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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGCGAGCCGTTCAGTGAACAACCTCTTGTGCAGGGATGACATGAGGAGAGCGTACAGAGAGAAAGCTGGCAATGGGAGATCAAGAAGACGCGTTAAAGTCCGAGACATCATCGACATCTTAGACATCGTCGTACCCATCATCCCCCACTTCTTCGGGAACGGTCGTGTCGCTGCCAATGGTAACTACAGTGCCGGTCCCGACAACTACAATAGTTGTAACAACATGGGTGGTGGTTATGGTCGTGAAGATGACATGCCTTTCCACTGCGGAAATAATGGCGGAGGCCGGTTTGGCCTAATTGGCATGGCTTCTGGTGATTATGGCAGTGACAGCGGCCATTACGGCCATGGCAATGCTAACCATAATGGTCACTACGGAATGAGAATGGCTCGTGCTGAGGACTATGGCGATCGTGAAATTTCAGAGGAAGAGTTTGAGAGGCTCCTTGAGTTTGCCGAGCAGTGCAATGTTGTCAAGATGTACTGA mRNA sequence ATGGCGAGCCGTTCAGTGAACAACCTCTTGTGCAGGGATGACATGAGGAGAGCGTACAGAGAGAAAGCTGGCAATGGGAGATCAAGAAGACGCGTTAAAGTCCGAGACATCATCGACATCTTAGACATCGTCGTACCCATCATCCCCCACTTCTTCGGGAACGGTCGTGTCGCTGCCAATGGTAACTACAGTGCCGGTCCCGACAACTACAATAGTTGTAACAACATGGGTGGTGGTTATGGTCGTGAAGATGACATGCCTTTCCACTGCGGAAATAATGGCGGAGGCCGGTTTGGCCTAATTGGCATGGCTTCTGGTGATTATGGCAGTGACAGCGGCCATTACGGCCATGGCAATGCTAACCATAATGGTCACTACGGAATGAGAATGGCTCGTGCTGAGGACTATGGCGATCGTGAAATTTCAGAGGAAGAGTTTGAGAGGCTCCTTGAGTTTGCCGAGCAGTGCAATGTTGTCAAGATGTACTGA Coding sequence (CDS) ATGGCGAGCCGTTCAGTGAACAACCTCTTGTGCAGGGATGACATGAGGAGAGCGTACAGAGAGAAAGCTGGCAATGGGAGATCAAGAAGACGCGTTAAAGTCCGAGACATCATCGACATCTTAGACATCGTCGTACCCATCATCCCCCACTTCTTCGGGAACGGTCGTGTCGCTGCCAATGGTAACTACAGTGCCGGTCCCGACAACTACAATAGTTGTAACAACATGGGTGGTGGTTATGGTCGTGAAGATGACATGCCTTTCCACTGCGGAAATAATGGCGGAGGCCGGTTTGGCCTAATTGGCATGGCTTCTGGTGATTATGGCAGTGACAGCGGCCATTACGGCCATGGCAATGCTAACCATAATGGTCACTACGGAATGAGAATGGCTCGTGCTGAGGACTATGGCGATCGTGAAATTTCAGAGGAAGAGTTTGAGAGGCTCCTTGAGTTTGCCGAGCAGTGCAATGTTGTCAAGATGTACTGA Protein sequence MASRSVNNLLCRDDMRRAYREKAGNGRSRRRVKVRDIIDILDIVVPIIPHFFGNGRVAANGNYSAGPDNYNSCNNMGGGYGREDDMPFHCGNNGGGRFGLIGMASGDYGSDSGHYGHGNANHNGHYGMRMARAEDYGDREISEEEFERLLEFAEQCNVVKMY
Homology
BLAST of CaUC08G155380 vs. NCBI nr
Match: KGN62520.1 (hypothetical protein Csa_022281 [Cucumis sativus]) HSP 1 Score: 173.7 bits (439), Expect = 1.3e-39 Identity = 108/169 (63.91%), Postives = 124/169 (73.37%), Query Frame = 0
Query: 1 MASRSVNNL-LCRDDMRRAYREKAGNGRSRRRVKVRDIIDILDIVVPIIPHFFGNGRVAA 60
MA RSVNNL +DDMRRAYREK G+ R RRR+K+RDIID+L+IV PIIPHFFG
Sbjct: 1 MAFRSVNNLQFWKDDMRRAYREKVGSSR-RRRIKIRDIIDVLEIVGPIIPHFFG------ 60
Query: 61 NGNYSAGPDNYNSC--NNMGGGYGREDD--MPFHCGNNGGGRFGLIGMASGDYGSDSGHY 120
+ + SAGPDNY++ N+M G YGR DD FHCG GGGRFGL M SGDYG++S HY
Sbjct: 61 SNSLSAGPDNYSNYGNNHMNGSYGRRDDDMHSFHCGGGGGGRFGL-DMGSGDYGNESRHY 120
Query: 121 GHGNANHNGHYGMRMARAEDYGDREISEEEFERLLEFAEQC--NVVKMY 163
G G N N YGMRMA AEDY DREI+EEEFERLL+FAEQ N +MY
Sbjct: 121 G-GRGNGNSQYGMRMALAEDYYDREITEEEFERLLDFAEQSHNNNSRMY 160
BLAST of CaUC08G155380 vs. NCBI nr
Match: XP_022962401.1 (zinc transporter 7-like [Cucurbita moschata]) HSP 1 Score: 136.0 bits (341), Expect = 3.0e-28 Identity = 86/168 (51.19%), Postives = 110/168 (65.48%), Query Frame = 0
Query: 1 MASRSVNNLLCRDDMRRAYREKAGNGRSRRRVKVRDIIDILDIVVPIIPHFFGNGRVAAN 60
