CaUC08G156210 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC08G156210
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionProtein TIC 214
LocationCiama_Chr08: 27641784 .. 27645310 (-)
RNA-Seq ExpressionCaUC08G156210
SyntenyCaUC08G156210
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAGTTCAAAAAATCATATAATAATCCAAAAATTGCAATAGAAAAGAAAAAGTGAGGTTTGTGATGATTTTAAAAATATTTTATACTAGGTGATCTAGTATCCTTACGCATGAAGATAATCGACTCGGTCGTTGTGGTTAGACTCTATTATGGATTTCTGACCACATTCTCCAAAGGGCACTCTTATCTCTTCCTCTCCAAGCTCGGGAGGACAATAAGAGGAAATTTTATAGTACTACCTTTTCAATTTATTGCAAGTCATTAATGCCACATCCAATAACATTTATGAATGCAAATTATAGTATGAACGAGAGGAGTTGAATGCCAAATTTTCCAAACTCGAAAAGAAAAGTTACGTGGTGTGTACATAACTGGAAAATTTCATTATTGGGTGCTTTGGGTTACCTATAATTTGTGCTTTTGGGTATGTTTAGGGAGTGAGACTTTCTGGAAGTTAGTTAGCCTAAGTGCCAAACCATTTGTTTTCTTATACAAATGATATTAAAGCTCTTTGTCACTCTTTCCTTTGTCGTGATATTGTTGAGATTGTTTCTTTTTTTTACCACTAGCCCTATCTAGGATGATTTTTCCTTTATATTATATATAAATATTTCTTTAAGAAAACACAAGATTTCGTTTTTTTTTTTTTTTTTTTTCACTGGCAATAACCCTCAAATAAATTTTGACCATGACTGCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGTTTTTGAAGTTTTAATGGATGCAGGTAGGTGAGAATGAGAAGCTGGAGAGGAAGAAAATAGATGACACATTTGAAGAGTGGAAGTCTAAGAAGTTTTCTTTGACTGTTCCTTTGAGTGTCATCACTTATTCTAACCAAAGTAGAAGGCTGTCATAAAACTTCATAAAAATTAATCAATGATATTCATCAACAGATCAGCTCTTGTATACTTATGCTTAATATTGCCAGTTGCACACATATCTTCTACTTTGGTGCAAATACAAGGTATCTGTTTAGTTGATCATGTTAAAATTGGTTTTTTTTTTTTTTTTTTTTCACTGGCAATAACCCTCAAATAAATTTTGACCATGACTGCATCTTCAAAACATACGAACAAAAAAAGGAGTAAACGATTTTGTTGAACACATGCATATGTATAGGGTATCGTTTTGTGCATAAAGGGGAAATTCAATAATAAGGAGAGATTTTCAGAATATGAATGAATCCCCTAAGGGACTTCCCCATCGTTCAAGTAGTGGATCTCAATAAATTGCTATTAGAGGGTTATTGCCGGAACTTCTAATGAAACACAAAATAATGTGACGGATTTCAACAGCACCTTGTTCATGCAAAGGCCGCCATTGATTTTGGAAGAGGGGAGTGCTTTTGGGTCATCATGTTACTTCTTAATGGGCTCTGCCTATGAGTCCAAAAGGCCCAAGATGCTTTAAACAATTTTTAGATTTTCTTGAGAAAATCAATTTTGATCTAACCTTATCAATAACATTTTTCTTGGTGAAGTTGATGTGGGGCATGATGTGTAAATTTTATGGTATTTCCTGTTCTGCCCTTCAATTAATCTAAGCTATTTTTTTCACCATTCATCTACTTGGCAACAAATTTAAGGCATCTGTGTAGTTGATCATGAATACTGCTTGTTAAATGCTTTTTAGGCAGATTTTTCGTGCGGAAAATTTCAAGTTCAAGATTAAAAAATACTTGAATTTTTAATACCTAATAGAATTTGATTGCATTTTTGTGCCCAAAGAATAGAAAATATTAAGTTCTTAAATAGTTAATGGAATCTTTTTTTGTTATGATTTGAATTCTAGATATGGTATTTTTGGATTAATGAGCTTCTGGTGGTTATGAGATAATTTATAATTAGTAAGTAATCAATAATCCATTTTGCTATATTTCTAATTTTGAAACATTTTTACCTTATTTCAAAATTGCTATTTTTCTAATTTTGAAACATCTTTCCCATATTTCAAAATGTCTTTCAGAATGAATGTTTAAATTTGCTATTCTTTTCATAGCCCATTAAATTACTATAAAAATGAGATGAGTGTTACAATGCTAACACTTAAGTTTTAGAAGTGTACAATTTTAACTTCCGAATAAATTCATGCTCCAAACATATTTAAAGTTTATAAATATATCAATGAAATACCTAGCATCTTCTTTAAGAGAAATATCTATCCATTTTTAAGTTCAAACTTTCAATTCAGTCCGTATATATCGGCAAAAGACCCATCAACGCCATTAATCATAAGACTCCAAACCTGTCAAAACTGTCAGAATTTTGTTGAGAAGATTGAATCTTTGGCCACTTCTACTCAACATAGTTATTCTTCTTCTAGCTGTAAAGTAGTAAGAATCCCTTGTATTATTCTTCTTCTAGCTCTGAAGAAGTAGTAAGGATTCCTTGTATTATTCTGGACTCTTTCTCCTCAGTCTTTAAGAAGGAGAGTTGTGGTTGTGGTTAGTTTTTTAATGAATTTTCTTTCTTAAGAAAAAACCCATCAATATATAAATTTTTTTAGATTTCTATTGAGGGAATTCAAAGAGGTTTTCCTTCCTAGGAACTTTCAAACCATTCAAAATGCTCATACAATTGACTGAGCTAGCACTAAATTTTCAAGTTAGTATCAAAATTTCAATGGTATGAATGTATTAACAAAACATCCATATTAAAATTGAGTGATAATTTAATTAGTAATTTTATTTTTCCTGCACAACTAAGTTATTAATCCAACTATTATTATCTTTATTAATATTGATAGATACTTTCAAATTGTGCATTTATTAAAAAAAAAAATTAGCCCCCTTAAGATTGTTATCGAAGGCTTCAATTTCATATTATATCATCGTATGTACGGTTTGAATCCTTGTTCACAACCGTTTTCTTTTTTTGCTTTTTTGTTCAATTCCTTTTCAAGTGTTAGAAACAAATAACAGATAAAAAATCCAATTCATACTTCTGCCCAAGTTTTCTAGAACAAACGACCTGAGTGCACGCAAAAGCTTCGGCCTAAGCTATGTTTTCTATTTATCAAAATTTTGGAGCAACTCTACTTTAGTTTTGGCCTTCCGATATTACATTACATTAAAAAATCTCGAACTCTTTACCCTTAAATTCGAACCATTTTCATGAGAACACAAAACTTATTCTGTTCCTAAAAAATCAAAGAGGATATTCATTTTATCAGTTTGAAGTTTAGAAATGTGACGCTCATCAGTGATACAGAAATTTGGTGGTGTGCGTAA

