CaUC09G164290 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC09G164290
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Histone H2A
Location	Ciama_Chr09: 5976109 .. 5978067 (-)
RNA-Seq Expression	CaUC09G164290
Synteny	CaUC09G164290

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTTCCACCGACATTCCGGCGAAGGGCGGTAGAGGCAGGAAAGCGACCACCAAGTCCGTTTCCAGGTCTCACAAGGCCGGTCTCCAATTTCCCGTCGGCCGTATCGCCAGGTATCTCAAGAAAGGCCGTTATGCACAACGCGTCGGCTCAGGCTCCCCGGTCTACCTTTCCGCCGTCCTCGAATATCTTGCTGCTGAGGTTTGTAATCGCTTACTTCACTTCGAGTTCTATTCTTCAGTTCCCAGTTTCTCAGTGTTCTGATTTGGGTATTCTGTTTTCATTTAGGTTTTGGAGTTAGCGGGCAATGCTGCGAGGGACAACAAGAAGAACAGAATCATTCCAAGGCATATTCAGCTTGCGGTGAGGAACGATGAGGAATTGAGCAAGCTTTTGGGATCGGTTACGATTGCAAGCGGAGGAGTAATGCCGAAGATCCACCAGTCTCTTTTACCGAAGAAGGCCGGGAATGCGAAAGACAAGTCTGAAATCGGATCGGCGTCTCAGGAATTCTAGGTTACAGATGAAATCGCCATTAATGAATAGAATTAAATAGTTAGTTAGGTTATGGTAGATTTTGTCATTAGTTTCAATGAATCAGATCATAGTTCTTTTGGTATGTAAATTCGCGAAACGAATTTCGCTTAGGTTAGTATCTGTCATCGTCGTCGTTTAAATTTTCTATTATTTAGTGTAAATGCCGATGAAGTTCAACGCTAATTTGAATCGATAGAAACTATTCGAGTTTTCAATTACCTATACATCTAAATTTGCTCATCAGCCGAACGAGAATTACGAGATGTGACATCGTTGAAATTCGAAATCTTCAAAGTATTTATTTACTTGGCCCAATAAATTTAAATATTTTAAAATAAAATGTTAAATTAGTTGCTAATTTGTTTGTTTTTCGTTTCTCTCTCTGTATATATGATTGGAATTCTTCTTCCTTAAGCCCTCGATATTTATTTTTTTCTCTGTCAAGTTACACATTCTCTAGGGTTTCGATCATCCGCCGGAAAAGATCGTAGAATGAGTTCATCGGCTTCTACCAAGGGCGGCAGAGGGAAACCCAAAGCCACGAAGTCTGTTTCTCGGTCTCAGAAGGCTGGTCTTCAGTTCCCCGTCGGCCGTATTGCGCGATTTCTTAAAGCCGGTAAGTATGCGGAGCGTGTCGGTGCTGGTGCTCCCGTCTACCTCTCCGCCGTCCTCGAATATCTGGCCGCCGAGGTTAGTGCTTGATCTTCGAATCGGATCTTTTGCTTTCGTTTCTGATCTGTTTGTTTGCTACGTCTTTATGTGACGAAGTAGGGTGTTGTGGTGTACTGTTCTGATCACTTGGGTTTCTTCTGTTTTGGGTCTGGAATCGGTTTGGAACAGAGGAATTTCCATTTTTTGTGTGATCAGTATATAAACTGATGAAGAAACTGCTAATGATTATGAAATTAGGGTTTGGGATTGCATGGAAATGTAGTTACCATCATTGCTTTCGGAATAGTAATCTTGAGCTTTGAATGTGGCCTTCCTTTTGCCCTTGCATTGCTTCTAGTTGGCTAGAAGTTTGAACTCAATGCAGATTCTTTAGTTTTGCGTACTGAATAAGGTGATAGAACCACAAGACTATGTTGGTTGTTTCTTTAGATGAATGAAACTTCGCTTATGTTCATCCCCTTAATTTTCTTAGCAATGATGATGATTTGGATTTGCATTTGAAGTAGCTGTATATACTTCCATTTGTAGGTGCTTGAGCTTGCAGGCAATGCTGCCAGAGACAACAAGAAGAATCGCATTGTTCCAAGACACATACAGCTTGCTGTCCGCAACGACGAAGAGCTAAGCAAGCTTTTGGGTGATGTGACCATTGCAAATGGTGGTGTGTTACCAAATATCCATCAAAATCTCTTGCCTAAGAAGGCAGGATCAGGCAAAGGTGACATTGGATCTGCATCACAAGAGTTCTAA

