CaUC08G154680 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC08G154680
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Zinc finger and BTB domain-containing protein 47
Location	Ciama_Chr08: 26383837 .. 26384385 (+)
RNA-Seq Expression	CaUC08G154680
Synteny	CaUC08G154680

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTGACGTTTTTGGTGTCTTCTTCTACTTTTCTCCTAATTTATCCCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTCCCCTTTCTTCCAAACTCGGCTGATGGATTTCGCTTTGATTTTTTATTGAACAACCTTTCGATTCAGTGGGTTTTCTTTTGGGTTTCTTAGTTTCTCTTTCGTTTCCTTGTTTGTTTGATGGGTAAGAAGAAAACCCAGAAAACTAAGGAGATTGCAGTCGCCATAGCTGAAACCTCCACCTCCAAATTAGCCGATGATGGTATTGGCCAATCGATACAGCCCAGGAAAAGGGGCCGACCTCGTAAGGTTCTTGATGAACCACAAAACAAAGAGGAGAACAAGAAACTGCCGCCGCCGCTGCTGCCGGAAGTTGCAGAGAATCCACCGGAGAAGAAAGCTAAAACCACCGTAGATGAACCGCCGCCGGGTTCCATGGAAGAAGGTTCAAAACAAGAAGAACGCAAAACAGGGGATGGTTCGAGAAGCAGAGGAAGGCGAAAGAACAAACCCAGAAAAAGTAGC

mRNA sequence

TTTGACGTTTTTGGTGTCTTCTTCTACTTTTCTCCTAATTTATCCCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTCCCCTTTCTTCCAAACTCGGCTGATGGATTTCGCTTTGATTTTTTATTGAACAACCTTTCGATTCAGTGGTTTCTCTTTCGTTTCCTTGTTTGTTTGATGGGTAAGAAGAAAACCCAGAAAACTAAGGAGATTGCAGTCGCCATAGCTGAAACCTCCACCTCCAAATTAGCCGATGATGGTATTGGCCAATCGATACAGCCCAGGAAAAGGGGCCGACCTCGTAAGGTTCTTGATGAACCACAAAACAAAGAGGAGAACAAGAAACTGCCGCCGCCGCTGCTGCCGGAAGTTGCAGAGAATCCACCGGAGAAGAAAGCTAAAACCACCGTAGATGAACCGCCGCCGGGTTCCATGGAAGAAGGTTCAAAACAAGAAGAACGCAAAACAGGGGATGGTTCGAGAAGCAGAGGAAGGCGAAAGAACAAACCCAGAAAAAGTAGC

Coding sequence (CDS)

TTTGACGTTTTTGGTGTCTTCTTCTACTTTTCTCCTAATTTATCCCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTCCCCTTTCTTCCAAACTCGGCTGATGGATTTCGCTTTGATTTTTTATTGAACAACCTTTCGATTCAGTGGTTTCTCTTTCGTTTCCTTGTTTGTTTGATGGGTAAGAAGAAAACCCAGAAAACTAAGGAGATTGCAGTCGCCATAGCTGAAACCTCCACCTCCAAATTAGCCGATGATGGTATTGGCCAATCGATACAGCCCAGGAAAAGGGGCCGACCTCGTAAGGTTCTTGATGAACCACAAAACAAAGAGGAGAACAAGAAACTGCCGCCGCCGCTGCTGCCGGAAGTTGCAGAGAATCCACCGGAGAAGAAAGCTAAAACCACCGTAGATGAACCGCCGCCGGGTTCCATGGAAGAAGGTTCAAAACAAGAAGAACGCAAAACAGGGGATGGTTCGAGAAGCAGAGGAAGGCGAAAGAACAAACCCAGAAAAAGTAGC

Protein sequence

FDVFGVFFYFSPNLSPSSSSSSSSSSSSFPFLPNSADGFRFDFLLNNLSIQWFLFRFLVCLMGKKKTQKTKEIAVAIAETSTSKLADDGIGQSIQPRKRGRPRKVLDEPQNKEENKKLPPPLLPEVAENPPEKKAKTTVDEPPPGSMEEGSKQEERKTGDGSRSRGRRKNKPRKSS

Homology

[Close]

BLAST of CaUC08G154680 vs. NCBI nr
Match: KAA0065239.1 (zinc finger and BTB domain-containing protein 47 [Cucumis melo var. makuwa])

HSP 1 Score: 188.0 bits (476), Expect = 7.2e-44
Identity = 106/117 (90.60%), Postives = 110/117 (94.02%), Query Frame = 0


