CaUC09G157990 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC09G157990
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionGDSL esterase/lipase APG-like
LocationCiama_Chr09: 288524 .. 288820 (-)
RNA-Seq ExpressionCaUC09G157990
SyntenyCaUC09G157990
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTGCGTTTATGTGCTTCATCGTTTGTACAATAATATCTTTAGCGCCGGCGGGCGGCGGTGCTGTTGAGGCCGCTGCCACGATATTTCCGGCTATCCTAACGTTTGGCGACTCCGCCGTGGACGTCGGAAACAATAACAATCGTTTGAGCATGTTCAAGGCAAACTACCTTCCTTATGGTCGAGATTTCATAAACCACAAACCTACTGGCAGATTCTGTAATGGAAAACTTGTGTCTGATATTACTGGTAACATTCATCCAAAAACTTCTCCTCTCACCCACTCTTTTTCTTAA

mRNA sequence

ATGGCGCCGGCGGGCGGCGGTGCTGTTGAGGCCGCTGCCACGATATTTCCGGCTATCCTAACGTTTGGCGACTCCGCCGTGGACGTCGGAAACAATAACAATCGTTTGAGCATGTTCAAGGCAAACTACCTTCCTTATGGTCGAGATTTCATAAACCACAAACCTACTGGCAGATTCTGTAATGGAAAACTTGTGTCTGATATTACTGGTAACATTCATCCAAAAACTTCTCCTCTCACCCACTCTTTTTCTTAA

Coding sequence (CDS)

ATGGCGCCGGCGGGCGGCGGTGCTGTTGAGGCCGCTGCCACGATATTTCCGGCTATCCTAACGTTTGGCGACTCCGCCGTGGACGTCGGAAACAATAACAATCGTTTGAGCATGTTCAAGGCAAACTACCTTCCTTATGGTCGAGATTTCATAAACCACAAACCTACTGGCAGATTCTGTAATGGAAAACTTGTGTCTGATATTACTGGTAACATTCATCCAAAAACTTCTCCTCTCACCCACTCTTTTTCTTAA

Protein sequence

MAPAGGGAVEAAATIFPAILTFGDSAVDVGNNNNRLSMFKANYLPYGRDFINHKPTGRFCNGKLVSDITGNIHPKTSPLTHSFS
Homology
BLAST of CaUC09G157990 vs. NCBI nr
Match: XP_038898692.1 (GDSL esterase/lipase APG-like isoform X1 [Benincasa hispida])

HSP 1 Score: 119.0 bits (297), Expect = 1.9e-23
Identity = 54/62 (87.10%), Postives = 59/62 (95.16%), Query Frame = 0

Query: 8   AVEAAATIFPAILTFGDSAVDVGNNNNRLSMFKANYLPYGRDFINHKPTGRFCNGKLVSD 67
           A +AA TIFPAI TFGDSA+DVGNNNNR+++FKANYLPYGRDFINHKPTGRFCNGKLVSD
Sbjct: 63  ADDAATTIFPAIFTFGDSALDVGNNNNRMTLFKANYLPYGRDFINHKPTGRFCNGKLVSD 122

Query: 68  IT 70
           IT
Sbjct: 123 IT 124

BLAST of CaUC09G157990 vs. NCBI nr
Match: XP_038898693.1 (GDSL esterase/lipase APG-like isoform X2 [Benincasa hispida])

HSP 1 Score: 119.0 bits (297), Expect = 1.9e-23
Identity = 54/62 (87.10%), Postives = 59/62 (95.16%), Query Frame = 0

Query: 8   AVEAAATIFPAILTFGDSAVDVGNNNNRLSMFKANYLPYGRDFINHKPTGRFCNGKLVSD 67
           A +AA TIFPAI TFGDSA+DVGNNNNR+++FKANYLPYGRDFINHKPTGRFCNGKLVSD
Sbjct: 63  ADDAATTIFPAIFTFGDSALDVGNNNNRMTLFKANYLPYGRDFINHKPTGRFCNGKLVSD 122

Query: 68  IT 70
           IT
Sbjct: 123 IT 124

BLAST of CaUC09G157990 vs. NCBI nr
Match: XP_023000638.1 (putative leucine-rich repeat receptor-like protein kinase At2g19210 [Cucurbita maxima])

HSP 1 Score: 119.0 bits (297), Expect = 1.9e-23
Identity = 55/62 (88.71%), Postives = 58/62 (93.55%), Query Frame = 0

