CaUC09G163570 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC09G163570
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	outer envelope pore protein 16-4, chloroplastic
Location	Ciama_Chr09: 5268042 .. 5270934 (+)
RNA-Seq Expression	CaUC09G163570
Synteny	CaUC09G163570

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AACAAAAATCAAAACGACGTAGTATTGCTGGAACTTGGAAGATAGCTTTCTGCGTATGAGTTCCAAAGGAAATTGAAAATTGAAAGATGGAAGACGAACTCAACGGCGTCGTTCCATGTTCATCCCTCGCCGTCGAATCCACCATTCGCGTCGGAACGGTAAACTTCACGAACAATTTCTCAAGCTATAATTCCTTTGCTATAATTTCTCCCTCTAAATCGTTTTTTCCTGTTCATCTTCAGGCCGGCGCTCTATGGGGTTTGTGTATGGGTCCGTACAACTCTCGTAAAAATGGTAATCTGAAGCTTCAGATTTCAAATACATATTTTATCCTTTGATTCTTTTATTGCAATTTATCTTCTAGCTTTAATTCGCTTTCTCTCTTACAGGCCTCAGTGGCGTCGGCCATGCTGCTTTCGTGGTACCGTATACTTGCTATTTTTTGATTGAGATTGTAGCATTTTGGCGTTTGTTCGATCTGAAATTGCGTCTTTGTGATCTATTTTGCAGGCAAAGTCTGTTGGAAAATACGGCTTTCAGTGTGGTAGTGGTTGATTGTCTTAGTATTTTGCCTTTATAGATTGTTGAGCTGTGTTTGTGGCTGATTTTTTTGCCTGGTTTTGTTCTGGTCGAAGAAATAGCTAAAGATTTTGGGTTTTAGGACTTGTTGCTGGAACTTTTACTCTGACTCACTGTGGGATTCAAAGATATAGAAGGAAGAATGATTGGGTTAGTCACACTCATGAAATGATTCATTTTCACATTTATCATTTGTTTGAATGCATCCACTGTGAAGATTACCTAGCTGCATTCCCAGAACTTGACCTCCCTTGATTCATTGTGCATTAGATGAGTAGCCAAAAAATGCATCCCTCTTTCTGGATTGAATCCACCTCCGAAACCAATTAGCAATGGAAGGAGCAGCTCATATATTTTAAAAAGATTGTGAAGTCTCTTTATCTTTCGAGTGCGAGATTCTCAGCATGATAAGTGTATGACTTTGTATTATACCTGCACCCTAATTATGGTATGAGTTTCATTTTTCTAGTTGCTTTCAAAATATATTATTGGGGATGTCTCCATATTAACTAGATTTTGAGTGATGGTTGTCTAGCTTGAGCAGTTTTTACCACCTGAGTACCTTTTTGTGTGTAAAAAATGGGTGAGTAGAAATATAAAGGTATCCAAAAGTATTCACAACACTACCACGGGTATGGATGCTCTCGTTTTAAGAGATTTGTTTTTCTAAAATATAAATTAATTCCTTGAATCATAAAGGAACAATCTCCCATTTGTAGAATTTATCATGTTAAAGGTGTCTTAAAGTTTTCTTTATTGGTTTTATAGTTACATTGATAGGAATGCTATCAAGATGTTATTAGAGTATTAAGGATATATTAGAAATTTGTTAGGGGGTTTCTTATTCATGTTGGTTATAAAATAGAGGAGAGGAAAATGAAGAATATAGGCATATTGTGGTGAGTGAATTAGGGTTTGAGAGAGATCTCAAGAGGGGAGGGTCCAAGTGCTTAAAAAAAGAATCAATTGCTGCTTTATATGTTGAGACTTGCCTAAACATACTGGAACTATTTCTTTTTCTGAAAAGATATTCTGAGACTTGGAGTTTTATTCGGTGTGCTGAGGTTTGATCCCAGCTAGGTTTTATGTCTTGTTGTGGGGGGTTGCATCCTTAGATTTTCGAAATTATTCGTTAGGCCCGTACTTTTTTGGACTGGAGCCTTTTCTTGTAGGTTAGTTTCTGGTCGGCATCCCTCTTTTTGGCAGCTGTTTTTGTAGGCCCGTTTTCTGTTGGTTGTGCATTTGGTTGCCATTTTCTAGCCTTATTATATACTTTCATCTTCTTTCAATTAAAGTTCGATTTTCTTGAAAGTTTTGGTCCTTAGTTTTTGCATATCTTATATTCAGCCCCTCTTGCTTGGCTTACAACTATTGGGATATCAGATATGCATTGTCTTTTTGGGAATATAAGTTTACTAAACAGTACACAGGTGTCTTTTTGTTTCCATCTTGGATACATTTCATATTTCCTCCCTTGTTTGAATGATTACGATGCCAGAAATATGTATCATAGACCAAGTTAAGAGCAACTTTAGGAAAATATCTATACATCTCTTTTTTTCCATTTGGCAGTTGAATGGTTTGATCGCGGGTGCAGTCGCAGGAGCAGCGATTGCTACGAGGACCAGAAGTTGGTCGCAAGTAGTTGGGATGGCTGCCCTTGTCTCTGCCTTCAGTGCTGCTGCTGAATATTCAAAATCACTTTAGAATACCACTTCTAGGAACGAAACCGTGAGGTACTCGGCATTTAATCCATTTCCACTACTTCCACTTGTGAATGGCAAGCTACATGCTATTACAAAATATTCTTCTATATAATGATTATGAGAATTTTTACAAGTGTAATATCTCCTTCACCCAGGATAAACTCAGCAAGTGTCCTCTCATTATTCCACTAAATTGTTTGCTCTGTCCACAAAGGTTTGTTCGTACCTGTCGAAGGAGGGACCGCAATCTCGTCATGTCGATTTGATTCAATCTTCACGACTGCAGCTAACTTCTGGTGAGTTAAAGCCAGAAATGATGGAAAACTAACTCCTTATACCTTGATGTATAACAGCTCTCAGTGACTGCTATATCAGAAGATGAAACATCATAGGCGAAGTGGCCGATGTTCCCTTTCTTTCTTTAGTTTTACTTCCTACTGAAACTTCCATCATTCTGTCTCAATTAACTCCTCTTTCTGAGAATCAGTCCTAGAATTTCAGTAAGCTTTGAGTTTGATTGTGTTTTTTCTGAAGTAAATACGCAAGTTTTCATTGATTTGAATCATTTGATGAAAAATACCTATCAAGTTTTTCTTCCGAAGTACTCT

