CaUC09G161760 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AACATAAACCATATATACATGAGGAAGCCAGCTGATTCCACCGCCGCCAACATCCGGCTGAGGAAAGGCCTTTGGTCGCCGGAGGAGGACGAGAAGCTGATGAGATACATGCTCTCCAATGGCCAAGGCTGCTGGACCGACATTGCCCGAAATGCCGGCCTCCTCCGCTGCGGCAAGAGCTGCCGCCTCCGCTGGATTAACTATCTCCGCCCTGACCTTAAACGTGGAGCTTTCTCTCCTCAAGAAGAACAACTCATTCTCCATCTGCATTCTCTTCTGGGCAATAGGTAATAAATTCAAAACCAATTAGCCATTTAAATTCAAGATTTATTGAGAATGAAAGAGATTACAATTAGCCATTTAAAATTATAAAAATTAAAATGGAACAAAGTTTAAAGTAAGCAACCAAAATAGTATTTTAATCTAATTCTCTTATATATATACTTCTATTTTTATTCTATTTTGGTTCCTATATTTTTTAAATTAGAGTTGGATGAATTTTGATTAATTAGTTATAATGAGTTTAGTTGTTGGTGTTGAAGTTTTCAATTTTTTTTAATCTAATGAAAATTATTGTTGGTACTTTTTTTCTAAACACCTCACTGCAAATATAGAAATAGAGCTATTCTCTCTGCCATTTTCTCTTTTCTCATAATATGAATAAAATGATCTTCCTCTCTCTACTTTGTTTCCTCCTCTTTAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTCCTTTAGAATATTGATAATCATAAAACATTATATTTTTTTCATGTTCATTCATGCATTTTATGAATCAAAGTAAAAAGTAAGGAGAAATTGGGTAGTGTTATGCTTTTATTTAAGCTTTAATATAAAAGTGGCCAAATTAAACATTAGAAAAGCTTGAGTAGGGATTATGATCAAAGTCAAATGTAGGCCATACTTGTGGTTAATAGGTTTTGAGTAAATCATTGAGTGCAAAATAATTAATACAACGAATCCACATCACTTGATCATATTAGATGAAAACCAAAGACATTTATTTCATTGATGTCAATTAATCATTTAGTTGTTGGATACATTATTTTCTATAGATTAGAATTTACGAATTGATTTACTAAATAGTTTTTTTTAGAATTAAGCTTAATACTATTTCTATCTATTGATTTATTTATTATTTCTTTTATGTTATCTACTTTTGAAGGATGTTTTAAAAACATCCAATTAAGTTTTGAAAATTAAAAAGTAGTTTTTATTTTTGGAATTTGACTAAAGAATTTATGTGTTTAGTTAGGGAAAATGAAAACTATGGTAAAAAAGTTGTAAGAAAATAAACAAAATTTTAAAAATAAAAAACAAAAAATTAAGCTTGGTTGGCAATCCGTTTGGTTTTTTGTTTTTTAAAATTAAGCCTATAAATATCATTTTCATTTGTTTGGTCCTATACTTTGTAGTCTAAATTTCAAGAGTGTGTTTAAAATCTAAGCCAAAATTTGAAAACTAAGGACCCATTTACTAATTATTTGATTTTTATTTTTTAAAAATTGAATTTATAAATACTATACTTTCAACTTTTGATTTGTTTGTTTTGTTATTTATTTGTTTGGAGTGTTTCAAAAGTCTAAGATAATTTTTAAAAAATTCATTTTGAATTCTGGAATTCAGAATTCAAATGTGAAAGATAATAATTATAGTAAGTCAGTGGTAACAAAAAAAAAATTATAATTTTCCAAAATCAAAACCTTAATATTTATTAAAATGGGTCTAAAAACGTAGTTTTTTAAGTTTTTTTTTTTTTTTAAAAAAAAAAAATTAGTTAAGAATTCAAATATTTACATAAAAAAAATATTAAAAAATGGTTAGAAAACAAACAAAATCTTTAAAAACTATCAAATTATTGTTACCAAACCATATCTAAATACTTTATTTAATTGAGAAATTATTGTAAATAGAAAAAATATCAAACTATCTACAAATCTAGAAAAAAATTTAGCCATAGACTTTTGTTGCTCTTTTTATCACCAAGCGATAGAAGCCTATCACAGTCTATCAATTAGTGATAGAAATTTATTGTAGTCTATCGTTGAAATTTTTATATATTTGTAAATAATTTTGCTTATTTTTCTATATTTGAAAATAACCCATTATAATTTTGTAAAAATTTAAAGGTGTCTTTGAAATAAATTACAAAGTTTAACATTGTATTATTTTTATAATTTAGCCAAAATTTTATTAAAATTAAAATTTGATAATTTATCAGGTGGTCTCAAATAGCAGCACGTCTACCTGGACGAACGGATAATGAAATAAAGAATTTCTGGAACTCCACGTTGAAAAAGAGAATGAAGAATCGTAATTACAATATTACCCCTTCTCCAAACTTAAGCCAATCATCCGAACCTAGAAGTAACAGCAGCTTCGGAGAGCACCTAAGTTCTTCCGAACCATTATTATTCCCTACATTATTGGACGACAACCACCAATTATACAACACGTTTGGTGGTGGTGGTGCAATGGAAGAGGGGTATTTTGGGGATTACACCACAACAATATTAGAGCCTAAGGAATTTGTGAGGGACTTTTATGACTTTTCTCACCTTCCTCCACTTGGAAATGGAGACATTATTATTGAAGAGTTTAAGGTACCATCCCTAAACATACAAGAAAACAACCATCAATTCAATCATGAAGTGAGTTTTAAGGTGGAGGATATGTTTGGAAACAATTCTCAAAACCAGCTTCAAGATAATTTTAAAATTGGAGCTTGGGATTTTGACCCTTTTATCCTTTGATTTCCAAGTTGATTAATTAACTTTCTT AACATAAACCATATATACATGAGGAAGCCAGCTGATTCCACCGCCGCCAACATCCGGCTGAGGAAAGGCCTTTGGTCGCCGGAGGAGGACGAGAAGCTGATGAGATACATGCTCTCCAATGGCCAAGGCTGCTGGACCGACATTGCCCGAAATGCCGGCCTCCTCCGCTGCGGCAAGAGCTGCCGCCTCCGCTGGATTAACTATCTCCGCCCTGACCTTAAACGTGGAGCTTTCTCTCCTCAAGAAGAACAACTCATTCTCCATCTGCATTCTCTTCTGGGCAATAGGTGGTCTCAAATAGCAGCACGTCTACCTGGACGAACGGATAATGAAATAAAGAATTTCTGGAACTCCACGTTGAAAAAGAGAATGAAGAATCGTAATTACAATATTACCCCTTCTCCAAACTTAAGCCAATCATCCGAACCTAGAAGTAACAGCAGCTTCGGAGAGCACCTAAGTTCTTCCGAACCATTATTATTCCCTACATTATTGGACGACAACCACCAATTATACAACACGTTTGGTGGTGGTGGTGCAATGGAAGAGGGGTATTTTGGGGATTACACCACAACAATATTAGAGCCTAAGGAATTTGTGAGGGACTTTTATGACTTTTCTCACCTTCCTCCACTTGGAAATGGAGACATTATTATTGAAGAGTTTAAGGTACCATCCCTAAACATACAAGAAAACAACCATCAATTCAATCATGAAGTGAGTTTTAAGGTGGAGGATATGTTTGGAAACAATTCTCAAAACCAGCTTCAAGATAATTTTAAAATTGGAGCTTGGGATTTTGACCCTTTTATCCTTTGATTTCCAAGTTGATTAATTAACTTTCTT ATGAGGAAGCCAGCTGATTCCACCGCCGCCAACATCCGGCTGAGGAAAGGCCTTTGGTCGCCGGAGGAGGACGAGAAGCTGATGAGATACATGCTCTCCAATGGCCAAGGCTGCTGGACCGACATTGCCCGAAATGCCGGCCTCCTCCGCTGCGGCAAGAGCTGCCGCCTCCGCTGGATTAACTATCTCCGCCCTGACCTTAAACGTGGAGCTTTCTCTCCTCAAGAAGAACAACTCATTCTCCATCTGCATTCTCTTCTGGGCAATAGGTGGTCTCAAATAGCAGCACGTCTACCTGGACGAACGGATAATGAAATAAAGAATTTCTGGAACTCCACGTTGAAAAAGAGAATGAAGAATCGTAATTACAATATTACCCCTTCTCCAAACTTAAGCCAATCATCCGAACCTAGAAGTAACAGCAGCTTCGGAGAGCACCTAAGTTCTTCCGAACCATTATTATTCCCTACATTATTGGACGACAACCACCAATTATACAACACGTTTGGTGGTGGTGGTGCAATGGAAGAGGGGTATTTTGGGGATTACACCACAACAATATTAGAGCCTAAGGAATTTGTGAGGGACTTTTATGACTTTTCTCACCTTCCTCCACTTGGAAATGGAGACATTATTATTGAAGAGTTTAAGGTACCATCCCTAAACATACAAGAAAACAACCATCAATTCAATCATGAAGTGAGTTTTAAGGTGGAGGATATGTTTGGAAACAATTCTCAAAACCAGCTTCAAGATAATTTTAAAATTGGAGCTTGGGATTTTGACCCTTTTATCCTTTGA MRKPADSTAANIRLRKGLWSPEEDEKLMRYMLSNGQGCWTDIARNAGLLRCGKSCRLRWINYLRPDLKRGAFSPQEEQLILHLHSLLGNRWSQIAARLPGRTDNEIKNFWNSTLKKRMKNRNYNITPSPNLSQSSEPRSNSSFGEHLSSSEPLLFPTLLDDNHQLYNTFGGGGAMEEGYFGDYTTTILEPKEFVRDFYDFSHLPPLGNGDIIIEEFKVPSLNIQENNHQFNHEVSFKVEDMFGNNSQNQLQDNFKIGAWDFDPFIL Homology
BLAST of CaUC09G161760 vs. NCBI nr