Query: 62  MGKKKTQKTKEIAVAIAETSTSKLADDGIGQSIQPRKRGRPRKVLDEPQNKEENKKL--P 121
           MGKKKTQKTKEIAVAIAETSTSKLADDGIGQSIQPRKRGRPRKVLDE QN++ENKKL  P
Sbjct: 1   MGKKKTQKTKEIAVAIAETSTSKLADDGIGQSIQPRKRGRPRKVLDEQQNEQENKKLPPP 60

Query: 122 PPLLPEVAENPPEKKAKTTVDEPPPGSMEEGSKQEERKTGDGSRSRGRRKNKPRKSS 177
           PPLLPEV ENPPEKK K TVDEPPPGS++EGSKQEE KTGDGSRSRGRRKNKPRKSS
Sbjct: 61  PPLLPEVEENPPEKKIKATVDEPPPGSVKEGSKQEEPKTGDGSRSRGRRKNKPRKSS 117

[Close]

BLAST of CaUC08G154680 vs. NCBI nr
Match: XP_038884964.1 (uncharacterized protein LOC120075548 [Benincasa hispida])

HSP 1 Score: 188.0 bits (476), Expect = 7.2e-44
Identity = 107/115 (93.04%), Postives = 109/115 (94.78%), Query Frame = 0


Query: 62  MGKKKTQKTKEIAVAIAETSTSKLADDGIGQSIQPRKRGRPRKVLDEPQNKEENKKLPPP 121
           MGKKK QKTKEIAVAIAETS SKLADDGIGQSIQPRKRGRPRKVLDEPQNK+ENKKL PP
Sbjct: 1   MGKKKPQKTKEIAVAIAETSASKLADDGIGQSIQPRKRGRPRKVLDEPQNKQENKKLLPP 60

Query: 122 LLPEVAENPPEKKAKTTVDEPPPGSMEEGSKQEERKTGDGSRSRGRRKNKPRKSS 177
            LPEVAENPPEKKAKTTVD+PPPGSMEEGSKQ E KTGDGSRSRGRRKNKPRKSS
Sbjct: 61  -LPEVAENPPEKKAKTTVDQPPPGSMEEGSKQGEPKTGDGSRSRGRRKNKPRKSS 114

[Close]

BLAST of CaUC08G154680 vs. NCBI nr
Match: KGN62596.1 (hypothetical protein Csa_022088 [Cucumis sativus])

HSP 1 Score: 163.3 bits (412), Expect = 1.9e-36
Identity = 99/116 (85.34%), Postives = 104/116 (89.66%), Query Frame = 0


Query: 62  MGKKKTQKTKEIAVAIAETSTSKLADDG-IGQSIQPRKRGRPRKVLDEPQNKEENKKLPP 121
           MGKKKTQKTKEIAVAIAETSTSKLADDG IGQ IQPRKRGRPRKVL+E QN++E+KK PP
Sbjct: 1   MGKKKTQKTKEIAVAIAETSTSKLADDGIIGQPIQPRKRGRPRKVLEEQQNEQESKKPPP 60

Query: 122 PLLPEVAENPPEKKAKTTVDEPPPGSMEEGSKQEERKTGDGSRSRGRRKNKPRKSS 177
           PLL EVAENPPEKK K TVDE   GSM EGSK+EE KTGDGSRSRGRRKNKPRKSS
Sbjct: 61  PLL-EVAENPPEKKIKGTVDEAALGSMIEGSKEEEPKTGDGSRSRGRRKNKPRKSS 115

[Close]

BLAST of CaUC08G154680 vs. NCBI nr
Match: XP_023002541.1 (uncharacterized protein LOC111496353 [Cucurbita maxima])

HSP 1 Score: 132.9 bits (333), Expect = 2.7e-27
Identity = 96/143 (67.13%), Postives = 105/143 (73.43%), Query Frame = 0


Query: 41  FDFLLNNLSIQWFLFRFLVCLMGKKKTQKTKEIAVAIAETSTSKLADD----GIGQSIQP 100
           F F   NLS+  F   F V LMGKKKTQKTK+I+VAIAETSTSKL DD    G GQS QP
Sbjct: 15  FLFFFFNLSLTPF---FAVYLMGKKKTQKTKQISVAIAETSTSKLPDDGGGHGGGQSEQP 74

Query: 101 RKRGRPRKVLDEPQNKEENKKLPPPLLPEVAENPPEKKAKTTVDEPPPGSMEEGSKQ--- 160
           RKRGRPRKVLDEP    ++KKL PP   +VA+ P +KK KTT DEPP  SME  SKQ   
Sbjct: 75  RKRGRPRKVLDEP---PDDKKLLPPPAADVADKPLQKKGKTTGDEPPI-SMEGASKQQES 134