Query: 8    AVEAAATIFPAILTFGDSAVDVGNNNNRLSMFKANYLPYGRDFINHKPTGRFCNGKLVSD 67
            A  AAATIFPAILTFGDSA+DVGNNNNR ++FKANY PYGRDFINHKPTGRFCNGKLVSD
Sbjct: 943  AASAAATIFPAILTFGDSALDVGNNNNRFTLFKANYHPYGRDFINHKPTGRFCNGKLVSD 1002

Query: 68   IT 70
            IT
Sbjct: 1003 IT 1004

BLAST of CaUC09G157990 vs. NCBI nr
Match: XP_016902842.1 (PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g05700 isoform X3 [Cucumis melo])

HSP 1 Score: 118.6 bits (296), Expect = 2.5e-23
Identity = 54/59 (91.53%), Postives = 56/59 (94.92%), Query Frame = 0

Query: 11  AAATIFPAILTFGDSAVDVGNNNNRLSMFKANYLPYGRDFINHKPTGRFCNGKLVSDIT 70
           AA TIFPAI TFGDSA+DVGNNNNR +MFKANYLPYGRDFINHKPTGRFCNGKLVSDIT
Sbjct: 822 AAGTIFPAIFTFGDSALDVGNNNNRFTMFKANYLPYGRDFINHKPTGRFCNGKLVSDIT 880

BLAST of CaUC09G157990 vs. NCBI nr
Match: XP_016902841.1 (PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g05700 isoform X2 [Cucumis melo])

HSP 1 Score: 118.6 bits (296), Expect = 2.5e-23
Identity = 54/59 (91.53%), Postives = 56/59 (94.92%), Query Frame = 0

Query: 11  AAATIFPAILTFGDSAVDVGNNNNRLSMFKANYLPYGRDFINHKPTGRFCNGKLVSDIT 70
           AA TIFPAI TFGDSA+DVGNNNNR +MFKANYLPYGRDFINHKPTGRFCNGKLVSDIT
Sbjct: 827 AAGTIFPAIFTFGDSALDVGNNNNRFTMFKANYLPYGRDFINHKPTGRFCNGKLVSDIT 885

BLAST of CaUC09G157990 vs. ExPASy Swiss-Prot
Match: Q9LU14 (GDSL esterase/lipase APG OS=Arabidopsis thaliana OX=3702 GN=APG PE=2 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 9.7e-18
Identity = 40/57 (70.18%), Postives = 47/57 (82.46%), Query Frame = 0

Query: 13 ATIFPAILTFGDSAVDVGNNNNRLSMFKANYLPYGRDFINHKPTGRFCNGKLVSDIT 70
          A + PAI+TFGDS VDVGNNN   ++F+A+Y PYGRDF NHK TGRFCNGKL +DIT
Sbjct: 25 AQLVPAIMTFGDSVVDVGNNNYLPTLFRADYPPYGRDFANHKATGRFCNGKLATDIT 81

BLAST of CaUC09G157990 vs. ExPASy Swiss-Prot
Match: Q0WPI9 (GDSL esterase/lipase At3g53100 OS=Arabidopsis thaliana OX=3702 GN=At3g53100 PE=2 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 6.3e-17
Identity = 37/60 (61.67%), Postives = 48/60 (80.00%), Query Frame = 0

Query: 10 EAAATIFPAILTFGDSAVDVGNNNNRLSMFKANYLPYGRDFINHKPTGRFCNGKLVSDIT 69
          ++   + PA++ FGDS VDVGNNNN LS+ K+N+LPYGRDFI+ +PTGRFCNGKL  D +
Sbjct: 21 KSKGAVVPALIMFGDSIVDVGNNNNLLSIVKSNFLPYGRDFIDQRPTGRFCNGKLAVDFS 80

BLAST of CaUC09G157990 vs. ExPASy Swiss-Prot
Match: Q9FFC6 (GDSL esterase/lipase At5g22810 OS=Arabidopsis thaliana OX=3702 GN=At5g22810 PE=3 SV=3)

HSP 1 Score: 84.3 bits (207), Expect = 7.0e-16
Identity = 41/71 (57.75%), Postives = 49/71 (69.01%), Query Frame = 0

Query: 9  VEAAATIFPAILTFGDSAVDVGNNNNRLSMFKANYLPYGRDFINHKPTGRFCNGKLVSDI 68
          V  A  + PAI  FGDS VDVGNNN+  ++ KAN+ PYGRDF  H PTGRFCNGKL +D 
Sbjct: 28 VMKAQPLVPAIFIFGDSVVDVGNNNDIYTIVKANFPPYGRDFTTHTPTGRFCNGKLATDF 87

Query: 69 TG-NIHPKTSP 79
          T  N+  K+ P
Sbjct: 88 TAENLGFKSYP 98

BLAST of CaUC09G157990 vs. ExPASy Swiss-Prot
Match: Q9FFN0 (GDSL esterase/lipase At5g03810 OS=Arabidopsis thaliana OX=3702 GN=At5g03810 PE=3 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 1.3e-14
Identity = 34/61 (55.74%), Postives = 44/61 (72.13%), Query Frame = 0

Query: 9  VEAAATIFPAILTFGDSAVDVGNNNNRLSMFKANYLPYGRDFINHKPTGRFCNGKLVSDI 68
          V    T+ PA++  GDS VD GNNN+R+++ KAN+ PYGRDF+ H  TGRF NGKL +D 
Sbjct: 21 VGTGETLVPALIIMGDSVVDAGNNNHRITLVKANFPPYGRDFVAHSATGRFSNGKLATDF 80

Query: 69 T 70
          T
Sbjct: 81 T 81

BLAST of CaUC09G157990 vs. ExPASy Swiss-Prot
Match: Q9FNP2 (GDSL esterase/lipase At5g08460 OS=Arabidopsis thaliana OX=3702 GN=At5g08460 PE=2 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 1.9e-13
Identity = 35/69 (50.72%), Postives = 45/69 (65.22%), Query Frame = 0

Query: 4   AGGGAVEAAATIFPAILTFGDSAVDVGNNNNRLSMFKANYLPYGRDFINHKPTGRFCNGK 63
           AGG        +FPA+  FGDS VD GNNN+  S+ ++NYLPYG DF  ++PTGRF NGK
Sbjct: 35  AGGEDSSETTAMFPAMFVFGDSLVDNGNNNHLNSLARSNYLPYGIDFAGNQPTGRFSNGK 94

Query: 64  LVSDITGNI 73
            + D  G +
Sbjct: 95  TIVDFIGEL 103

BLAST of CaUC09G157990 vs. ExPASy TrEMBL
Match: A0A6J1KN67 (putative leucine-rich repeat receptor-like protein kinase At2g19210 OS=Cucurbita maxima OX=3661 GN=LOC111494885 PE=3 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 9.4e-24
Identity = 55/62 (88.71%), Postives = 58/62 (93.55%), Query Frame = 0

Query: 8    AVEAAATIFPAILTFGDSAVDVGNNNNRLSMFKANYLPYGRDFINHKPTGRFCNGKLVSD 67
            A  AAATIFPAILTFGDSA+DVGNNNNR ++FKANY PYGRDFINHKPTGRFCNGKLVSD
Sbjct: 943  AASAAATIFPAILTFGDSALDVGNNNNRFTLFKANYHPYGRDFINHKPTGRFCNGKLVSD 1002

Query: 68   IT 70
            IT
Sbjct: 1003 IT 1004

BLAST of CaUC09G157990 vs. ExPASy TrEMBL
Match: A0A1S4E3N3 (probable LRR receptor-like serine/threonine-protein kinase At1g05700 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500771 PE=3 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.2e-23
Identity = 54/59 (91.53%), Postives = 56/59 (94.92%), Query Frame = 0

Query: 11  AAATIFPAILTFGDSAVDVGNNNNRLSMFKANYLPYGRDFINHKPTGRFCNGKLVSDIT 70
           AA TIFPAI TFGDSA+DVGNNNNR +MFKANYLPYGRDFINHKPTGRFCNGKLVSDIT
Sbjct: 827 AAGTIFPAIFTFGDSALDVGNNNNRFTMFKANYLPYGRDFINHKPTGRFCNGKLVSDIT 885

BLAST of CaUC09G157990 vs. ExPASy TrEMBL
Match: A0A1S4E3P2 (probable LRR receptor-like serine/threonine-protein kinase At1g05700 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103500771 PE=3 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.2e-23
Identity = 54/59 (91.53%), Postives = 56/59 (94.92%), Query Frame = 0

Query: 11  AAATIFPAILTFGDSAVDVGNNNNRLSMFKANYLPYGRDFINHKPTGRFCNGKLVSDIT 70
           AA TIFPAI TFGDSA+DVGNNNNR +MFKANYLPYGRDFINHKPTGRFCNGKLVSDIT
Sbjct: 822 AAGTIFPAIFTFGDSALDVGNNNNRFTMFKANYLPYGRDFINHKPTGRFCNGKLVSDIT 880

BLAST of CaUC09G157990 vs. ExPASy TrEMBL
Match: A0A1S4E3N9 (GDSL esterase/lipase APG isoform X4 OS=Cucumis melo OX=3656 GN=LOC103500771 PE=3 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.2e-23
Identity = 54/59 (91.53%), Postives = 56/59 (94.92%), Query Frame = 0

