CaUC08G153670 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC08G153670
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionComplex 1 LYR protein
LocationCiama_Chr08: 25393574 .. 25400927 (+)
RNA-Seq ExpressionCaUC08G153670
SyntenyCaUC08G153670
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTCATGTTAAAAAGATTGATATGATAATTATTTTGTAATGTTGTATAATTTACAATACATTATATAATACATATTTTAATTTTCATAAATGAATTAGGTTTATAACATGATACTTTAATACATATTTCAATAAATTTGATTTTTGTTTAATCAAATTTTTTTTTGTTGAAAATTAAACTTACCAACACTACTTCTTCATTCAAATTTCTTTTTTTTTTGTTATCTACTTCTTACTAATGGTTTAAAAACCAAGCAAAAATTTGAAAACTAAAAAAAATAGTTTTTAAAAACTTTTTTTAAAAAAAAAAAATTAGTCAAGAATTCAACTATTGTACTAAATAAAGATGCAAATCACGGTGACAAATGGAGAAAAATATGCTTAATTTTTAAAAACTAAAAACTAAAAACAAAATGGTTACAAATAGGGCCTAAATAAATTCAGTTGAAACAAATTAAAATATTCACACACTTTTTATTGAATGAAATGTCACACCCTACTTTTAAGAAACTGATGCGTTGAAGAGTCTATGAAGAAAACAAGTAAAAGACCATGTTGGACGCATGGTCAGGACCAAGGTAACGCATGGTATGGGTGGATGCATGGAAGTAAACCGAGAAGGGAAGAAGTGAAACGCATTGGCGATGGTAAGACGCTTAAGCAAGAATAAAGTTATGTCGTGGAATGATTAACGAGATCTAAGTTTCGGAAAGGTAGAATACTATAGCAAAATGAGTAACGCATAGATAAGCAGCAAGGGATGTTCTTAGGTGTTGGACAAAGTGGAAGGTGAGAAGAAAGCCTAAAGATTTGAAACAAGAGGTGGACGCATACCACTTTATTATCAGAAGAAATATTTCAATACAAGGAAAAGGTTAAATGAAGAACCTTGGATTATAAGCACAAGAACGCATAGAGGGATACTCAAGAAATCCTCAAGGATAGGAGAAAGATCATGGATGCATGATAGTATGCAGTTCAGGCTGACGCATGGTATTATGCGGTAAGACAAACGCATAGTAGTGTGCGTTGAGACGTTGACGCCTAGTAGTATGCGGTGGAAAAACGAGTTCAAAGGATGTATGGCCGAGAGTTAGAAAAGTGAGTAGTGAAGCTCAAACCTTAAAAGAAACTCAATGAATGCATGGGGGCGTTGTATTGAATGAATAGTTGCTTATTGGAAAATGTTGGACGCATAAGATAAGCTTACAAAGGCTAGGTGGCTTCATATAGACTTGACACCTTAAAAGTAAGAGGTGTTAAAAAGGCATGTTAAGTGTTTCATGCAAGGTGACGCTTGGATTAATGCATGGCTAATTAAGCATACAGCGTGACATGTGGCAAACAAGTGGCAAAAGGAGAGGAGAAGTTGAATGGCAAGCTCCCTATAAATAGAACTTTGAGGGAAAAGGAGCGACTGATGACTCTGAAAGAAAAATCCTAGAGAGAAAGGGAAGAAAGAAGGTAGAAAGAAGGAATCCTTGCGTCTGTAGTAGGAGTCTACGGCCAAGAGAGAAGATATTTTTGACAACTTAGTTATTTTATGTAAAAGAAGTTGTCTTGCGTCGAAAGGGGGGTCGGCCTTGTGGTAAAGACAAACACTACGTTCAAGGTGAACGTGGCGTCCAAAGTTAGGTGATGCGTTCAAGTTGGACTTTGCGTCCAAGAGAGGGCAACGCATCCGAAAAAGAAGTAAGAAGAGTTGGGATGCACTTTGCGGAAGTAATCAACCTTGCGTTGAAGGGCAGGGTTTGCGGTAGTTATCAACCTTGCGTTGAAGGGCAGGGTTGCGTTCAACCGAGCTGACAGAGGAAAATGGAGCCTTGCGTCTCTGAGATTAGAACGCTGCGTCCAAGAAGCTCGGGAAGAGGAAATAGAGGAAAGGAAGAGGAATTATTCTTTGGCAAGTACAGGTGAGTAACACCTGCGTTTTACAAAATATAAATGAGTTCCTTATGAATATGATTTCATGGGTTTTCAATGAAAAAAAATGCATGCGTTTTACTTGAAAACTTTGAGTTATGCTGGTTACTTGCTATGAAACGCATGGTGATTGATTGATACTTGTTTTCATGATTTTTCTGAAAAGCATGGTATTATATGATTTCAAGAAAGATTTGAAAATAAACTTGTATGAAAAGCATGCTGTATGATATATAAGTTGGAAATTGAATTTAGCATGCTGATGATGTGAGATTTGGAAATGGTTAATTTATGAGTTATTAATATAATATTTCCAAAATATGTATGGTGTTTTATAAAACTTTGAAAAGGGACCCCAATGCTCAGGGACTCGTAGAAGGCATTGTGGGCGACCCAAATTATAAAGGTAACCCATGGCTGAGGGACCTCGTGTGAAGGCCTATGGGGAAATATGTTATATGGTACTCAGTGCTGAGGGACCACGTGAGAAGGCACTTGAGTAGTTGGATGGGACGGATTCCAGTGCTGAGGGACCTTGTGTGAAGGCATATGGAAATCCAAAACATGATAGCCAAATGCTGAGGGACCACGAGTGAAGACACTTGAGCAGTGGATTGGCAGTGAAACTCAGTGCTGAGGGACTATATGTGAAGGCACTTGAGGGTTTGAAAATGCCGAGGGACGAAGTGTGAAGGCATTTGAATATGTGATTAAGGAAAATCGACGTTGAGGAGCGTAGAGCATTGCTCCGCCTCAACTAGGGAAAAATGATTATGGAATGAATGGAGTTTTGAGTATTTACCCTAAAACAGACAGTCATATTTTATAATGGCATTTGAGCATAATTTAATATGATTTGAAGTGTTATATTTTCTGCGAGTTCGATCAGTTTACAGATTAAAGTATAATGTTTTCAGAAAACTGTTACTCACTGAGCTGTTAGCTCACCCTTTTTATATGTTTTTCATTTTCAGGTAGCATGACAGTTCCCGTTGCCGATCGAAGTCGAGGTTTGTCAAGAGTGTGTTAATGGTATGACCGTCCTAGGGAGGATTTTTATGAAAGTGAGGTAAATGTGACAGTAATATATGTGACAGGGTAGTCGGTACTACTGTTCTCATGCTCCGTCTCGGACTACGGGAGGGTAGTTCGAGGTGGGGTGTGACAGTAAATGTGACAGTAATATATGTGACAGGGTAATCGATACTACTGTTCTCACCCTCCGTCTCGGGCTATGGGAGGGTAGTTCGGGGTGGGGTGTCTTCATCTAGAAAAAAAAGAACACAAGATAATTTAAAGATTAGACAAATTAGAGAGTAAAGCATAATTCACCCATGGAGGATGATTTTCAAGCCAAAATTTTAAAATTAAAAATTTCGAACCTAAAAAGCTAGGACATGAATATAGTTACACTTGCACTTTAACAAAAAGGGAGTCTTAAATGGAACGACATCCTGCAAATTGTAGAGAGAATCAACCAAAATTTAAGCTAATCACCAAATTCAGAGTTTAAATTGTTTGAAGTATTAGTCTAAAATTTAATTGATAATTAGGGGTATAATTTATAAAAATCGATATTTTCGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCTCCGTTATAACCTATAAGTTTAGAAATAAGAATGTTTTTCTTTTTTAAAAATTAAAATTGTTCGGCAATACCATGTTTACCCTTCCGTTTCTCCATTTTTTAGTTCTCGCGAGCTCCTCCCTTCGTCAATCTCTCTCCTCGAAAATCGCTTCTCTCTGTTCCTTCCCGTTTATCCGATCAATCGGCCCTTCCCTCAATATTCCTTCGCTTCGCTGCTTCAAGGTTTGTTCATGATTTTCTTTTCCTTTGAGATTCTGTTGTGTTAGGTTGCTGAAATCGCGATTGGATGTTCATTTCTGTATTATTGTTCCCTATATCTCTCTAACAGTTCCCAAATCTTATTCCGGTGTAATAAATCACAGAGTAATTAGCATTGAATGTCAACGTTCTTTCAGCATGAGCATCTAATGAGGATTTGAAGATTATAATTGCTGTTTTGTTTATTACTTTGCACTTTTGTGAAATTCTGGTGTTCATCACTTTATTCTGGGTTGAATACGGTGGATTTAGCGATTGGATGTTACAATTCCTTCTGGACACTGTTTTTGTAGTTATGGATTAACGACTGTAGATTGTATTTTAGCACTATCATATTGCTAGAGGTTTGATTATCAGTTTGATTAGTTGCAAGGTATAACTTATAGTTATAACATTGATGGTGTGGTGTGGCCGAACTTCTAAATTTCGTAATAATTATAACTTATGAATAACGTTCGTGGCATTTTGAGTTTCGATGGAGAGAGGTAAGTATTGACATGTTTTGGATCTATAATAATGTAGGTATGACTTGGTTTGTAAGTGGTAATCGCCGTACTTTTTCTTTAGAAAACCTGAATCCGTTTTTGTATTCCTTCCGAAGCCATTTGCATTGATCCATGATATCTTTTATTTCGCACGAGAACCTCAGTAACTTCAGCACCAACTCTAAATCCAGATTCTGGTAAAAATTGATGCTCTAATGCCAATTGATAGGACCTTGATTTTGCAAGAGAATTCTGACAGAAAATAACACCGAGTTTGTGTTACCATGTTAGATGGAAATTACCCTACTGAACCCCAAACACTTCAAGATGCTTGGACTCCCCCATAGGCTTTTTAGAGACTATGGTATGGCTTTTTGGTTTGTAAAAAATGTTCTACTTACATGAAGTGTCAATTTATTTCGCTAAAATTGTTTGGTTTGTGCTGTGCAACTAAATGGAATTTCATAGGTATTATGATATCCATGGAGATCTTTTTTCGACTCCATGTGGCCTTTTCCTTGGGGAGCAAATGACATTTCCGTATATCTTTCACAGAATTTGTATAAACTATTTTTAGTGCACTTTCTCAATTCAACCTGCCTTTTCACTCTTCTTCTTGCCTTCCCATGATCTTTCCGTTGGTACTTTGCAGGAAAGTACATCTGTCAGTGTCTTGAGGCATTAGTACTATAAGCAAAGTTGTTCACAATCATGATAGAGTTTATTGAGGTTGCTGTCCACACACAGACCAGATCCTAAGTAAATCATTCGACATTGTCCCTTTGAGCGCCAAAGGACATAGTTAAGTCATCCAGTTGACCTATGCAGTGGTGCAGAGATGACCATGAGGTTGGTAGGAAAATGTCTTAACCTTTCAATTCATAAAAATTTTCTGACTTGCTATAAAATTGGTTTCCACCCTCGAGCTCTGCATAATGGTCCAGACACAATAGATGAACTCTTAGACAGACATGTGGTTAAGAAAGAACAGTCCTTCGATGATGAAGATGATGAATTGATAACTCAGCGACGCCTCACCAGCACCCGACGTGAGGCTCTAAGTCTCTACAGAGACATTCTCCGGGCAACTCGATTCTTTATGTGGGCAGATTCTCGAGGTGTCTTGTGGCGAGATGTTCTCCGGCAGAATGCACGGAAGGAGTTTGAGGATGCTCGCTATGAGTCTGATCCAGAAATGGTGACCCGACTTCTGATTGGTGGGCGGGATGCAGTGCAGTCAGCTCTTGACAAGCTTGCTGAGAAGCAGATGCAGGAGATTGATAAGAAACAAAGTGGTTGAGATCAACTCTGATTTATTATATGGTAATTCAGTAATTCTTGTCGCATCTGCTATTGCAATTGAAAAGGAAGTTAGGCTAGCCCTTTGTTCTGTATTTGGTTCTAATGAATCGAAAGGGTATTTTACTTATAAATTACATTGGAGTTCTGATCTTTTTCCAGGATGACGTTGAGCTTTATCAGAAAGGAATTGAACTGGTTGCTAAGAAAATGAAGGTAAAAGGAAAGGCAGAAATTGAACTCGTCTTTTATGTTGGGTTGCTTGAACTCTTTTAGCTTGTATAGACGTGGCAATCCTGAAGCGAGAGCTTAAATGTGGATCTTCTAAACTCTCAACTGCAGGACAGATCACTACACCATTTATTAGGGATCGTCTATTGCTTGACACTTCATCAGCTCGATCTCTGATGTTGGTTGGTAGCAACTCATGCCCTCCATATCTTTAGTAACGAGTCATCAACTTCTGACTTAATGCAATATTTATCGCCGTATACCACAATGCATCATTGTTTTCGGGTTAGTCAAAAGGTTGGCAGTGGCCCAATTTTGAATGTGGGATTCTCTGAATAATCCGAGCTGTACTTTGCTGTTTGGGGAAAAATTCTAGTGCTACGGTAGCACTAGAAATTTCCTCGCTGTTTGGAATTGTGTTCCTACCACCCGTATACTTGGCCTTCCCTAGTTACTCACCCACTCTTGCTGCAGTTTAGGGCTCCTTGGAAAATGAGTTTACCCTGAGTCATTAAATTTAGGTTTAAATGTAAGCTTTTGAAAATTGGTGGCTTTTTCTTTATTAAATATTTAGAAAATATTGCAGAATGGTCTGTTTTCGTTCCTTTCTCGTCTGTCCTTATAATAGCTAGGGAAATGATAAAGAAGAGCAGACATTGTGTGTCTACTGTCTAGTCTAGAGATGATTATATGAATGCAATGCCAGTTTCTACTAATGGTTTCTTAGAGGAAGGGTTGTGATCGTATATTTCTCATGGACGAGGAAAGTTTAAATAAGCACATTGAGAAACTCGAAGCTAATGGGGTGAAGAACGTTTGA