mRNA sequence

ATGAGTTCCACCGACATTCCGGCGAAGGGCGGTAGAGGCAGGAAAGCGACCACCAAGTCCGTTTCCAGGTCTCACAAGGCCGGTCTCCAATTTCCCGTCGGCCGTATCGCCAGGTATCTCAAGAAAGGCCGTTATGCACAACGCGTCGGCTCAGGCTCCCCGGTCTACCTTTCCGCCGTCCTCGAATATCTTGCTGCTGAGGTTTTGGAGTTAGCGGGCAATGCTGCGAGGGACAACAAGAAGAACAGAATCATTCCAAGGCATATTCAGCTTGCGGTGAGGAACGATGAGGAATTGAGCAAGCTTTTGGGATCGGTTACGATTGCAAGCGGAGGAGTAATGCCGAAGATCCACCAGTCTCTTTTACCGAAGAAGGCCGGGAATGCGAAAGACAACCGAACGAGAATTACGAGATGTGACATCGTTGAAATTCGAAATCTTCAAATTACACATTCTCTAGGGTTTCGATCATCCGCCGGAAAAGATCGTAGAATGAGTTCATCGGCTTCTACCAAGGGCGGCAGAGGGAAACCCAAAGCCACGAAGTCTGTTTCTCGGTCTCAGAAGGCTGGTCTTCAGTTCCCCGTCGGCCGTATTGCGCGATTTCTTAAAGCCGGTAAGTATGCGGAGCGTGTCGGTGCTGGTGCTCCCGTCTACCTCTCCGCCGTCCTCGAATATCTGGCCGCCGAGGTGCTTGAGCTTGCAGGCAATGCTGCCAGAGACAACAAGAAGAATCGCATTGTTCCAAGACACATACAGCTTGCTGTCCGCAACGACGAAGAGCTAAGCAAGCTTTTGGGTGATGTGACCATTGCAAATGGTGGTGTGTTACCAAATATCCATCAAAATCTCTTGCCTAAGAAGGCAGGATCAGGCAAAGGTGACATTGGATCTGCATCACAAGAGTTCTAA

Coding sequence (CDS)

ATGAGTTCCACCGACATTCCGGCGAAGGGCGGTAGAGGCAGGAAAGCGACCACCAAGTCCGTTTCCAGGTCTCACAAGGCCGGTCTCCAATTTCCCGTCGGCCGTATCGCCAGGTATCTCAAGAAAGGCCGTTATGCACAACGCGTCGGCTCAGGCTCCCCGGTCTACCTTTCCGCCGTCCTCGAATATCTTGCTGCTGAGGTTTTGGAGTTAGCGGGCAATGCTGCGAGGGACAACAAGAAGAACAGAATCATTCCAAGGCATATTCAGCTTGCGGTGAGGAACGATGAGGAATTGAGCAAGCTTTTGGGATCGGTTACGATTGCAAGCGGAGGAGTAATGCCGAAGATCCACCAGTCTCTTTTACCGAAGAAGGCCGGGAATGCGAAAGACAACCGAACGAGAATTACGAGATGTGACATCGTTGAAATTCGAAATCTTCAAATTACACATTCTCTAGGGTTTCGATCATCCGCCGGAAAAGATCGTAGAATGAGTTCATCGGCTTCTACCAAGGGCGGCAGAGGGAAACCCAAAGCCACGAAGTCTGTTTCTCGGTCTCAGAAGGCTGGTCTTCAGTTCCCCGTCGGCCGTATTGCGCGATTTCTTAAAGCCGGTAAGTATGCGGAGCGTGTCGGTGCTGGTGCTCCCGTCTACCTCTCCGCCGTCCTCGAATATCTGGCCGCCGAGGTGCTTGAGCTTGCAGGCAATGCTGCCAGAGACAACAAGAAGAATCGCATTGTTCCAAGACACATACAGCTTGCTGTCCGCAACGACGAAGAGCTAAGCAAGCTTTTGGGTGATGTGACCATTGCAAATGGTGGTGTGTTACCAAATATCCATCAAAATCTCTTGCCTAAGAAGGCAGGATCAGGCAAAGGTGACATTGGATCTGCATCACAAGAGTTCTAA

Protein sequence

MSSTDIPAKGGRGRKATTKSVSRSHKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAVLEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQSLLPKKAGNAKDNRTRITRCDIVEIRNLQITHSLGFRSSAGKDRRMSSSASTKGGRGKPKATKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGDVTIANGGVLPNIHQNLLPKKAGSGKGDIGSASQEF

Homology

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BLAST of CaUC09G164290 vs. NCBI nr
Match: GAY40811.1 (hypothetical protein CUMW_054740 [Citrus unshiu])

HSP 1 Score: 443.7 bits (1140), Expect = 1.2e-120
Identity = 241/303 (79.54%), Postives = 257/303 (84.82%), Query Frame = 0


Query: 1   MSSTDIPAKGGRGRKATTKSVSRSHKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAV 60
           MSS     KGGRGR   TK VSRSHKAGLQFPVGR+AR+LKKGRYAQRVGSGSPVYLSAV
Sbjct: 1   MSSEAAATKGGRGRSKDTKPVSRSHKAGLQFPVGRVARFLKKGRYAQRVGSGSPVYLSAV 60

Query: 61  LEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQS 120
           LEYLAAEVLELAGNAARDNKKNRIIPRHIQLAV+NDEE SKLLGSVTIA+GGV+P IHQ+
Sbjct: 61  LEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVKNDEEFSKLLGSVTIANGGVLPNIHQN 120

Query: 121 LLPKKAGNAKDNRTRITRCDIVEIRNLQITHSLGFRSSAGKDRRMSSSASTKGGRGKPKA 180
           LLPKKA   K         +I  +       S   R+ A   + MSS+ STKGGRGKPK+
Sbjct: 121 LLPKKAAARKG--------EIGSVSQEASPESASKRAFALFCQSMSSAGSTKGGRGKPKS 180

Query: 181 TKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAAR 240
           TKS+SRS KAGLQFPVGRIARFLKAGKYA+RVGAGAPVYLSAVLEYLAAEVLELAGNAAR
Sbjct: 181 TKSISRSHKAGLQFPVGRIARFLKAGKYADRVGAGAPVYLSAVLEYLAAEVLELAGNAAR 240

Query: 241 DNKKNRIVPRHIQLAVRNDEELSKLLGDVTIANGGVLPNIHQNLLPKKAGSGKGDIGSAS 300
           DNKKNRIVPRHIQLAVRNDEELSKLLG VTIANGGVLPNIHQNLLP+K G G+ DIGSAS
Sbjct: 241 DNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLPRKMGKGREDIGSAS 295

Query: 301 QEF 304
           QEF
Sbjct: 301 QEF 295

[Close]

BLAST of CaUC09G164290 vs. NCBI nr
Match: KDP21535.1 (hypothetical protein JCGZ_22006 [Jatropha curcas])

HSP 1 Score: 439.1 bits (1128), Expect = 3.1e-119
Identity = 244/309 (78.96%), Postives = 257/309 (83.17%), Query Frame = 0


Query: 1   MSSTDIP------AKGGRGRKATTKSVSRSHKAGLQFPVGRIARYLKKGRYAQRVGSGSP 60
           MSST +P      A+GGRG  +  KSVSRSHKAGLQFPVGR+AR+LK+GRYAQRVGSGSP
Sbjct: 1   MSSTTVPSATAKTARGGRG-ISKAKSVSRSHKAGLQFPVGRVARFLKRGRYAQRVGSGSP 60

Query: 61  VYLSAVLEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGGVM 120
           VYLSAVLEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIA+GGV+
Sbjct: 61  VYLSAVLEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIANGGVL 120

Query: 121 PKIHQSLLPKKAGNAKDNRTRITRCDIVEIRNLQITHSLGFRSSAGKDRRMSSSASTKGG 180
           P IHQ+LLPKK    K                      LG      +   MSS  STKGG
Sbjct: 121 PNIHQNLLPKKTAKGK---------------------GLGI----NRKPAMSSGGSTKGG 180

Query: 181 RGKPKATKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLEL 240
           RGKPK++KSVSRSQKAGLQFPVGRIARFLKAGKYA+RVGAGAPVYLSAVLEYLAAEVLEL
Sbjct: 181 RGKPKSSKSVSRSQKAGLQFPVGRIARFLKAGKYADRVGAGAPVYLSAVLEYLAAEVLEL 240

Query: 241 AGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGDVTIANGGVLPNIHQNLLPKKAGSGKG 300
           AGNAARDNKKNRIVPRHIQLAVRNDEELSKLLG VTIANGGVLPNIHQNLLPKK G GKG
Sbjct: 241 AGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLPKKMGKGKG 283

Query: 301 DIGSASQEF 304
           DIGSASQEF
Sbjct: 301 DIGSASQEF 283

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BLAST of CaUC09G164290 vs. NCBI nr
Match: KAF4357682.1 (hypothetical protein F8388_007218 [Cannabis sativa])

HSP 1 Score: 438.3 bits (1126), Expect = 5.2e-119
Identity = 243/318 (76.42%), Postives = 261/318 (82.08%), Query Frame = 0


Query: 9   KGGRGRKATTKSVSRSHKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAVLEYLAAEV 68
           KGGRG+    KSVSRS KAGLQFPVGRIAR+LKKGRYAQRVGSGSPVYLSAVLEYLAAE+
Sbjct: 90  KGGRGKPKANKSVSRSSKAGLQFPVGRIARFLKKGRYAQRVGSGSPVYLSAVLEYLAAEL 149

Query: 69  LELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQSLLPKKAGN 128
           LELAGNAARDNKK+RIIPRHIQLAVRNDEELSKLLG+VTIA+GGV+P IHQ+LLPKK G 
Sbjct: 150 LELAGNAARDNKKSRIIPRHIQLAVRNDEELSKLLGAVTIANGGVLPNIHQTLLPKKVGK 209

Query: 129 AKDNRTRITRCDIVEIRNLQITHSLGF---------RSSA--------------GKDRRM 188
            KD     ++ D+VE   L   HSL           RSS                K  +M
Sbjct: 210 GKDEIGSASQ-DLVEEVGLLCKHSLSLQYVSFSLSCRSSCSITFPRVYLYFDPDSKTLKM 269

Query: 189 SSSASTKGGRGKPKATKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLE 248
           S++A+TKGGRGKPK++KSVSRS KAGLQFPVGRIARFLK GKYAERVGAGAPVYLSAVLE
Sbjct: 270 STAATTKGGRGKPKSSKSVSRSSKAGLQFPVGRIARFLKNGKYAERVGAGAPVYLSAVLE 329

Query: 249 YLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGDVTIANGGVLPNIHQNLL 304
           YLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLG VTIANGGVLPNIHQ LL
Sbjct: 330 YLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQTLL 389

[Close]

BLAST of CaUC09G164290 vs. NCBI nr
Match: KAF4368296.1 (hypothetical protein G4B88_008600 [Cannabis sativa])

HSP 1 Score: 435.3 bits (1118), Expect = 4.4e-118
Identity = 237/295 (80.34%), Postives = 254/295 (86.10%), Query Frame = 0


Query: 9   KGGRGRKATTKSVSRSHKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAVLEYLAAEV 68
           KGGRG+    KSVSRS KAGLQFPVGRIAR+LKKGRYAQRVGSGSPVYLSAVLEYLAAE+
Sbjct: 546 KGGRGKPKANKSVSRSSKAGLQFPVGRIARFLKKGRYAQRVGSGSPVYLSAVLEYLAAEL 605

Query: 69  LELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQSLLPKKAGN 128
           LELAGNAARDNKK+RIIPRHIQLAVRNDEELSKLLG+VTIA+GGV+P IHQ+LLPKK G 
Sbjct: 606 LELAGNAARDNKKSRIIPRHIQLAVRNDEELSKLLGAVTIANGGVLPNIHQTLLPKKVGK 665