Query: 11  AAATIFPAILTFGDSAVDVGNNNNRLSMFKANYLPYGRDFINHKPTGRFCNGKLVSDIT 70
           AA TIFPAI TFGDSA+DVGNNNNR +MFKANYLPYGRDFINHKPTGRFCNGKLVSDIT
Sbjct: 63  AAGTIFPAIFTFGDSALDVGNNNNRFTMFKANYLPYGRDFINHKPTGRFCNGKLVSDIT 121

BLAST of CaUC09G157990 vs. ExPASy TrEMBL
Match: A0A1S3CIE5 (probable LRR receptor-like serine/threonine-protein kinase At1g05700 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500771 PE=3 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.2e-23
Identity = 54/59 (91.53%), Postives = 56/59 (94.92%), Query Frame = 0

Query: 11  AAATIFPAILTFGDSAVDVGNNNNRLSMFKANYLPYGRDFINHKPTGRFCNGKLVSDIT 70
           AA TIFPAI TFGDSA+DVGNNNNR +MFKANYLPYGRDFINHKPTGRFCNGKLVSDIT
Sbjct: 837 AAGTIFPAIFTFGDSALDVGNNNNRFTMFKANYLPYGRDFINHKPTGRFCNGKLVSDIT 895

BLAST of CaUC09G157990 vs. TAIR 10
Match: AT3G16370.1 (GDSL-like Lipase/Acylhydrolase superfamily protein )

HSP 1 Score: 90.5 bits (223), Expect = 6.9e-19
Identity = 40/57 (70.18%), Postives = 47/57 (82.46%), Query Frame = 0

Query: 13 ATIFPAILTFGDSAVDVGNNNNRLSMFKANYLPYGRDFINHKPTGRFCNGKLVSDIT 70
          A + PAI+TFGDS VDVGNNN   ++F+A+Y PYGRDF NHK TGRFCNGKL +DIT
Sbjct: 25 AQLVPAIMTFGDSVVDVGNNNYLPTLFRADYPPYGRDFANHKATGRFCNGKLATDIT 81

BLAST of CaUC09G157990 vs. TAIR 10
Match: AT3G53100.1 (GDSL-like Lipase/Acylhydrolase superfamily protein )

HSP 1 Score: 87.8 bits (216), Expect = 4.5e-18
Identity = 37/60 (61.67%), Postives = 48/60 (80.00%), Query Frame = 0

Query: 10 EAAATIFPAILTFGDSAVDVGNNNNRLSMFKANYLPYGRDFINHKPTGRFCNGKLVSDIT 69
          ++   + PA++ FGDS VDVGNNNN LS+ K+N+LPYGRDFI+ +PTGRFCNGKL  D +
Sbjct: 21 KSKGAVVPALIMFGDSIVDVGNNNNLLSIVKSNFLPYGRDFIDQRPTGRFCNGKLAVDFS 80

BLAST of CaUC09G157990 vs. TAIR 10
Match: AT5G22810.1 (GDSL-like Lipase/Acylhydrolase superfamily protein )

HSP 1 Score: 84.3 bits (207), Expect = 5.0e-17
Identity = 41/71 (57.75%), Postives = 49/71 (69.01%), Query Frame = 0

Query: 9  VEAAATIFPAILTFGDSAVDVGNNNNRLSMFKANYLPYGRDFINHKPTGRFCNGKLVSDI 68
          V  A  + PAI  FGDS VDVGNNN+  ++ KAN+ PYGRDF  H PTGRFCNGKL +D 
Sbjct: 3  VMKAQPLVPAIFIFGDSVVDVGNNNDIYTIVKANFPPYGRDFTTHTPTGRFCNGKLATDF 62

Query: 69 TG-NIHPKTSP 79
          T  N+  K+ P
Sbjct: 63 TAENLGFKSYP 73

BLAST of CaUC09G157990 vs. TAIR 10
Match: AT5G03810.1 (GDSL-like Lipase/Acylhydrolase family protein )

HSP 1 Score: 80.1 bits (196), Expect = 9.3e-16
Identity = 34/61 (55.74%), Postives = 44/61 (72.13%), Query Frame = 0

Query: 9  VEAAATIFPAILTFGDSAVDVGNNNNRLSMFKANYLPYGRDFINHKPTGRFCNGKLVSDI 68
          V    T+ PA++  GDS VD GNNN+R+++ KAN+ PYGRDF+ H  TGRF NGKL +D 
Sbjct: 21 VGTGETLVPALIIMGDSVVDAGNNNHRITLVKANFPPYGRDFVAHSATGRFSNGKLATDF 80

