVISYNVLINGYCKTRKVEEAMKIYNEMLLEGKRPGVKTYGALLSRLFQAG 201
            M+SK C P+V++YN LI G+CK ++VEE M+++ EM   G      TY  L+  LFQAG
Sbjct: 385 LMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAG 444

Query: 202 KVGDAKKLLGVMKAYGIPADSCIYLISLDGLCKNGSLFEAMELFKELRSCNLKLDIKIFN 261
               A+K+   M + G+P D   Y I LDGLCK G L +A+ +F+ L+   ++ DI  +N
Sbjct: 445 DCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYN 504

Query: 262 GLIDGLCKPGKLDTAWELFGKLSQEGHQPNVVTYTIMIHGFCKKGQVDKANILFQKMEEN 321
            +I+G+CK GK++  W+LF  LS +G +PNV+ YT MI GFC+KG  ++A+ LF++M+E+
Sbjct: 505 IMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKED 564

Query: 322 VCTPDIITYNTLMRCFCESNKSEEVVQLLHKMVQNDVSSNDNTCAIVVDML 359
              P+  TYNTL+R            +L+ +M       + +T ++V++ML
Sbjct: 565 GTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML 615

BLAST of CaUC09G165960 vs. TAIR 10
Match: AT1G12300.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 235.3 bits (599), Expect = 7.9e-62
Identity = 126/345 (36.52%), Postives = 196/345 (56.81%), Query Frame = 0

Query: 41  RGYIPNIVTYTTLIKGLCMEHRISEATRLFMRMQKLGCMPNV------------EGKVIE 100
           +G   NI+TY  LI G C   R  +  +L   M K    PNV            EGK+ E
Sbjct: 292 KGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLRE 351

Query: 101 AQEFLKAVIQTGNVLDSFTYTS--EGFCLVGDLNSARELFVSMLSKGCEPDVISYNVLIN 160
           A+E  K +I  G   D+ TYTS  +GFC    L+ A ++   M+SKGC+P++ ++N+LIN
Sbjct: 352 AEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILIN 411

Query: 161 GYCKTRKVEEAMKIYNEMLLEGKRPGVKTYGALLSRLFQAGKVGDAKKLLGVMKAYGIPA 220
           GYCK  ++++ ++++ +M L G      TY  L+    + GK+  AK+L   M +  +P 
Sbjct: 412 GYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPP 471

Query: 221 DSCIYLISLDGLCKNGSLFEAMELFKELRSCNLKLDIKIFNGLIDGLCKPGKLDTAWELF 280
           +   Y I LDGLC NG   +A+E+F+++    ++LDI I+N +I G+C   K+D AW+LF
Sbjct: 472 NIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLF 531

Query: 281 GKLSQEGHQPNVVTYTIMIHGFCKKGQVDKANILFQKMEENVCTPDIITYNTLMRCFCES 340
             L  +G +P V TY IMI G CKKG + +A +LF+KMEE+   PD  TYN L+R     
Sbjct: 532 CSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGD 591

Query: 341 NKSEEVVQLLHKMVQNDVSSNDNTCAIVVDMLCKDEKYQECLDLI 372
             + + V+L+ ++ +   S + +T  +V+DML      +  LD++
Sbjct: 592 GDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDGRLKKSFLDML 636

BLAST of CaUC09G165960 vs. TAIR 10
Match: AT1G63130.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 230.3 bits (586), Expect = 2.5e-60
Identity = 130/360 (36.11%), Postives = 203/360 (56.39%), Query Frame = 0

Query: 13  LYNKMPDYFMLNVNRVSKGLATMAAILRRGYIPNIVTYTTLIKGLCMEHRISEATRLFMR 72
           +YN + D  + N   V+  L     +  +G  PN+VTY +LI+ LC   R S+A+RL   
Sbjct: 258 IYNTIID-ALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSD 317

Query: 73  MQKLGCMPNV------------EGKVIEAQEFLKAVIQTGNVLDSFTYTS--EGFCLVGD 132
           M +    PNV            EGK++EA++    +I+     D FTY+S   GFC+   
Sbjct: 318 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 377

Query: 133 LNSARELFVSMLSKGCEPDVISYNVLINGYCKTRKVEEAMKIYNEMLLEGKRPGVKTYGA 192
           L+ A+ +F  M+SK C P+V++YN LI G+CK ++V+E M+++ EM   G      TY  
Sbjct: 378 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTT 437

Query: 193 LLSRLFQAGKVGDAKKLLGVMKAYGIPADSCIYLISLDGLCKNGSLFEAMELFKELRSCN 252
           L+   FQA +  +A+ +   M + G+  D   Y I LDGLC NG +  A+ +F+ L+   
Sbjct: 438 LIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSK 497

Query: 253 LKLDIKIFNGLIDGLCKPGKLDTAWELFGKLSQEGHQPNVVTYTIMIHGFCKKGQVDKAN 312
           ++ DI  +N +I+G+CK GK++  W+LF  LS +G +PNVVTYT M+ GFC+KG  ++A+
Sbjct: 498 MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEAD 557

Query: 313 ILFQKMEENVCTPDIITYNTLMRCFCESNKSEEVVQLLHKMVQNDVSSNDNTCAIVVDML 359
            LF++M+E    PD  TYNTL+R            +L+ +M       + +T  +V +ML
Sbjct: 558 ALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVTNML 616