Query: 129 AKDNRTRITRCDIVEIRNLQITHSLGFRSSAGKDRRMSSSASTKGGRGKPKATKSVSRSQ 188
            KD           EI +      L F   + K  +MS++A+TKGGRGKPK++KSVSRS 
Sbjct: 666 GKD-----------EIGSASQEVYLYFDPDS-KTLKMSTAATTKGGRGKPKSSKSVSRSS 725

Query: 189 KAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIV 248
           KAGLQFPVGRIARFLK GKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIV
Sbjct: 726 KAGLQFPVGRIARFLKNGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIV 785

Query: 249 PRHIQLAVRNDEELSKLLGDVTIANGGVLPNIHQNLLPKKAGSGKGDIGSASQEF 304
           PRHIQLAVRNDEELSKLLG VTIANGGVLPNIHQ LLPKK G GKG+ GSASQEF
Sbjct: 786 PRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQTLLPKKVGKGKGEFGSASQEF 828

[Close]

BLAST of CaUC09G164290 vs. NCBI nr
Match: KAG6751671.1 (hypothetical protein POTOM_043868 [Populus tomentosa])

HSP 1 Score: 433.3 bits (1113), Expect = 1.7e-117
Identity = 235/299 (78.60%), Postives = 255/299 (85.28%), Query Frame = 0


Query: 9   KGGRGRKATTKSVSRSHKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAVLEYLAAEV 68
           +GGRG+   +K+VSRS KAGLQFPVGRIAR+LK G+YA+R+G+GSPVYLSAVLEYLAAEV
Sbjct: 33  RGGRGKPKASKAVSRSQKAGLQFPVGRIARFLKTGKYAERLGAGSPVYLSAVLEYLAAEV 92

Query: 69  LELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQSLLPKKAGN 128
           LELAGNAARDNKKNRIIPRHIQLAVRNDEEL KLLGSVTIA+GGV+P I+Q+LLPKKAG 
Sbjct: 93  LELAGNAARDNKKNRIIPRHIQLAVRNDEELGKLLGSVTIANGGVLPNINQTLLPKKAGK 152

Query: 129 AKDNRTRITRCD-IVEIRNLQ---ITHSLGFRSSAGKDRRMSSSASTKGGRGKPKATKSV 188
            K         +    +R LQ   +  S  F+ S+         ASTKGGRGKPKA+KSV
Sbjct: 153 GKGGDVGFASHETTTRVRVLQRCILVKSFDFKMSS-----KEGGASTKGGRGKPKASKSV 212

Query: 189 SRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKK 248
           SRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYL+AVLEYLAAEVLELAGNAARDNKK
Sbjct: 213 SRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKK 272

Query: 249 NRIVPRHIQLAVRNDEELSKLLGDVTIANGGVLPNIHQNLLPKKAGSGKGDIGSASQEF 304
           NRIVPRHIQLAVRNDEELSKLLG VTIANGGVLPNIHQ LLPKK G GKGDIGSASQEF
Sbjct: 273 NRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGKGKGDIGSASQEF 326

[Close]

BLAST of CaUC09G164290 vs. ExPASy Swiss-Prot
Match: O65759 (Histone H2AX OS=Cicer arietinum OX=3827 GN=HIS2A PE=2 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 2.9e-64
Identity = 129/139 (92.81%), Postives = 133/139 (95.68%), Query Frame = 0


Query: 165 MSSSASTKGGRGKPKATKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVL 224
           MSS+A+TKGGRGKPKA+KSVSRS KAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVL
Sbjct: 1   MSSTATTKGGRGKPKASKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVL 60

Query: 225 EYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGDVTIANGGVLPNIHQNL 284
           EYLAAEVLELAGNAARDNK NRIVPRHIQLAVRNDEELSKLLG VTIANGGVLPNIHQ L
Sbjct: 61  EYLAAEVLELAGNAARDNKNNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTL 120

Query: 285 LPKKAGSGKGDIGSASQEF 304
           LPKK G GKG+IGSASQEF
Sbjct: 121 LPKKVGKGKGEIGSASQEF 139

[Close]

BLAST of CaUC09G164290 vs. ExPASy Swiss-Prot
Match: Q9S9K7 (Probable histone H2AXb OS=Arabidopsis thaliana OX=3702 GN=At1g54690 PE=1 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 3.6e-62
Identity = 126/138 (91.30%), Postives = 128/138 (92.75%), Query Frame = 0


Query: 166 SSSASTKGGRGKPKATKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLE 225
           + S +TKGGRGKPKATKSVSRS KAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLE
Sbjct: 5   AGSGTTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLE 64

Query: 226 YLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGDVTIANGGVLPNIHQNLL 285
           YLAAEVLELAGNAARDNKK RIVPRHIQLAVRNDEELSKLLG VTIANGGVLPNIHQ LL
Sbjct: 65  YLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLL 124

Query: 286 PKKAGSGKGDIGSASQEF 304
           P K G  KGDIGSASQEF
Sbjct: 125 PSKVGKNKGDIGSASQEF 142

[Close]

BLAST of CaUC09G164290 vs. ExPASy Swiss-Prot
Match: O04848 (Probable histone H2AXa OS=Arabidopsis thaliana OX=3702 GN=At1g08880 PE=1 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 8.0e-62
Identity = 125/138 (90.58%), Postives = 128/138 (92.75%), Query Frame = 0


Query: 166 SSSASTKGGRGKPKATKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLE 225
           + S +TKGGRGKPKATKSVSRS KAGLQFPVGRIARFLK+GKYAERVGAGAPVYLSAVLE
Sbjct: 5   AGSGTTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAPVYLSAVLE 64

