CaUC08G155000 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCTGTGAGTATTAAATGCACACAGAAGTTTCAACTTTTCACTCCTTTCCTTTCCTCTTTTCCTAACCTTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCAAGCCTTTCCATATTACTCAAAACTAAAACCCTCTTTTTAATTTCCTTTTCTCTCATTTTGGGAATTTTTAATTTTTTATTCCAAATAAATAAATCCATTCATTCAGAATTAAGTTCTCTGGTTTTCCATGATCATCGTCACCCACAACTGGAAAAGAATAAAGATCCCATTTTTCGAAACCCCTTTCTCAATCTCTTTCTCCCAAATCATAATCCACTCATAACCTCAAAAGGGTCATCACCTTTTTCTTCAAAATCATCGTATAATTAATTATTCTCATCTCATGTTTTCCTCCACAACCCACCATAGCCATTGGAATAATTTCATCATGGACTACACCACCACCGCCCCACCGCCGCCGCCATTGCCAGACCTTTCCTTACACATAAGTCCACCGTCGGATTCCGGCAATCATTATTTGAAAAACCAGCAACCTCAAATCTATGGAAGCCATTTGAAGAGAGGGGCAAAAATGGGATTTGGGATTAAAAGAAGCATTAGAGCTCCAAGAATGAGATGGACTACTACTCTTCATGCCCATTTTGTCCATGCCGTTCAGCTCCTTGGCGGCCATGAAAGTACACCCTTGCCCTTACCCTTACCCTTTTCTATTGTTATGATCATGATTATTCTCCACTATTTGAAAAAATTAATCAAATTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAATATTAATGGTTTTCTTTTAAGAGACACAATGAGAGCAAAGTTGTCATTTTTATTTTCCTTCTTTGTGTTTCAAATAAGAATTGAATTGCAATAGTATTTTGAGAACAAAGAAGTGAGGACAAAAGAGCATCAAGAGTGTAATCTTTGCATTATTGACTCTTTTTCTCTTAATTTCATTTTCTTTTTTTTTTTTTTTTTTTTTTGGCTCATGCAGATGTATAGAACAGTGAAAAGCACTGACAAAGCAACTGGTAAATAACTATTTTTTTTTCCCTTTCTTTTCCTCACATTTGCTACACTCTCATCTTGGGAGTTTTCTAAGATCTCGTTTATAAATATTCCGGCTCCCTTGGTTAACTATTTCATTTCTGGTTTTTAGTTTTTAAAAATTAAATATATTTTCTCAACATTTCTTACTTGTATTTGCATCTTTCTTAAGTACAATAATTGGTTCTTAGCCAAATTTGAAAAACAAGAACAACCTTTTTAAAGGCTACTTCTTTTAATTTTTCAAATTTTGGCTTAGTTTTTTAAATGTTAAAAGCTAGACAACAAAAGAAGAAATTTGAAGGTTGATGTGGTGTCTATAGGCTTAATTTTAAGAAACAAAAACTAAATACAAAATCGTTACCAAACGGGGCTTTAAATTTTTTTTAAAATGTAAGTTTTTTATTTATCAATGTTTTCAATATTCATGCCATTGAGAGTAATAGATTTTAAAAAACTTGATTTTATTTTGTGTTCGAAATTTGAATGGAGAAGAAAATGTTTTCCTAAGAAATTTTGAGCCCTTTTCTACTCTCAATTACGAAGTTTTTATTTCTAGAATTTCTTTGATAAATATTCGATCTTTTATTTTTAGTTTTAAAAAAAAATATATAAAAAATACTTAATTTCTAAAAAATGTTTGCAATCCTCACCTCAAGTTTCAATAACTTGATATATATATATATAGATAGGGGGAACAAACAAATTTAAAAAACACAATTTTCAAGAACTACAAATCAAATAGTTATGAGTGGAGGTTAAGTGTTAATTTGAGCTCAAAATGATTTATTTTAGGGTTCGGATCAATTTTTGATGAAAATGGAAGTTTTGATTGTTAATTTAAATCTGCAGACTCAGCCATGAAGAACCAAAGGCAAGAAATTGAAGCAAGTGGTGTTTCGAATTGTGAGAATTCTAAACCACCACTTACAATGTGGAAAAGCCCCAATCAACAAATGTGAGTGCATTTTTTTTCCAAACTCTTGGATTTTCATTTCTGTTTCTAAATAATCAATGACACTGTTTGAATCTTGTTTTCATTTGAAAGAAACATACATTTAAGTAATTTCACATGTGTAAATCAATAATTAGTTACTTAAACGTTTTGCATATGCAATATATTAGCTTCTTTGACCATACTCAACTGCCCATTACCTATCGCTTTATTTTGGGAATTTTGAGTGGGCACTGTCTTCTCTTAAAATATCATAAAATTAATTACTCACTCCTTGACTTAATAACCCATTAAAAAAAATTGACTTGACCATATTAGTTTGTTCAGTTTGAATTTTATTTTCTGTTGCAATCTCTAATTTCCATTAACTTGATGATTGATTATCACAATAATTGTTGATGGGCACATATTCCCATTTTTGTCATACTCACAATTGCCTTATATAGATTTCTATTTTGGTAACATTAAATCTCATTTACATTTATTATACACCCTTTTGCTTTAATTTATGTTGAAAAGTAATAGTTTTTAAAACCCTAGATATTTTTCAAAAACTTGAAGAGAAGGAAAAGAAAAGAAAAAAAACTATTTTTGAAAAACCCAATTTATTTCTTTTAATCCTATACGAGTAGTAATACACAATAAAATGTTAAATATGATTGTGGATCTAGAAAAATAATAGTAATTATCATTTCAAAAATTGATAATTCGATATTCACTTCCTATGATTAGAAAATCAAAGAGAAAAAAACAAAATTGAAACATTGGAAAAATGAGTAGACAAGAATGAATGGGTTAATTGATGATTAAATTAATGAATGATGAGCAGGAAATTGTTCTGTTCATCAATGGAGACAAATCAAGAGATGACGAGCAGATGGAGTCAACTTTGCAACAATAGTATTGGAAACAACCAGGTCCGTATATGTACAAAACACAATACAACAACAACCTTAAACAACAAATTATTTAAATTTTATTTTTAAATAGAACAGTAACTTATATCTAATAATGTTTTTTTTTTTTTTTTTTTTTTTCTGGGTTTGATTTGAAGCAGCAGCAGGAGAAGGACCGACACAATGGAAATGCAAATATGAAAATCTCGAGTGGTGTGAAGAAGCAGAATAATAATAATAATAATAATAATAGTAATAATAATATTAACTTAGACTTCACTTTGGGATGCCCTAATTCTCTAACAATCCATTCTAATCCTCACTCTTCATCTACTGAACTCCCTCTTCTCAAATGCTAAACTCAAAACACAAACCCTTTCTTTATGGGGTTTTGATTTTAGTTATTAACCTAATTAAATTAATGTGGGTTTTATTATTAATTATGCTGCTTCATATGTTTATTAATTAATGTGGCCTCTGTGTAATATTCTCATTTTCCAATGATATTCCATTGTTATATATATGTTATGATGGAG TCTGTGAGTATTAAATGCACACAGAAGTTTCAACTTTTCACTCCTTTCCTTTCCTCTTTTCCTAACCTTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCAAGCCTTTCCATATTACTCAAAACTAAAACCCTCTTTTTAATTTCCTTTTCTCTCATTTTGGGAATTTTTAATTTTTTATTCCAAATAAATAAATCCATTCATTCAGAATTAAGTTCTCTGGTTTTCCATGATCATCGTCACCCACAACTGGAAAAGAATAAAGATCCCATTTTTCGAAACCCCTTTCTCAATCTCTTTCTCCCAAATCATAATCCACTCATAACCTCAAAAGGGTCATCACCTTTTTCTTCAAAATCATCGTATAATTAATTATTCTCATCTCATGTTTTCCTCCACAACCCACCATAGCCATTGGAATAATTTCATCATGGACTACACCACCACCGCCCCACCGCCGCCGCCATTGCCAGACCTTTCCTTACACATAAGTCCACCGTCGGATTCCGGCAATCATTATTTGAAAAACCAGCAACCTCAAATCTATGGAAGCCATTTGAAGAGAGGGGCAAAAATGGGATTTGGGATTAAAAGAAGCATTAGAGCTCCAAGAATGAGATGGACTACTACTCTTCATGCCCATTTTGTCCATGCCGTTCAGCTCCTTGGCGGCCATGAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGTATAGAACAGTGAAAAGCACTGACAAAGCAACTGACTCAGCCATGAAGAACCAAAGGCAAGAAATTGAAGCAAGTGGTGTTTCGAATTGTGAGAATTCTAAACCACCACTTACAATGTGGAAAAGCCCCAATCAACAAATGAAATTGTTCTGTTCATCAATGGAGACAAATCAAGAGATGACGAGCAGATGGAGTCAACTTTGCAACAATAGTATTGGAAACAACCAGCAGCAGCAGGAGAAGGACCGACACAATGGAAATGCAAATATGAAAATCTCGAGTGGTGTGAAGAAGCAGAATAATAATAATAATAATAATAATAGTAATAATAATATTAACTTAGACTTCACTTTGGGATGCCCTAATTCTCTAACAATCCATTCTAATCCTCACTCTTCATCTACTGAACTCCCTCTTCTCAAATGCTAAACTCAAAACACAAACCCTTTCTTTATGGGGTTTTGATTTTAGTTATTAACCTAATTAAATTAATGTGGGTTTTATTATTAATTATGCTGCTTCATATGTTTATTAATTAATGTGGCCTCTGTGTAATATTCTCATTTTCCAATGATATTCCATTGTTATATATATGTTATGATGGAG ATGTTTTCCTCCACAACCCACCATAGCCATTGGAATAATTTCATCATGGACTACACCACCACCGCCCCACCGCCGCCGCCATTGCCAGACCTTTCCTTACACATAAGTCCACCGTCGGATTCCGGCAATCATTATTTGAAAAACCAGCAACCTCAAATCTATGGAAGCCATTTGAAGAGAGGGGCAAAAATGGGATTTGGGATTAAAAGAAGCATTAGAGCTCCAAGAATGAGATGGACTACTACTCTTCATGCCCATTTTGTCCATGCCGTTCAGCTCCTTGGCGGCCATGAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGTATAGAACAGTGAAAAGCACTGACAAAGCAACTGACTCAGCCATGAAGAACCAAAGGCAAGAAATTGAAGCAAGTGGTGTTTCGAATTGTGAGAATTCTAAACCACCACTTACAATGTGGAAAAGCCCCAATCAACAAATGAAATTGTTCTGTTCATCAATGGAGACAAATCAAGAGATGACGAGCAGATGGAGTCAACTTTGCAACAATAGTATTGGAAACAACCAGCAGCAGCAGGAGAAGGACCGACACAATGGAAATGCAAATATGAAAATCTCGAGTGGTGTGAAGAAGCAGAATAATAATAATAATAATAATAATAGTAATAATAATATTAACTTAGACTTCACTTTGGGATGCCCTAATTCTCTAACAATCCATTCTAATCCTCACTCTTCATCTACTGAACTCCCTCTTCTCAAATGCTAA MFSSTTHHSHWNNFIMDYTTTAPPPPPLPDLSLHISPPSDSGNHYLKNQQPQIYGSHLKRGAKMGFGIKRSIRAPRMRWTTTLHAHFVHAVQLLGGHEXXXXXXXXXXXXXXXXXXXXXXXXXXMYRTVKSTDKATDSAMKNQRQEIEASGVSNCENSKPPLTMWKSPNQQMKLFCSSMETNQEMTSRWSQLCNNSIGNNQQQQEKDRHNGNANMKISSGVKKQNNNNNNNNSNNNINLDFTLGCPNSLTIHSNPHSSSTELPLLKC Homology
BLAST of CaUC08G155000 vs. NCBI nr
Match: XP_038886496.1 (probable transcription factor KAN4 [Benincasa hispida]) HSP 1 Score: 413.7 bits (1062), Expect = 1.2e-111 Identity = 226/273 (82.78%), Postives = 236/273 (86.45%), Query Frame = 0
BLAST of CaUC08G155000 vs. NCBI nr
Match: XP_008444661.1 (PREDICTED: probable transcription factor KAN4 [Cucumis melo]) HSP 1 Score: 357.8 bits (917), Expect = 7.9e-95 Identity = 197/262 (75.19%), Postives = 208/262 (79.39%), Query Frame = 0
BLAST of CaUC08G155000 vs. NCBI nr
Match: XP_031736531.1 (probable transcription factor KAN4 isoform X1 [Cucumis sativus]) HSP 1 Score: 355.1 bits (910), Expect = 5.1e-94 Identity = 194/273 (71.06%), Postives = 210/273 (76.92%), Query Frame = 0
BLAST of CaUC08G155000 vs. NCBI nr
Match: XP_004152789.2 (probable transcription factor KAN4 isoform X2 [Cucumis sativus] >KGN62800.2 hypothetical protein Csa_022332 [Cucumis sativus]) HSP 1 Score: 349.0 bits (894), Expect = 3.7e-92 Identity = 193/273 (70.70%), Postives = 209/273 (76.56%), Query Frame = 0
BLAST of CaUC08G155000 vs. NCBI nr
Match: XP_031736532.1 (probable transcription factor KAN4 isoform X3 [Cucumis sativus]) HSP 1 Score: 347.1 bits (889), Expect = 1.4e-91 Identity = 192/273 (70.33%), Postives = 208/273 (76.19%), Query Frame = 0
BLAST of CaUC08G155000 vs. ExPASy Swiss-Prot
Match: Q9FJV5 (Probable transcription factor KAN4 OS=Arabidopsis thaliana OX=3702 GN=KAN4 PE=1 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 1.4e-17 Identity = 76/218 (34.86%), Postives = 102/218 (46.79%), Query Frame = 0
BLAST of CaUC08G155000 vs. ExPASy Swiss-Prot
Match: Q0J235 (Probable transcription factor RL9 OS=Oryza sativa subsp. japonica OX=39947 GN=RL9 PE=2 SV=2) HSP 1 Score: 71.2 bits (173), Expect = 1.9e-11 Identity = 42/97 (43.30%), Postives = 51/97 (52.58%), Query Frame = 0
BLAST of CaUC08G155000 vs. ExPASy Swiss-Prot
Match: Q941I2 (Probable transcription factor KAN3 OS=Arabidopsis thaliana OX=3702 GN=KAN3 PE=2 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 2.1e-10 Identity = 63/182 (34.62%), Postives = 81/182 (44.51%), Query Frame = 0
BLAST of CaUC08G155000 vs. ExPASy Swiss-Prot
Match: Q9C616 (Probable transcription factor KAN2 OS=Arabidopsis thaliana OX=3702 GN=KAN2 PE=2 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 1.0e-07 Identity = 74/239 (30.96%), Postives = 110/239 (46.03%), Query Frame = 0
BLAST of CaUC08G155000 vs. ExPASy Swiss-Prot