mRNA sequence

ATGTCTCATTTCTCGCGAGCTCCTCCCTTCGTCAATCTCTCTCCTCGAAAATCGCTTCTCTCTGTTCCTTCCCGTTTATCCGATCAATCGGCCCTTCCCTCAATATTCCTTCGCTTCGCTGCTTCAAGTGGTGCAGAGATGACCATGAGGTTGGTAGGAAAATGTCTTAACCTTTCAATTCATAAAAATTTTCTGACTTGCTATAAAATTGGTTTCCACCCTCGAGCTCTGCATAATGGTCCAGACACAATAGATGAACTCTTAGACAGACATGTGGTTAAGAAAGAACAGTCCTTCGATGATGAAGATGATGAATTGATAACTCAGCGACGCCTCACCAGCACCCGACGTGAGGCTCTAAGTCTCTACAGAGACATTCTCCGGGCAACTCGATTCTTTATGTGGGCAGATTCTCGAGGTGTCTTGTGGCGAGATGTTCTCCGGCAGAATGCACGGAAGGAGTTTGAGGATGCTCGCTATGAGTCTGATCCAGAAATGGTGACCCGACTTCTGATTGGTGGGCGGGATGCAGTGCAGTCAGCTCTTGACAAGCTTGCTGAGAAGCAGATGCAGGAGATTGATAAGAAACAAATAATTCTTGTCGCATCTGCTATTGCAATTGAAAAGGAAGTTAGGCTAGCCCTTTGTTCTGATGACGTTGAGCTTTATCAGAAAGGAATTGAACTGGTTGCTAAGAAAATGAAGGGTTGTGATCGTATATTTCTCATGGACGAGGAAAGTTTAAATAAGCACATTGAGAAACTCGAAGCTAATGGGGTGAAGAACGTTTGA

Coding sequence (CDS)

ATGTCTCATTTCTCGCGAGCTCCTCCCTTCGTCAATCTCTCTCCTCGAAAATCGCTTCTCTCTGTTCCTTCCCGTTTATCCGATCAATCGGCCCTTCCCTCAATATTCCTTCGCTTCGCTGCTTCAAGTGGTGCAGAGATGACCATGAGGTTGGTAGGAAAATGTCTTAACCTTTCAATTCATAAAAATTTTCTGACTTGCTATAAAATTGGTTTCCACCCTCGAGCTCTGCATAATGGTCCAGACACAATAGATGAACTCTTAGACAGACATGTGGTTAAGAAAGAACAGTCCTTCGATGATGAAGATGATGAATTGATAACTCAGCGACGCCTCACCAGCACCCGACGTGAGGCTCTAAGTCTCTACAGAGACATTCTCCGGGCAACTCGATTCTTTATGTGGGCAGATTCTCGAGGTGTCTTGTGGCGAGATGTTCTCCGGCAGAATGCACGGAAGGAGTTTGAGGATGCTCGCTATGAGTCTGATCCAGAAATGGTGACCCGACTTCTGATTGGTGGGCGGGATGCAGTGCAGTCAGCTCTTGACAAGCTTGCTGAGAAGCAGATGCAGGAGATTGATAAGAAACAAATAATTCTTGTCGCATCTGCTATTGCAATTGAAAAGGAAGTTAGGCTAGCCCTTTGTTCTGATGACGTTGAGCTTTATCAGAAAGGAATTGAACTGGTTGCTAAGAAAATGAAGGGTTGTGATCGTATATTTCTCATGGACGAGGAAAGTTTAAATAAGCACATTGAGAAACTCGAAGCTAATGGGGTGAAGAACGTTTGA

Protein sequence

MSHFSRAPPFVNLSPRKSLLSVPSRLSDQSALPSIFLRFAASSGAEMTMRLVGKCLNLSIHKNFLTCYKIGFHPRALHNGPDTIDELLDRHVVKKEQSFDDEDDELITQRRLTSTRREALSLYRDILRATRFFMWADSRGVLWRDVLRQNARKEFEDARYESDPEMVTRLLIGGRDAVQSALDKLAEKQMQEIDKKQIILVASAIAIEKEVRLALCSDDVELYQKGIELVAKKMKGCDRIFLMDEESLNKHIEKLEANGVKNV
Homology
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BLAST of CaUC08G153670 vs. NCBI nr
Match: XP_022144304.1 (uncharacterized protein LOC111014019 [Momordica charantia])