Query: 226 YLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGDVTIANGGVLPNIHQNLL 285
           YLAAEVLELAGNAARDNKK RIVPRHIQLAVRNDEELSKLLG VTIANGGVLPNIHQ LL
Sbjct: 65  YLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLL 124

Query: 286 PKKAGSGKGDIGSASQEF 304
           P K G  KGDIGSASQEF
Sbjct: 125 PSKVGKNKGDIGSASQEF 142

[Close]

BLAST of CaUC09G164290 vs. ExPASy Swiss-Prot
Match: P35063 (Histone H2AX OS=Picea abies OX=3329 PE=2 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 3.0e-61
Identity = 125/137 (91.24%), Postives = 130/137 (94.89%), Query Frame = 0


Query: 167 SSASTKGGRGKPKATKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEY 226
           SS+  KGGRGK K+TKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYL+AVLEY
Sbjct: 2   SSSGAKGGRGKAKSTKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEY 61

Query: 227 LAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGDVTIANGGVLPNIHQNLLP 286
           LAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLG VTIANGGVLPNIHQ LLP
Sbjct: 62  LAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGAVTIANGGVLPNIHQVLLP 121

Query: 287 KKAGSGKGDIGSASQEF 304
           KK+G  KG+IGSASQEF
Sbjct: 122 KKSGKDKGEIGSASQEF 138

[Close]

BLAST of CaUC09G164290 vs. ExPASy Swiss-Prot
Match: A2ZL69 (Probable histone H2AXb OS=Oryza sativa subsp. indica OX=39946 GN=OsI_037312 PE=3 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 4.1e-58
Identity = 121/137 (88.32%), Postives = 124/137 (90.51%), Query Frame = 0


Query: 167 SSASTKGGRGKPKATKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEY 226
           SSA   GGRGK K +KSVSRS KAGLQFPVGRIAR+LKAGKYAERVGAGAPVYLSAVLEY
Sbjct: 2   SSAGGGGGRGKSKGSKSVSRSSKAGLQFPVGRIARYLKAGKYAERVGAGAPVYLSAVLEY 61

Query: 227 LAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGDVTIANGGVLPNIHQNLLP 286
           LAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELS+LLG VTIA GGVLPNIHQ LLP
Sbjct: 62  LAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSRLLGAVTIAAGGVLPNIHQTLLP 121

Query: 287 KKAGSGKGDIGSASQEF 304
           KK G  K DIGSASQEF
Sbjct: 122 KKGGKDKADIGSASQEF 138

[Close]

BLAST of CaUC09G164290 vs. ExPASy TrEMBL
Match: A0A2H5NLL6 (Histone H2A OS=Citrus unshiu OX=55188 GN=CUMW_054740 PE=3 SV=1)

HSP 1 Score: 443.7 bits (1140), Expect = 6.0e-121
Identity = 241/303 (79.54%), Postives = 257/303 (84.82%), Query Frame = 0


Query: 1   MSSTDIPAKGGRGRKATTKSVSRSHKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAV 60
           MSS     KGGRGR   TK VSRSHKAGLQFPVGR+AR+LKKGRYAQRVGSGSPVYLSAV
Sbjct: 1   MSSEAAATKGGRGRSKDTKPVSRSHKAGLQFPVGRVARFLKKGRYAQRVGSGSPVYLSAV 60

Query: 61  LEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQS 120
           LEYLAAEVLELAGNAARDNKKNRIIPRHIQLAV+NDEE SKLLGSVTIA+GGV+P IHQ+
Sbjct: 61  LEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVKNDEEFSKLLGSVTIANGGVLPNIHQN 120

Query: 121 LLPKKAGNAKDNRTRITRCDIVEIRNLQITHSLGFRSSAGKDRRMSSSASTKGGRGKPKA 180
           LLPKKA   K         +I  +       S   R+ A   + MSS+ STKGGRGKPK+
Sbjct: 121 LLPKKAAARKG--------EIGSVSQEASPESASKRAFALFCQSMSSAGSTKGGRGKPKS 180

Query: 181 TKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAAR 240
           TKS+SRS KAGLQFPVGRIARFLKAGKYA+RVGAGAPVYLSAVLEYLAAEVLELAGNAAR
Sbjct: 181 TKSISRSHKAGLQFPVGRIARFLKAGKYADRVGAGAPVYLSAVLEYLAAEVLELAGNAAR 240

Query: 241 DNKKNRIVPRHIQLAVRNDEELSKLLGDVTIANGGVLPNIHQNLLPKKAGSGKGDIGSAS 300
           DNKKNRIVPRHIQLAVRNDEELSKLLG VTIANGGVLPNIHQNLLP+K G G+ DIGSAS
Sbjct: 241 DNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLPRKMGKGREDIGSAS 295

Query: 301 QEF 304
           QEF
Sbjct: 301 QEF 295

[Close]

BLAST of CaUC09G164290 vs. ExPASy TrEMBL
Match: A0A067JNE6 (Histone H2A OS=Jatropha curcas OX=180498 GN=JCGZ_22006 PE=3 SV=1)

HSP 1 Score: 439.1 bits (1128), Expect = 1.5e-119
Identity = 244/309 (78.96%), Postives = 257/309 (83.17%), Query Frame = 0


Query: 1   MSSTDIP------AKGGRGRKATTKSVSRSHKAGLQFPVGRIARYLKKGRYAQRVGSGSP 60
           MSST +P      A+GGRG  +  KSVSRSHKAGLQFPVGR+AR+LK+GRYAQRVGSGSP
Sbjct: 1   MSSTTVPSATAKTARGGRG-ISKAKSVSRSHKAGLQFPVGRVARFLKRGRYAQRVGSGSP 60

