CaUC09G163080 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGGCGTCTCAGTGAGCGTTTACAATGGCCTGCGGCGCTATTTGAGGAGGAAAAGCTACCGGAAACTGGCTGGATCGGTGGGCCGAAGGACGGAGACAGTGCAACTTGGGGCCACTGGAGGGAGGCGGCGGCGGCGGATTTGGCGGATCAAGATCTCGCCTAAGCTCAGGCTGTTCCGGCGGTTGCCGTCACTGAAGAAACTGCTTCTATGGCTGAGGGATTCCTATGTCAAGGCGATGTTGGCATTTGCCAACTCGAGGGTCATCGGCTCCGGCATCAGCGGCGGGGGCGGCGGCAGCGATGAGATCTGGGGCGGCGCCGGAAGGAGCACGCTGAAGGAGTATGATGAGAAAATGATCGCTGAGATCTACAAGTCGTTGGTGGTGGCGCAGGGACGGTTGCCGCCGCCGGAACCTGTCCGGCCGAGTTGGGTTGGCGGCCGGTTGCCGACGGTGGCGGAATAA ATGGAAGGCGTCTCAGTGAGCGTTTACAATGGCCTGCGGCGCTATTTGAGGAGGAAAAGCTACCGGAAACTGGCTGGATCGGTGGGCCGAAGGACGGAGACAGTGCAACTTGGGGCCACTGGAGGGAGGCGGCGGCGGCGGATTTGGCGGATCAAGATCTCGCCTAAGCTCAGGCTGTTCCGGCGGTTGCCGTCACTGAAGAAACTGCTTCTATGGCTGAGGGATTCCTATGTCAAGGCGATGTTGGCATTTGCCAACTCGAGGGTCATCGGCTCCGGCATCAGCGGCGGGGGCGGCGGCAGCGATGAGATCTGGGGCGGCGCCGGAAGGAGCACGCTGAAGGAGTATGATGAGAAAATGATCGCTGAGATCTACAAGTCGTTGGTGGTGGCGCAGGGACGGTTGCCGCCGCCGGAACCTGTCCGGCCGAGTTGGGTTGGCGGCCGGTTGCCGACGGTGGCGGAATAA ATGGAAGGCGTCTCAGTGAGCGTTTACAATGGCCTGCGGCGCTATTTGAGGAGGAAAAGCTACCGGAAACTGGCTGGATCGGTGGGCCGAAGGACGGAGACAGTGCAACTTGGGGCCACTGGAGGGAGGCGGCGGCGGCGGATTTGGCGGATCAAGATCTCGCCTAAGCTCAGGCTGTTCCGGCGGTTGCCGTCACTGAAGAAACTGCTTCTATGGCTGAGGGATTCCTATGTCAAGGCGATGTTGGCATTTGCCAACTCGAGGGTCATCGGCTCCGGCATCAGCGGCGGGGGCGGCGGCAGCGATGAGATCTGGGGCGGCGCCGGAAGGAGCACGCTGAAGGAGTATGATGAGAAAATGATCGCTGAGATCTACAAGTCGTTGGTGGTGGCGCAGGGACGGTTGCCGCCGCCGGAACCTGTCCGGCCGAGTTGGGTTGGCGGCCGGTTGCCGACGGTGGCGGAATAA MEGVSVSVYNGLRRYLRRKSYRKLAGSVGRRTETVQLGATGGRRRRRIWRIKISPKLRLFRRLPSLKKLLLWLRDSYVKAMLAFANSRVIGSGISGGGGGSDEIWGGAGRSTLKEYDEKMIAEIYKSLVVAQGRLPPPEPVRPSWVGGRLPTVAE Homology
BLAST of CaUC09G163080 vs. NCBI nr
Match: XP_038897064.1 (uncharacterized protein LOC120085238 isoform X1 [Benincasa hispida]) HSP 1 Score: 273.9 bits (699), Expect = 8.7e-70 Identity = 143/155 (92.26%), Postives = 145/155 (93.55%), Query Frame = 0
BLAST of CaUC09G163080 vs. NCBI nr
Match: XP_038897065.1 (uncharacterized protein LOC120085238 isoform X2 [Benincasa hispida]) HSP 1 Score: 273.9 bits (699), Expect = 8.7e-70 Identity = 143/155 (92.26%), Postives = 145/155 (93.55%), Query Frame = 0
BLAST of CaUC09G163080 vs. NCBI nr
Match: KAA0046671.1 (uncharacterized protein E6C27_scaffold427G00380 [Cucumis melo var. makuwa] >TYK18206.1 uncharacterized protein E5676_scaffold411G001450 [Cucumis melo var. makuwa]) HSP 1 Score: 268.5 bits (685), Expect = 3.7e-68 Identity = 142/156 (91.03%), Postives = 143/156 (91.67%), Query Frame = 0
BLAST of CaUC09G163080 vs. NCBI nr
Match: XP_016901040.1 (PREDICTED: uncharacterized protein LOC103492779 [Cucumis melo]) HSP 1 Score: 266.5 bits (680), Expect = 1.4e-67 Identity = 141/156 (90.38%), Postives = 142/156 (91.03%), Query Frame = 0