BLAST of CaUC09G165960 vs. TAIR 10
Match: AT1G12620.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 229.9 bits (585), Expect = 3.3e-60
Identity = 125/345 (36.23%), Postives = 198/345 (57.39%), Query Frame = 0

Query: 41  RGYIPNIVTYTTLIKGLCMEHRISEATRLFMRMQKLGCMPNV------------EGKVIE 100
           +G+  +I+ YTTLI+G C   R  +  +L   M K    P+V            EGK+ E
Sbjct: 276 KGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLRE 335

Query: 101 AQEFLKAVIQTGNVLDSFTYTS--EGFCLVGDLNSARELFVSMLSKGCEPDVISYNVLIN 160
           A+E  K +IQ G   D+ TYTS  +GFC    L+ A  +   M+SKGC P++ ++N+LIN
Sbjct: 336 AEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILIN 395

Query: 161 GYCKTRKVEEAMKIYNEMLLEGKRPGVKTYGALLSRLFQAGKVGDAKKLLGVMKAYGIPA 220
           GYCK   +++ ++++ +M L G      TY  L+    + GK+  AK+L   M +  +  
Sbjct: 396 GYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRP 455

Query: 221 DSCIYLISLDGLCKNGSLFEAMELFKELRSCNLKLDIKIFNGLIDGLCKPGKLDTAWELF 280
           D   Y I LDGLC NG   +A+E+F+++    ++LDI I+N +I G+C   K+D AW+LF
Sbjct: 456 DIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLF 515

Query: 281 GKLSQEGHQPNVVTYTIMIHGFCKKGQVDKANILFQKMEENVCTPDIITYNTLMRCFCES 340
             L  +G +P+V TY IMI G CKKG + +A++LF+KMEE+  +P+  TYN L+R     
Sbjct: 516 CSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGE 575

Query: 341 NKSEEVVQLLHKMVQNDVSSNDNTCAIVVDMLCKDEKYQECLDLI 372
             + +  +L+ ++ +   S + +T  +VVDML      +  LD++
Sbjct: 576 GDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDGRLKKSFLDML 620

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038896203.16.3e-14656.95pentatricopeptide repeat-containing protein At1g63330-like [Benincasa hispida][more]
KAA0059713.14.4e-13955.53pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK26151... [more]
XP_008451225.17.0e-13755.43PREDICTED: pentatricopeptide repeat-containing protein At3g22470, mitochondrial-... [more]
KAA0059628.17.0e-13755.43pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK08161... [more]
XP_038897332.11.2e-13658.02pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like [Benin... [more]
Match NameE-valueIdentityDescription
Q6NQ831.1e-6537.39Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidop... [more]
Q9LQ144.5e-6237.32Pentatricopeptide repeat-containing protein At1g62930, chloroplastic OS=Arabidop... [more]
Q0WKV31.1e-6036.52Pentatricopeptide repeat-containing protein At1g12300, mitochondrial OS=Arabidop... [more]
Q9CAN03.6e-5936.11Pentatricopeptide repeat-containing protein At1g63130, mitochondrial OS=Arabidop... [more]
Q9ASZ84.7e-5936.23Pentatricopeptide repeat-containing protein At1g12620 OS=Arabidopsis thaliana OX... [more]
Match NameE-valueIdentityDescription
A0A5A7UUW82.1e-13955.53Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S4DYL63.4e-13755.43pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like OS=Cuc... [more]
A0A5D3C8J03.4e-13755.43Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A5A7TFJ39.2e-12753.94Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3BGA83.0e-12553.53pentatricopeptide repeat-containing protein At1g62720-like OS=Cucumis melo OX=36... [more]
Match NameE-valueIdentityDescription
AT3G22470.18.1e-6737.39Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G62930.13.2e-6337.32Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G12300.17.9e-6236.52Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G63130.12.5e-6036.11Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G12620.13.3e-6036.23Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 87..166
e-value: 3.1E-17
score: 64.7
coord: 1..83
e-value: 9.7E-12
score: 46.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 167..258
e-value: 7.5E-19
score: 69.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 259..380
e-value: 6.6E-34
score: 119.7
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 136..181
e-value: 5.8E-14
score: 52.0
coord: 276..324
e-value: 1.2E-17
score: 63.8
coord: 45..82
e-value: 1.5E-11
score: 44.3
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 112..134
e-value: 0.1
score: 12.9
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 238..268
e-value: 8.0E-7
score: 28.7
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 112..138
e-value: 4.9E-5
score: 21.2
coord: 175..207
e-value: 2.6E-4
score: 18.9
coord: 48..82
e-value: 9.7E-9
score: 32.9
coord: 215..242
e-value: 8.0E-5
score: 20.6
coord: 245..278
e-value: 3.1E-6
score: 25.0
coord: 314..347
e-value: 4.9E-8
score: 30.7
coord: 139..171
e-value: 4.0E-10
score: 37.2
coord: 279..313
e-value: 3.9E-9
score: 34.1
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 207..241
score: 9.536388
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 102..136
score: 8.560833
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 137..171
score: 13.888024
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 312..346
score: 11.476539
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 242..276
score: 11.805378
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 46..80
score: 12.627475
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 277..311
score: 12.857662
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 172..206
score: 8.988323
NoneNo IPR availablePANTHERPTHR47941PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 3, MITOCHONDRIALcoord: 84..371
coord: 26..242
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 82..306

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC09G165960.1CaUC09G165960.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding