CaUC09G165110 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC09G165110
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Single-stranded DNA-binding protein
Location	Ciama_Chr09: 7039440 .. 7044946 (-)
RNA-Seq Expression	CaUC09G165110
Synteny	CaUC09G165110

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCTCGCGGCCTCGCCCAACAGTTTGGCGCGCACAGAAACACTGTCCAAGATAAGAGCGAAATCGAGAGCGATGATAATGGCCCTTGAGCAAACCCTAACTCTTTCTTCATCATTGTTGTCAAAGAACTCCATCTTCTCCACCTTTAGAAACGACTTACGAATTACTTCTTTCTCCACTTTTCTCTCGCATCCAAATGCTCCTAAACACCTCCGTTTCGCAACTCGTTTCCCAAAATGCTCGGCTATGGAAAACTACATCAATTACTCTGTAGCCTACCCAAAACCTTCCGAAATTCCATGGAAGAAGGAGCTCAGTAACTCGGTCAGTCTCATCGGCACCGTTGGTATGCCTGTGGAGCTCAAGCACCTAACGTCGGGCAAGGATGTGGCTTGGACGCGACTTGCTGTCTGGAAATCCTCTACTGAAACATCTTGGTACTCATCTATTGTTTCATTTCGAAATGGGCTTTAGTATGGTTGCTTTTCGATAGAAGATTGGATGATAATGTGTTTTTTTTTTTTTAGAAGAATCAGTTCTTGAGTAGTTGGAATCGAGATGTTAAGAATATGGAAATCTTAGGTCTCTTATTAAAAATAAAAAAATAATAATGAATATGGAAATTTTAGGACGATGGTTTAGACTATATTTCTGTTTACGTCCAGTGCCATCCCTAAATTGGTGTCCCAAGTTGAAACCAATTGAATCTTTAAACAACGGCTTTCCTTGTTTCACCAAGTTTGGAAGGAAGTTGCTCAAATGCCTCTGTTTTGTGTGGAGTTTGACACATTTTAAAATTCTTACCAATGGAAGTTTGTTGTTGTTATCATTATTTTGTCATTTTTGTCCCCTTTTCGGGTCTTTCTTGTTTGTATAGCTTTTGCTCTGTACTCTCCATCTTACAAAAGCTGAGATTCCACCTTCTCTGTCATTCTTAGAATCGTTGACTTGTGTCAATTGGAGTTAGCTAGGGGTTGAAGTTTAGGAAACCGTGAATGGGCAGGAATTATGGATGATGGAACCAAGGATCTTCTAAAAAACTAACCAAAGCATCCTGACCAACTTTACATGTCAGAGGTGATCCACTTTCTGGTCAAGAAATGTAACGGTGAGCATATTTTCACTATGGCACATCATCTGTCTTATAGCTTCCTTAAATATTTGTTCATTGGCGAAGCTCCTCAGTGAGGCTGAGGGCACCTCCCTCCAAGAGAGCTATGTGCCTGAGCTCGTGCGTAAATACAATTTTTAAAATTATGACCTTGCACTTTAGGCCCAAAGGGCTATTATGCTTCAATTCACTTTCAGGAAGATACACAAGTCCTTTTGGTGGTCAAACTTAATGCTTCAAATCTGCATCATCATGTAAGTTATACTATTAGGACAAATGTTAATACATTATTAAAAAATTAGTCATTAGCTAGGGAGATTAATAGAGAAGTAGTTATAACTAAAGTGAACCAGAGGGGTCAATGGGTGTATAATTGTGTATGATCTTAGGAGAGAATTAAGCCTTGTTAATGCTTGGCAACCCATTGTAGTTTTCCTCCATTCATTAGCCATATCAATATCATGTTTTCATTCATTTCCATTTCCAATTTTGTTTCCTATCAAATTGGTGTTGGAACACCAACCACTAGGGACTGTGTCCAACTATTTTCTAGTTAGCTCCTACTTTCCTTACTAATGGCCAGTGCTGCTGATTTTTTAGGGAGCATAATAATAGTATCACCCAAAGAGTCCCCCACCTTTGATGACTTCCTTTCCACTCCACCCACATCGTTTCAAAACACTTTTGGCTAACTAGCAGGCAAGAAAAATGTTTGGTTTCCTGAAGAATAATCACCTCAGGCCTCTTCTGCAGTACAACATCCTTGATGAGCCTCCACTTCAACCTCTGAAATTTTAAAAGGAACCTTCATTAAGACCCTAGGGGACTCAATGAAGCGCCACCCATTGTAGCCAACAAATTCTCAAGTTAGACCACTTAAAAGACAAATCTAACTGATCCGCTCGTCTGGACATACCAGAAAGAAGCCTGGTAGTACCCAGTATTGCTAGTGGGCTAAGTCTTTCGAGTGCACCCTTTGTCACTTTACTTTGTTGATTAGCATTCCCAATAGCATTTTTTGTTAGCTTCCCTTTCAATTTTTGGTTCCCATCACATTTTTGTTTTGTTTTCATTGATGATGAGAAACATGTTAAATTGAGATAGAGAAGGAAAACAGAAGGGGGGAAGGGCATAACGTTGTTTAAAGACTCCTGATTTCTTGCAAGCCAAAAATCCCAGAAAGTGCTCTTCATTCACTCCTTTGCACGGAACTCTGGTTTCTAGAGAGATACAGCATGGCATTTCAATCATGGTGGGTTCAAATATAATGACAATTAATGACTATGATCCAGATCAGGATTTTCCTCTTTCAGGATAAATTTAACATTCTGGGATGAATTGGCACATGTTGCTTCTCAACACGTCCAGAAAGGCAACCAAATATATGTATCTGGTCGGCTGGTAGCAGATTTAGTTGAAGCTGATGATGGGAAACAGCAAACATACTATAAGGTTTTGCCATAGTTGTTCACATCGTTCCATGGTTTTTCTGTTCGTTCATGAAGTAAATACTGATGCTTTCAAATCTTTTGCAGGTAGTAGTTCAGCAACTGAATTTTATAGAAAGAAGCAACTCAACAGCACCTCATTATGACCAAGACTCTAGTTCCATGATGGCAGGCATGGGATATTTTTTTAATTTAAGATTATTAGATGACACTTTATTTTGCTTCAGAATCTTATTATTTGGTGTCCAATCACATTTCTTCCCAGGGAGAAAGCTTGGCAGCGGTGCTGTTGATAATATGGGGTCCACACAAGAACTATGGCAAGCATTCTTTGCAAATCCCGTTGACTGGTGGGACAATAGGAAGAATAAGGTACTTGATTAATTATCTTGCAATTTTAAGATTCAAATATCTTGTTTTTGGATTCAAATATTCTTAACATGAACCAAATCTAGTATTTTGCTTGTGTTTTTATGTGTGTGAATTGTGTTACTTATATTGTTTTTTTTTTTTCCAAATTGATGCATGAACAAACCTTAGGAACTTACAACGAACTCTGCATGACAGAATAGCATACATTTTATGTATGTTATTATTTGGAAAAATTGCAAAAACCACCCTTGAACTATGGAGTTGGTTACAACCGCAACCACAACCACACCCATGAACATTCAATTTGATCAATTATCCTCCTGAAGTTTCATAATGGTTGCAACCGCCATCTGCTAGCATTGTGGTTTGGAGCAACCCCTTTTGTTATAATTTATATTAACTCACATATGCCTGGGGGCAGGCCTCATGAATGGTTACATTTTCTTAACTAATCTTCCAGGGATACAAATTCCCAAGGGAAGTGAGAATAAAGAAAGAAAAAAAAACAATATCAAGAACTTTAAGGCAAATACAAGCGAATATTAGAGGTCAGCCGATGGAACATTGTGTTAAAGAACAATAGGTTTATCCAATAAATTACATCTTCTTTGAACCAAAAACTTTTAGAGCTTGCAAATCATGGTCAAAGTGAAGAAGGAAGACTCTACAAACCACTCCAAAAGCAGCAGCAGTAACCAAAAACGAGGCTAAAAAAAGGCAATCAACAAGAACACAGCCAAAAAGAAATTCATCCAGTGCTTGCTGAAAAAACCTTTGATGGATATTTATGAGCTTTACAGCAACAAAACTTCAAATTCCAGAAACTTAGAGCAACCACACAAGTTTCTATAGCTCTTTGCAAACAACATGAGGAGAGTAGGCTTTCTTAACAGCAAAGGATCCGAAAGTAACAACAGGCACAAGACTAACCGATGGGAGCTCTAAAACAACCTCAAAGGGAGCAACTGAGGCTGTAAAGATTTGCAAAAGGCCCAAAGCAAAAGCAATCAAACTGAAACAGAGCAGACTAAGAACAACTTATCAAACGCTGAAAAAGGTAGAAGCAGCAAACATAGAAGGAAGGAATCAGCACTAGGCAAGTAGGCATAGAAAAAGAAAGCCTGCATGAGACCAAACCAAACTCAAATGTACAGCCACGAAGACTAGATGAAATCTCTAGGAGCCCGTATGCTTGAAAACTTGAACTCATAAACCTCAAGACCACCATCTTTAGGAAGGAGGAAAATTATATTTATCTTGTGTGTTCTCATGAATGAAGGAGAGGAGGGACGTCATATCAGACAAATAATTTGGAGGGCTAATGTCTTCTTGAAAAAAGTTACATAGAACGCTATCAATAGCTTGTTCAGATGATATTTTATCATTTCGATTGTCAATTGGAAAATTGAAATCCAATTCCTCACTCACAAGTCTCGCCATGAATTCGTAGTATTATTCGAGCTAATCATCCGAACATTCTAACTTTTTGGTTGACTCATTTGTTGAAAAAATCACACCCTTTGGACACACCTTTATCAACTAGGAGGCTGAAATTGCAAAAGACGGGAACTGGGGAGAGTTGAGTTCGAGCCCACCGAGATTCAGGAATTCTCTTTCAAATAGCTAAAAGCCTAAAAGAGTACTTGAGCTTTTAAATTTTTAAAGTATAGAAGCTAAACCAAGTAAGAGCAACACAGGAAAGTTGCCAACCGGCTTTTTTAGTTATCATATCTAAATATCATTATTTATTGTATGTATGAAATGTCTGGCCTCAATGATTTAAAAGGAAACAAGGAATTAGTAGCCTCTTGCAGGCCATTTTAGACATTCCAAAAGTTACCTTTTGTTAGTATTTGTATGTTTCCTTCACTGTATGATTCAGTTGAATCCATGATGAGAGCTGAGTTTCACTCTTTAATGTTAATACATTGGCATTTTGATTCTGCTTGCAGAAGAACCCAAAATATCCAGATTTTAAACACAAAGACACTGGGGAAGCCTTGTGGGTTGAGGGCAGGTATAATCCACCCTGGGTGAAGTCCCAGCTGGCATTATTGGACATGAGAATGAGTTCTCTTGATGATCAGGAAGCCAAAATGGCCAACTTTGTTACTAATTTTGATTTCCCATCTTATTAAACTGACTCTGGATTCCTTTAAATTGTTTCCAACAGAGGTTTCACCAAATATATTTTGAAAAATTCTTTTGTGCTGTCTGGCTTGTATAATTTGTAAATTAGTTTACTGTATATTAGATTGTTAGTAATTTAAATATTTCTTCAGGCTCCAAGTTCAATGCCTGTTATGAAGGGAAAAAGAAAAAGAAAGGCATGGAATGTTTGATATTTTGTTTAGGGACGTTTAGTTGACAGTGATTCAAAATATGGTCAATTCGTTTTTGCCTTTCACTTGATAATAGAGAAGTATAGGGACCTTAAACTTTGTTTTAAAAATACCTTATTCTGTCAAAAGTTGTAATATCATCATTGTCTTTCCACAAATGTTTCAATACTATTATACGAATAGAAATCTTTTAGAATTTTAGATGAAAGTTAGGACATGAGATTTTGATCATCAC

mRNA sequence

CCCTCGCGGCCTCGCCCAACAGTTTGGCGCGCACAGAAACACTGTCCAAGATAAGAGCGAAATCGAGAGCGATGATAATGGCCCTTGAGCAAACCCTAACTCTTTCTTCATCATTGTTGTCAAAGAACTCCATCTTCTCCACCTTTAGAAACGACTTACGAATTACTTCTTTCTCCACTTTTCTCTCGCATCCAAATGCTCCTAAACACCTCCGTTTCGCAACTCGTTTCCCAAAATGCTCGGCTATGGAAAACTACATCAATTACTCTGTAGCCTACCCAAAACCTTCCGAAATTCCATGGAAGAAGGAGCTCAGTAACTCGGTCAGTCTCATCGGCACCGTTGGTATGCCTGTGGAGCTCAAGCACCTAACGTCGGGCAAGGATGTGGCTTGGACGCGACTTGCTGTCTGGAAATCCTCTACTGAAACATCTTGGATAAATTTAACATTCTGGGATGAATTGGCACATGTTGCTTCTCAACACGTCCAGAAAGGCAACCAAATATATGTATCTGGTCGGCTGGTAGCAGATTTAGTTGAAGCTGATGATGGGAAACAGCAAACATACTATAAGGTAGTAGTTCAGCAACTGAATTTTATAGAAAGAAGCAACTCAACAGCACCTCATTATGACCAAGACTCTAGTTCCATGATGGCAGGCATGGGATATTTTTTTAATTTAAGATTATTAGATGACACTTTATTTTGCTTCAGAATCTTATTATTTGGTGTCCAATCACATTTCTTCCCAGGGAGAAAGCTTGGCAGCGGTGCTGTTGATAATATGGGGTCCACACAAGAACTATGGCAAGCATTCTTTGCAAATCCCGTTGACTGGTGGGACAATAGGAAGAATAAGAAGAACCCAAAATATCCAGATTTTAAACACAAAGACACTGGGGAAGCCTTGTGGGTTGAGGGCAGGTATAATCCACCCTGGGTGAAGTCCCAGCTGGCATTATTGGACATGAGAATGAGTTCTCTTGATGATCAGGAAGCCAAAATGGCCAACTTTGTTACTAATTTTGATTTCCCATCTTATTAAACTGACTCTGGATTCCTTTAAATTGTTTCCAACAGAGGTTTCACCAAATATATTTTGAAAAATTCTTTTGTGCTGTCTGGCTTGTATAATTTGTAAATTAGTTTACTGTATATTAGATTGTTAGTAATTTAAATATTTCTTCAGGCTCCAAGTTCAATGCCTGTTATGAAGGGAAAAAGAAAAAGAAAGGCATGGAATGTTTGATATTTTGTTTAGGGACGTTTAGTTGACAGTGATTCAAAATATGGTCAATTCGTTTTTGCCTTTCACTTGATAATAGAGAAGTATAGGGACCTTAAACTTTGTTTTAAAAATACCTTATTCTGTCAAAAGTTGTAATATCATCATTGTCTTTCCACAAATGTTTCAATACTATTATACGAATAGAAATCTTTTAGAATTTTAGATGAAAGTTAGGACATGAGATTTTGATCATCAC

Coding sequence (CDS)

ATGATAATGGCCCTTGAGCAAACCCTAACTCTTTCTTCATCATTGTTGTCAAAGAACTCCATCTTCTCCACCTTTAGAAACGACTTACGAATTACTTCTTTCTCCACTTTTCTCTCGCATCCAAATGCTCCTAAACACCTCCGTTTCGCAACTCGTTTCCCAAAATGCTCGGCTATGGAAAACTACATCAATTACTCTGTAGCCTACCCAAAACCTTCCGAAATTCCATGGAAGAAGGAGCTCAGTAACTCGGTCAGTCTCATCGGCACCGTTGGTATGCCTGTGGAGCTCAAGCACCTAACGTCGGGCAAGGATGTGGCTTGGACGCGACTTGCTGTCTGGAAATCCTCTACTGAAACATCTTGGATAAATTTAACATTCTGGGATGAATTGGCACATGTTGCTTCTCAACACGTCCAGAAAGGCAACCAAATATATGTATCTGGTCGGCTGGTAGCAGATTTAGTTGAAGCTGATGATGGGAAACAGCAAACATACTATAAGGTAGTAGTTCAGCAACTGAATTTTATAGAAAGAAGCAACTCAACAGCACCTCATTATGACCAAGACTCTAGTTCCATGATGGCAGGCATGGGATATTTTTTTAATTTAAGATTATTAGATGACACTTTATTTTGCTTCAGAATCTTATTATTTGGTGTCCAATCACATTTCTTCCCAGGGAGAAAGCTTGGCAGCGGTGCTGTTGATAATATGGGGTCCACACAAGAACTATGGCAAGCATTCTTTGCAAATCCCGTTGACTGGTGGGACAATAGGAAGAATAAGAAGAACCCAAAATATCCAGATTTTAAACACAAAGACACTGGGGAAGCCTTGTGGGTTGAGGGCAGGTATAATCCACCCTGGGTGAAGTCCCAGCTGGCATTATTGGACATGAGAATGAGTTCTCTTGATGATCAGGAAGCCAAAATGGCCAACTTTGTTACTAATTTTGATTTCCCATCTTATTAA

Protein sequence

MIMALEQTLTLSSSLLSKNSIFSTFRNDLRITSFSTFLSHPNAPKHLRFATRFPKCSAMENYINYSVAYPKPSEIPWKKELSNSVSLIGTVGMPVELKHLTSGKDVAWTRLAVWKSSTETSWINLTFWDELAHVASQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIERSNSTAPHYDQDSSSMMAGMGYFFNLRLLDDTLFCFRILLFGVQSHFFPGRKLGSGAVDNMGSTQELWQAFFANPVDWWDNRKNKKNPKYPDFKHKDTGEALWVEGRYNPPWVKSQLALLDMRMSSLDDQEAKMANFVTNFDFPSY

Homology

[Close]

BLAST of CaUC09G165110 vs. NCBI nr
Match: XP_038896738.1 (protein OSB2, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 542.7 bits (1397), Expect = 2.1e-150
Identity = 272/324 (83.95%), Postives = 282/324 (87.04%), Query Frame = 0


Query: 1   MIMALEQTLTLSSSLLSKNSIFSTFRNDLRITSFSTFLSHPNAPKHLRFATRFPKCSAME 60
           MIMALEQTLTLSSSLLSKNSIFS  RN+LRI+SF  FLS  NAPKHLRFATRFPKCSAME
Sbjct: 1   MIMALEQTLTLSSSLLSKNSIFSIPRNELRISSFYPFLSGLNAPKHLRFATRFPKCSAME 60

Query: 61  NYINYSVAYPKPSEIPWKKELSNSVSLIGTVGMPVELKHLTSGKDVAWTRLAVWKSSTET 120
           NY +YS  YPKPSEIPWKK+LSNSVSLIGTVGMPVELKHL +GKDVAWTRLAVWKSSTET
Sbjct: 61  NYSSYSPTYPKPSEIPWKKDLSNSVSLIGTVGMPVELKHLATGKDVAWTRLAVWKSSTET 120

Query: 121 SWINLTFWDELAHVASQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIERS 180
           SWINLTFWDELAHVASQH+QKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIERS
Sbjct: 121 SWINLTFWDELAHVASQHIQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIERS 180

Query: 181 NSTAPHYDQDSSSMMAGMGYFFNLRLLDDTLFCFRILLFGVQSHFFPGRKLGSGAVDNMG 240
           NST PHYDQDS+S+MA                               G+KLGSGAVDN+G
Sbjct: 181 NSTGPHYDQDSNSVMA-------------------------------GKKLGSGAVDNVG 240

Query: 241 STQELWQAFFANPVDWWDNRKNKKNPKYPDFKHKDTGEALWVEGRYNPPWVKSQLALLDM 300
           STQELWQAFFANPVDWWDNRKNKKNPKYPDFKHKDTGEALWVEGRYNPPWVKSQLALLDM
Sbjct: 241 STQELWQAFFANPVDWWDNRKNKKNPKYPDFKHKDTGEALWVEGRYNPPWVKSQLALLDM 293

Query: 301 RMSSLDDQEAKMANFVTNFDFPSY 325
           RMSSLDDQEAKMANFVTNFDFPSY
Sbjct: 301 RMSSLDDQEAKMANFVTNFDFPSY 293

[Close]

BLAST of CaUC09G165110 vs. NCBI nr
Match: XP_008451268.1 (PREDICTED: protein OSB2, chloroplastic-like [Cucumis melo])

HSP 1 Score: 519.6 bits (1337), Expect = 1.9e-143
Identity = 263/325 (80.92%), Postives = 273/325 (84.00%), Query Frame = 0


Query: 1   MIMALEQTLTLSSSLLSKNSIFSTFRNDLRITSFSTFLSHPNAPKHLRFATRFPKCSAME 60
           M +ALEQTLTLSSS  SKNSIFS  RN LRI+SF  F S+ N PKHLRFATRFPKCSAME
Sbjct: 3   MALALEQTLTLSSSFSSKNSIFSIPRNQLRISSFFPFHSYLNPPKHLRFATRFPKCSAME 62

Query: 61  NYINYS-VAYPKPSEIPWKKELSNSVSLIGTVGMPVELKHLTSGKDVAWTRLAVWKSSTE 120
           NY NYS V YPKPSEIPWKKELSNSV+LIGTVG+PVELKHL SGKDVAWTRLAVWKSSTE
Sbjct: 63  NYTNYSAVTYPKPSEIPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSSTE 122

Query: 121 TSWINLTFWDELAHVASQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIER 180
           TSWI+LTFWDELAH+ASQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIER
Sbjct: 123 TSWISLTFWDELAHIASQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIER 182

Query: 181 SNSTAPHYDQDSSSMMAGMGYFFNLRLLDDTLFCFRILLFGVQSHFFPGRKLGSGAVDNM 240
           SNSTAPHYDQDS+S+MA                               GRK  SGAVDN 
Sbjct: 183 SNSTAPHYDQDSNSIMA-------------------------------GRKPSSGAVDNT 242

Query: 241 GSTQELWQAFFANPVDWWDNRKNKKNPKYPDFKHKDTGEALWVEGRYNPPWVKSQLALLD 300
            STQELWQAFFANPVDWWDNRKNKKNPKYPDFKHKDTGEALWVEGRYNPPWVKSQLALLD
Sbjct: 243 ASTQELWQAFFANPVDWWDNRKNKKNPKYPDFKHKDTGEALWVEGRYNPPWVKSQLALLD 296

Query: 301 MRMSSLDDQEAKMANFVTNFDFPSY 325
           MRMSSLDDQE KM NFV+NFDFPSY
Sbjct: 303 MRMSSLDDQEVKMTNFVSNFDFPSY 296

[Close]

BLAST of CaUC09G165110 vs. NCBI nr
Match: KAA0059696.1 (protein OSB2 [Cucumis melo var. makuwa] >TYK26133.1 protein OSB2 [Cucumis melo var. makuwa])

HSP 1 Score: 517.7 bits (1332), Expect = 7.3e-143
Identity = 262/325 (80.62%), Postives = 273/325 (84.00%), Query Frame = 0


Query: 1   MIMALEQTLTLSSSLLSKNSIFSTFRNDLRITSFSTFLSHPNAPKHLRFATRFPKCSAME 60
           M +ALEQTLTLSSS  SKNSIFS  RN LRI+SF  F S+ N PKHLRFATRFPKCSAME
Sbjct: 3   MALALEQTLTLSSSFSSKNSIFSIPRNQLRISSFFPFHSYLNPPKHLRFATRFPKCSAME 62

Query: 61  NYINYS-VAYPKPSEIPWKKELSNSVSLIGTVGMPVELKHLTSGKDVAWTRLAVWKSSTE 120
           NY NYS V YPKPSEIPWKKELSNSV+LIGTVG+PVELKHL SGKDVAWTRLAVWKSSTE
Sbjct: 63  NYTNYSAVTYPKPSEIPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSSTE 122

Query: 121 TSWINLTFWDELAHVASQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIER 180
           TSWI+LTFWDELAH+ASQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIER
Sbjct: 123 TSWISLTFWDELAHIASQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIER 182

Query: 181 SNSTAPHYDQDSSSMMAGMGYFFNLRLLDDTLFCFRILLFGVQSHFFPGRKLGSGAVDNM 240
           SNSTAPHYDQDS+S+MA                               GRK  SGAVDN 
Sbjct: 183 SNSTAPHYDQDSNSIMA-------------------------------GRKPSSGAVDNT 242

Query: 241 GSTQELWQAFFANPVDWWDNRKNKKNPKYPDFKHKDTGEALWVEGRYNPPWVKSQLALLD 300
            STQELWQAFFANPVDWWDNRKNKK+PKYPDFKHKDTGEALWVEGRYNPPWVKSQLALLD
Sbjct: 243 ASTQELWQAFFANPVDWWDNRKNKKSPKYPDFKHKDTGEALWVEGRYNPPWVKSQLALLD 296

Query: 301 MRMSSLDDQEAKMANFVTNFDFPSY 325
           MRMSSLDDQE KM NFV+NFDFPSY
Sbjct: 303 MRMSSLDDQEVKMTNFVSNFDFPSY 296

[Close]

BLAST of CaUC09G165110 vs. NCBI nr
Match: XP_004146958.1 (protein OSB2, chloroplastic isoform X1 [Cucumis sativus] >KGN44765.1 hypothetical protein Csa_016591 [Cucumis sativus])

HSP 1 Score: 516.5 bits (1329), Expect = 1.6e-142
Identity = 262/325 (80.62%), Postives = 272/325 (83.69%), Query Frame = 0


Query: 1   MIMALEQTLTLSSSLLSKNSIFSTFRNDLRITSFSTFLSHPNAPKHLRFATRFPKCSAME 60
           M+MALEQTL LSSSL SKNSIFS  RN L I+SF  F S+ N PKHLRF   FPKCSAME
Sbjct: 1   MVMALEQTLILSSSLSSKNSIFSIPRNQLPISSFFPFHSYLNPPKHLRFPAPFPKCSAME 60

Query: 61  NYINYS-VAYPKPSEIPWKKELSNSVSLIGTVGMPVELKHLTSGKDVAWTRLAVWKSSTE 120
           NY NYS V YPKPS+IPWKKELSNSV+LIGTVG+PVELKHL SGKDVAWTRLAVWKSSTE
Sbjct: 61  NYTNYSAVTYPKPSQIPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSSTE 120

Query: 121 TSWINLTFWDELAHVASQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIER 180
           TSWI LTFWDELAH+ASQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIER
Sbjct: 121 TSWIGLTFWDELAHIASQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIER 180

Query: 181 SNSTAPHYDQDSSSMMAGMGYFFNLRLLDDTLFCFRILLFGVQSHFFPGRKLGSGAVDNM 240
           SNSTAPHYDQDS+S+MA                               GRK GSGAVDN 
Sbjct: 181 SNSTAPHYDQDSNSIMA-------------------------------GRKPGSGAVDNT 240

Query: 241 GSTQELWQAFFANPVDWWDNRKNKKNPKYPDFKHKDTGEALWVEGRYNPPWVKSQLALLD 300
           GSTQELWQAFFANPVDWWDNRKNKKNPKYPDFKHKDTGEALWVEGRYNPPWVKSQLALLD
Sbjct: 241 GSTQELWQAFFANPVDWWDNRKNKKNPKYPDFKHKDTGEALWVEGRYNPPWVKSQLALLD 294

Query: 301 MRMSSLDDQEAKMANFVTNFDFPSY 325
           MRM SLDDQEAKMANFVT+FDFPSY
Sbjct: 301 MRMGSLDDQEAKMANFVTSFDFPSY 294

[Close]

BLAST of CaUC09G165110 vs. NCBI nr
Match: XP_022155802.1 (protein OSB2, chloroplastic-like isoform X1 [Momordica charantia])

HSP 1 Score: 491.1 bits (1263), Expect = 7.3e-135
Identity = 248/324 (76.54%), Postives = 266/324 (82.10%), Query Frame = 0


Query: 1   MIMALEQTLTLSSSLLSKNSIFSTFRNDLRITSFSTFLSHPNAPKHLRFATRFPKCSAME 60
           M+MALEQTL+LSSSLL K+++ S  RN  RI S    LSH +A K LRFA RFPKCSAME
Sbjct: 1   MVMALEQTLSLSSSLLPKHTLLSIPRNRFRIAS----LSHLDAAKRLRFARRFPKCSAME 60

Query: 61  NYINYSVAYPKPSEIPWKKELSNSVSLIGTVGMPVELKHLTSGKDVAWTRLAVWKSSTET 120
           N+ NYS +Y KP EIPW KELSNSVSLIGTVG PVE+KHL SGKDVAWTRLAVWKSSTET
Sbjct: 61  NFSNYSTSYRKPPEIPWSKELSNSVSLIGTVGTPVEIKHLASGKDVAWTRLAVWKSSTET 120

Query: 121 SWINLTFWDELAHVASQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIERS 180
           SWINLTFWDELAH+A QHVQKGNQI+VSGRLVADLVEADDGKQQTYYKVVVQQLNFIERS
Sbjct: 121 SWINLTFWDELAHIAFQHVQKGNQIHVSGRLVADLVEADDGKQQTYYKVVVQQLNFIERS 180

Query: 181 NSTAPHYDQDSSSMMAGMGYFFNLRLLDDTLFCFRILLFGVQSHFFPGRKLGSGAVDNMG 240
            STAPH+DQDS+S++A                               GRKLG+GA DNMG
Sbjct: 181 ISTAPHHDQDSNSIVA-------------------------------GRKLGNGAADNMG 240

Query: 241 STQELWQAFFANPVDWWDNRKNKKNPKYPDFKHKDTGEALWVEGRYNPPWVKSQLALLDM 300
           STQELWQAFFANPVDWWDNRKNKKNPKYPDFKHKDTGEALWVEGRYNPPWVKSQLA+LDM
Sbjct: 241 STQELWQAFFANPVDWWDNRKNKKNPKYPDFKHKDTGEALWVEGRYNPPWVKSQLAVLDM 289

Query: 301 RMSSLDDQEAKMANFVTNFDFPSY 325
           RM SLD+QEAKMANFVTN DFPSY
Sbjct: 301 RMGSLDEQEAKMANFVTNLDFPSY 289

[Close]

BLAST of CaUC09G165110 vs. ExPASy Swiss-Prot
Match: Q9SX99 (Protein OSB1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=OSB1 PE=1 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 6.0e-23
Identity = 75/247 (30.36%), Postives = 111/247 (44.94%), Query Frame = 0


Query: 69  YPKPSEIPWKKELSNSVSLIGTVGMPVELKHLTSGKDVAWTRLAVWK--SSTETSWINLT 128
           + KP     K  L NSVSL+G V   +++ +    +   +T L V    +   +  I+L 
Sbjct: 42  FKKPLSTKLKFNLVNSVSLMGFVDRSIQVMNTGPDRFGVFTILRVKDPLNPNRSFRISLR 101

Query: 129 FWDELAHVASQHVQKGNQIYVSGRLVADLVEADD--GKQQTYYKVVVQQLNFIERSNSTA 188
            WD +A     H++  + I VSGRL +    + D        Y+V V ++N++    +  
Sbjct: 102 MWDAMARTCIAHLKLNDHILVSGRLESYSKSSSDVYSGLNLDYQVKVAEVNYV----AAP 161

Query: 189 PHYDQDSSSMMAGMGYFFNLRLLDDTLFCFRILLFGVQSHFFPGRKLGSGAVDNMGSTQE 248
           P +  DS                              Q    P  K      ++      
Sbjct: 162 PSHVLDS------------------------------QISKNPKTKTEDDIEESKKDEIY 221

Query: 249 LWQAFFANPVDWWDNRKNKKNPKYPDFKHKDTGEALWVEGRYNPPWVKSQLALLDMRMSS 308
           LWQ FF+NP DWWDNR+NKKNPK PDFKHKDTGEALW+     P W+  +L L D +   
Sbjct: 222 LWQVFFSNPYDWWDNRRNKKNPKQPDFKHKDTGEALWLCSDL-PDWITRRLELFDQKNRF 253

Query: 309 LDDQEAK 312
            D+++ +
Sbjct: 282 YDEEKTR 253

[Close]

BLAST of CaUC09G165110 vs. ExPASy Swiss-Prot
Match: Q8GWJ4 (Protein OSB3, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=OSB3 PE=2 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 6.6e-22
Identity = 81/273 (29.67%), Postives = 130/273 (47.62%), Query Frame = 0


Query: 72  PSEIPWKKELSNSVSLIGTVGMPVELKHLTSGKDVAWTRLAVWKSSTETS-WINLTFWDE 131
           P +I +K E+SN ++LIG V  PV+    + GK  A T ++    S  ++ WI + F  +
Sbjct: 71  PKKIEYKPEISNWINLIGFVEQPVQFGPCSDGKFWAGTVISQRSGSKSSNFWIPIIFEGD 130

Query: 132 LAHVASQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIERSNSTAPHY--- 191
           LA +A QHV+K ++I+VSG+L  D    +    Q+  +V+VQ LNF++ + ST       
Sbjct: 131 LAKIAVQHVKKEDRIHVSGKLFIDSPPPNVTYSQSNVQVMVQNLNFVQAATSTTKTISPP 190

Query: 192 DQDSSSMMAGMGYFFNLRLLD-DTLFCFRILL--------------FGVQSHFFPGRKLG 251
           +++ +S+         ++++D +T   ++ L+               G+     P  K+ 
Sbjct: 191 EKEVTSIKKKPARSKKVKVIDEETSNSWKHLIENPKEWLDHRGNKANGLVKPGHPDFKMK 250

Query: 252 SGAVDNMGST------------------------------QELWQAFFANPVDWWDNRKN 296
            G +    ST                              +E W+    NP  W DNR +
Sbjct: 251 VGGLSLWLSTAPDWALLKLEELKFDVLVPKGNIKLNQLKGEESWKDLVQNPDKWLDNRSD 310

[Close]

BLAST of CaUC09G165110 vs. ExPASy Swiss-Prot
Match: Q8GXH3 (Protein OSB2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OSB2 PE=1 SV=2)

HSP 1 Score: 100.9 bits (250), Expect = 2.8e-20
Identity = 81/286 (28.32%), Postives = 124/286 (43.36%), Query Frame = 0


Query: 70  PKPSEIPWKKELSNSVSLIGTVGMPVELKHLTSGKDVAWTRLAVWKSSTETS-WINLTFW 129
           P+P+EI ++ E++N V+LIG V  PV+ +  + GK  A T ++   +S  +  WI + F 
Sbjct: 86  PRPNEIAYESEVANWVNLIGFVDQPVQFEASSDGKFWAGTVISQRSASDSSGFWIPIIFE 145

Query: 130 DELAHVASQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIE-RSNSTAPHY 189
            +LA  A+++V K +QI+VSG+L  D    +    Q   +V+VQ LNFI+  S S +P  
Sbjct: 146 GDLAKTAARYVSKDDQIHVSGKLFIDSPPPNMTYAQANVQVLVQNLNFIQPMSPSPSPFM 205

Query: 190 DQDSSSMMAGMGYFFNLRLLDDTLF----------------------------------- 249
              SS            R   D +                                    
Sbjct: 206 VMSSSEKEESGIKKQPARAKQDIVIDEASDSWNHLIENPKEWWDHRENKVNGLVKPRHPD 265

Query: 250 ------CFRILLFGVQSHFFPGRK-------LGSGAVDNMGSTQELWQAFFANPVDWWDN 306
                  F + L    +   P  +       +    V      +E W+    NP  WWDN
Sbjct: 266 FKSKDSSFSLWLNKAPNWVLPKLEGLEFDVLVPKARVVKQLKGEESWKDLVQNPDKWWDN 325

[Close]

BLAST of CaUC09G165110 vs. ExPASy Swiss-Prot
Match: Q9FYJ2 (Protein OSB4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OSB4 PE=2 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 8.1e-20
Identity = 77/290 (26.55%), Postives = 134/290 (46.21%), Query Frame = 0


Query: 66  SVAYPKPSEIPWKKELSNSVSLIGTVGMPVELKHLTSGKDVAWTRLAVWKSSTETS---- 125
           S  +P+P E+P++ +++NS+ LIG V  PV+      GK  A T ++   SS   S    
Sbjct: 56  SEEWPRPMEVPYQPKIANSIDLIGYVHQPVQFDSTLDGKFWAGTVISHEPSSDSKSESDS 115

Query: 126 ----WINLTFWDELAHVASQHVQKGNQIYVSGRLVADLVEADDGKQQTY----------- 185
               WI + F  +LAH A+ +++K ++++++G+++ D++++     Q +           
Sbjct: 116 SSNFWIPVLFEGDLAHTANSYLKKNDRVHITGQILGDVIQSGANSDQAHVQLFKSFHGSF 175

Query: 186 -YKVVVQQLNFIERSNS---TAPHYDQD------SSSMMAGMGYFFNL--RLLD-DTLFC 245
            ++V+V+ L++IE S +     P  DQ+      S+S+  G  +  NL   L+D    +C
Sbjct: 176 SHQVMVRDLHYIEGSKAMPKVLPTLDQNEGVLKHSASVQRGREFGTNLWFDLVDKPNEWC 235

Query: 246 --FRILLFGVQSHFFPGRKLGSGA--------------------------VDNMGSTQEL 296
               +   G  +   P  K   G+                               + +E 
Sbjct: 236 DYREMKQNGSVNPKHPDFKKKDGSQALWLNNAPTEILSELKDVKFDIPKYAKQPKAGEES 295

[Close]

BLAST of CaUC09G165110 vs. ExPASy Swiss-Prot
Match: Q9KUW2 (Single-stranded DNA-binding protein OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) OX=243277 GN=ssb PE=3 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 2.1e-07
Identity = 33/104 (31.73%), Postives = 55/104 (52.88%), Query Frame = 0


Query: 83  NSVSLIGTVGMPVELKHLTSGKDVA---------WTRLAVWKSSTETSWINLTFWDELAH 142
           N V LIG +G   E++++ SG  VA         W   A  +   +T W  +T + +LA 
Sbjct: 7   NKVILIGNLGQDPEVRYMPSGGAVANITIATSETWRDKATGEQKEKTEWHRVTLYGKLAE 66

Query: 143 VASQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFI 178
           VA ++++KG+Q+Y+ G+L     +   G+ +   +VVVQ  N I
Sbjct: 67  VAGEYLRKGSQVYIEGQLQTRKWQDQSGQDRYSTEVVVQGYNGI 110

[Close]

BLAST of CaUC09G165110 vs. ExPASy TrEMBL
Match: A0A1S3BRV3 (protein OSB2, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103492617 PE=4 SV=1)

HSP 1 Score: 519.6 bits (1337), Expect = 9.2e-144
Identity = 263/325 (80.92%), Postives = 273/325 (84.00%), Query Frame = 0


Query: 1   MIMALEQTLTLSSSLLSKNSIFSTFRNDLRITSFSTFLSHPNAPKHLRFATRFPKCSAME 60
           M +ALEQTLTLSSS  SKNSIFS  RN LRI+SF  F S+ N PKHLRFATRFPKCSAME
Sbjct: 3   MALALEQTLTLSSSFSSKNSIFSIPRNQLRISSFFPFHSYLNPPKHLRFATRFPKCSAME 62

Query: 61  NYINYS-VAYPKPSEIPWKKELSNSVSLIGTVGMPVELKHLTSGKDVAWTRLAVWKSSTE 120
           NY NYS V YPKPSEIPWKKELSNSV+LIGTVG+PVELKHL SGKDVAWTRLAVWKSSTE
Sbjct: 63  NYTNYSAVTYPKPSEIPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSSTE 122

Query: 121 TSWINLTFWDELAHVASQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIER 180
           TSWI+LTFWDELAH+ASQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIER
Sbjct: 123 TSWISLTFWDELAHIASQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIER 182

Query: 181 SNSTAPHYDQDSSSMMAGMGYFFNLRLLDDTLFCFRILLFGVQSHFFPGRKLGSGAVDNM 240
           SNSTAPHYDQDS+S+MA                               GRK  SGAVDN 
Sbjct: 183 SNSTAPHYDQDSNSIMA-------------------------------GRKPSSGAVDNT 242

Query: 241 GSTQELWQAFFANPVDWWDNRKNKKNPKYPDFKHKDTGEALWVEGRYNPPWVKSQLALLD 300
            STQELWQAFFANPVDWWDNRKNKKNPKYPDFKHKDTGEALWVEGRYNPPWVKSQLALLD
Sbjct: 243 ASTQELWQAFFANPVDWWDNRKNKKNPKYPDFKHKDTGEALWVEGRYNPPWVKSQLALLD 296

Query: 301 MRMSSLDDQEAKMANFVTNFDFPSY 325
           MRMSSLDDQE KM NFV+NFDFPSY
Sbjct: 303 MRMSSLDDQEVKMTNFVSNFDFPSY 296

[Close]

BLAST of CaUC09G165110 vs. ExPASy TrEMBL
Match: A0A5D3DR47 (Protein OSB2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold111G00530 PE=4 SV=1)

HSP 1 Score: 517.7 bits (1332), Expect = 3.5e-143
Identity = 262/325 (80.62%), Postives = 273/325 (84.00%), Query Frame = 0


Query: 1   MIMALEQTLTLSSSLLSKNSIFSTFRNDLRITSFSTFLSHPNAPKHLRFATRFPKCSAME 60
           M +ALEQTLTLSSS  SKNSIFS  RN LRI+SF  F S+ N PKHLRFATRFPKCSAME
Sbjct: 3   MALALEQTLTLSSSFSSKNSIFSIPRNQLRISSFFPFHSYLNPPKHLRFATRFPKCSAME 62

Query: 61  NYINYS-VAYPKPSEIPWKKELSNSVSLIGTVGMPVELKHLTSGKDVAWTRLAVWKSSTE 120
           NY NYS V YPKPSEIPWKKELSNSV+LIGTVG+PVELKHL SGKDVAWTRLAVWKSSTE
Sbjct: 63  NYTNYSAVTYPKPSEIPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSSTE 122

Query: 121 TSWINLTFWDELAHVASQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIER 180
           TSWI+LTFWDELAH+ASQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIER
Sbjct: 123 TSWISLTFWDELAHIASQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIER 182

Query: 181 SNSTAPHYDQDSSSMMAGMGYFFNLRLLDDTLFCFRILLFGVQSHFFPGRKLGSGAVDNM 240
           SNSTAPHYDQDS+S+MA                               GRK  SGAVDN 
Sbjct: 183 SNSTAPHYDQDSNSIMA-------------------------------GRKPSSGAVDNT 242

Query: 241 GSTQELWQAFFANPVDWWDNRKNKKNPKYPDFKHKDTGEALWVEGRYNPPWVKSQLALLD 300
            STQELWQAFFANPVDWWDNRKNKK+PKYPDFKHKDTGEALWVEGRYNPPWVKSQLALLD
Sbjct: 243 ASTQELWQAFFANPVDWWDNRKNKKSPKYPDFKHKDTGEALWVEGRYNPPWVKSQLALLD 296

Query: 301 MRMSSLDDQEAKMANFVTNFDFPSY 325
           MRMSSLDDQE KM NFV+NFDFPSY
Sbjct: 303 MRMSSLDDQEVKMTNFVSNFDFPSY 296

[Close]

BLAST of CaUC09G165110 vs. ExPASy TrEMBL
Match: A0A0A0K4W2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G378540 PE=4 SV=1)

HSP 1 Score: 516.5 bits (1329), Expect = 7.8e-143
Identity = 262/325 (80.62%), Postives = 272/325 (83.69%), Query Frame = 0


Query: 1   MIMALEQTLTLSSSLLSKNSIFSTFRNDLRITSFSTFLSHPNAPKHLRFATRFPKCSAME 60
           M+MALEQTL LSSSL SKNSIFS  RN L I+SF  F S+ N PKHLRF   FPKCSAME
Sbjct: 1   MVMALEQTLILSSSLSSKNSIFSIPRNQLPISSFFPFHSYLNPPKHLRFPAPFPKCSAME 60

Query: 61  NYINYS-VAYPKPSEIPWKKELSNSVSLIGTVGMPVELKHLTSGKDVAWTRLAVWKSSTE 120
           NY NYS V YPKPS+IPWKKELSNSV+LIGTVG+PVELKHL SGKDVAWTRLAVWKSSTE
Sbjct: 61  NYTNYSAVTYPKPSQIPWKKELSNSVTLIGTVGLPVELKHLPSGKDVAWTRLAVWKSSTE 120

Query: 121 TSWINLTFWDELAHVASQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIER 180
           TSWI LTFWDELAH+ASQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIER
Sbjct: 121 TSWIGLTFWDELAHIASQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIER 180

Query: 181 SNSTAPHYDQDSSSMMAGMGYFFNLRLLDDTLFCFRILLFGVQSHFFPGRKLGSGAVDNM 240
           SNSTAPHYDQDS+S+MA                               GRK GSGAVDN 
Sbjct: 181 SNSTAPHYDQDSNSIMA-------------------------------GRKPGSGAVDNT 240

Query: 241 GSTQELWQAFFANPVDWWDNRKNKKNPKYPDFKHKDTGEALWVEGRYNPPWVKSQLALLD 300
           GSTQELWQAFFANPVDWWDNRKNKKNPKYPDFKHKDTGEALWVEGRYNPPWVKSQLALLD
Sbjct: 241 GSTQELWQAFFANPVDWWDNRKNKKNPKYPDFKHKDTGEALWVEGRYNPPWVKSQLALLD 294

Query: 301 MRMSSLDDQEAKMANFVTNFDFPSY 325
           MRM SLDDQEAKMANFVT+FDFPSY
Sbjct: 301 MRMGSLDDQEAKMANFVTSFDFPSY 294

[Close]

BLAST of CaUC09G165110 vs. ExPASy TrEMBL
Match: A0A6J1DQC6 (protein OSB2, chloroplastic-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111022838 PE=4 SV=1)

HSP 1 Score: 491.1 bits (1263), Expect = 3.5e-135
Identity = 248/324 (76.54%), Postives = 266/324 (82.10%), Query Frame = 0


Query: 1   MIMALEQTLTLSSSLLSKNSIFSTFRNDLRITSFSTFLSHPNAPKHLRFATRFPKCSAME 60
           M+MALEQTL+LSSSLL K+++ S  RN  RI S    LSH +A K LRFA RFPKCSAME
Sbjct: 1   MVMALEQTLSLSSSLLPKHTLLSIPRNRFRIAS----LSHLDAAKRLRFARRFPKCSAME 60

Query: 61  NYINYSVAYPKPSEIPWKKELSNSVSLIGTVGMPVELKHLTSGKDVAWTRLAVWKSSTET 120
           N+ NYS +Y KP EIPW KELSNSVSLIGTVG PVE+KHL SGKDVAWTRLAVWKSSTET
Sbjct: 61  NFSNYSTSYRKPPEIPWSKELSNSVSLIGTVGTPVEIKHLASGKDVAWTRLAVWKSSTET 120

Query: 121 SWINLTFWDELAHVASQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIERS 180
           SWINLTFWDELAH+A QHVQKGNQI+VSGRLVADLVEADDGKQQTYYKVVVQQLNFIERS
Sbjct: 121 SWINLTFWDELAHIAFQHVQKGNQIHVSGRLVADLVEADDGKQQTYYKVVVQQLNFIERS 180

Query: 181 NSTAPHYDQDSSSMMAGMGYFFNLRLLDDTLFCFRILLFGVQSHFFPGRKLGSGAVDNMG 240
            STAPH+DQDS+S++A                               GRKLG+GA DNMG
Sbjct: 181 ISTAPHHDQDSNSIVA-------------------------------GRKLGNGAADNMG 240

Query: 241 STQELWQAFFANPVDWWDNRKNKKNPKYPDFKHKDTGEALWVEGRYNPPWVKSQLALLDM 300
           STQELWQAFFANPVDWWDNRKNKKNPKYPDFKHKDTGEALWVEGRYNPPWVKSQLA+LDM
Sbjct: 241 STQELWQAFFANPVDWWDNRKNKKNPKYPDFKHKDTGEALWVEGRYNPPWVKSQLAVLDM 289