HSP 1 Score: 287.7 bits (735), Expect = 9.9e-74
Identity = 142/155 (91.61%), Postives = 150/155 (96.77%), Query Frame = 0 

Query: 43  SGAEMTMRLVGKCLNLSIHKNFLTCYKIGFHPRALHNGPDTIDELLDRHVVKKEQSFDDE 102
           SGAEMT+RLVGKCLNLSIHK+FL C KIGFHPR LHNGPDTIDELLDRHVVKKE+SF+DE
Sbjct: 5   SGAEMTIRLVGKCLNLSIHKHFLACNKIGFHPRVLHNGPDTIDELLDRHVVKKEKSFNDE 64

Query: 103 DDELITQRRLTSTRREALSLYRDILRATRFFMWADSRGVLWRDVLRQNARKEFEDARYES 162
           DDELITQR LTSTRREALSLYRDI+RATRFFMW DSRGVLWRDVLR+NARKEFE+ARYES
Sbjct: 65  DDELITQRHLTSTRREALSLYRDIIRATRFFMWPDSRGVLWRDVLRENARKEFEEARYES 124

Query: 163 DPEMVTRLLIGGRDAVQSALDKLAEKQMQEIDKKQ 198
           DPE+VTRLLIGGRDAVQSALDKLAEKQMQEIDKKQ
Sbjct: 125 DPEVVTRLLIGGRDAVQSALDKLAEKQMQEIDKKQ 159

[Close]
BLAST of CaUC08G153670 vs. NCBI nr
Match: XP_038884246.1 (uncharacterized protein LOC120075144 [Benincasa hispida])

HSP 1 Score: 282.7 bits (722), Expect = 3.2e-72
Identity = 140/149 (93.96%), Postives = 145/149 (97.32%), Query Frame = 0 

Query: 49  MRLVGKCLNLSIHKNFLTCYKIGFHPRALHNGPDTIDELLDRHVVKKEQSFDDEDDELIT 108
           MRLVGKCLNLSIHKNFLTC KIGFHPR LHNGPDT+ ELLDRHVVKKE+SFDDE+DELIT
Sbjct: 1   MRLVGKCLNLSIHKNFLTCNKIGFHPRVLHNGPDTVAELLDRHVVKKEKSFDDEEDELIT 60

Query: 109 QRRLTSTRREALSLYRDILRATRFFMWADSRGVLWRDVLRQNARKEFEDARYESDPEMVT 168
           QRRLT+TRREALSLYRDILRATRFFMW DSRGVLWRDVLRQNARKEFEDARYESDPE+VT
Sbjct: 61  QRRLTTTRREALSLYRDILRATRFFMWPDSRGVLWRDVLRQNARKEFEDARYESDPEIVT 120

Query: 169 RLLIGGRDAVQSALDKLAEKQMQEIDKKQ 198
           RLLIGGRDAVQSALDKLAEKQMQEIDKKQ
Sbjct: 121 RLLIGGRDAVQSALDKLAEKQMQEIDKKQ 149

[Close]
BLAST of CaUC08G153670 vs. NCBI nr
Match: KAG7029455.1 (hypothetical protein SDJN02_07794, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 271.9 bits (694), Expect = 5.6e-69
Identity = 134/151 (88.74%), Postives = 144/151 (95.36%), Query Frame = 0 

Query: 47  MTMRLVGKCLNLSIHKNFLTCYKIGFHPRALHNGPDTIDELLDRHVVKKEQSFDDEDDEL 106
           M+MRLV KC+ LS HKNFL C KIG+HPRALHNGPDTIDELLDRHVVKKE+SFDD+++EL
Sbjct: 1   MSMRLVEKCVKLSTHKNFLACNKIGYHPRALHNGPDTIDELLDRHVVKKEKSFDDDEEEL 60

Query: 107 ITQRRLTSTRREALSLYRDILRATRFFMWADSRGVLWRDVLRQNARKEFEDARYESDPEM 166
           ITQRRLTSTRREALSLYRDILRATRFFMW DSRGVLWRDVLRQNARKEFEDAR+E+DPE+
Sbjct: 61  ITQRRLTSTRREALSLYRDILRATRFFMWPDSRGVLWRDVLRQNARKEFEDARFETDPEI 120

Query: 167 VTRLLIGGRDAVQSALDKLAEKQMQEIDKKQ 198
           VTRLLIGGRDAVQSALDKLAEKQ QEIDKKQ
Sbjct: 121 VTRLLIGGRDAVQSALDKLAEKQRQEIDKKQ 151

[Close]
BLAST of CaUC08G153670 vs. NCBI nr
Match: XP_031736624.1 (uncharacterized protein LOC101214249 [Cucumis sativus] >KGN62269.1 hypothetical protein Csa_018772 [Cucumis sativus])