Match: XP_038896276.1 (transcription factor MYB83, partial [Benincasa hispida]) HSP 1 Score: 511.9 bits (1317), Expect = 3.3e-141 Identity = 245/265 (92.45%), Postives = 253/265 (95.47%), Query Frame = 0
BLAST of CaUC09G161760 vs. NCBI nr
Match: XP_008461287.1 (PREDICTED: transcription factor MYB46 [Cucumis melo]) HSP 1 Score: 421.4 bits (1082), Expect = 5.8e-114 Identity = 228/288 (79.17%), Postives = 248/288 (86.11%), Query Frame = 0
BLAST of CaUC09G161760 vs. NCBI nr
Match: XP_004136117.1 (transcription factor MYB83 [Cucumis sativus] >KAE8646404.1 hypothetical protein Csa_016492 [Cucumis sativus]) HSP 1 Score: 412.9 bits (1060), Expect = 2.1e-111 Identity = 221/284 (77.82%), Postives = 239/284 (84.15%), Query Frame = 0
BLAST of CaUC09G161760 vs. NCBI nr
Match: XP_023549385.1 (transcription factor MYB83 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 372.9 bits (956), Expect = 2.4e-99 Identity = 207/314 (65.92%), Postives = 230/314 (73.25%), Query Frame = 0
BLAST of CaUC09G161760 vs. NCBI nr
Match: XP_022953992.1 (transcription factor MYB83 [Cucurbita moschata]) HSP 1 Score: 370.2 bits (949), Expect = 1.5e-98 Identity = 205/315 (65.08%), Postives = 228/315 (72.38%), Query Frame = 0
BLAST of CaUC09G161760 vs. ExPASy Swiss-Prot
Match: Q9C6U1 (Transcription factor MYB83 OS=Arabidopsis thaliana OX=3702 GN=MYB83 PE=2 SV=1) HSP 1 Score: 236.5 bits (602), Expect = 3.5e-61 Identity = 144/304 (47.37%), Postives = 173/304 (56.91%), Query Frame = 0
BLAST of CaUC09G161760 vs. ExPASy Swiss-Prot
Match: Q9LXV2 (Transcription factor MYB46 OS=Arabidopsis thaliana OX=3702 GN=MYB46 PE=2 SV=1) HSP 1 Score: 214.9 bits (546), Expect = 1.1e-54 Identity = 106/152 (69.74%), Postives = 121/152 (79.61%), Query Frame = 0
BLAST of CaUC09G161760 vs. ExPASy Swiss-Prot
Match: Q8LPH6 (Transcription factor MYB86 OS=Arabidopsis thaliana OX=3702 GN=MYB86 PE=2 SV=1) HSP 1 Score: 182.6 bits (462), Expect = 6.0e-45 Identity = 88/139 (63.31%), Postives = 108/139 (77.70%), Query Frame = 0
BLAST of CaUC09G161760 vs. ExPASy Swiss-Prot
Match: Q8VZQ2 (Transcription factor MYB61 OS=Arabidopsis thaliana OX=3702 GN=MYB61 PE=2 SV=1) HSP 1 Score: 182.2 bits (461), Expect = 7.8e-45 Identity = 87/147 (59.18%), Postives = 113/147 (76.87%), Query Frame = 0
BLAST of CaUC09G161760 vs. ExPASy Swiss-Prot
Match: P20027 (Myb-related protein Hv33 OS=Hordeum vulgare OX=4513 GN=MYB2 PE=2 SV=3) HSP 1 Score: 174.9 bits (442), Expect = 1.2e-42 Identity = 81/135 (60.00%), Postives = 100/135 (74.07%), Query Frame = 0