Query: 61  VYLSAVLEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGGVM 120
           VYLSAVLEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIA+GGV+
Sbjct: 61  VYLSAVLEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIANGGVL 120

Query: 121 PKIHQSLLPKKAGNAKDNRTRITRCDIVEIRNLQITHSLGFRSSAGKDRRMSSSASTKGG 180
           P IHQ+LLPKK    K                      LG      +   MSS  STKGG
Sbjct: 121 PNIHQNLLPKKTAKGK---------------------GLGI----NRKPAMSSGGSTKGG 180

Query: 181 RGKPKATKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLEL 240
           RGKPK++KSVSRSQKAGLQFPVGRIARFLKAGKYA+RVGAGAPVYLSAVLEYLAAEVLEL
Sbjct: 181 RGKPKSSKSVSRSQKAGLQFPVGRIARFLKAGKYADRVGAGAPVYLSAVLEYLAAEVLEL 240

Query: 241 AGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGDVTIANGGVLPNIHQNLLPKKAGSGKG 300
           AGNAARDNKKNRIVPRHIQLAVRNDEELSKLLG VTIANGGVLPNIHQNLLPKK G GKG
Sbjct: 241 AGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLPKKMGKGKG 283

Query: 301 DIGSASQEF 304
           DIGSASQEF
Sbjct: 301 DIGSASQEF 283

[Close]

BLAST of CaUC09G164290 vs. ExPASy TrEMBL
Match: A0A7J6EH34 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_007218 PE=3 SV=1)

HSP 1 Score: 438.3 bits (1126), Expect = 2.5e-119
Identity = 243/318 (76.42%), Postives = 261/318 (82.08%), Query Frame = 0


Query: 9   KGGRGRKATTKSVSRSHKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAVLEYLAAEV 68
           KGGRG+    KSVSRS KAGLQFPVGRIAR+LKKGRYAQRVGSGSPVYLSAVLEYLAAE+
Sbjct: 90  KGGRGKPKANKSVSRSSKAGLQFPVGRIARFLKKGRYAQRVGSGSPVYLSAVLEYLAAEL 149

Query: 69  LELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQSLLPKKAGN 128
           LELAGNAARDNKK+RIIPRHIQLAVRNDEELSKLLG+VTIA+GGV+P IHQ+LLPKK G 
Sbjct: 150 LELAGNAARDNKKSRIIPRHIQLAVRNDEELSKLLGAVTIANGGVLPNIHQTLLPKKVGK 209

Query: 129 AKDNRTRITRCDIVEIRNLQITHSLGF---------RSSA--------------GKDRRM 188
            KD     ++ D+VE   L   HSL           RSS                K  +M
Sbjct: 210 GKDEIGSASQ-DLVEEVGLLCKHSLSLQYVSFSLSCRSSCSITFPRVYLYFDPDSKTLKM 269

Query: 189 SSSASTKGGRGKPKATKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLE 248
           S++A+TKGGRGKPK++KSVSRS KAGLQFPVGRIARFLK GKYAERVGAGAPVYLSAVLE
Sbjct: 270 STAATTKGGRGKPKSSKSVSRSSKAGLQFPVGRIARFLKNGKYAERVGAGAPVYLSAVLE 329

Query: 249 YLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGDVTIANGGVLPNIHQNLL 304
           YLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLG VTIANGGVLPNIHQ LL
Sbjct: 330 YLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQTLL 389

[Close]

BLAST of CaUC09G164290 vs. ExPASy TrEMBL
Match: A0A7J6FC78 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_008600 PE=3 SV=1)

HSP 1 Score: 435.3 bits (1118), Expect = 2.1e-118
Identity = 237/295 (80.34%), Postives = 254/295 (86.10%), Query Frame = 0


Query: 9   KGGRGRKATTKSVSRSHKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAVLEYLAAEV 68
           KGGRG+    KSVSRS KAGLQFPVGRIAR+LKKGRYAQRVGSGSPVYLSAVLEYLAAE+
Sbjct: 546 KGGRGKPKANKSVSRSSKAGLQFPVGRIARFLKKGRYAQRVGSGSPVYLSAVLEYLAAEL 605

Query: 69  LELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQSLLPKKAGN 128
           LELAGNAARDNKK+RIIPRHIQLAVRNDEELSKLLG+VTIA+GGV+P IHQ+LLPKK G 
Sbjct: 606 LELAGNAARDNKKSRIIPRHIQLAVRNDEELSKLLGAVTIANGGVLPNIHQTLLPKKVGK 665

Query: 129 AKDNRTRITRCDIVEIRNLQITHSLGFRSSAGKDRRMSSSASTKGGRGKPKATKSVSRSQ 188
            KD           EI +      L F   + K  +MS++A+TKGGRGKPK++KSVSRS 
Sbjct: 666 GKD-----------EIGSASQEVYLYFDPDS-KTLKMSTAATTKGGRGKPKSSKSVSRSS 725

Query: 189 KAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIV 248
           KAGLQFPVGRIARFLK GKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIV
Sbjct: 726 KAGLQFPVGRIARFLKNGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIV 785

Query: 249 PRHIQLAVRNDEELSKLLGDVTIANGGVLPNIHQNLLPKKAGSGKGDIGSASQEF 304
           PRHIQLAVRNDEELSKLLG VTIANGGVLPNIHQ LLPKK G GKG+ GSASQEF
Sbjct: 786 PRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQTLLPKKVGKGKGEFGSASQEF 828

[Close]

BLAST of CaUC09G164290 vs. ExPASy TrEMBL
Match: A0A1E5WIF6 (Histone H2A OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0001824 PE=3 SV=1)