Query: 161 EERKTGDGSRSRGRRKNKPRKSS 177
           EE K+GDGSRSRGRRKNKPRKSS
Sbjct: 135 EEPKSGDGSRSRGRRKNKPRKSS 150

[Close]

BLAST of CaUC08G154680 vs. NCBI nr
Match: KAG7020516.1 (hypothetical protein SDJN02_17201, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 128.6 bits (322), Expect = 5.2e-26
Identity = 87/122 (71.31%), Postives = 97/122 (79.51%), Query Frame = 0


Query: 62  MGKKKTQKTKEIAVAIAETSTSKLADD----GIGQSIQPRKRGRPRKVLDEPQNKEENKK 121
           MGKKKTQKTK+I+VAIAETSTSKL DD    G GQS+QPRKRGRPRKVLDEP    ++KK
Sbjct: 1   MGKKKTQKTKQISVAIAETSTSKLPDDGGAHGGGQSVQPRKRGRPRKVLDEP---PDDKK 60

Query: 122 LPPPLLPEVAENPPEKKAKTTVDEPPPGSMEEGSKQ---EERKTGDGSRSRGRRKNKPRK 177
           LPPP   +VA+ P +KK K+T DE PP SME  SKQ   EE K+GDGSRSRGRRKNKPRK
Sbjct: 61  LPPP-PADVADKPLQKKGKSTGDE-PPDSMEGASKQHESEEPKSGDGSRSRGRRKNKPRK 117

[Close]

BLAST of CaUC08G154680 vs. ExPASy TrEMBL
Match: A0A5A7VIE6 (Zinc finger and BTB domain-containing protein 47 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G005800 PE=4 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 3.5e-44
Identity = 106/117 (90.60%), Postives = 110/117 (94.02%), Query Frame = 0


Query: 62  MGKKKTQKTKEIAVAIAETSTSKLADDGIGQSIQPRKRGRPRKVLDEPQNKEENKKL--P 121
           MGKKKTQKTKEIAVAIAETSTSKLADDGIGQSIQPRKRGRPRKVLDE QN++ENKKL  P
Sbjct: 1   MGKKKTQKTKEIAVAIAETSTSKLADDGIGQSIQPRKRGRPRKVLDEQQNEQENKKLPPP 60

Query: 122 PPLLPEVAENPPEKKAKTTVDEPPPGSMEEGSKQEERKTGDGSRSRGRRKNKPRKSS 177
           PPLLPEV ENPPEKK K TVDEPPPGS++EGSKQEE KTGDGSRSRGRRKNKPRKSS
Sbjct: 61  PPLLPEVEENPPEKKIKATVDEPPPGSVKEGSKQEEPKTGDGSRSRGRRKNKPRKSS 117

[Close]

BLAST of CaUC08G154680 vs. ExPASy TrEMBL
Match: A0A0A0LRH2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G361610 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 9.1e-37
Identity = 99/116 (85.34%), Postives = 104/116 (89.66%), Query Frame = 0


Query: 62  MGKKKTQKTKEIAVAIAETSTSKLADDG-IGQSIQPRKRGRPRKVLDEPQNKEENKKLPP 121
           MGKKKTQKTKEIAVAIAETSTSKLADDG IGQ IQPRKRGRPRKVL+E QN++E+KK PP
Sbjct: 1   MGKKKTQKTKEIAVAIAETSTSKLADDGIIGQPIQPRKRGRPRKVLEEQQNEQESKKPPP 60

Query: 122 PLLPEVAENPPEKKAKTTVDEPPPGSMEEGSKQEERKTGDGSRSRGRRKNKPRKSS 177
           PLL EVAENPPEKK K TVDE   GSM EGSK+EE KTGDGSRSRGRRKNKPRKSS
Sbjct: 61  PLL-EVAENPPEKKIKGTVDEAALGSMIEGSKEEEPKTGDGSRSRGRRKNKPRKSS 115

[Close]

BLAST of CaUC08G154680 vs. ExPASy TrEMBL
Match: A0A6J1KLK8 (uncharacterized protein LOC111496353 OS=Cucurbita maxima OX=3661 GN=LOC111496353 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 1.3e-27
Identity = 96/143 (67.13%), Postives = 105/143 (73.43%), Query Frame = 0


Query: 41  FDFLLNNLSIQWFLFRFLVCLMGKKKTQKTKEIAVAIAETSTSKLADD----GIGQSIQP 100
           F F   NLS+  F   F V LMGKKKTQKTK+I+VAIAETSTSKL DD    G GQS QP
Sbjct: 15  FLFFFFNLSLTPF---FAVYLMGKKKTQKTKQISVAIAETSTSKLPDDGGGHGGGQSEQP 74