Match: Q93WJ9 (Transcription repressor KAN1 OS=Arabidopsis thaliana OX=3702 GN=KAN1 PE=1 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 5.5e-06 Identity = 60/194 (30.93%), Postives = 90/194 (46.39%), Query Frame = 0
BLAST of CaUC08G155000 vs. ExPASy TrEMBL
Match: A0A1S3BAW6 (probable transcription factor KAN4 OS=Cucumis melo OX=3656 GN=LOC103487932 PE=4 SV=1) HSP 1 Score: 357.8 bits (917), Expect = 3.8e-95 Identity = 197/262 (75.19%), Postives = 208/262 (79.39%), Query Frame = 0
BLAST of CaUC08G155000 vs. ExPASy TrEMBL
Match: A0A0A0LP74 (SANT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G360740 PE=4 SV=1) HSP 1 Score: 349.7 bits (896), Expect = 1.0e-92 Identity = 191/262 (72.90%), Postives = 205/262 (78.24%), Query Frame = 0
BLAST of CaUC08G155000 vs. ExPASy TrEMBL
Match: A0A6J1KC48 (probable transcription factor KAN4 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111491957 PE=4 SV=1) HSP 1 Score: 256.9 bits (655), Expect = 9.2e-65 Identity = 151/252 (59.92%), Postives = 170/252 (67.46%), Query Frame = 0
BLAST of CaUC08G155000 vs. ExPASy TrEMBL
Match: A0A6J1HF90 (probable transcription factor KAN4 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111463005 PE=4 SV=1) HSP 1 Score: 256.1 bits (653), Expect = 1.6e-64 Identity = 150/252 (59.52%), Postives = 170/252 (67.46%), Query Frame = 0
BLAST of CaUC08G155000 vs. ExPASy TrEMBL
Match: A0A6J1K338 (probable transcription factor KAN4 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111491957 PE=4 SV=1) HSP 1 Score: 252.3 bits (643), Expect = 2.3e-63 Identity = 151/253 (59.68%), Postives = 170/253 (67.19%), Query Frame = 0
BLAST of CaUC08G155000 vs. TAIR 10
Match: AT5G42630.2 (Homeodomain-like superfamily protein ) HSP 1 Score: 92.4 bits (228), Expect = 5.8e-19 Identity = 53/120 (44.17%), Postives = 62/120 (51.67%), Query Frame = 0
BLAST of CaUC08G155000 vs. TAIR 10
Match: AT5G42630.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 91.7 bits (226), Expect = 9.9e-19 Identity = 76/218 (34.86%), Postives = 102/218 (46.79%), Query Frame = 0
BLAST of CaUC08G155000 vs. TAIR 10
Match: AT4G17695.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 67.8 bits (164), Expect = 1.5e-11 Identity = 63/182 (34.62%), Postives = 81/182 (44.51%), Query Frame = 0
BLAST of CaUC08G155000 vs. TAIR 10
Match: AT1G32240.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 58.9 bits (141), Expect = 7.1e-09 Identity = 74/239 (30.96%), Postives = 110/239 (46.03%), Query Frame = 0
BLAST of CaUC08G155000 vs. TAIR 10
Match: AT5G16560.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 53.1 bits (126), Expect = 3.9e-07 Identity = 60/194 (30.93%), Postives = 90/194 (46.39%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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