BLAST of CaUC09G161760 vs. ExPASy TrEMBL
Match: A0A1S3CED2 (transcription factor MYB46 OS=Cucumis melo OX=3656 GN=LOC103499922 PE=4 SV=1) HSP 1 Score: 421.4 bits (1082), Expect = 2.8e-114 Identity = 228/288 (79.17%), Postives = 248/288 (86.11%), Query Frame = 0
BLAST of CaUC09G161760 vs. ExPASy TrEMBL
Match: A0A6J1GPS9 (transcription factor MYB83 OS=Cucurbita moschata OX=3662 GN=LOC111456384 PE=4 SV=1) HSP 1 Score: 370.2 bits (949), Expect = 7.4e-99 Identity = 205/315 (65.08%), Postives = 228/315 (72.38%), Query Frame = 0
BLAST of CaUC09G161760 vs. ExPASy TrEMBL
Match: A0A6J1JS46 (transcription factor MYB83-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488411 PE=4 SV=1) HSP 1 Score: 360.1 bits (923), Expect = 7.7e-96 Identity = 199/318 (62.58%), Postives = 225/318 (70.75%), Query Frame = 0
BLAST of CaUC09G161760 vs. ExPASy TrEMBL
Match: A0A6J1DG43 (transcription factor MYB83-like OS=Momordica charantia OX=3673 GN=LOC111019786 PE=4 SV=1) HSP 1 Score: 332.4 bits (851), Expect = 1.7e-87 Identity = 189/307 (61.56%), Postives = 218/307 (71.01%), Query Frame = 0
BLAST of CaUC09G161760 vs. ExPASy TrEMBL
Match: A0A6J1JN89 (transcription factor MYB83-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111488411 PE=4 SV=1) HSP 1 Score: 313.2 bits (801), Expect = 1.1e-81 Identity = 170/257 (66.15%), Postives = 187/257 (72.76%), Query Frame = 0
BLAST of CaUC09G161760 vs. TAIR 10
Match: AT3G08500.1 (myb domain protein 83 ) HSP 1 Score: 236.5 bits (602), Expect = 2.5e-62 Identity = 144/304 (47.37%), Postives = 173/304 (56.91%), Query Frame = 0
BLAST of CaUC09G161760 vs. TAIR 10
Match: AT5G12870.1 (myb domain protein 46 ) HSP 1 Score: 214.9 bits (546), Expect = 7.7e-56 Identity = 106/152 (69.74%), Postives = 121/152 (79.61%), Query Frame = 0
BLAST of CaUC09G161760 vs. TAIR 10
Match: AT4G01680.1 (myb domain protein 55 ) HSP 1 Score: 183.0 bits (463), Expect = 3.2e-46 Identity = 81/109 (74.31%), Postives = 94/109 (86.24%), Query Frame = 0
BLAST of CaUC09G161760 vs. TAIR 10
Match: AT4G01680.3 (myb domain protein 55 ) HSP 1 Score: 183.0 bits (463), Expect = 3.2e-46 Identity = 81/109 (74.31%), Postives = 94/109 (86.24%), Query Frame = 0
BLAST of CaUC09G161760 vs. TAIR 10
Match: AT5G26660.1 (myb domain protein 86 ) HSP 1 Score: 182.6 bits (462), Expect = 4.2e-46 Identity = 88/139 (63.31%), Postives = 108/139 (77.70%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
|