mRNA sequence

ATGGAAAGTGATCTAGTATCCTTACGCATGAAGATAATCGACTCGGTCGTTGTGGTTAGACTCTATTATGGATTTCTGACCACATTCTCCAAAGGGCACTCTTATCTCTTCCTCTCCAAGCTCGGGAGGACAATAAGAGGAAATTTTATATATGAACGAGAGGAGTTGAATGCCAAATTTTCCAAACTCGAAAAGAAAAGTTACGTGGTAGGTGAGAATGAGAAGCTGGAGAGGAAGAAAATAGATGACACATTTGAAGAGTGGAAGTCTAAGAAAAATGTGACGCTCATCAGTGATACAGAAATTTGGTGGTGTGCGTAA

Coding sequence (CDS)

ATGGAAAGTGATCTAGTATCCTTACGCATGAAGATAATCGACTCGGTCGTTGTGGTTAGACTCTATTATGGATTTCTGACCACATTCTCCAAAGGGCACTCTTATCTCTTCCTCTCCAAGCTCGGGAGGACAATAAGAGGAAATTTTATATATGAACGAGAGGAGTTGAATGCCAAATTTTCCAAACTCGAAAAGAAAAGTTACGTGGTAGGTGAGAATGAGAAGCTGGAGAGGAAGAAAATAGATGACACATTTGAAGAGTGGAAGTCTAAGAAAAATGTGACGCTCATCAGTGATACAGAAATTTGGTGGTGTGCGTAA

Protein sequence

MESDLVSLRMKIIDSVVVVRLYYGFLTTFSKGHSYLFLSKLGRTIRGNFIYEREELNAKFSKLEKKSYVVGENEKLERKKIDDTFEEWKSKKNVTLISDTEIWWCA
Homology
[Close]
BLAST of CaUC08G156210 vs. NCBI nr
Match: KAF4355161.1 (hypothetical protein G4B88_018051 [Cannabis sativa] >KAF4390283.1 hypothetical protein F8388_019938 [Cannabis sativa])

HSP 1 Score: 58.5 bits (140), Expect = 3.9e-05
Identity = 32/38 (84.21%), Postives = 34/38 (89.47%), Query Frame = 0 

Query: 1  MESDLVSLRMKIIDSVVVVRLYYGFLTTFSKGHSYLFL 39
          MES+LVSL MKII+SVVVV LYYGFLTTFS G SYLFL
Sbjct: 1  MESNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFL 38

[Close]
BLAST of CaUC08G156210 vs. NCBI nr
Match: BBN69988.1 (hypothetical protein Prudu_1320S000100 [Prunus dulcis])

HSP 1 Score: 58.2 bits (139), Expect = 5.1e-05
Identity = 36/55 (65.45%), Postives = 40/55 (72.73%), Query Frame = 0 

Query: 1  MESDLVSLRMKIIDSVVVVRLYYGFLTTFSKGHSYLFLSKLGRTIRGNFIYEREE 56
          MES+LVSL MKII+SVVVV LYYGFLTTFS G SYLFL      +R   + E EE
Sbjct: 1  MESNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFL------LRARVMEEGEE 49

[Close]
BLAST of CaUC08G156210 vs. NCBI nr
Match: YP_009993634.1 (hypothetical chloroplast RF19 [Gonystylus affinis] >YP_009993655.1 hypothetical chloroplast RF19 [Gonystylus affinis] >QNO35384.1 hypothetical chloroplast RF19 [Gonystylus affinis] >QNO35405.1 hypothetical chloroplast RF19 [Gonystylus affinis])

HSP 1 Score: 58.2 bits (139), Expect = 5.1e-05
Identity = 36/56 (64.29%), Postives = 40/56 (71.43%), Query Frame = 0 

Query: 4  DLVSLRMKIIDSVVVVRLYYGFLTTFSKGHSYLFLSKLGRTIRGNFIYEREELNAK 60
          DL+SL MKII+SVVVV LYYGFLTTFS G SYLFL + G      F+ E EE N K
Sbjct: 10 DLISLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLQAG------FMEEGEEGNEK 59

[Close]
BLAST of CaUC08G156210 vs. NCBI nr
Match: BBN67934.1 (hypothetical protein Prudu_229S000400 [Prunus dulcis])

HSP 1 Score: 58.2 bits (139), Expect = 5.1e-05
Identity = 36/55 (65.45%), Postives = 40/55 (72.73%), Query Frame = 0 

Query: 1  MESDLVSLRMKIIDSVVVVRLYYGFLTTFSKGHSYLFLSKLGRTIRGNFIYEREE 56
          MES+LVSL MKII+SVVVV LYYGFLTTFS G SYLFL      +R   + E EE
Sbjct: 1  MESNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFL------LRARVMEEGEE 49

[Close]
BLAST of CaUC08G156210 vs. NCBI nr
Match: BBN69961.1 (hypothetical protein Prudu_1292S000200 [Prunus dulcis] >BBN70000.1 hypothetical protein Prudu_1327S000100 [Prunus dulcis])

HSP 1 Score: 58.2 bits (139), Expect = 5.1e-05
Identity = 36/55 (65.45%), Postives = 40/55 (72.73%), Query Frame = 0 

Query: 1  MESDLVSLRMKIIDSVVVVRLYYGFLTTFSKGHSYLFLSKLGRTIRGNFIYEREE 56
          MES+LVSL MKII+SVVVV LYYGFLTTFS G SYLFL      +R   + E EE
Sbjct: 1  MESNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFL------LRARVMEEGEE 49

[Close]
BLAST of CaUC08G156210 vs. ExPASy Swiss-Prot
Match: Q14FA0 (Protein TIC 214 OS=Populus alba OX=43335 GN=TIC214 PE=3 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 7.5e-07
Identity = 34/52 (65.38%), Postives = 37/52 (71.15%), Query Frame = 0 

Query: 4  DLVSLRMKIIDSVVVVRLYYGFLTTFSKGHSYLFLSKLGRTIRGNFIYEREE 56
          +LVSL MKII+SVVVV LYYGFLTTFS G SYLFL      +R   I E EE
Sbjct: 10 NLVSLCMKIINSVVVVGLYYGFLTTFSMGPSYLFL------LRARVIEEGEE 55

[Close]
BLAST of CaUC08G156210 vs. ExPASy Swiss-Prot
Match: A4GYX4 (Protein TIC 214 OS=Populus trichocarpa OX=3694 GN=TIC214 PE=3 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 7.5e-07
Identity = 34/52 (65.38%), Postives = 37/52 (71.15%), Query Frame = 0 

Query: 4  DLVSLRMKIIDSVVVVRLYYGFLTTFSKGHSYLFLSKLGRTIRGNFIYEREE 56
          +LVSL MKII+SVVVV LYYGFLTTFS G SYLFL      +R   I E EE
Sbjct: 10 NLVSLCMKIINSVVVVGLYYGFLTTFSMGPSYLFL------LRARVIEEGEE 55

[Close]
BLAST of CaUC08G156210 vs. ExPASy Swiss-Prot
Match: Q1KXH4 (Protein TIC 214 OS=Lactuca sativa OX=4236 GN=TIC214 PE=3 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 1.7e-06
Identity = 33/52 (63.46%), Postives = 38/52 (73.08%), Query Frame = 0 

Query: 4  DLVSLRMKIIDSVVVVRLYYGFLTTFSKGHSYLFLSKLGRTIRGNFIYEREE 56
          +LVSL MKII+SVVVV LYYGFLTTFS G SYLFL      +R + + E EE
Sbjct: 10 NLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFL------LRAHIMEEGEE 55

[Close]
BLAST of CaUC08G156210 vs. ExPASy Swiss-Prot
Match: Q1KXR1 (Protein TIC 214 OS=Helianthus annuus OX=4232 GN=TIC214 PE=3 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 2.2e-06
Identity = 33/52 (63.46%), Postives = 38/52 (73.08%), Query Frame = 0 

Query: 4  DLVSLRMKIIDSVVVVRLYYGFLTTFSKGHSYLFLSKLGRTIRGNFIYEREE 56
          +LVSL MKII+SVVVV LYYGFLTTFS G SYLFL      +R + + E EE
Sbjct: 10 NLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFL------LRAHVMEEGEE 55

[Close]
BLAST of CaUC08G156210 vs. ExPASy Swiss-Prot
Match: A4QJH4 (Protein TIC 214 OS=Aethionema cordifolium OX=434059 GN=TIC214 PE=3 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 2.8e-06
Identity = 29/35 (82.86%), Postives = 31/35 (88.57%), Query Frame = 0 

Query: 4  DLVSLRMKIIDSVVVVRLYYGFLTTFSKGHSYLFL 39
          +LVSL MKII+SVVVV LYYGFLTTFS G SYLFL
Sbjct: 11 NLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFL 45

[Close]
BLAST of CaUC08G156210 vs. ExPASy TrEMBL
Match: A0A7J6H4X8 (DNA-directed RNA polymerase OS=Cannabis sativa OX=3483 GN=F8388_019938 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.9e-05
Identity = 32/38 (84.21%), Postives = 34/38 (89.47%), Query Frame = 0 

Query: 1  MESDLVSLRMKIIDSVVVVRLYYGFLTTFSKGHSYLFL 39
          MES+LVSL MKII+SVVVV LYYGFLTTFS G SYLFL
Sbjct: 1  MESNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFL 38