Query: 69 T 70
          T
Sbjct: 81 T 81

BLAST of CaUC09G157990 vs. TAIR 10
Match: AT5G08460.1 (GDSL-like Lipase/Acylhydrolase superfamily protein )

HSP 1 Score: 76.3 bits (186), Expect = 1.3e-14
Identity = 35/69 (50.72%), Postives = 45/69 (65.22%), Query Frame = 0

Query: 4   AGGGAVEAAATIFPAILTFGDSAVDVGNNNNRLSMFKANYLPYGRDFINHKPTGRFCNGK 63
           AGG        +FPA+  FGDS VD GNNN+  S+ ++NYLPYG DF  ++PTGRF NGK
Sbjct: 35  AGGEDSSETTAMFPAMFVFGDSLVDNGNNNHLNSLARSNYLPYGIDFAGNQPTGRFSNGK 94

Query: 64  LVSDITGNI 73
            + D  G +
Sbjct: 95  TIVDFIGEL 103

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038898692.11.9e-2387.10GDSL esterase/lipase APG-like isoform X1 [Benincasa hispida][more]
XP_038898693.11.9e-2387.10GDSL esterase/lipase APG-like isoform X2 [Benincasa hispida][more]
XP_023000638.11.9e-2388.71putative leucine-rich repeat receptor-like protein kinase At2g19210 [Cucurbita m... [more]
XP_016902842.12.5e-2391.53PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g05700 ... [more]
XP_016902841.12.5e-2391.53PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g05700 ... [more]
Match NameE-valueIdentityDescription
Q9LU149.7e-1870.18GDSL esterase/lipase APG OS=Arabidopsis thaliana OX=3702 GN=APG PE=2 SV=1[more]
Q0WPI96.3e-1761.67GDSL esterase/lipase At3g53100 OS=Arabidopsis thaliana OX=3702 GN=At3g53100 PE=2... [more]
Q9FFC67.0e-1657.75GDSL esterase/lipase At5g22810 OS=Arabidopsis thaliana OX=3702 GN=At5g22810 PE=3... [more]
Q9FFN01.3e-1455.74GDSL esterase/lipase At5g03810 OS=Arabidopsis thaliana OX=3702 GN=At5g03810 PE=3... [more]
Q9FNP21.9e-1350.72GDSL esterase/lipase At5g08460 OS=Arabidopsis thaliana OX=3702 GN=At5g08460 PE=2... [more]
Match NameE-valueIdentityDescription
A0A6J1KN679.4e-2488.71putative leucine-rich repeat receptor-like protein kinase At2g19210 OS=Cucurbita... [more]
A0A1S4E3N31.2e-2391.53probable LRR receptor-like serine/threonine-protein kinase At1g05700 isoform X2 ... [more]
A0A1S4E3P21.2e-2391.53probable LRR receptor-like serine/threonine-protein kinase At1g05700 isoform X3 ... [more]
A0A1S4E3N91.2e-2391.53GDSL esterase/lipase APG isoform X4 OS=Cucumis melo OX=3656 GN=LOC103500771 PE=3... [more]
A0A1S3CIE51.2e-2391.53probable LRR receptor-like serine/threonine-protein kinase At1g05700 isoform X1 ... [more]
Match NameE-valueIdentityDescription
AT3G16370.16.9e-1970.18GDSL-like Lipase/Acylhydrolase superfamily protein [more]
AT3G53100.14.5e-1861.67GDSL-like Lipase/Acylhydrolase superfamily protein [more]
AT5G22810.15.0e-1757.75GDSL-like Lipase/Acylhydrolase superfamily protein [more]
AT5G03810.19.3e-1655.74GDSL-like Lipase/Acylhydrolase family protein [more]
AT5G08460.11.3e-1450.72GDSL-like Lipase/Acylhydrolase superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001087GDSL lipase/esterasePFAMPF00657Lipase_GDSLcoord: 19..69
e-value: 7.3E-6
score: 26.6
IPR036514SGNH hydrolase superfamilyGENE3D3.40.50.1110SGNH hydrolasecoord: 7..83
e-value: 1.1E-9
score: 40.1
NoneNo IPR availablePANTHERPTHR45642:SF35GDSL ESTERASE/LIPASE APGcoord: 11..71
NoneNo IPR availablePANTHERPTHR45642GDSL ESTERASE/LIPASE EXL3coord: 11..71

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC09G157990.1CaUC09G157990.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006468 protein phosphorylation
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005524 ATP binding
molecular_function GO:0016788 hydrolase activity, acting on ester bonds
molecular_function GO:0004674 protein serine/threonine kinase activity