Query: 101 RKRGRPRKVLDEPQNKEENKKLPPPLLPEVAENPPEKKAKTTVDEPPPGSMEEGSKQ--- 160
           RKRGRPRKVLDEP    ++KKL PP   +VA+ P +KK KTT DEPP  SME  SKQ   
Sbjct: 75  RKRGRPRKVLDEP---PDDKKLLPPPAADVADKPLQKKGKTTGDEPPI-SMEGASKQQES 134

Query: 161 EERKTGDGSRSRGRRKNKPRKSS 177
           EE K+GDGSRSRGRRKNKPRKSS
Sbjct: 135 EEPKSGDGSRSRGRRKNKPRKSS 150

[Close]

BLAST of CaUC08G154680 vs. ExPASy TrEMBL
Match: A0A251R9L0 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G379600 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 5.8e-07
Identity = 59/137 (43.07%), Postives = 76/137 (55.47%), Query Frame = 0


Query: 62  MGKKKTQKTKEIAVAIAETSTSKLADDGIGQS----IQPRKRGRPRKVLDEPQNKEENKK 121
           MGKKK QKTKE++VAIAE  ++   D+G  QS      PRKRGRPRK++++ ++ EE   
Sbjct: 1   MGKKKPQKTKELSVAIAEAPST--GDEGQQQSQPQPHTPRKRGRPRKIIEKTESTEEQST 60

Query: 122 LPPPLLPEVAENPPE--KKAKTTVD----------------EPPPGSMEEGSKQEERKTG 177
                    AE+  E  KKAK T D                EP   S+  G+K+EE +  
Sbjct: 61  PQTEEAAAAAEDVEEQSKKAKATEDEDQQEEEQQEQPKIKEEPSSASVRGGAKKEEGQAR 120

[Close]

BLAST of CaUC08G154680 vs. ExPASy TrEMBL
Match: A0A314ZHL5 (Neuromodulin OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_07055 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 7.5e-07
Identity = 59/138 (42.75%), Postives = 76/138 (55.07%), Query Frame = 0


Query: 62  MGKKKTQKTKEIAVAIAETSTSKLADDGIGQS----IQPRKRGRPRKVLDEPQNKEENKK 121
           MGKKK QKTKE++VAIAE  ++   D+G  QS      PRKRGRPRK++++ ++ EE   
Sbjct: 1   MGKKKPQKTKELSVAIAEAPST--GDEGQQQSQPQPHTPRKRGRPRKIIEKTESTEEQST 60

Query: 122 LPPPLLPEVAENPPE--KKAKTTVD-----------------EPPPGSMEEGSKQEERKT 177
                    AE+  E  KKAK T D                 EP   S+  G+K+EE + 
Sbjct: 61  PQTEEAAAAAEDVEEQSKKAKATEDEDQQQEEQQEQPKIKEEEPSSASVRGGAKKEEGQA 120

The following BLAST results are available for this feature:

BLAST of CaUC08G154680 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0065239.1	7.2e-44	90.60	zinc finger and BTB domain-containing protein 47 [Cucumis melo var. makuwa]	[more]
XP_038884964.1	7.2e-44	93.04	uncharacterized protein LOC120075548 [Benincasa hispida]	[more]
KGN62596.1	1.9e-36	85.34	hypothetical protein Csa_022088 [Cucumis sativus]	[more]
XP_023002541.1	2.7e-27	67.13	uncharacterized protein LOC111496353 [Cucurbita maxima]	[more]
KAG7020516.1	5.2e-26	71.31	hypothetical protein SDJN02_17201, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of CaUC08G154680 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CaUC08G154680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VIE6	3.5e-44	90.60	Zinc finger and BTB domain-containing protein 47 OS=Cucumis melo var. makuwa OX=...	[more]
A0A0A0LRH2	9.1e-37	85.34	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G361610 PE=4 SV=1	[more]
A0A6J1KLK8	1.3e-27	67.13	uncharacterized protein LOC111496353 OS=Cucurbita maxima OX=3661 GN=LOC111496353...	[more]
A0A251R9L0	5.8e-07	43.07	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G379600 PE=4 SV=1	[more]
A0A314ZHL5	7.5e-07	42.75	Neuromodulin OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_07055 PE=4 SV=...	[more]

BLAST of CaUC08G154680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 100..119
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 147..162
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 84..176
None	No IPR available	PANTHER	PTHR37615	NUCLEOPORIN NUP159-LIKE	coord: 62..176

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC08G154680.1	CaUC08G154680.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane