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CaUC08G156160 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGAACCAAAGAAGCGCAAAATCAAAGCAAATTCATCCGATTCGTTAAACTACCCATCAGAGCTCTAGGCAAGGCCAAGGATTTCTATGTACGAAGCATCATGGATTGTGCTCCCAGAGTCTCTCACGGCTACCCATCTGGCCAATTGCCCATGTTGCCCAAAAGCTACAGCTCTCGCTCTTCCAGATCCAATGAAACCGACGATTTCAGAGAGCTTGTCAAGGCCGCTTCCGTTAAAAGCTTGGACATTAAAGATATCGACGCCGATATTCTTTATCCACGGAGGCTAAGACAGTCCAAGGGACTTCCTAAAAGTTGCAGTGTTGGAATGGGTAGGATTGATGAGGATACTGCTTGTGAATTTGAAGATGGCGTTGAAGATAAGGCTGATTTGGTTTATCCAAGAAGTAAAAGCTACGCTGTGACAAATTCAAAACCTGGGTTTTGA ATGAGAACCAAAGAAGCGCAAAATCAAAGCAAATTCATCCGATTCGTTAAACTACCCATCAGAGCTCTAGGCAAGGCCAAGGATTTCTATGTACGAAGCATCATGGATTGTGCTCCCAGAGTCTCTCACGGCTACCCATCTGGCCAATTGCCCATGTTGCCCAAAAGCTACAGCTCTCGCTCTTCCAGATCCAATGAAACCGACGATTTCAGAGAGCTTGTCAAGGCCGCTTCCGTTAAAAGCTTGGACATTAAAGATATCGACGCCGATATTCTTTATCCACGGAGGCTAAGACAGTCCAAGGGACTTCCTAAAAGTTGCAGTGTTGGAATGGGTAGGATTGATGAGGATACTGCTTGTGAATTTGAAGATGGCGTTGAAGATAAGGCTGATTTGGTTTATCCAAGAAGTAAAAGCTACGCTGTGACAAATTCAAAACCTGGGTTTTGA ATGAGAACCAAAGAAGCGCAAAATCAAAGCAAATTCATCCGATTCGTTAAACTACCCATCAGAGCTCTAGGCAAGGCCAAGGATTTCTATGTACGAAGCATCATGGATTGTGCTCCCAGAGTCTCTCACGGCTACCCATCTGGCCAATTGCCCATGTTGCCCAAAAGCTACAGCTCTCGCTCTTCCAGATCCAATGAAACCGACGATTTCAGAGAGCTTGTCAAGGCCGCTTCCGTTAAAAGCTTGGACATTAAAGATATCGACGCCGATATTCTTTATCCACGGAGGCTAAGACAGTCCAAGGGACTTCCTAAAAGTTGCAGTGTTGGAATGGGTAGGATTGATGAGGATACTGCTTGTGAATTTGAAGATGGCGTTGAAGATAAGGCTGATTTGGTTTATCCAAGAAGTAAAAGCTACGCTGTGACAAATTCAAAACCTGGGTTTTGA MRTKEAQNQSKFIRFVKLPIRALGKAKDFYVRSIMDCAPRVSHGYPSGQLPMLPKSYSSRSSRSNETDDFRELVKAASVKSLDIKDIDADILYPRRLRQSKGLPKSCSVGMGRIDEDTACEFEDGVEDKADLVYPRSKSYAVTNSKPGF Homology
BLAST of CaUC08G156160 vs. NCBI nr
Match: XP_038884662.1 (uncharacterized protein LOC120075388 [Benincasa hispida]) HSP 1 Score: 287.3 bits (734), Expect = 7.3e-74 Identity = 142/149 (95.30%), Postives = 146/149 (97.99%), Query Frame = 0
BLAST of CaUC08G156160 vs. NCBI nr
Match: XP_008444532.1 (PREDICTED: uncharacterized protein LOC103487823 [Cucumis melo]) HSP 1 Score: 278.9 bits (712), Expect = 2.6e-71 Identity = 137/149 (91.95%), Postives = 145/149 (97.32%), Query Frame = 0
BLAST of CaUC08G156160 vs. NCBI nr
Match: XP_011649558.1 (uncharacterized protein LOC105434639 [Cucumis sativus] >KGN62434.1 hypothetical protein Csa_018658 [Cucumis sativus]) HSP 1 Score: 272.3 bits (695), Expect = 2.4e-69 Identity = 134/149 (89.93%), Postives = 141/149 (94.63%), Query Frame = 0
BLAST of CaUC08G156160 vs. NCBI nr
Match: KAA0060962.1 (uncharacterized protein E6C27_scaffold501G00970 [Cucumis melo var. makuwa]) HSP 1 Score: 258.8 bits (660), Expect = 2.8e-65 Identity = 127/137 (92.70%), Postives = 133/137 (97.08%), Query Frame = 0
BLAST of CaUC08G156160 vs. NCBI nr
Match: XP_023002833.1 (uncharacterized protein LOC111496579 [Cucurbita maxima]) HSP 1 Score: 254.2 bits (648), Expect = 6.9e-64 Identity = 123/148 (83.11%), Postives = 139/148 (93.92%), Query Frame = 0
BLAST of CaUC08G156160 vs. ExPASy TrEMBL
Match: A0A1S3BAI0 (uncharacterized protein LOC103487823 OS=Cucumis melo OX=3656 GN=LOC103487823 PE=4 SV=1) HSP 1 Score: 278.9 bits (712), Expect = 1.3e-71 Identity = 137/149 (91.95%), Postives = 145/149 (97.32%), Query Frame = 0
BLAST of CaUC08G156160 vs. ExPASy TrEMBL
Match: A0A0A0LN74 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G354110 PE=4 SV=1) HSP 1 Score: 272.3 bits (695), Expect = 1.2e-69 Identity = 134/149 (89.93%), Postives = 141/149 (94.63%), Query Frame = 0
BLAST of CaUC08G156160 vs. ExPASy TrEMBL
Match: A0A5A7UYI9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00970 PE=4 SV=1) HSP 1 Score: 258.8 bits (660), Expect = 1.4e-65 Identity = 127/137 (92.70%), Postives = 133/137 (97.08%), Query Frame = 0
BLAST of CaUC08G156160 vs. ExPASy TrEMBL
Match: A0A6J1KUQ7 (uncharacterized protein LOC111496579 OS=Cucurbita maxima OX=3661 GN=LOC111496579 PE=4 SV=1) HSP 1 Score: 254.2 bits (648), Expect = 3.3e-64 Identity = 123/148 (83.11%), Postives = 139/148 (93.92%), Query Frame = 0
BLAST of CaUC08G156160 vs. ExPASy TrEMBL
Match: A0A6J1GH58 (uncharacterized protein LOC111454153 OS=Cucurbita moschata OX=3662 GN=LOC111454153 PE=4 SV=1) HSP 1 Score: 251.1 bits (640), Expect = 2.8e-63 Identity = 122/148 (82.43%), Postives = 138/148 (93.24%), Query Frame = 0
BLAST of CaUC08G156160 vs. TAIR 10
Match: AT1G10140.1 (Uncharacterised conserved protein UCP031279 ) HSP 1 Score: 116.3 bits (290), Expect = 2.1e-26 Identity = 76/165 (46.06%), Postives = 97/165 (58.79%), Query Frame = 0
BLAST of CaUC08G156160 vs. TAIR 10
Match: AT1G58420.1 (Uncharacterised conserved protein UCP031279 ) HSP 1 Score: 84.0 bits (206), Expect = 1.1e-16 Identity = 65/174 (37.36%), Postives = 96/174 (55.17%), Query Frame = 0
BLAST of CaUC08G156160 vs. TAIR 10
Match: AT4G37700.1 (unknown protein; Has 64 Blast hits to 64 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 54.3 bits (129), Expect = 9.7e-08 Identity = 46/147 (31.29%), Postives = 79/147 (53.74%), Query Frame = 0
BLAST of CaUC08G156160 vs. TAIR 10
Match: AT5G65925.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G49820.1); Has 45 Blast hits to 45 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 43.5 bits (101), Expect = 1.7e-04 Identity = 42/138 (30.43%), Postives = 64/138 (46.38%), Query Frame = 0
BLAST of CaUC08G156160 vs. TAIR 10
Match: AT3G49820.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G65925.1); Has 23 Blast hits to 23 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 43.1 bits (100), Expect = 2.2e-04 Identity = 34/130 (26.15%), Postives = 55/130 (42.31%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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