mRNA sequence

AACAAAAATCAAAACGACGTAGTATTGCTGGAACTTGGAAGATAGCTTTCTGCGTATGAGTTCCAAAGGAAATTGAAAATTGAAAGATGGAAGACGAACTCAACGGCGTCGTTCCATGTTCATCCCTCGCCGTCGAATCCACCATTCGCGTCGGAACGGCCGGCGCTCTATGGGGTTTGTGTATGGGTCCGTACAACTCTCGTAAAAATGGCCTCAGTGGCGTCGGCCATGCTGCTTTCGTGGTACCGTATACTTGCTATTTTTTGATTGAGATTGTAGCATTTTGGCGTTTGTTCGATCTGAAATTGCGTCTTTGTGATCTATTTTGCAGGCAAAGTCTGTTGGAAAATACGGCTTTCAGTGTGGTTTTATGTCTTGTTGTGGGGGGTTGCATCCTTAGATTTTCGAAATTATTCGTTAGGCCCGTACTTTTTTGGACTGGAGCCTTTTCTTGTAGGTTAGTTTCTGGTCGGCATCCCTCTTTTTGGCAGCTGTTTTTTTCGATTTTCTTGAAAGTTTTGTTGAATGGTTTGATCGCGGGTGCAGTCGCAGGAGCAGCGATTGCTACGAGGACCAGAAGTTGGTCGCAAGTAGTTGGGATGGCTGCCCTTGTCTCTGCCTTCAGTGCTGCTGCTGAATATTCAAAATCACTTTAGAATACCACTTCTAGGAACGAAACCGTGAGGATAAACTCAGCAAGTGTCCTCTCATTATTCCACTAAATTGTTTGCTCTGTCCACAAAGGTTTGTTCGTACCTGTCGAAGGAGGGACCGCAATCTCGTCATGTCGATTTGATTCAATCTTCACGACTGCAGCTAACTTCTGGTGAGTTAAAGCCAGAAATGATGGAAAACTAACTCCTTATACCTTGATGTATAACAGCTCTCAGTGACTGCTATATCAGAAGATGAAACATCATAGGCGAAGTGGCCGATGTTCCCTTTCTTTCTTTAGTTTTACTTCCTACTGAAACTTCCATCATTCTGTCTCAATTAACTCCTCTTTCTGAGAATCAGTCCTAGAATTTCAGTAAGCTTTGAGTTTGATTGTGTTTTTTCTGAAGTAAATACGCAAGTTTTCATTGATTTGAATCATTTGATGAAAAATACCTATCAAGTTTTTCTTCCGAAGTACTCT