MA RSV+NL CRDD+ YR A R R RVK+RDII+I++I+ PIIPHFF
Sbjct: 1 MACRSVDNLRCRDDLMNVYRANASRSR-RGRVKIRDIIEIIEILGPIIPHFF-------- 60
Query: 61 GNYSAGPDNYNSCNNMGGGYGREDDMPFHCGNNGGGRFGLIGMASGDYGSDSGHY----G 120
G +N++SC +M GY R+ D + G RFG GMASG+YG+ SGHY G
Sbjct: 61 -KKHGGANNFSSCGSM--GYARDQD-------DMGSRFG-FGMASGEYGNGSGHYGHSHG 120
Query: 121 HGNANHNG--HYGMRMARAEDYGDREISEEEFERLLEFAEQCNVVKMY 163
HG+++ +G HYGM M +DY D EISEEEFE+LL++AEQCN V+MY
Sbjct: 121 HGHSHSHGESHYGMSMGHVDDYADHEISEEEFEKLLDYAEQCN-VRMY 147
BLAST of CaUC08G155380 vs. NCBI nr
Match: XP_023545419.1 (zinc transporter 7-A-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023545420.1 zinc transporter 7-A-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 133.7 bits (335), Expect = 1.5e-27 Identity = 84/173 (48.55%), Postives = 106/173 (61.27%), Query Frame = 0
Query: 1 MASRSVNNLLCRDDMRRAYREKAGNGRSRRRVKVRDIIDILDIVVPIIPHFFGNGRVAAN 60
MA RSV+NL CRDD+ YR A R R RVK+RDII+I++I+ PIIP FF
Sbjct: 1 MACRSVDNLRCRDDLMNVYRANARRSR-RGRVKIRDIIEIIEILGPIIPPFF-------- 60
Query: 61 GNYSAGPDNYNSCNNMGGGYGR-EDDMPFHCGNNGGGRFGLIGMASGDYGSDSGHYGHGN 120
G +N++SC +M GY R +DDM CG GM+SGDYG+ SGHYGH +
Sbjct: 61 -QKHGGANNFSSCGSM--GYARDQDDMGSRCG---------FGMSSGDYGNGSGHYGHSH 120
Query: 121 ANHNG----------HYGMRMARAEDYGDREISEEEFERLLEFAEQCNVVKMY 163
+ +G HYGM M +DY D EISEEEFE+LL++AEQCN V+MY
Sbjct: 121 GHGHGHGHSHSHGESHYGMSMGHVDDYADHEISEEEFEKLLDYAEQCN-VRMY 151
BLAST of CaUC08G155380 vs. NCBI nr
Match: KAG6598377.1 (hypothetical protein SDJN03_08155, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 131.3 bits (329), Expect = 7.3e-27 Identity = 85/168 (50.60%), Postives = 109/168 (64.88%), Query Frame = 0
Query: 1 MASRSVNNLLCRDDMRRAYREKAGNGRSRRRVKVRDIIDILDIVVPIIPHFFGNGRVAAN 60
MA RSV+NL CRDD+ YR A R R RVK+RDII+I++I+ PIIP FF
Sbjct: 1 MACRSVDNLRCRDDLMNVYRANARRSR-RGRVKIRDIIEIIEILGPIIPPFF-------- 60
Query: 61 GNYSAGPDNYNSCNNMGGGYGREDDMPFHCGNNGGGRFGLIGMASGDYGSDSGHY----G 120
G +N++SC +M GY R+ D + G RFG GMASG+YG+ SGHY G
Sbjct: 61 -QKHGGANNFSSCGSM--GYARDQD-------DMGSRFG-FGMASGEYGNGSGHYGHSHG 120
Query: 121 HGNANHNG--HYGMRMARAEDYGDREISEEEFERLLEFAEQCNVVKMY 163
HG+++ +G HYGM M +DY D EISEEEFE+LL++AEQCN V+MY
Sbjct: 121 HGHSHSHGESHYGMSMGHVDDYADHEISEEEFEKLLDYAEQCN-VRMY 147
BLAST of CaUC08G155380 vs. NCBI nr
Match: KAG6598378.1 (hypothetical protein SDJN03_08156, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 87.4 bits (215), Expect = 1.2e-13 Identity = 66/163 (40.49%), Postives = 86/163 (52.76%), Query Frame = 0
Query: 1 MASRSVNNLLCRDDMRRAYREKAGNGRSRRRVKVRDIIDILDIVVPIIPHFFGNGRVAAN 60
MA RSV+NL CRDD+ YR A R R VK+RDII I+ I+ P++PHFF R AN
Sbjct: 1 MACRSVDNLRCRDDLMNVYRANAHRSR-RGSVKIRDIIGIIKILGPVVPHFF-ERRNGAN 60
Query: 61 GNYSAGPDNYNSCNNMGGGYGREDDMPFHCGNNGGGRFGLIGMASGDYGSDSGH-YGHGN 120
+ M + ++ M + + GH +GH +
Sbjct: 61 VTLVV----------VAAWVMLVTRMTWVPALGLVWLLVIMAMVAATMATAHGHGHGHSH 120
Query: 121 ANHNGHYGMRMARAEDYGDREISEEEFERLLEFAEQCNVVKMY 163