Query: 301 RMSSLDDQEAKMANFVTNFDFPSY 325
           RM SLD+QEAKMANFVTN DFPSY
Sbjct: 301 RMGSLDEQEAKMANFVTNLDFPSY 289

[Close]

BLAST of CaUC09G165110 vs. ExPASy TrEMBL
Match: A0A6J1JVR7 (protein OSB2, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111487976 PE=4 SV=1)

HSP 1 Score: 485.3 bits (1248), Expect = 1.9e-133
Identity = 251/320 (78.44%), Postives = 261/320 (81.56%), Query Frame = 0


Query: 1   MIMALEQTLTLSSSLLSKNSIFSTFRNDLRITSFSTFLSHPNAPKHLRFATRFPKCSAME 60
           MIMA+E+TLTLSSS LSKN IFS  RN  R+ SFS F SH NA KH RFATRF KC AME
Sbjct: 1   MIMAVEKTLTLSSSFLSKNCIFSFSRNKSRVASFSHFPSHLNAAKHSRFATRFLKCLAME 60

Query: 61  NYINYSVAYPKPSEIPWKKELSNSVSLIGTVGMPVELKHLTSGKDVAWTRLAVWKSSTET 120
           NY  YSV+YPKPSEIPWKKELSNSVSLIGTVG PVELKHL SGKDVA TRLAVWKSSTET
Sbjct: 61  NYSIYSVSYPKPSEIPWKKELSNSVSLIGTVGTPVELKHLPSGKDVARTRLAVWKSSTET 120

Query: 121 SWINLTFWDELAHVASQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIERS 180
           SWINL FWDELAHVASQH+QKGNQIYVSGR+VAD+VEADDGKQQTY+KVVVQQLNFIERS
Sbjct: 121 SWINLAFWDELAHVASQHIQKGNQIYVSGRMVADVVEADDGKQQTYHKVVVQQLNFIERS 180

Query: 181 NSTAPHYDQDSSSMMAGMGYFFNLRLLDDTLFCFRILLFGVQSHFFPGRKLGSGAVDNM- 240
           NS APH DQDS+S M                                GRKLGSGAVDNM 
Sbjct: 181 NSAAPHCDQDSNSAM-------------------------------EGRKLGSGAVDNMG 240

Query: 241 GSTQELWQAFFANPVDWWDNRKNKKNPKYPDFKHKDTGEALWVEGRYNPPWVKSQLALLD 300
           GSTQELWQAFFANPV+WWDNRKNKKNPKYPDFKHKDTGEALWVEGR NPPWVKSQLALLD
Sbjct: 241 GSTQELWQAFFANPVNWWDNRKNKKNPKYPDFKHKDTGEALWVEGRNNPPWVKSQLALLD 289

Query: 301 MRMSSLDDQEAKMANFVTNF 320
           MRM SLDDQEAKMANFV NF
Sbjct: 301 MRMGSLDDQEAKMANFVNNF 289

[Close]

BLAST of CaUC09G165110 vs. TAIR 10
Match: AT1G47720.1 (Primosome PriB/single-strand DNA-binding )

HSP 1 Score: 109.8 bits (273), Expect = 4.2e-24
Identity = 75/247 (30.36%), Postives = 111/247 (44.94%), Query Frame = 0


Query: 69  YPKPSEIPWKKELSNSVSLIGTVGMPVELKHLTSGKDVAWTRLAVWK--SSTETSWINLT 128
           + KP     K  L NSVSL+G V   +++ +    +   +T L V    +   +  I+L 
Sbjct: 42  FKKPLSTKLKFNLVNSVSLMGFVDRSIQVMNTGPDRFGVFTILRVKDPLNPNRSFRISLR 101

Query: 129 FWDELAHVASQHVQKGNQIYVSGRLVADLVEADD--GKQQTYYKVVVQQLNFIERSNSTA 188
            WD +A     H++  + I VSGRL +    + D        Y+V V ++N++    +  
Sbjct: 102 MWDAMARTCIAHLKLNDHILVSGRLESYSKSSSDVYSGLNLDYQVKVAEVNYV----AAP 161

Query: 189 PHYDQDSSSMMAGMGYFFNLRLLDDTLFCFRILLFGVQSHFFPGRKLGSGAVDNMGSTQE 248
           P +  DS                              Q    P  K      ++      
Sbjct: 162 PSHVLDS------------------------------QISKNPKTKTEDDIEESKKDEIY 221

Query: 249 LWQAFFANPVDWWDNRKNKKNPKYPDFKHKDTGEALWVEGRYNPPWVKSQLALLDMRMSS 308
           LWQ FF+NP DWWDNR+NKKNPK PDFKHKDTGEALW+     P W+  +L L D +   
Sbjct: 222 LWQVFFSNPYDWWDNRRNKKNPKQPDFKHKDTGEALWLCSDL-PDWITRRLELFDQKNRF 253

Query: 309 LDDQEAK 312
            D+++ +
Sbjct: 282 YDEEKTR 253

[Close]

BLAST of CaUC09G165110 vs. TAIR 10
Match: AT5G44785.1 (organellar single-stranded DNA binding protein 3 )

HSP 1 Score: 106.3 bits (264), Expect = 4.7e-23
Identity = 81/273 (29.67%), Postives = 130/273 (47.62%), Query Frame = 0


Query: 72  PSEIPWKKELSNSVSLIGTVGMPVELKHLTSGKDVAWTRLAVWKSSTETS-WINLTFWDE 131
           P +I +K E+SN ++LIG V  PV+    + GK  A T ++    S  ++ WI + F  +
Sbjct: 71  PKKIEYKPEISNWINLIGFVEQPVQFGPCSDGKFWAGTVISQRSGSKSSNFWIPIIFEGD 130

Query: 132 LAHVASQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIERSNSTAPHY--- 191
           LA +A QHV+K ++I+VSG+L  D    +    Q+  +V+VQ LNF++ + ST       
Sbjct: 131 LAKIAVQHVKKEDRIHVSGKLFIDSPPPNVTYSQSNVQVMVQNLNFVQAATSTTKTISPP 190

Query: 192 DQDSSSMMAGMGYFFNLRLLD-DTLFCFRILL--------------FGVQSHFFPGRKLG 251
           +++ +S+         ++++D +T   ++ L+               G+     P  K+ 
Sbjct: 191 EKEVTSIKKKPARSKKVKVIDEETSNSWKHLIENPKEWLDHRGNKANGLVKPGHPDFKMK 250

Query: 252 SGAVDNMGST------------------------------QELWQAFFANPVDWWDNRKN 296
            G +    ST                              +E W+    NP  W DNR +
Sbjct: 251 VGGLSLWLSTAPDWALLKLEELKFDVLVPKGNIKLNQLKGEESWKDLVQNPDKWLDNRSD 310

[Close]

BLAST of CaUC09G165110 vs. TAIR 10
Match: AT5G44785.2 (organellar single-stranded DNA binding protein 3 )

HSP 1 Score: 105.5 bits (262), Expect = 8.0e-23
Identity = 81/275 (29.45%), Postives = 130/275 (47.27%), Query Frame = 0


Query: 72  PSEIPWKKELSNSVSLIGTVGMPVELKHLTSGKDVAWTRLAVWKSSTETS-WINLTFWDE 131
           P +I +K E+SN ++LIG V  PV+    + GK  A T ++    S  ++ WI + F  +
Sbjct: 71  PKKIEYKPEISNWINLIGFVEQPVQFGPCSDGKFWAGTVISQRSGSKSSNFWIPIIFEGD 130

Query: 132 LAHVASQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIERSNSTAPHY--- 191
           LA +A QHV+K ++I+VSG+L  D    +    Q+  +V+VQ LNF++ + ST       
Sbjct: 131 LAKIAVQHVKKEDRIHVSGKLFIDSPPPNVTYSQSNVQVMVQNLNFVQAATSTTKTISPP 190