Coding sequence (CDS)

ATGGAAGACGAACTCAACGGCGTCGTTCCATGTTCATCCCTCGCCGTCGAATCCACCATTCGCGTCGGAACGGCCGGCGCTCTATGGGGTTTGTGTATGGGTCCGTACAACTCTCGTAAAAATGGCCTCAGTGGCGTCGGCCATGCTGCTTTCGTGGTACCGTATACTTGCTATTTTTTGATTGAGATTGTAGCATTTTGGCGTTTGTTCGATCTGAAATTGCGTCTTTGTGATCTATTTTGCAGGCAAAGTCTGTTGGAAAATACGGCTTTCAGTGTGGTTTTATGTCTTGTTGTGGGGGGTTGCATCCTTAGATTTTCGAAATTATTCGTTAGGCCCGTACTTTTTTGGACTGGAGCCTTTTCTTGTAGGTTAGTTTCTGGTCGGCATCCCTCTTTTTGGCAGCTGTTTTTTTCGATTTTCTTGAAAGTTTTGTTGAATGGTTTGATCGCGGGTGCAGTCGCAGGAGCAGCGATTGCTACGAGGACCAGAAGTTGGTCGCAAGTAGTTGGGATGGCTGCCCTTGTCTCTGCCTTCAGTGCTGCTGCTGAATATTCAAAATCACTTTAG

Protein sequence

MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKNGLSGVGHAAFVVPYTCYFLIEIVAFWRLFDLKLRLCDLFCRQSLLENTAFSVVLCLVVGGCILRFSKLFVRPVLFWTGAFSCRLVSGRHPSFWQLFFSIFLKVLLNGLIAGAVAGAAIATRTRSWSQVVGMAALVSAFSAAAEYSKSL

Homology

[Close]

BLAST of CaUC09G163570 vs. NCBI nr
Match: XP_022143748.1 (outer envelope pore protein 16-4, chloroplastic isoform X2 [Momordica charantia])

HSP 1 Score: 151.0 bits (380), Expect = 1.0e-32
Identity = 99/189 (52.38%), Postives = 105/189 (55.56%), Query Frame = 0


Query: 1   MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKNGLSGVGHAAFVVPYTCYFL 60
           MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKNGL GVGHAAFV      + 
Sbjct: 1   MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKNGLRGVGHAAFVAKSVGKYG 60

Query: 61  IEIVAFWRLFDLKLRLCDLFCRQSLLENTAFSVVLCLVVGGCILRFSKLFVRPVLFWTGA 120
            +                                 C +V G                   
Sbjct: 61  FQ---------------------------------CGLVAGTFT---------------L 120

Query: 121 FSCRLVSGRHPSFWQLFFSIFLKVLLNGLIAGAVAGAAIATRTRSWSQVVGMAALVSAFS 180
             C +   R  + W           LNGLIAGAVAGAAIATRTRSWSQV GMAALVSAFS
Sbjct: 121 THCGIQRYRRKNDW-----------LNGLIAGAVAGAAIATRTRSWSQVFGMAALVSAFS 130

Query: 181 AAAEYSKSL 190
           AAAEYS+SL
Sbjct: 181 AAAEYSRSL 130

[Close]

BLAST of CaUC09G163570 vs. NCBI nr
Match: XP_038896772.1 (outer envelope pore protein 16-4, chloroplastic [Benincasa hispida])

HSP 1 Score: 150.2 bits (378), Expect = 1.8e-32
Identity = 98/189 (51.85%), Postives = 105/189 (55.56%), Query Frame = 0


Query: 1   MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKNGLSGVGHAAFVVPYTCYFL 60
           ME+ELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKNGLSGVGHAAFV      + 
Sbjct: 1   MEEELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKNGLSGVGHAAFVAKSVGKYG 60

Query: 61  IEIVAFWRLFDLKLRLCDLFCRQSLLENTAFSVVLCLVVGGCILRFSKLFVRPVLFWTGA 120
            +                                 C +V G                   
Sbjct: 61  FQ---------------------------------CGLVAGTFT---------------L 120

Query: 121 FSCRLVSGRHPSFWQLFFSIFLKVLLNGLIAGAVAGAAIATRTRSWSQVVGMAALVSAFS 180
             C +   R  + W           LNGLIAGAVAGA IATRTRSWSQVVGM ALVSAFS
Sbjct: 121 THCGIQRYRRKNDW-----------LNGLIAGAVAGAVIATRTRSWSQVVGMTALVSAFS 130

Query: 181 AAAEYSKSL 190
           AAAEYS+SL
Sbjct: 181 AAAEYSRSL 130

[Close]

BLAST of CaUC09G163570 vs. NCBI nr
Match: XP_022960078.1 (outer envelope pore protein 16-4, chloroplastic [Cucurbita moschata] >XP_022960079.1 outer envelope pore protein 16-4, chloroplastic [Cucurbita moschata] >XP_023004690.1 outer envelope pore protein 16-4, chloroplastic [Cucurbita maxima] >XP_023004691.1 outer envelope pore protein 16-4, chloroplastic [Cucurbita maxima] >XP_023513746.1 outer envelope pore protein 16-4, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023513747.1 outer envelope pore protein 16-4, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 149.4 bits (376), Expect = 3.0e-32
Identity = 99/189 (52.38%), Postives = 105/189 (55.56%), Query Frame = 0


Query: 1   MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKNGLSGVGHAAFVVPYTCYFL 60
           MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKNGLSGV HAAFV      + 
Sbjct: 1   MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKNGLSGVDHAAFVAKSVGKYG 60

Query: 61  IEIVAFWRLFDLKLRLCDLFCRQSLLENTAFSVVLCLVVGGCILRFSKLFVRPVLFWTGA 120
            +                                 C +V G                   
Sbjct: 61  FQ---------------------------------CGLVAGVFT---------------L 120

Query: 121 FSCRLVSGRHPSFWQLFFSIFLKVLLNGLIAGAVAGAAIATRTRSWSQVVGMAALVSAFS 180
             C +   R  + W           LNGLIAGAVAGAAIATRTRSWSQV GMAALVSAFS
Sbjct: 121 THCGIQRYRRKNDW-----------LNGLIAGAVAGAAIATRTRSWSQVGGMAALVSAFS 130

Query: 181 AAAEYSKSL 190
           AAAEYS+SL
Sbjct: 181 AAAEYSRSL 130

[Close]

BLAST of CaUC09G163570 vs. NCBI nr
Match: XP_008451566.1 (PREDICTED: outer envelope pore protein 16-4, chloroplastic [Cucumis melo] >KAA0067993.1 outer envelope pore protein 16-4 [Cucumis melo var. makuwa] >TYK18134.1 outer envelope pore protein 16-4 [Cucumis melo var. makuwa])

HSP 1 Score: 148.3 bits (373), Expect = 6.7e-32
Identity = 97/189 (51.32%), Postives = 106/189 (56.08%), Query Frame = 0


Query: 1   MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKNGLSGVGHAAFVVPYTCYFL 60
           MEDELNGVVPCSSLAVES+IRVGTAGALWGLC+GPYNSRKNGLSGV HAAFV      + 
Sbjct: 1   MEDELNGVVPCSSLAVESSIRVGTAGALWGLCLGPYNSRKNGLSGVSHAAFVAKSVGKYG 60

Query: 61  IEIVAFWRLFDLKLRLCDLFCRQSLLENTAFSVVLCLVVGGCILRFSKLFVRPVLFWTGA 120
            +                                 C +V G                   
Sbjct: 61  FQ---------------------------------CGLVAGTFT---------------L 120

Query: 121 FSCRLVSGRHPSFWQLFFSIFLKVLLNGLIAGAVAGAAIATRTRSWSQVVGMAALVSAFS 180
             C +   R  + W           LNGLIAGAVAGAAIAT+TRSWSQVVGMAALVSAFS
Sbjct: 121 THCGIQRYRRRNDW-----------LNGLIAGAVAGAAIATKTRSWSQVVGMAALVSAFS 130

Query: 181 AAAEYSKSL 190
           AAAEYS+SL
Sbjct: 181 AAAEYSRSL 130

[Close]

BLAST of CaUC09G163570 vs. NCBI nr
Match: XP_004136026.1 (outer envelope pore protein 16-4, chloroplastic [Cucumis sativus] >KGN44942.1 hypothetical protein Csa_016585 [Cucumis sativus])

HSP 1 Score: 146.4 bits (368), Expect = 2.6e-31
Identity = 96/189 (50.79%), Postives = 106/189 (56.08%), Query Frame = 0


Query: 1   MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKNGLSGVGHAAFVVPYTCYFL 60
           MEDELNGVVPCSSLAVES+IRVGTAGALWGLC+GPYNSRKNGL+GV HAAFV      + 
Sbjct: 1   MEDELNGVVPCSSLAVESSIRVGTAGALWGLCLGPYNSRKNGLTGVAHAAFVARSVGKYG 60

Query: 61  IEIVAFWRLFDLKLRLCDLFCRQSLLENTAFSVVLCLVVGGCILRFSKLFVRPVLFWTGA 120
            +                                 C +V G                   
Sbjct: 61  FQ---------------------------------CGLVAGTFT---------------L 120

Query: 121 FSCRLVSGRHPSFWQLFFSIFLKVLLNGLIAGAVAGAAIATRTRSWSQVVGMAALVSAFS 180
             C +   R  + W           LNGLIAGAVAGAAIAT+TRSWSQVVGMAALVSAFS
Sbjct: 121 THCGIQRYRKRNDW-----------LNGLIAGAVAGAAIATKTRSWSQVVGMAALVSAFS 130

Query: 181 AAAEYSKSL 190
           AAAEYS+SL
Sbjct: 181 AAAEYSRSL 130

[Close]

BLAST of CaUC09G163570 vs. ExPASy Swiss-Prot
Match: Q9LZH8 (Outer envelope pore protein 16-4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OEP164 PE=2 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 4.9e-17
Identity = 68/188 (36.17%), Postives = 85/188 (45.21%), Query Frame = 0


Query: 1   MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKNGLSGVGHAAFVVPYTCYFL 60
           ME+EL   VPCSSL VES +RV TAG L+GLC GP ++RK GLSGV  A+FV      F 
Sbjct: 1   MEEELLSAVPCSSLTVESVLRVATAGGLYGLCAGPRDARKIGLSGVSQASFVAKSIGRFG 60

Query: 61  IEIVAFWRLFDLKLRLCDLFCRQSLLENTAFSVVLCLVVGGCILRFSKLFVRPVLFWTGA 120
            +                                 C +V G                   
Sbjct: 61  FQ---------------------------------CGLVSGVFT---------------M 120

Query: 121 FSCRLVSGRHPSFWQLFFSIFLKVLLNGLIAGAVAGAAIATRTRSWSQVVGMAALVSAFS 180
             C L   R  + W           +N L+ GAVAGAA+A  TR+W+QVVGMA LVSAFS
Sbjct: 121 THCGLQRYRGKNDW-----------VNALVGGAVAGAAVAISTRNWTQVVGMAGLVSAFS 129

Query: 181 AAAEYSKS 189
             A  +++
Sbjct: 181 VLANCTRT 129

[Close]

BLAST of CaUC09G163570 vs. ExPASy TrEMBL
Match: A0A6J1CRH2 (outer envelope pore protein 16-4, chloroplastic isoform X2 OS=Momordica charantia OX=3673 GN=LOC111013582 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 5.0e-33
Identity = 99/189 (52.38%), Postives = 105/189 (55.56%), Query Frame = 0


Query: 1   MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKNGLSGVGHAAFVVPYTCYFL 60
           MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKNGL GVGHAAFV      + 
Sbjct: 1   MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKNGLRGVGHAAFVAKSVGKYG 60

Query: 61  IEIVAFWRLFDLKLRLCDLFCRQSLLENTAFSVVLCLVVGGCILRFSKLFVRPVLFWTGA 120
            +                                 C +V G                   
Sbjct: 61  FQ---------------------------------CGLVAGTFT---------------L 120

Query: 121 FSCRLVSGRHPSFWQLFFSIFLKVLLNGLIAGAVAGAAIATRTRSWSQVVGMAALVSAFS 180
             C +   R  + W           LNGLIAGAVAGAAIATRTRSWSQV GMAALVSAFS
Sbjct: 121 THCGIQRYRRKNDW-----------LNGLIAGAVAGAAIATRTRSWSQVFGMAALVSAFS 130

Query: 181 AAAEYSKSL 190
           AAAEYS+SL
Sbjct: 181 AAAEYSRSL 130

[Close]

BLAST of CaUC09G163570 vs. ExPASy TrEMBL
Match: A0A6J1KSU1 (outer envelope pore protein 16-4, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111497910 PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 1.5e-32
Identity = 99/189 (52.38%), Postives = 105/189 (55.56%), Query Frame = 0


Query: 1   MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKNGLSGVGHAAFVVPYTCYFL 60
           MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKNGLSGV HAAFV      + 
Sbjct: 1   MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKNGLSGVDHAAFVAKSVGKYG 60

Query: 61  IEIVAFWRLFDLKLRLCDLFCRQSLLENTAFSVVLCLVVGGCILRFSKLFVRPVLFWTGA 120
            +                                 C +V G                   
Sbjct: 61  FQ---------------------------------CGLVAGVFT---------------L 120

Query: 121 FSCRLVSGRHPSFWQLFFSIFLKVLLNGLIAGAVAGAAIATRTRSWSQVVGMAALVSAFS 180
             C +   R  + W           LNGLIAGAVAGAAIATRTRSWSQV GMAALVSAFS
Sbjct: 121 THCGIQRYRRKNDW-----------LNGLIAGAVAGAAIATRTRSWSQVGGMAALVSAFS 130

Query: 181 AAAEYSKSL 190
           AAAEYS+SL
Sbjct: 181 AAAEYSRSL 130

[Close]

BLAST of CaUC09G163570 vs. ExPASy TrEMBL
Match: A0A6J1H7T5 (outer envelope pore protein 16-4, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111460933 PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 1.5e-32
Identity = 99/189 (52.38%), Postives = 105/189 (55.56%), Query Frame = 0


Query: 1   MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKNGLSGVGHAAFVVPYTCYFL 60
           MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKNGLSGV HAAFV      + 
Sbjct: 1   MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKNGLSGVDHAAFVAKSVGKYG 60

Query: 61  IEIVAFWRLFDLKLRLCDLFCRQSLLENTAFSVVLCLVVGGCILRFSKLFVRPVLFWTGA 120
            +                                 C +V G                   
Sbjct: 61  FQ---------------------------------CGLVAGVFT---------------L 120

Query: 121 FSCRLVSGRHPSFWQLFFSIFLKVLLNGLIAGAVAGAAIATRTRSWSQVVGMAALVSAFS 180
             C +   R  + W           LNGLIAGAVAGAAIATRTRSWSQV GMAALVSAFS
Sbjct: 121 THCGIQRYRRKNDW-----------LNGLIAGAVAGAAIATRTRSWSQVGGMAALVSAFS 130

Query: 181 AAAEYSKSL 190
           AAAEYS+SL
Sbjct: 181 AAAEYSRSL 130

[Close]

BLAST of CaUC09G163570 vs. ExPASy TrEMBL
Match: A0A5A7VIR9 (Outer envelope pore protein 16-4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G00640 PE=4 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 3.3e-32
Identity = 97/189 (51.32%), Postives = 106/189 (56.08%), Query Frame = 0


Query: 1   MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKNGLSGVGHAAFVVPYTCYFL 60
           MEDELNGVVPCSSLAVES+IRVGTAGALWGLC+GPYNSRKNGLSGV HAAFV      + 
Sbjct: 1   MEDELNGVVPCSSLAVESSIRVGTAGALWGLCLGPYNSRKNGLSGVSHAAFVAKSVGKYG 60

Query: 61  IEIVAFWRLFDLKLRLCDLFCRQSLLENTAFSVVLCLVVGGCILRFSKLFVRPVLFWTGA 120
            +                                 C +V G                   
Sbjct: 61  FQ---------------------------------CGLVAGTFT---------------L 120

Query: 121 FSCRLVSGRHPSFWQLFFSIFLKVLLNGLIAGAVAGAAIATRTRSWSQVVGMAALVSAFS 180
             C +   R  + W           LNGLIAGAVAGAAIAT+TRSWSQVVGMAALVSAFS
Sbjct: 121 THCGIQRYRRRNDW-----------LNGLIAGAVAGAAIATKTRSWSQVVGMAALVSAFS 130

Query: 181 AAAEYSKSL 190
           AAAEYS+SL
Sbjct: 181 AAAEYSRSL 130

[Close]

BLAST of CaUC09G163570 vs. ExPASy TrEMBL
Match: A0A1S3BSK4 (outer envelope pore protein 16-4, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103492809 PE=4 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 3.3e-32
Identity = 97/189 (51.32%), Postives = 106/189 (56.08%), Query Frame = 0


Query: 1   MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKNGLSGVGHAAFVVPYTCYFL 60
           MEDELNGVVPCSSLAVES+IRVGTAGALWGLC+GPYNSRKNGLSGV HAAFV      + 
Sbjct: 1   MEDELNGVVPCSSLAVESSIRVGTAGALWGLCLGPYNSRKNGLSGVSHAAFVAKSVGKYG 60

Query: 61  IEIVAFWRLFDLKLRLCDLFCRQSLLENTAFSVVLCLVVGGCILRFSKLFVRPVLFWTGA 120
            +                                 C +V G                   
Sbjct: 61  FQ---------------------------------CGLVAGTFT---------------L 120

Query: 121 FSCRLVSGRHPSFWQLFFSIFLKVLLNGLIAGAVAGAAIATRTRSWSQVVGMAALVSAFS 180
             C +   R  + W           LNGLIAGAVAGAAIAT+TRSWSQVVGMAALVSAFS
Sbjct: 121 THCGIQRYRRRNDW-----------LNGLIAGAVAGAAIATKTRSWSQVVGMAALVSAFS 130

Query: 181 AAAEYSKSL 190
           AAAEYS+SL
Sbjct: 181 AAAEYSRSL 130

[Close]

BLAST of CaUC09G163570 vs. TAIR 10
Match: AT3G62880.1 (Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein )

HSP 1 Score: 89.4 bits (220), Expect = 3.5e-18
Identity = 68/188 (36.17%), Postives = 85/188 (45.21%), Query Frame = 0


Query: 1   MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKNGLSGVGHAAFVVPYTCYFL 60
           ME+EL   VPCSSL VES +RV TAG L+GLC GP ++RK GLSGV  A+FV      F 
Sbjct: 1   MEEELLSAVPCSSLTVESVLRVATAGGLYGLCAGPRDARKIGLSGVSQASFVAKSIGRFG 60

Query: 61  IEIVAFWRLFDLKLRLCDLFCRQSLLENTAFSVVLCLVVGGCILRFSKLFVRPVLFWTGA 120
            +                                 C +V G                   
Sbjct: 61  FQ---------------------------------CGLVSGVFT---------------M 120

Query: 121 FSCRLVSGRHPSFWQLFFSIFLKVLLNGLIAGAVAGAAIATRTRSWSQVVGMAALVSAFS 180
             C L   R  + W           +N L+ GAVAGAA+A  TR+W+QVVGMA LVSAFS
Sbjct: 121 THCGLQRYRGKNDW-----------VNALVGGAVAGAAVAISTRNWTQVVGMAGLVSAFS 129

