CaUC08G155780 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC08G155780
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	F-box protein GID2-like
Location	Ciama_Chr08: 27286575 .. 27286997 (-)
RNA-Seq Expression	CaUC08G155780
Synteny	CaUC08G155780

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAAGAAAATCAAGATAATTATATCAGATTCACACGAACAAGAAACAGAGTCCCAACCACCACCCTCTACGTTTGCAAATTTAGACGACAATCTGTTGTTCGAGGTGTTTAAGCACGTCGATGCAAGAACACTGGCCACGGCGGCCGGAGTCAGCAAGCAGTGGTTCAAAACCGCCCACGACGAGCGCCTCTGGGAGCTGCTCTGCACCAAACACTGGACCAACCTCGGCTGTGCTAATCAACAGCTACGCTCCGTCGTGCTTGCGCTTGGTGGCTTCCGTCGATTACACTCTCTTTACCCATTTCCCCCTATGATTGGATGTAGTCCATGGGGCAAAGACGAGGTTCATCTCTCCCTTTCTCTTCTCTCAATCCGCTACTACGAGAAGATGAAATTCAAAAACAGACCCACATCTTGA

mRNA sequence

ATGAAGAAGAAAATCAAGATAATTATATCAGATTCACACGAACAAGAAACAGAGTCCCAACCACCACCCTCTACGTTTGCAAATTTAGACGACAATCTGTTGTTCGAGGTGTTTAAGCACGTCGATGCAAGAACACTGGCCACGGCGGCCGGAGTCAGCAAGCAGTGGTTCAAAACCGCCCACGACGAGCGCCTCTGGGAGCTGCTCTGCACCAAACACTGGACCAACCTCGGCTGTGCTAATCAACAGCTACGCTCCGTCGTGCTTGCGCTTGGTGGCTTCCGTCGATTACACTCTCTTTACCCATTTCCCCCTATGATTGGATGTAGTCCATGGGGCAAAGACGAGGTTCATCTCTCCCTTTCTCTTCTCTCAATCCGCTACTACGAGAAGATGAAATTCAAAAACAGACCCACATCTTGA

Coding sequence (CDS)

ATGAAGAAGAAAATCAAGATAATTATATCAGATTCACACGAACAAGAAACAGAGTCCCAACCACCACCCTCTACGTTTGCAAATTTAGACGACAATCTGTTGTTCGAGGTGTTTAAGCACGTCGATGCAAGAACACTGGCCACGGCGGCCGGAGTCAGCAAGCAGTGGTTCAAAACCGCCCACGACGAGCGCCTCTGGGAGCTGCTCTGCACCAAACACTGGACCAACCTCGGCTGTGCTAATCAACAGCTACGCTCCGTCGTGCTTGCGCTTGGTGGCTTCCGTCGATTACACTCTCTTTACCCATTTCCCCCTATGATTGGATGTAGTCCATGGGGCAAAGACGAGGTTCATCTCTCCCTTTCTCTTCTCTCAATCCGCTACTACGAGAAGATGAAATTCAAAAACAGACCCACATCTTGA

Protein sequence

MKKKIKIIISDSHEQETESQPPPSTFANLDDNLLFEVFKHVDARTLATAAGVSKQWFKTAHDERLWELLCTKHWTNLGCANQQLRSVVLALGGFRRLHSLYPFPPMIGCSPWGKDEVHLSLSLLSIRYYEKMKFKNRPTS

Homology

[Close]

BLAST of CaUC08G155780 vs. NCBI nr
Match: XP_008445558.1 (PREDICTED: F-box protein GID2-like [Cucumis melo] >KAA0060929.1 F-box protein GID2-like [Cucumis melo var. makuwa])

HSP 1 Score: 263.8 bits (673), Expect = 8.2e-67
Identity = 129/143 (90.21%), Postives = 133/143 (93.01%), Query Frame = 0