Query: 192 DQDSSSMMAGMGYFFNLRLLD-DTLFCFRILL--------------FGVQSHFFPGRKLG 251
           +++ +S+         ++++D +T   ++ L+               G+     P  K+ 
Sbjct: 191 EKEVTSIKKKPARSKKVKVIDEETSNSWKHLIENPKEWLDHRGNKANGLVKPGHPDFKMK 250

Query: 252 SGAVDNMGST--------------------------------QELWQAFFANPVDWWDNR 296
            G +    ST                                +E W+    NP  W DNR
Sbjct: 251 VGGLSLWLSTAPDWALLKLEELKFDVLVPKGNIKLNQLKDIGEESWKDLVQNPDKWLDNR 310

[Close]

BLAST of CaUC09G165110 vs. TAIR 10
Match: AT4G20010.2 (plastid transcriptionally active 9 )

HSP 1 Score: 103.2 bits (256), Expect = 4.0e-22
Identity = 81/286 (28.32%), Postives = 132/286 (46.15%), Query Frame = 0


Query: 70  PKPSEIPWKKELSNSVSLIGTVGMPVELKHLTSGKDVAWTRLAVWKSSTETS-WINLTFW 129
           P+P+EI ++ E++N V+LIG V  PV+ +  + GK  A T ++   +S  +  WI + F 
Sbjct: 86  PRPNEIAYESEVANWVNLIGFVDQPVQFEASSDGKFWAGTVISQRSASDSSGFWIPIIFE 145

Query: 130 DELAHVASQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIE-RSNSTAPHY 189
            +LA  A+++V K +QI+VSG+L  D    +    Q   +V+VQ LNFI+  S S +P  
Sbjct: 146 GDLAKTAARYVSKDDQIHVSGKLFIDSPPPNMTYAQANVQVLVQNLNFIQPMSPSPSPFM 205

Query: 190 -----DQDSSSMMAGMGYFFNLRLLDDTLFCFRILLFGVQSHFFPGRKLGSGAV------ 249
                +++ S +    G      ++D+    +  L+   +  +       +G V      
Sbjct: 206 VMSSSEKEESGIKKQPGIAKQDIVIDEASDSWNHLIENPKEWWDHRENKVNGLVKPRHPD 265

Query: 250 ----DNMGST---------------------------------QELWQAFFANPVDWWDN 306
               D+  S                                  +E W+    NP  WWDN
Sbjct: 266 FKSKDSSFSLWLNKAPNWVLPKLEGLEFDVLVPKARVVKQLKGEESWKDLVQNPDKWWDN 325

[Close]

BLAST of CaUC09G165110 vs. TAIR 10
Match: AT4G20010.1 (plastid transcriptionally active 9 )

HSP 1 Score: 100.9 bits (250), Expect = 2.0e-21
Identity = 81/286 (28.32%), Postives = 124/286 (43.36%), Query Frame = 0


Query: 70  PKPSEIPWKKELSNSVSLIGTVGMPVELKHLTSGKDVAWTRLAVWKSSTETS-WINLTFW 129
           P+P+EI ++ E++N V+LIG V  PV+ +  + GK  A T ++   +S  +  WI + F 
Sbjct: 86  PRPNEIAYESEVANWVNLIGFVDQPVQFEASSDGKFWAGTVISQRSASDSSGFWIPIIFE 145

Query: 130 DELAHVASQHVQKGNQIYVSGRLVADLVEADDGKQQTYYKVVVQQLNFIE-RSNSTAPHY 189
            +LA  A+++V K +QI+VSG+L  D    +    Q   +V+VQ LNFI+  S S +P  
Sbjct: 146 GDLAKTAARYVSKDDQIHVSGKLFIDSPPPNMTYAQANVQVLVQNLNFIQPMSPSPSPFM 205

Query: 190 DQDSSSMMAGMGYFFNLRLLDDTLF----------------------------------- 249
              SS            R   D +                                    
Sbjct: 206 VMSSSEKEESGIKKQPARAKQDIVIDEASDSWNHLIENPKEWWDHRENKVNGLVKPRHPD 265

Query: 250 ------CFRILLFGVQSHFFPGRK-------LGSGAVDNMGSTQELWQAFFANPVDWWDN 306
                  F + L    +   P  +       +    V      +E W+    NP  WWDN
Sbjct: 266 FKSKDSSFSLWLNKAPNWVLPKLEGLEFDVLVPKARVVKQLKGEESWKDLVQNPDKWWDN 325

The following BLAST results are available for this feature:

BLAST of CaUC09G165110 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038896738.1	2.1e-150	83.95	protein OSB2, chloroplastic-like [Benincasa hispida]	[more]
XP_008451268.1	1.9e-143	80.92	PREDICTED: protein OSB2, chloroplastic-like [Cucumis melo]	[more]
KAA0059696.1	7.3e-143	80.62	protein OSB2 [Cucumis melo var. makuwa] >TYK26133.1 protein OSB2 [Cucumis melo v...	[more]
XP_004146958.1	1.6e-142	80.62	protein OSB2, chloroplastic isoform X1 [Cucumis sativus] >KGN44765.1 hypothetica...	[more]
XP_022155802.1	7.3e-135	76.54	protein OSB2, chloroplastic-like isoform X1 [Momordica charantia]	[more]

BLAST of CaUC09G165110 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SX99	6.0e-23	30.36	Protein OSB1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=OSB1 PE=1 SV=1	[more]
Q8GWJ4	6.6e-22	29.67	Protein OSB3, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=OSB...	[more]
Q8GXH3	2.8e-20	28.32	Protein OSB2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OSB2 PE=1 SV=2	[more]
Q9FYJ2	8.1e-20	26.55	Protein OSB4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OSB4 PE=2 SV=1	[more]
Q9KUW2	2.1e-07	31.73	Single-stranded DNA-binding protein OS=Vibrio cholerae serotype O1 (strain ATCC ...	[more]

BLAST of CaUC09G165110 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BRV3	9.2e-144	80.92	protein OSB2, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103492617 PE=4 SV...	[more]
A0A5D3DR47	3.5e-143	80.62	Protein OSB2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold111G00530 P...	[more]
A0A0A0K4W2	7.8e-143	80.62	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G378540 PE=4 SV=1	[more]
A0A6J1DQC6	3.5e-135	76.54	protein OSB2, chloroplastic-like isoform X1 OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A6J1JVR7	1.9e-133	78.44	protein OSB2, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111487976 PE=...	[more]

BLAST of CaUC09G165110 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G47720.1	4.2e-24	30.36	Primosome PriB/single-strand DNA-binding	[more]
AT5G44785.1	4.7e-23	29.67	organellar single-stranded DNA binding protein 3	[more]
AT5G44785.2	8.0e-23	29.45	organellar single-stranded DNA binding protein 3	[more]
AT4G20010.2	4.0e-22	28.32	plastid transcriptionally active 9	[more]
AT4G20010.1	2.0e-21	28.32	plastid transcriptionally active 9	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011344	Single-stranded DNA-binding protein	TIGRFAM	TIGR00621	TIGR00621	coord: 83..182 e-value: 1.2E-16 score: 59.4
IPR011344	Single-stranded DNA-binding protein	PANTHER	PTHR10302	SINGLE-STRANDED DNA-BINDING PROTEIN	coord: 23..316
IPR000424	Primosome PriB/single-strand DNA-binding	PFAM	PF00436	SSB	coord: 83..176 e-value: 2.4E-17 score: 62.9
IPR000424	Primosome PriB/single-strand DNA-binding	PROSITE	PS50935	SSB	coord: 81..178 score: 21.78842
IPR000424	Primosome PriB/single-strand DNA-binding	CDD	cd04496	SSB_OBF	coord: 85..177 e-value: 1.11076E-19 score: 80.7341
None	No IPR available	GENE3D	2.40.50.140		coord: 79..186 e-value: 1.6E-21 score: 78.5
None	No IPR available	PANTHER	PTHR10302:SF15	OS03G0633900 PROTEIN	coord: 23..316
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 83..291

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC09G165110.1	CaUC09G165110.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006264	mitochondrial DNA replication
biological_process	GO:0051096	positive regulation of helicase activity
biological_process	GO:0006260	DNA replication
cellular_component	GO:0042645	mitochondrial nucleoid
molecular_function	GO:0003697	single-stranded DNA binding