Query: 181 AAAEYSKS 189
             A  +++
Sbjct: 181 VLANCTRT 129

[Close]

BLAST of CaUC09G163570 vs. TAIR 10
Match: AT3G62880.2 (Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein )

HSP 1 Score: 89.4 bits (220), Expect = 3.5e-18
Identity = 68/188 (36.17%), Postives = 85/188 (45.21%), Query Frame = 0


Query: 1   MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKNGLSGVGHAAFVVPYTCYFL 60
           ME+EL   VPCSSL VES +RV TAG L+GLC GP ++RK GLSGV  A+FV      F 
Sbjct: 1   MEEELLSAVPCSSLTVESVLRVATAGGLYGLCAGPRDARKIGLSGVSQASFVAKSIGRFG 60

Query: 61  IEIVAFWRLFDLKLRLCDLFCRQSLLENTAFSVVLCLVVGGCILRFSKLFVRPVLFWTGA 120
            +                                 C +V G                   
Sbjct: 61  FQ---------------------------------CGLVSGVFT---------------M 120

Query: 121 FSCRLVSGRHPSFWQLFFSIFLKVLLNGLIAGAVAGAAIATRTRSWSQVVGMAALVSAFS 180
             C L   R  + W           +N L+ GAVAGAA+A  TR+W+QVVGMA LVSAFS
Sbjct: 121 THCGLQRYRGKNDW-----------VNALVGGAVAGAAVAISTRNWTQVVGMAGLVSAFS 129

Query: 181 AAAEYSKS 189
             A  +++
Sbjct: 181 VLANCTRT 129

The following BLAST results are available for this feature:

BLAST of CaUC09G163570 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022143748.1	1.0e-32	52.38	outer envelope pore protein 16-4, chloroplastic isoform X2 [Momordica charantia]	[more]
XP_038896772.1	1.8e-32	51.85	outer envelope pore protein 16-4, chloroplastic [Benincasa hispida]	[more]
XP_022960078.1	3.0e-32	52.38	outer envelope pore protein 16-4, chloroplastic [Cucurbita moschata] >XP_0229600...	[more]
XP_008451566.1	6.7e-32	51.32	PREDICTED: outer envelope pore protein 16-4, chloroplastic [Cucumis melo] >KAA00...	[more]
XP_004136026.1	2.6e-31	50.79	outer envelope pore protein 16-4, chloroplastic [Cucumis sativus] >KGN44942.1 hy...	[more]

BLAST of CaUC09G163570 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LZH8	4.9e-17	36.17	Outer envelope pore protein 16-4, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of CaUC09G163570 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CRH2	5.0e-33	52.38	outer envelope pore protein 16-4, chloroplastic isoform X2 OS=Momordica charanti...	[more]
A0A6J1KSU1	1.5e-32	52.38	outer envelope pore protein 16-4, chloroplastic OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1H7T5	1.5e-32	52.38	outer envelope pore protein 16-4, chloroplastic OS=Cucurbita moschata OX=3662 GN...	[more]
A0A5A7VIR9	3.3e-32	51.32	Outer envelope pore protein 16-4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3BSK4	3.3e-32	51.32	outer envelope pore protein 16-4, chloroplastic OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of CaUC09G163570 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G62880.1	3.5e-18	36.17	Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family...	[more]
AT3G62880.2	3.5e-18	36.17	Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR14110:SF5	OUTER ENVELOPE PORE PROTEIN 16-4, CHLOROPLASTIC	coord: 1..53
None	No IPR available	PANTHER	PTHR14110:SF5	OUTER ENVELOPE PORE PROTEIN 16-4, CHLOROPLASTIC	coord: 146..187
IPR039175	Mitochondrial import inner membrane translocase subunit TIM22	PANTHER	PTHR14110	MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22	coord: 146..187
IPR039175	Mitochondrial import inner membrane translocase subunit TIM22	PANTHER	PTHR14110	MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22	coord: 1..53

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC09G163570.1	CaUC09G163570.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045039	protein insertion into mitochondrial inner membrane
cellular_component	GO:0042721	TIM22 mitochondrial import inner membrane insertion complex