[Close]
BLAST of CaUC08G156210 vs. ExPASy TrEMBL
Match: A0A5H2Y3H5 (Uncharacterized protein OS=Prunus dulcis OX=3755 GN=Prudu_1292S000200 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 2.5e-05
Identity = 36/55 (65.45%), Postives = 40/55 (72.73%), Query Frame = 0 

Query: 1  MESDLVSLRMKIIDSVVVVRLYYGFLTTFSKGHSYLFLSKLGRTIRGNFIYEREE 56
          MES+LVSL MKII+SVVVV LYYGFLTTFS G SYLFL      +R   + E EE
Sbjct: 1  MESNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFL------LRARVMEEGEE 49

[Close]
BLAST of CaUC08G156210 vs. ExPASy TrEMBL
Match: A0A7G9XJ47 (Protein TIC 214 OS=Gonystylus affinis OX=1853235 GN=ycf1 PE=3 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 2.5e-05
Identity = 36/56 (64.29%), Postives = 40/56 (71.43%), Query Frame = 0 

Query: 4  DLVSLRMKIIDSVVVVRLYYGFLTTFSKGHSYLFLSKLGRTIRGNFIYEREELNAK 60
          DL+SL MKII+SVVVV LYYGFLTTFS G SYLFL + G      F+ E EE N K
Sbjct: 10 DLISLCMKIINSVVVVGLYYGFLTTFSIGPSYLFLLQAG------FMEEGEEGNEK 59

[Close]
BLAST of CaUC08G156210 vs. ExPASy TrEMBL
Match: A0A5H2XPX5 (Uncharacterized protein OS=Prunus dulcis OX=3755 GN=Prudu_1320S000100 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 2.5e-05
Identity = 36/55 (65.45%), Postives = 40/55 (72.73%), Query Frame = 0 

Query: 1  MESDLVSLRMKIIDSVVVVRLYYGFLTTFSKGHSYLFLSKLGRTIRGNFIYEREE 56
          MES+LVSL MKII+SVVVV LYYGFLTTFS G SYLFL      +R   + E EE
Sbjct: 1  MESNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFL------LRARVMEEGEE 49

[Close]
BLAST of CaUC08G156210 vs. ExPASy TrEMBL
Match: A0A5H2XL23 (Uncharacterized protein OS=Prunus dulcis OX=3755 GN=Prudu_229S000400 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 2.5e-05
Identity = 36/55 (65.45%), Postives = 40/55 (72.73%), Query Frame = 0 

Query: 1  MESDLVSLRMKIIDSVVVVRLYYGFLTTFSKGHSYLFLSKLGRTIRGNFIYEREE 56
          MES+LVSL MKII+SVVVV LYYGFLTTFS G SYLFL      +R   + E EE
Sbjct: 1  MESNLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFL------LRARVMEEGEE 49

[Close]
BLAST of CaUC08G156210 vs. TAIR 10
Match: ATCG01130.1 (Ycf1 protein )

HSP 1 Score: 52.8 bits (125), Expect = 2.0e-07
Identity = 29/35 (82.86%), Postives = 31/35 (88.57%), Query Frame = 0 

Query: 4  DLVSLRMKIIDSVVVVRLYYGFLTTFSKGHSYLFL 39
          +LVSL MKII+SVVVV LYYGFLTTFS G SYLFL
Sbjct: 11 NLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFL 45

[Close]
BLAST of CaUC08G156210 vs. TAIR 10
Match: ATCG01000.1 (Ycf1 protein )

HSP 1 Score: 52.8 bits (125), Expect = 2.0e-07
Identity = 29/35 (82.86%), Postives = 31/35 (88.57%), Query Frame = 0 

Query: 4  DLVSLRMKIIDSVVVVRLYYGFLTTFSKGHSYLFL 39
          +LVSL MKII+SVVVV LYYGFLTTFS G SYLFL
Sbjct: 11 NLVSLCMKIINSVVVVGLYYGFLTTFSIGPSYLFL 45

[Close]
BLAST of CaUC08G156210 vs. TAIR 10
Match: ATMG00370.1 (Ycf1 protein )

HSP 1 Score: 50.4 bits (119), Expect = 1.0e-06
Identity = 28/35 (80.00%), Postives = 30/35 (85.71%), Query Frame = 0 