++ HYGM M +DY D EISEEEFERLL++AEQCN VKMY
Sbjct: 121 SHGESHYGMSMGHVDDYADHEISEEEFERLLDYAEQCN-VKMY 150
BLAST of CaUC08G155380 vs. ExPASy TrEMBL
Match: A0A0A0LKW7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G359890 PE=4 SV=1) HSP 1 Score: 173.7 bits (439), Expect = 6.2e-40 Identity = 108/169 (63.91%), Postives = 124/169 (73.37%), Query Frame = 0
Query: 1 MASRSVNNL-LCRDDMRRAYREKAGNGRSRRRVKVRDIIDILDIVVPIIPHFFGNGRVAA 60
MA RSVNNL +DDMRRAYREK G+ R RRR+K+RDIID+L+IV PIIPHFFG
Sbjct: 1 MAFRSVNNLQFWKDDMRRAYREKVGSSR-RRRIKIRDIIDVLEIVGPIIPHFFG------ 60
Query: 61 NGNYSAGPDNYNSC--NNMGGGYGREDD--MPFHCGNNGGGRFGLIGMASGDYGSDSGHY 120
+ + SAGPDNY++ N+M G YGR DD FHCG GGGRFGL M SGDYG++S HY
Sbjct: 61 SNSLSAGPDNYSNYGNNHMNGSYGRRDDDMHSFHCGGGGGGRFGL-DMGSGDYGNESRHY 120
Query: 121 GHGNANHNGHYGMRMARAEDYGDREISEEEFERLLEFAEQC--NVVKMY 163
G G N N YGMRMA AEDY DREI+EEEFERLL+FAEQ N +MY
Sbjct: 121 G-GRGNGNSQYGMRMALAEDYYDREITEEEFERLLDFAEQSHNNNSRMY 160
BLAST of CaUC08G155380 vs. ExPASy TrEMBL
Match: A0A6J1HD14 (zinc transporter 7-like OS=Cucurbita moschata OX=3662 GN=LOC111462856 PE=4 SV=1) HSP 1 Score: 136.0 bits (341), Expect = 1.4e-28 Identity = 86/168 (51.19%), Postives = 110/168 (65.48%), Query Frame = 0
Query: 1 MASRSVNNLLCRDDMRRAYREKAGNGRSRRRVKVRDIIDILDIVVPIIPHFFGNGRVAAN 60
MA RSV+NL CRDD+ YR A R R RVK+RDII+I++I+ PIIPHFF
Sbjct: 1 MACRSVDNLRCRDDLMNVYRANASRSR-RGRVKIRDIIEIIEILGPIIPHFF-------- 60
Query: 61 GNYSAGPDNYNSCNNMGGGYGREDDMPFHCGNNGGGRFGLIGMASGDYGSDSGHY----G 120
G +N++SC +M GY R+ D + G RFG GMASG+YG+ SGHY G
Sbjct: 61 -KKHGGANNFSSCGSM--GYARDQD-------DMGSRFG-FGMASGEYGNGSGHYGHSHG 120
Query: 121 HGNANHNG--HYGMRMARAEDYGDREISEEEFERLLEFAEQCNVVKMY 163
HG+++ +G HYGM M +DY D EISEEEFE+LL++AEQCN V+MY
Sbjct: 121 HGHSHSHGESHYGMSMGHVDDYADHEISEEEFEKLLDYAEQCN-VRMY 147
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
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| KGN62520.1 | 1.3e-39 | 63.91 | hypothetical protein Csa_022281 [Cucumis sativus] | [more] |
| XP_022962401.1 | 3.0e-28 | 51.19 | zinc transporter 7-like [Cucurbita moschata] | [more] |
| XP_023545419.1 | 1.5e-27 | 48.55 | zinc transporter 7-A-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023545420.... | [more] |
| KAG6598377.1 | 7.3e-27 | 50.60 | hypothetical protein SDJN03_08155, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| KAG6598378.1 | 1.2e-13 | 40.49 | hypothetical protein SDJN03_08156, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0LKW7 | 6.2e-40 | 63.91 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G359890 PE=4 SV=1 | [more] |
| A0A6J1HD14 | 1.4e-28 | 51.19 | zinc transporter 7-like OS=Cucurbita moschata OX=3662 GN=LOC111462856 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
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Relationships
The following mRNA feature(s) are a part of this gene:
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