HSP 1 Score: 362.1 bits (928), Expect = 2.3e-96
Identity = 199/290 (68.62%), Postives = 223/290 (76.90%), Query Frame = 0


Query: 13  GRKATTKSVSRSHKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAVLEYLAAEVLELA 72
           G  A  K+ SRS KAGLQFPVGRIAR+LK G+YA+RVG+G+PVYL+AVLEYLAAEVLELA
Sbjct: 9   GAGAAKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELA 68

Query: 73  GNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQSLLPKKAGNAKDN 132
           GNAARDNKK RI+PRHIQLAVRNDEEL+KLLG  TIASGGVMP IHQ LLPKKA ++K  
Sbjct: 69  GNAARDNKKTRIVPRHIQLAVRNDEELTKLLGGATIASGGVMPNIHQHLLPKKAASSKT- 128

Query: 133 RTRITRCDIVEIRNLQITHSLGFRSSAGKDRRMSSSASTKGGRGKPKATKSVSRSQKAGL 192
                              S    + AG+ + + S A          A K++SRS KAGL
Sbjct: 129 -------------------SSQLPAMAGRGKAIGSGA----------AKKAMSRSSKAGL 188

Query: 193 QFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPRHI 252
           QFPVGRIARFLKAGKYAERVGAGAPVYL+AVLEYLAAEVLELAGNAARDNKK RIVPRHI
Sbjct: 189 QFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHI 248

Query: 253 QLAVRNDEELSKLLGDVTIANGGVLPNIHQNLLPKKAGSGKGDIGSASQE 303
           QLAVRNDEELS+LLG VTIA+GGV+PNIH  LLPKKAG G     +  ++
Sbjct: 249 QLAVRNDEELSRLLGTVTIASGGVMPNIHNLLLPKKAGGGSAKAAAGDED 268

[Close]

BLAST of CaUC09G164290 vs. TAIR 10
Match: AT1G54690.1 (gamma histone variant H2AX )

HSP 1 Score: 240.0 bits (611), Expect = 2.5e-63
Identity = 126/138 (91.30%), Postives = 128/138 (92.75%), Query Frame = 0


Query: 166 SSSASTKGGRGKPKATKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLE 225
           + S +TKGGRGKPKATKSVSRS KAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLE
Sbjct: 5   AGSGTTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLE 64

Query: 226 YLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGDVTIANGGVLPNIHQNLL 285
           YLAAEVLELAGNAARDNKK RIVPRHIQLAVRNDEELSKLLG VTIANGGVLPNIHQ LL
Sbjct: 65  YLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLL 124

Query: 286 PKKAGSGKGDIGSASQEF 304
           P K G  KGDIGSASQEF
Sbjct: 125 PSKVGKNKGDIGSASQEF 142

[Close]

BLAST of CaUC09G164290 vs. TAIR 10
Match: AT1G08880.1 (Histone superfamily protein )

HSP 1 Score: 238.8 bits (608), Expect = 5.7e-63
Identity = 125/138 (90.58%), Postives = 128/138 (92.75%), Query Frame = 0


Query: 166 SSSASTKGGRGKPKATKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLE 225
           + S +TKGGRGKPKATKSVSRS KAGLQFPVGRIARFLK+GKYAERVGAGAPVYLSAVLE
Sbjct: 5   AGSGTTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAPVYLSAVLE 64

Query: 226 YLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGDVTIANGGVLPNIHQNLL 285
           YLAAEVLELAGNAARDNKK RIVPRHIQLAVRNDEELSKLLG VTIANGGVLPNIHQ LL
Sbjct: 65  YLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLL 124

Query: 286 PKKAGSGKGDIGSASQEF 304
           P K G  KGDIGSASQEF
Sbjct: 125 PSKVGKNKGDIGSASQEF 142

[Close]

BLAST of CaUC09G164290 vs. TAIR 10
Match: AT4G27230.1 (histone H2A 2 )

HSP 1 Score: 202.2 bits (513), Expect = 5.9e-52
Identity = 109/124 (87.90%), Postives = 111/124 (89.52%), Query Frame = 0


Query: 174 GRGKP----KATKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAA 233
           GRGK      A KS SRS KAGLQFPVGRIARFLKAGKYAERVGAGAPVYL+AVLEYLAA
Sbjct: 3   GRGKQLGSGAAKKSTSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAA 62

Query: 234 EVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGDVTIANGGVLPNIHQNLLPKKA 293
           EVLELAGNAARDNKK RIVPRHIQLAVRNDEELSKLLGDVTIANGGV+PNIH  LLPKKA
Sbjct: 63  EVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKA 122

[Close]

BLAST of CaUC09G164290 vs. TAIR 10
Match: AT4G27230.2 (histone H2A 2 )

HSP 1 Score: 202.2 bits (513), Expect = 5.9e-52
Identity = 109/124 (87.90%), Postives = 111/124 (89.52%), Query Frame = 0


Query: 174 GRGKP----KATKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAA 233
           GRGK      A KS SRS KAGLQFPVGRIARFLKAGKYAERVGAGAPVYL+AVLEYLAA
Sbjct: 3   GRGKQLGSGAAKKSTSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAA 62

Query: 234 EVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGDVTIANGGVLPNIHQNLLPKKA 293
           EVLELAGNAARDNKK RIVPRHIQLAVRNDEELSKLLGDVTIANGGV+PNIH  LLPKKA
Sbjct: 63  EVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKA 122

[Close]

BLAST of CaUC09G164290 vs. TAIR 10
Match: AT5G54640.1 (Histone superfamily protein )

HSP 1 Score: 198.7 bits (504), Expect = 6.5e-51
Identity = 108/129 (83.72%), Postives = 112/129 (86.82%), Query Frame = 0


Query: 165 MSSSASTKGGRGKPKATKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVL 224
           M+    T G  G  KAT   SRS KAGLQFPVGRIARFLKAGKYAERVGAGAPVYL+AVL
Sbjct: 1   MAGRGKTLGSGGAKKAT---SRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVL 60

Query: 225 EYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGDVTIANGGVLPNIHQNL 284
           EYLAAEVLELAGNAARDNKK RIVPRHIQLAVRNDEELSKLLGDVTIANGGV+PNIH  L
Sbjct: 61  EYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLL 120

Query: 285 LPKKAGSGK 294
           LPKKAG+ K
Sbjct: 121 LPKKAGASK 126

The following BLAST results are available for this feature:

BLAST of CaUC09G164290 vs. NCBI nr


Match Name	E-value	Identity	Description
GAY40811.1	1.2e-120	79.54	hypothetical protein CUMW_054740 [Citrus unshiu]	[more]
KDP21535.1	3.1e-119	78.96	hypothetical protein JCGZ_22006 [Jatropha curcas]	[more]
KAF4357682.1	5.2e-119	76.42	hypothetical protein F8388_007218 [Cannabis sativa]	[more]
KAF4368296.1	4.4e-118	80.34	hypothetical protein G4B88_008600 [Cannabis sativa]	[more]
KAG6751671.1	1.7e-117	78.60	hypothetical protein POTOM_043868 [Populus tomentosa]	[more]

BLAST of CaUC09G164290 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65759	2.9e-64	92.81	Histone H2AX OS=Cicer arietinum OX=3827 GN=HIS2A PE=2 SV=1	[more]
Q9S9K7	3.6e-62	91.30	Probable histone H2AXb OS=Arabidopsis thaliana OX=3702 GN=At1g54690 PE=1 SV=1	[more]
O04848	8.0e-62	90.58	Probable histone H2AXa OS=Arabidopsis thaliana OX=3702 GN=At1g08880 PE=1 SV=1	[more]
P35063	3.0e-61	91.24	Histone H2AX OS=Picea abies OX=3329 PE=2 SV=1	[more]
A2ZL69	4.1e-58	88.32	Probable histone H2AXb OS=Oryza sativa subsp. indica OX=39946 GN=OsI_037312 PE=3...	[more]

BLAST of CaUC09G164290 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2H5NLL6	6.0e-121	79.54	Histone H2A OS=Citrus unshiu OX=55188 GN=CUMW_054740 PE=3 SV=1	[more]
A0A067JNE6	1.5e-119	78.96	Histone H2A OS=Jatropha curcas OX=180498 GN=JCGZ_22006 PE=3 SV=1	[more]
A0A7J6EH34	2.5e-119	76.42	Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_007218 PE=3 SV=1	[more]
A0A7J6FC78	2.1e-118	80.34	Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_008600 PE=3 SV=1	[more]
A0A1E5WIF6	2.3e-96	68.62	Histone H2A OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0001824 PE=3 SV=1	[more]

BLAST of CaUC09G164290 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G54690.1	2.5e-63	91.30	gamma histone variant H2AX	[more]
AT1G08880.1	5.7e-63	90.58	Histone superfamily protein	[more]
AT4G27230.1	5.9e-52	87.90	histone H2A 2	[more]
AT4G27230.2	5.9e-52	87.90	histone H2A 2	[more]
AT5G54640.1	6.5e-51	83.72	Histone superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002119	Histone H2A	PRINTS	PR00620	HISTONEH2A	coord: 182..204 score: 69.94 coord: 211..226 score: 84.58 coord: 240..254 score: 75.49 coord: 268..286 score: 70.48 coord: 226..239 score: 89.46
IPR002119	Histone H2A	SMART	SM00414	h2a4	coord: 8..128 e-value: 1.9E-76 score: 269.9 coord: 171..291 e-value: 8.0E-78 score: 274.5
IPR002119	Histone H2A	CDD	cd00074	H2A	coord: 13..125 e-value: 1.97354E-66 score: 201.795
IPR002119	Histone H2A	CDD	cd00074	H2A	coord: 176..288 e-value: 4.33642E-65 score: 198.328
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 168..295 e-value: 1.1E-62 score: 211.5 coord: 7..134 e-value: 1.4E-62 score: 211.2
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 185..288
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 22..125
IPR007125	Histone H2A/H2B/H3	PFAM	PF00125	Histone	coord: 7..94 e-value: 7.9E-15 score: 55.4 coord: 170..257 e-value: 2.0E-14 score: 54.1
IPR032454	Histone H2A, C-terminal domain	PFAM	PF16211	Histone_H2A_C	coord: 260..293 e-value: 3.1E-18 score: 65.2 coord: 97..130 e-value: 2.5E-17 score: 62.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 157..174
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 157..189
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	PANTHER	PTHR23430:SF288	HISTONE H2A	coord: 7..132
None	No IPR available	PANTHER	PTHR23430:SF288	HISTONE H2A	coord: 167..301
None	No IPR available	PANTHER	PTHR23430	HISTONE H2A	coord: 167..301
None	No IPR available	PANTHER	PTHR23430	HISTONE H2A	coord: 7..132
IPR032458	Histone H2A conserved site	PROSITE	PS00046	HISTONE_H2A	coord: 27..33
IPR032458	Histone H2A conserved site	PROSITE	PS00046	HISTONE_H2A	coord: 190..196

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC09G164290.1	CaUC09G164290.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0000786	nucleosome
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046982	protein heterodimerization activity