BLAST of CaUC09G163080 vs. NCBI nr
Match: XP_031744261.1 (uncharacterized protein LOC101203703 [Cucumis sativus] >KGN44989.1 hypothetical protein Csa_016672 [Cucumis sativus]) HSP 1 Score: 265.8 bits (678), Expect = 2.4e-67 Identity = 141/156 (90.38%), Postives = 143/156 (91.67%), Query Frame = 0
BLAST of CaUC09G163080 vs. ExPASy TrEMBL
Match: A0A5A7TZB4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G001450 PE=4 SV=1) HSP 1 Score: 268.5 bits (685), Expect = 1.8e-68 Identity = 142/156 (91.03%), Postives = 143/156 (91.67%), Query Frame = 0
BLAST of CaUC09G163080 vs. ExPASy TrEMBL
Match: A0A1S4DZ96 (uncharacterized protein LOC103492779 OS=Cucumis melo OX=3656 GN=LOC103492779 PE=4 SV=1) HSP 1 Score: 266.5 bits (680), Expect = 6.7e-68 Identity = 141/156 (90.38%), Postives = 142/156 (91.03%), Query Frame = 0
BLAST of CaUC09G163080 vs. ExPASy TrEMBL
Match: A0A0A0K7Z4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G405950 PE=4 SV=1) HSP 1 Score: 265.8 bits (678), Expect = 1.2e-67 Identity = 141/156 (90.38%), Postives = 143/156 (91.67%), Query Frame = 0
BLAST of CaUC09G163080 vs. ExPASy TrEMBL
Match: A0A6J1GPC4 (uncharacterized protein LOC111456226 OS=Cucurbita moschata OX=3662 GN=LOC111456226 PE=4 SV=1) HSP 1 Score: 240.4 bits (612), Expect = 5.2e-60 Identity = 134/157 (85.35%), Postives = 135/157 (85.99%), Query Frame = 0
BLAST of CaUC09G163080 vs. ExPASy TrEMBL
Match: A0A6J1JLB7 (uncharacterized protein LOC111487968 OS=Cucurbita maxima OX=3661 GN=LOC111487968 PE=4 SV=1) HSP 1 Score: 239.2 bits (609), Expect = 1.2e-59 Identity = 133/157 (84.71%), Postives = 135/157 (85.99%), Query Frame = 0
BLAST of CaUC09G163080 vs. TAIR 10
Match: AT2G47485.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G62650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 94.0 bits (232), Expect = 1.2e-19 Identity = 61/132 (46.21%), Postives = 80/132 (60.61%), Query Frame = 0
BLAST of CaUC09G163080 vs. TAIR 10
Match: AT3G62650.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G47485.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 92.8 bits (229), Expect = 2.6e-19 Identity = 64/128 (50.00%), Postives = 82/128 (64.06%), Query Frame = 0
BLAST of CaUC09G163080 vs. TAIR 10
Match: AT3G62650.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G47485.1); Has 57 Blast hits to 57 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 92.8 bits (229), Expect = 2.6e-19 Identity = 64/128 (50.00%), Postives = 82/128 (64.06%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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