Query: 4  DLVSLRMKIIDSVVVVRLYYGFLTTFSKGHSYLFL 39
          +LV L MKII+SVVVV LYYGFLTTFS G SYLFL
Sbjct: 10 NLVYLCMKIINSVVVVGLYYGFLTTFSIGPSYLFL 44

[Close]
BLAST of CaUC08G156210 vs. TAIR 10
Match: AT2G07739.1 (Ycf1 protein )

HSP 1 Score: 48.1 bits (113), Expect = 5.0e-06
Identity = 27/35 (77.14%), Postives = 29/35 (82.86%), Query Frame = 0 

Query: 4  DLVSLRMKIIDSVVVVRLYYGFLTTFSKGHSYLFL 39
          +LV L MKII+SVVVV LYYGFLTTFS G  YLFL
Sbjct: 10 NLVYLCMKIINSVVVVGLYYGFLTTFSIGPFYLFL 44

The following BLAST results are available for this feature:
BLAST of CaUC08G156210 vs. NCBI nr
Match NameE-valueIdentityDescription
KAF4355161.13.9e-0584.21hypothetical protein G4B88_018051 [Cannabis sativa] >KAF4390283.1 hypothetical p... [more]
BBN69988.15.1e-0565.45hypothetical protein Prudu_1320S000100 [Prunus dulcis][more]
YP_009993634.15.1e-0564.29hypothetical chloroplast RF19 [Gonystylus affinis] >YP_009993655.1 hypothetical ... [more]
BBN67934.15.1e-0565.45hypothetical protein Prudu_229S000400 [Prunus dulcis][more]
BBN69961.15.1e-0565.45hypothetical protein Prudu_1292S000200 [Prunus dulcis] >BBN70000.1 hypothetical ... [more]
BLAST of CaUC08G156210 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q14FA07.5e-0765.38Protein TIC 214 OS=Populus alba OX=43335 GN=TIC214 PE=3 SV=1[more]
A4GYX47.5e-0765.38Protein TIC 214 OS=Populus trichocarpa OX=3694 GN=TIC214 PE=3 SV=1[more]
Q1KXH41.7e-0663.46Protein TIC 214 OS=Lactuca sativa OX=4236 GN=TIC214 PE=3 SV=1[more]
Q1KXR12.2e-0663.46Protein TIC 214 OS=Helianthus annuus OX=4232 GN=TIC214 PE=3 SV=1[more]
A4QJH42.8e-0682.86Protein TIC 214 OS=Aethionema cordifolium OX=434059 GN=TIC214 PE=3 SV=1[more]
BLAST of CaUC08G156210 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A7J6H4X81.9e-0584.21DNA-directed RNA polymerase OS=Cannabis sativa OX=3483 GN=F8388_019938 PE=4 SV=1[more]
A0A5H2Y3H52.5e-0565.45Uncharacterized protein OS=Prunus dulcis OX=3755 GN=Prudu_1292S000200 PE=4 SV=1[more]
A0A7G9XJ472.5e-0564.29Protein TIC 214 OS=Gonystylus affinis OX=1853235 GN=ycf1 PE=3 SV=1[more]
A0A5H2XPX52.5e-0565.45Uncharacterized protein OS=Prunus dulcis OX=3755 GN=Prudu_1320S000100 PE=4 SV=1[more]
A0A5H2XL232.5e-0565.45Uncharacterized protein OS=Prunus dulcis OX=3755 GN=Prudu_229S000400 PE=4 SV=1[more]
BLAST of CaUC08G156210 vs. TAIR 10
Match NameE-valueIdentityDescription
ATCG01130.12.0e-0782.86Ycf1 protein [more]
ATCG01000.12.0e-0782.86Ycf1 protein [more]
ATMG00370.11.0e-0680.00Ycf1 protein [more]
AT2G07739.15.0e-0677.14Ycf1 protein [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC08G156210.1CaUC08G156210.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015031 protein transport
biological_process GO:0006351 transcription, DNA-templated
cellular_component GO:0009706 chloroplast inner membrane
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003677 DNA binding
molecular_function GO:0003899 DNA-directed 5'-3' RNA polymerase activity
molecular_function GO:0046872 metal ion binding