Query: 1   MKKKIKIIISDSHEQE--TESQPPPSTFANLDDNLLFEVFKHVDARTLATAAGVSKQWFK 60
           M  KIK   SDS++QE   ESQP PSTFANLDDNLLFEVFKHVDARTLATAAGV+KQWFK
Sbjct: 1   MNNKIKKFKSDSNQQEKPDESQPQPSTFANLDDNLLFEVFKHVDARTLATAAGVNKQWFK 60

Query: 61  TAHDERLWELLCTKHWTNLGCANQQLRSVVLALGGFRRLHSLYPFPPMIGCS-PWGKDEV 120
           TAHDERLWELLCTKHWTNLGCANQQLRSVVLALGGFRRLHSLYPFPPMIGC+ PWGKDEV
Sbjct: 61  TAHDERLWELLCTKHWTNLGCANQQLRSVVLALGGFRRLHSLYPFPPMIGCNHPWGKDEV 120

Query: 121 HLSLSLLSIRYYEKMKFKNRPTS 141
           HLSLSLLSIRYYEKMKFKNRPTS
Sbjct: 121 HLSLSLLSIRYYEKMKFKNRPTS 143

[Close]

BLAST of CaUC08G155780 vs. NCBI nr
Match: XP_004143017.1 (F-box protein GID2 [Cucumis sativus] >KGN62476.1 hypothetical protein Csa_018769 [Cucumis sativus])

HSP 1 Score: 258.1 bits (658), Expect = 4.5e-65
Identity = 126/142 (88.73%), Postives = 131/142 (92.25%), Query Frame = 0


Query: 1   MKKKIKIIISDSHEQETE-SQPPPSTFANLDDNLLFEVFKHVDARTLATAAGVSKQWFKT 60
           M  +IK   S S++QE + SQP PSTFANLDDNLLFEVFKHVDARTLAT AGVSKQWFKT
Sbjct: 1   MNNRIKKFKSVSNQQEPDHSQPQPSTFANLDDNLLFEVFKHVDARTLATVAGVSKQWFKT 60

Query: 61  AHDERLWELLCTKHWTNLGCANQQLRSVVLALGGFRRLHSLYPFPPMIGCS-PWGKDEVH 120
           AHDERLWELLCTKHWTNLGCANQQLRSVVLALGGFRRLHSLYPFPPMIGC+ PWGKDEVH
Sbjct: 61  AHDERLWELLCTKHWTNLGCANQQLRSVVLALGGFRRLHSLYPFPPMIGCNHPWGKDEVH 120

Query: 121 LSLSLLSIRYYEKMKFKNRPTS 141
           LSLSLLSIRYYEKMKFKNRPTS
Sbjct: 121 LSLSLLSIRYYEKMKFKNRPTS 142

[Close]

BLAST of CaUC08G155780 vs. NCBI nr
Match: XP_023522812.1 (F-box protein GID2-like [Cucurbita pepo subsp. pepo] >XP_023547045.1 F-box protein GID2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 239.6 bits (610), Expect = 1.6e-59
Identity = 120/143 (83.92%), Postives = 125/143 (87.41%), Query Frame = 0


Query: 3   KKIKIIISDSHEQETESQPPPST--FANLDDNLLFEVFKHVDARTLATAAGVSKQWFKTA 62
           KKIK     S  QE +S PP S+  FANLDDNLLFEVFKHVDARTLATAAGVSKQW+KTA
Sbjct: 2   KKIK-----SVSQEQQSPPPSSSSAFANLDDNLLFEVFKHVDARTLATAAGVSKQWYKTA 61

Query: 63  HDERLWELLCTKHWTNLGCANQQLRSVVLALGGFRRLHSLYPFPPMIG---CSPWGKDEV 122
           HDE LWELLCTKHW N+GCANQQLRSVVLALGGFRRLHSLYPFPP+IG   C PWGKDEV
Sbjct: 62  HDEWLWELLCTKHWANIGCANQQLRSVVLALGGFRRLHSLYPFPPVIGSASCIPWGKDEV 121

Query: 123 HLSLSLLSIRYYEKMKFKNRPTS 141
           HLSLSLLSIRYYEKMKFKNRPTS
Sbjct: 122 HLSLSLLSIRYYEKMKFKNRPTS 139

[Close]

BLAST of CaUC08G155780 vs. NCBI nr
Match: KAG6598351.1 (F-box protein GID2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7029322.1 F-box protein GID2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 238.8 bits (608), Expect = 2.8e-59
Identity = 117/143 (81.82%), Postives = 124/143 (86.71%), Query Frame = 0


Query: 3   KKIKIIISDSHEQETESQPPPST--FANLDDNLLFEVFKHVDARTLATAAGVSKQWFKTA 62
           KKIK +       E +  PPPS+  FANLDDNLLFEVFKHVDARTLATAAGVSKQW+KTA
Sbjct: 2   KKIKSV------SEEQQSPPPSSSAFANLDDNLLFEVFKHVDARTLATAAGVSKQWYKTA 61

Query: 63  HDERLWELLCTKHWTNLGCANQQLRSVVLALGGFRRLHSLYPFPPMIG---CSPWGKDEV 122
           HDE LWELLCTKHW N+GCANQQLRSVVLALGGFRRLHSLYPFPP+IG   C PWGKDE+
Sbjct: 62  HDEWLWELLCTKHWANIGCANQQLRSVVLALGGFRRLHSLYPFPPIIGSASCIPWGKDEL 121

Query: 123 HLSLSLLSIRYYEKMKFKNRPTS 141
           HLSLSLLSIRYYEKMKFKNRPTS
Sbjct: 122 HLSLSLLSIRYYEKMKFKNRPTS 138

[Close]

BLAST of CaUC08G155780 vs. NCBI nr
Match: XP_022962352.1 (F-box protein GID2-like [Cucurbita moschata])

HSP 1 Score: 235.7 bits (600), Expect = 2.4e-58
Identity = 116/143 (81.12%), Postives = 123/143 (86.01%), Query Frame = 0


Query: 3   KKIKIIISDSHEQETESQPPPST--FANLDDNLLFEVFKHVDARTLATAAGVSKQWFKTA 62
           KKIK +       E +  PPPS+  FANLDDNLLFEVFKHVDARTLATAAGVSKQW KTA
Sbjct: 2   KKIKSV------SEEQQSPPPSSSAFANLDDNLLFEVFKHVDARTLATAAGVSKQWCKTA 61

Query: 63  HDERLWELLCTKHWTNLGCANQQLRSVVLALGGFRRLHSLYPFPPMIG---CSPWGKDEV 122
           HDE LWELLCTKHW N+GCANQQLRSVVLALGGFRRLHSLYPFPP++G   C PWGKDE+
Sbjct: 62  HDEWLWELLCTKHWANIGCANQQLRSVVLALGGFRRLHSLYPFPPIMGSASCIPWGKDEL 121

Query: 123 HLSLSLLSIRYYEKMKFKNRPTS 141
           HLSLSLLSIRYYEKMKFKNRPTS
Sbjct: 122 HLSLSLLSIRYYEKMKFKNRPTS 138

[Close]

BLAST of CaUC08G155780 vs. ExPASy Swiss-Prot
Match: Q9STX3 (F-box protein GID2 OS=Arabidopsis thaliana OX=3702 GN=GID2 PE=1 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 1.2e-39
Identity = 79/116 (68.10%), Postives = 95/116 (81.90%), Query Frame = 0


Query: 26  FANLDDNLLFEVFKHVDARTLATAAGVSKQWFKTAHDERLWELLCTKHWTNLGCANQQLR 85
           F+NLD+NL++EV KHVDA+TLA ++ VSK W KTA DERLWEL+CT+HWTN+GC   QLR
Sbjct: 32  FSNLDENLVYEVLKHVDAKTLAMSSCVSKIWHKTAQDERLWELICTRHWTNIGCGQNQLR 91

Query: 86  SVVLALGGFRRLHSLYPFPPMIGCSP---WGKDEVHLSLSLLSIRYYEKMKFKNRP 139
           SVVLALGGFRRLHSLY + P+   +P   +GKDE+ L+LSLLSIRYYEKM F  RP
Sbjct: 92  SVVLALGGFRRLHSLYLW-PLSKPNPRARFGKDELKLTLSLLSIRYYEKMSFTKRP 146

[Close]

BLAST of CaUC08G155780 vs. ExPASy Swiss-Prot
Match: Q7XAK4 (F-box protein GID2 OS=Oryza sativa subsp. japonica OX=39947 GN=GID2 PE=1 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 2.6e-23
Identity = 60/142 (42.25%), Postives = 83/142 (58.45%), Query Frame = 0


Query: 14  EQETESQPPPST-------FANLDDNLLFEVFKHVDARTLATAAGVSKQWFKTAHDERLW 73
           +Q+ E QPP            +L ++L+FEV +  +ARTLA AA VS+ W + A DERLW
Sbjct: 54  QQQQEEQPPEDAGEGEQPRVPDLGEDLVFEVLRRAEARTLAAAACVSRGWRQLAEDERLW 113

Query: 74  ELLCTKHWTNLGCANQQLRSVVLALGGFRRLHSLYPFP----------------PMIGCS 133
           E  C + W NLG + +QLR+VVL+LGGFRRLH++Y  P                P +   
Sbjct: 114 EAACVREWANLGFSERQLRAVVLSLGGFRRLHAVYIRPLQWRGAGVPRQQGRRQPPVRL- 173

[Close]

BLAST of CaUC08G155780 vs. ExPASy Swiss-Prot
Match: Q9LUB6 (F-box protein SNE OS=Arabidopsis thaliana OX=3702 GN=SNE PE=1 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 5.1e-11
Identity = 41/134 (30.60%), Postives = 77/134 (57.46%), Query Frame = 0


Query: 2   KKKIKIIISDSHEQETESQPPPSTFANLDDNLLFEVFKHVDARTLATAAGVSKQWFKTAH 61
           +K++ ++   +++++  +Q P  +  N   ++L E+ + +D  +L +AA V + W   A 
Sbjct: 4   EKRVGMVEKSNNKRQRVNQVPVFSI-NDHHDVLVEILRRLDGSSLCSAACVCRLWSAVAR 63

Query: 62  DERLWELLCTKHWTNLGCANQQLRSVVLALGGFRRLHSLYPFPPMIGCSP---WGKDEVH 121
           ++ +WE LC +  +     +  LRSVV ALGG+R L+ L    P++   P   W +D++ 
Sbjct: 64  NDSIWEELCFRQVSPR--PSLSLRSVVSALGGYRCLYFLC-IRPVLARLPKLLWTRDQLQ 123

Query: 122 LSLSLLSIRYYEKM 133
           LSLSL  + YYE++
Sbjct: 124 LSLSLYCVHYYERL 133

[Close]

BLAST of CaUC08G155780 vs. ExPASy TrEMBL
Match: A0A5A7V5E1 (F-box protein GID2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00620 PE=4 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 4.0e-67
Identity = 129/143 (90.21%), Postives = 133/143 (93.01%), Query Frame = 0


Query: 1   MKKKIKIIISDSHEQE--TESQPPPSTFANLDDNLLFEVFKHVDARTLATAAGVSKQWFK 60
           M  KIK   SDS++QE   ESQP PSTFANLDDNLLFEVFKHVDARTLATAAGV+KQWFK
Sbjct: 1   MNNKIKKFKSDSNQQEKPDESQPQPSTFANLDDNLLFEVFKHVDARTLATAAGVNKQWFK 60

Query: 61  TAHDERLWELLCTKHWTNLGCANQQLRSVVLALGGFRRLHSLYPFPPMIGCS-PWGKDEV 120
           TAHDERLWELLCTKHWTNLGCANQQLRSVVLALGGFRRLHSLYPFPPMIGC+ PWGKDEV
Sbjct: 61  TAHDERLWELLCTKHWTNLGCANQQLRSVVLALGGFRRLHSLYPFPPMIGCNHPWGKDEV 120

Query: 121 HLSLSLLSIRYYEKMKFKNRPTS 141
           HLSLSLLSIRYYEKMKFKNRPTS
Sbjct: 121 HLSLSLLSIRYYEKMKFKNRPTS 143

[Close]

BLAST of CaUC08G155780 vs. ExPASy TrEMBL
Match: A0A1S3BDV6 (F-box protein GID2-like OS=Cucumis melo OX=3656 GN=LOC103488538 PE=4 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 4.0e-67
Identity = 129/143 (90.21%), Postives = 133/143 (93.01%), Query Frame = 0


Query: 1   MKKKIKIIISDSHEQE--TESQPPPSTFANLDDNLLFEVFKHVDARTLATAAGVSKQWFK 60
           M  KIK   SDS++QE   ESQP PSTFANLDDNLLFEVFKHVDARTLATAAGV+KQWFK
Sbjct: 1   MNNKIKKFKSDSNQQEKPDESQPQPSTFANLDDNLLFEVFKHVDARTLATAAGVNKQWFK 60

Query: 61  TAHDERLWELLCTKHWTNLGCANQQLRSVVLALGGFRRLHSLYPFPPMIGCS-PWGKDEV 120
           TAHDERLWELLCTKHWTNLGCANQQLRSVVLALGGFRRLHSLYPFPPMIGC+ PWGKDEV
Sbjct: 61  TAHDERLWELLCTKHWTNLGCANQQLRSVVLALGGFRRLHSLYPFPPMIGCNHPWGKDEV 120

Query: 121 HLSLSLLSIRYYEKMKFKNRPTS 141
           HLSLSLLSIRYYEKMKFKNRPTS
Sbjct: 121 HLSLSLLSIRYYEKMKFKNRPTS 143

[Close]

BLAST of CaUC08G155780 vs. ExPASy TrEMBL
Match: A0A0A0LR75 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G355020 PE=4 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 2.2e-65
Identity = 126/142 (88.73%), Postives = 131/142 (92.25%), Query Frame = 0


Query: 1   MKKKIKIIISDSHEQETE-SQPPPSTFANLDDNLLFEVFKHVDARTLATAAGVSKQWFKT 60
           M  +IK   S S++QE + SQP PSTFANLDDNLLFEVFKHVDARTLAT AGVSKQWFKT
Sbjct: 1   MNNRIKKFKSVSNQQEPDHSQPQPSTFANLDDNLLFEVFKHVDARTLATVAGVSKQWFKT 60

Query: 61  AHDERLWELLCTKHWTNLGCANQQLRSVVLALGGFRRLHSLYPFPPMIGCS-PWGKDEVH 120
           AHDERLWELLCTKHWTNLGCANQQLRSVVLALGGFRRLHSLYPFPPMIGC+ PWGKDEVH
Sbjct: 61  AHDERLWELLCTKHWTNLGCANQQLRSVVLALGGFRRLHSLYPFPPMIGCNHPWGKDEVH 120

Query: 121 LSLSLLSIRYYEKMKFKNRPTS 141
           LSLSLLSIRYYEKMKFKNRPTS
Sbjct: 121 LSLSLLSIRYYEKMKFKNRPTS 142

[Close]

BLAST of CaUC08G155780 vs. ExPASy TrEMBL
Match: A0A6J1HCI1 (F-box protein GID2-like OS=Cucurbita moschata OX=3662 GN=LOC111462823 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 1.2e-58
Identity = 116/143 (81.12%), Postives = 123/143 (86.01%), Query Frame = 0


Query: 3   KKIKIIISDSHEQETESQPPPST--FANLDDNLLFEVFKHVDARTLATAAGVSKQWFKTA 62
           KKIK +       E +  PPPS+  FANLDDNLLFEVFKHVDARTLATAAGVSKQW KTA
Sbjct: 2   KKIKSV------SEEQQSPPPSSSAFANLDDNLLFEVFKHVDARTLATAAGVSKQWCKTA 61

Query: 63  HDERLWELLCTKHWTNLGCANQQLRSVVLALGGFRRLHSLYPFPPMIG---CSPWGKDEV 122
           HDE LWELLCTKHW N+GCANQQLRSVVLALGGFRRLHSLYPFPP++G   C PWGKDE+
Sbjct: 62  HDEWLWELLCTKHWANIGCANQQLRSVVLALGGFRRLHSLYPFPPIMGSASCIPWGKDEL 121

Query: 123 HLSLSLLSIRYYEKMKFKNRPTS 141
           HLSLSLLSIRYYEKMKFKNRPTS
Sbjct: 122 HLSLSLLSIRYYEKMKFKNRPTS 138

[Close]

BLAST of CaUC08G155780 vs. ExPASy TrEMBL
Match: A0A6J1K7I7 (F-box protein GID2-like OS=Cucurbita maxima OX=3661 GN=LOC111491869 PE=4 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 3.7e-57
Identity = 116/142 (81.69%), Postives = 122/142 (85.92%), Query Frame = 0


Query: 3   KKIKIIISDSHEQETESQPPPST-FANLDDNLLFEVFKHVDARTLATAAGVSKQWFKTAH 62
           KKIK     S  QE +S PP S+ FANLDDNLLFEVFKHVDARTLATA+GVSKQW+KTAH
Sbjct: 2   KKIK-----SVSQEQQSPPPSSSAFANLDDNLLFEVFKHVDARTLATASGVSKQWYKTAH 61

Query: 63  DERLWELLCTKHWTNLGCANQQLRSVVLALGGFRRLHSLYPFPPMIG---CSPWGKDEVH 122
           DE LWELLCTKHW N+GCAN QLRSVVLALGGFRRLHSLYPFPP+IG   C  WGK EVH
Sbjct: 62  DEWLWELLCTKHWANIGCANPQLRSVVLALGGFRRLHSLYPFPPIIGSASCIAWGKGEVH 121

Query: 123 LSLSLLSIRYYEKMKFKNRPTS 141
           LSLSLLSIRYYEKMKFKNRPTS
Sbjct: 122 LSLSLLSIRYYEKMKFKNRPTS 138

[Close]

BLAST of CaUC08G155780 vs. TAIR 10
Match: AT4G24210.1 (F-box family protein )

HSP 1 Score: 164.1 bits (414), Expect = 8.2e-41
Identity = 79/116 (68.10%), Postives = 95/116 (81.90%), Query Frame = 0


Query: 26  FANLDDNLLFEVFKHVDARTLATAAGVSKQWFKTAHDERLWELLCTKHWTNLGCANQQLR 85
           F+NLD+NL++EV KHVDA+TLA ++ VSK W KTA DERLWEL+CT+HWTN+GC   QLR
Sbjct: 32  FSNLDENLVYEVLKHVDAKTLAMSSCVSKIWHKTAQDERLWELICTRHWTNIGCGQNQLR 91

Query: 86  SVVLALGGFRRLHSLYPFPPMIGCSP---WGKDEVHLSLSLLSIRYYEKMKFKNRP 139
           SVVLALGGFRRLHSLY + P+   +P   +GKDE+ L+LSLLSIRYYEKM F  RP
Sbjct: 92  SVVLALGGFRRLHSLYLW-PLSKPNPRARFGKDELKLTLSLLSIRYYEKMSFTKRP 146

[Close]

BLAST of CaUC08G155780 vs. TAIR 10
Match: AT5G48170.1 (F-box family protein )

HSP 1 Score: 68.9 bits (167), Expect = 3.6e-12
Identity = 41/134 (30.60%), Postives = 77/134 (57.46%), Query Frame = 0


Query: 2   KKKIKIIISDSHEQETESQPPPSTFANLDDNLLFEVFKHVDARTLATAAGVSKQWFKTAH 61
           +K++ ++   +++++  +Q P  +  N   ++L E+ + +D  +L +AA V + W   A 
Sbjct: 4   EKRVGMVEKSNNKRQRVNQVPVFSI-NDHHDVLVEILRRLDGSSLCSAACVCRLWSAVAR 63

Query: 62  DERLWELLCTKHWTNLGCANQQLRSVVLALGGFRRLHSLYPFPPMIGCSP---WGKDEVH 121
           ++ +WE LC +  +     +  LRSVV ALGG+R L+ L    P++   P   W +D++ 
Sbjct: 64  NDSIWEELCFRQVSPR--PSLSLRSVVSALGGYRCLYFLC-IRPVLARLPKLLWTRDQLQ 123

Query: 122 LSLSLLSIRYYEKM 133
           LSLSL  + YYE++
Sbjct: 124 LSLSLYCVHYYERL 133

The following BLAST results are available for this feature:

BLAST of CaUC08G155780 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008445558.1	8.2e-67	90.21	PREDICTED: F-box protein GID2-like [Cucumis melo] >KAA0060929.1 F-box protein GI...	[more]
XP_004143017.1	4.5e-65	88.73	F-box protein GID2 [Cucumis sativus] >KGN62476.1 hypothetical protein Csa_018769...	[more]
XP_023522812.1	1.6e-59	83.92	F-box protein GID2-like [Cucurbita pepo subsp. pepo] >XP_023547045.1 F-box prote...	[more]
KAG6598351.1	2.8e-59	81.82	F-box protein GID2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7029322....	[more]
XP_022962352.1	2.4e-58	81.12	F-box protein GID2-like [Cucurbita moschata]	[more]

BLAST of CaUC08G155780 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9STX3	1.2e-39	68.10	F-box protein GID2 OS=Arabidopsis thaliana OX=3702 GN=GID2 PE=1 SV=1	[more]
Q7XAK4	2.6e-23	42.25	F-box protein GID2 OS=Oryza sativa subsp. japonica OX=39947 GN=GID2 PE=1 SV=1	[more]
Q9LUB6	5.1e-11	30.60	F-box protein SNE OS=Arabidopsis thaliana OX=3702 GN=SNE PE=1 SV=1	[more]

BLAST of CaUC08G155780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V5E1	4.0e-67	90.21	F-box protein GID2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A1S3BDV6	4.0e-67	90.21	F-box protein GID2-like OS=Cucumis melo OX=3656 GN=LOC103488538 PE=4 SV=1	[more]
A0A0A0LR75	2.2e-65	88.73	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G355020 PE=4 ...	[more]
A0A6J1HCI1	1.2e-58	81.12	F-box protein GID2-like OS=Cucurbita moschata OX=3662 GN=LOC111462823 PE=4 SV=1	[more]
A0A6J1K7I7	3.7e-57	81.69	F-box protein GID2-like OS=Cucurbita maxima OX=3661 GN=LOC111491869 PE=4 SV=1	[more]

BLAST of CaUC08G155780 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G24210.1	8.2e-41	68.10	F-box family protein	[more]
AT5G48170.1	3.6e-12	30.60	F-box family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	SMART	SM00256	fbox_2	coord: 29..69 e-value: 0.0031 score: 26.7
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 25..70 e-value: 1.1E-6 score: 28.4
IPR001810	F-box domain	PROSITE	PS50181	FBOX	coord: 23..69 score: 9.709425
None	No IPR available	GENE3D	1.20.1280.50		coord: 11..114 e-value: 2.8E-11 score: 45.2
None	No IPR available	PANTHER	PTHR12874:SF22	F-BOX PROTEIN GID2-LIKE	coord: 106..135
None	No IPR available	PANTHER	PTHR12874:SF22	F-BOX PROTEIN GID2-LIKE	coord: 9..104
IPR045118	F-box only protein FBXO9/FBXO48	PANTHER	PTHR12874	F-BOX ONLY PROTEIN 48-RELATED	coord: 9..104
IPR045118	F-box only protein FBXO9/FBXO48	PANTHER	PTHR12874	F-BOX ONLY PROTEIN 48-RELATED	coord: 106..135
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 18..104

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC08G155780.1	CaUC08G155780.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009740	gibberellic acid mediated signaling pathway
biological_process	GO:0031146	SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
cellular_component	GO:0019005	SCF ubiquitin ligase complex
molecular_function	GO:0005515	protein binding