HSP 1 Score: 270.8 bits (691), Expect = 1.3e-68
Identity = 137/152 (90.13%), Postives = 144/152 (94.74%), Query Frame = 0 

Query: 47  MTMRLVGKCLNL-SIHKNFLTCYKIGFHPRALHNGPDTIDELLDRHVVKKEQSFDDEDDE 106
           MTMRLVGK LNL SIHKNFLTC KIGFHPR LHNGPDT++ELLDRHVVKKE+ FDDEDD+
Sbjct: 1   MTMRLVGKYLNLSSIHKNFLTCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKFFDDEDDK 60

Query: 107 LITQRRLTSTRREALSLYRDILRATRFFMWADSRGVLWRDVLRQNARKEFEDARYESDPE 166
           LITQRRLT+TRREALSLYRDILRATRFFMW DSRGVLWRDVLR+NARKEFEDAR ESDPE
Sbjct: 61  LITQRRLTTTRREALSLYRDILRATRFFMWPDSRGVLWRDVLRENARKEFEDARLESDPE 120

Query: 167 MVTRLLIGGRDAVQSALDKLAEKQMQEIDKKQ 198
           MVTRLLIGGRDAVQSALDKLAEKQ +EIDKKQ
Sbjct: 121 MVTRLLIGGRDAVQSALDKLAEKQREEIDKKQ 152

[Close]
BLAST of CaUC08G153670 vs. NCBI nr
Match: XP_022961619.1 (uncharacterized protein LOC111462339 [Cucurbita moschata] >XP_022961620.1 uncharacterized protein LOC111462339 [Cucurbita moschata] >KAG6598519.1 hypothetical protein SDJN03_08297, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 270.8 bits (691), Expect = 1.3e-68
Identity = 133/151 (88.08%), Postives = 143/151 (94.70%), Query Frame = 0 

Query: 47  MTMRLVGKCLNLSIHKNFLTCYKIGFHPRALHNGPDTIDELLDRHVVKKEQSFDDEDDEL 106
           M+MRLV KC+ LS HKNFL C K+GFHPR LHNGPDTIDELLDRHVVKKE+SFDD+++EL
Sbjct: 1   MSMRLVEKCVKLSTHKNFLACNKVGFHPRLLHNGPDTIDELLDRHVVKKEKSFDDDEEEL 60

Query: 107 ITQRRLTSTRREALSLYRDILRATRFFMWADSRGVLWRDVLRQNARKEFEDARYESDPEM 166
           ITQRRLTSTRREALSLYRDILRATRFFMW DSRGVLWRDVLRQNARKEFEDAR+E+DPE+
Sbjct: 61  ITQRRLTSTRREALSLYRDILRATRFFMWPDSRGVLWRDVLRQNARKEFEDARFETDPEI 120

Query: 167 VTRLLIGGRDAVQSALDKLAEKQMQEIDKKQ 198
           VTRLLIGGRDAVQSALDKLAEKQ QEIDKKQ
Sbjct: 121 VTRLLIGGRDAVQSALDKLAEKQRQEIDKKQ 151

[Close]
BLAST of CaUC08G153670 vs. ExPASy TrEMBL
Match: A0A6J1CRY1 (uncharacterized protein LOC111014019 OS=Momordica charantia OX=3673 GN=LOC111014019 PE=4 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 4.8e-74
Identity = 142/155 (91.61%), Postives = 150/155 (96.77%), Query Frame = 0 

Query: 43  SGAEMTMRLVGKCLNLSIHKNFLTCYKIGFHPRALHNGPDTIDELLDRHVVKKEQSFDDE 102
           SGAEMT+RLVGKCLNLSIHK+FL C KIGFHPR LHNGPDTIDELLDRHVVKKE+SF+DE
Sbjct: 5   SGAEMTIRLVGKCLNLSIHKHFLACNKIGFHPRVLHNGPDTIDELLDRHVVKKEKSFNDE 64

Query: 103 DDELITQRRLTSTRREALSLYRDILRATRFFMWADSRGVLWRDVLRQNARKEFEDARYES 162
           DDELITQR LTSTRREALSLYRDI+RATRFFMW DSRGVLWRDVLR+NARKEFE+ARYES
Sbjct: 65  DDELITQRHLTSTRREALSLYRDIIRATRFFMWPDSRGVLWRDVLRENARKEFEEARYES 124

Query: 163 DPEMVTRLLIGGRDAVQSALDKLAEKQMQEIDKKQ 198
           DPE+VTRLLIGGRDAVQSALDKLAEKQMQEIDKKQ
Sbjct: 125 DPEVVTRLLIGGRDAVQSALDKLAEKQMQEIDKKQ 159

[Close]
BLAST of CaUC08G153670 vs. ExPASy TrEMBL
Match: A0A6J1HEL0 (uncharacterized protein LOC111462339 OS=Cucurbita moschata OX=3662 GN=LOC111462339 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 6.1e-69
Identity = 133/151 (88.08%), Postives = 143/151 (94.70%), Query Frame = 0 

Query: 47  MTMRLVGKCLNLSIHKNFLTCYKIGFHPRALHNGPDTIDELLDRHVVKKEQSFDDEDDEL 106
           M+MRLV KC+ LS HKNFL C K+GFHPR LHNGPDTIDELLDRHVVKKE+SFDD+++EL
Sbjct: 1   MSMRLVEKCVKLSTHKNFLACNKVGFHPRLLHNGPDTIDELLDRHVVKKEKSFDDDEEEL 60

Query: 107 ITQRRLTSTRREALSLYRDILRATRFFMWADSRGVLWRDVLRQNARKEFEDARYESDPEM 166
           ITQRRLTSTRREALSLYRDILRATRFFMW DSRGVLWRDVLRQNARKEFEDAR+E+DPE+
Sbjct: 61  ITQRRLTSTRREALSLYRDILRATRFFMWPDSRGVLWRDVLRQNARKEFEDARFETDPEI 120

Query: 167 VTRLLIGGRDAVQSALDKLAEKQMQEIDKKQ 198
           VTRLLIGGRDAVQSALDKLAEKQ QEIDKKQ
Sbjct: 121 VTRLLIGGRDAVQSALDKLAEKQRQEIDKKQ 151

[Close]
BLAST of CaUC08G153670 vs. ExPASy TrEMBL
Match: A0A0A0LMK5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G346590 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 6.1e-69
Identity = 137/152 (90.13%), Postives = 144/152 (94.74%), Query Frame = 0 

Query: 47  MTMRLVGKCLNL-SIHKNFLTCYKIGFHPRALHNGPDTIDELLDRHVVKKEQSFDDEDDE 106
           MTMRLVGK LNL SIHKNFLTC KIGFHPR LHNGPDT++ELLDRHVVKKE+ FDDEDD+
Sbjct: 1   MTMRLVGKYLNLSSIHKNFLTCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKFFDDEDDK 60

Query: 107 LITQRRLTSTRREALSLYRDILRATRFFMWADSRGVLWRDVLRQNARKEFEDARYESDPE 166
           LITQRRLT+TRREALSLYRDILRATRFFMW DSRGVLWRDVLR+NARKEFEDAR ESDPE
Sbjct: 61  LITQRRLTTTRREALSLYRDILRATRFFMWPDSRGVLWRDVLRENARKEFEDARLESDPE 120

Query: 167 MVTRLLIGGRDAVQSALDKLAEKQMQEIDKKQ 198
           MVTRLLIGGRDAVQSALDKLAEKQ +EIDKKQ
Sbjct: 121 MVTRLLIGGRDAVQSALDKLAEKQREEIDKKQ 152

[Close]
BLAST of CaUC08G153670 vs. ExPASy TrEMBL
Match: A0A6J1K786 (uncharacterized protein LOC111492289 OS=Cucurbita maxima OX=3661 GN=LOC111492289 PE=4 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 1.5e-67
Identity = 131/151 (86.75%), Postives = 142/151 (94.04%), Query Frame = 0 

Query: 47  MTMRLVGKCLNLSIHKNFLTCYKIGFHPRALHNGPDTIDELLDRHVVKKEQSFDDEDDEL 106
           M+MRLV KC+ LS HKNFL C K G+HPRALHNGPDTIDELLD HVVKKE+SFDD+++EL
Sbjct: 1   MSMRLVEKCVKLSTHKNFLACNKFGYHPRALHNGPDTIDELLDIHVVKKEKSFDDDEEEL 60

Query: 107 ITQRRLTSTRREALSLYRDILRATRFFMWADSRGVLWRDVLRQNARKEFEDARYESDPEM 166
           ITQRRLTSTRRE+LSLYRDILRATRFFMW DSRGVLWRDVLRQNARKEFEDAR+E+DPE+
Sbjct: 61  ITQRRLTSTRRESLSLYRDILRATRFFMWPDSRGVLWRDVLRQNARKEFEDARFETDPEI 120

Query: 167 VTRLLIGGRDAVQSALDKLAEKQMQEIDKKQ 198
           VTRLLIGGRDAVQSALDKLAEKQ QEIDKKQ
Sbjct: 121 VTRLLIGGRDAVQSALDKLAEKQRQEIDKKQ 151

[Close]
BLAST of CaUC08G153670 vs. ExPASy TrEMBL
Match: A0A5A7VCD6 (Complex 1 LYR protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G001620 PE=4 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 2.8e-66
Identity = 133/152 (87.50%), Postives = 142/152 (93.42%), Query Frame = 0 

Query: 47  MTMRLVGKCLNL-SIHKNFLTCYKIGFHPRALHNGPDTIDELLDRHVVKKEQSFDDEDDE 106
           MTMRLVGK LNL SI KNFL C KIGFHPR LHNGPDT++ELLDRHVVKKE+S DD+ D+
Sbjct: 1   MTMRLVGKYLNLSSIDKNFLNCSKIGFHPRVLHNGPDTVEELLDRHVVKKEKSLDDDADK 60

Query: 107 LITQRRLTSTRREALSLYRDILRATRFFMWADSRGVLWRDVLRQNARKEFEDARYESDPE 166
           LITQRRLTSTRREALSLYRDILRATRFFMW DS+GVLWRDVLRQNARKEFEDAR+ESDPE
Sbjct: 61  LITQRRLTSTRREALSLYRDILRATRFFMWPDSKGVLWRDVLRQNARKEFEDARFESDPE 120

Query: 167 MVTRLLIGGRDAVQSALDKLAEKQMQEIDKKQ 198
           +VTRLLIGGRDAVQSALDKLAEKQ +EIDKKQ
Sbjct: 121 IVTRLLIGGRDAVQSALDKLAEKQRKEIDKKQ 152

[Close]
BLAST of CaUC08G153670 vs. TAIR 10
Match: AT1G76060.1 (LYR family of Fe/S cluster biogenesis protein )

HSP 1 Score: 177.6 bits (449), Expect = 1.3e-44
Identity = 89/124 (71.77%), Postives = 106/124 (85.48%), Query Frame = 0 

Query: 75  RALHNGPDTIDELLDRHVVKKEQSFDDEDD-ELITQRRLTSTRREALSLYRDILRATRFF 134
           R LH GPDT++ELL+RH+ KKE+   D D+ E + +RRLTSTRREALSLYRDILRATRFF
Sbjct: 29  RFLHEGPDTVEELLERHLAKKEKPIIDHDEAEFLNRRRLTSTRREALSLYRDILRATRFF 88

Query: 135 MWADSRGVLWRDVLRQNARKEFEDARYESDPEMVTRLLIGGRDAVQSALDKLAEKQMQEI 194
            W DSRG LWRDVLR+NARKEFE AR+E+DPE++TRLLIGG DAV SALDKLAEKQ + I
Sbjct: 89  TWIDSRGNLWRDVLRENARKEFEAARFETDPEVITRLLIGGSDAVSSALDKLAEKQREMI 148

Query: 195 DKKQ 198
           +K++
Sbjct: 149 EKQR 152

The following BLAST results are available for this feature:
BLAST of CaUC08G153670 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022144304.19.9e-7491.61uncharacterized protein LOC111014019 [Momordica charantia][more]
XP_038884246.13.2e-7293.96uncharacterized protein LOC120075144 [Benincasa hispida][more]
KAG7029455.15.6e-6988.74hypothetical protein SDJN02_07794, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_031736624.11.3e-6890.13uncharacterized protein LOC101214249 [Cucumis sativus] >KGN62269.1 hypothetical ... [more]
XP_022961619.11.3e-6888.08uncharacterized protein LOC111462339 [Cucurbita moschata] >XP_022961620.1 unchar... [more]
BLAST of CaUC08G153670 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CaUC08G153670 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1CRY14.8e-7491.61uncharacterized protein LOC111014019 OS=Momordica charantia OX=3673 GN=LOC111014... [more]
A0A6J1HEL06.1e-6988.08uncharacterized protein LOC111462339 OS=Cucurbita moschata OX=3662 GN=LOC1114623... [more]
A0A0A0LMK56.1e-6990.13Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G346590 PE=4 SV=1[more]
A0A6J1K7861.5e-6786.75uncharacterized protein LOC111492289 OS=Cucurbita maxima OX=3661 GN=LOC111492289... [more]
A0A5A7VCD62.8e-6687.50Complex 1 LYR protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82... [more]
BLAST of CaUC08G153670 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G76060.11.3e-4471.77LYR family of Fe/S cluster biogenesis protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008011Complex 1 LYR proteinPFAMPF05347Complex1_LYRcoord: 117..177
e-value: 3.1E-11
score: 43.1
NoneNo IPR availablePANTHERPTHR47484COMPLEX 1 PROTEIN CONTAINING PROTEIN, EXPRESSEDcoord: 52..197
NoneNo IPR availableCDDcd20267Complex1_LYR_LYRM7coord: 119..192
e-value: 2.8412E-17
score: 72.2111

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC08G153670.1CaUC08G153670.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0032981 mitochondrial respiratory chain complex I assembly
cellular_component GO:0005759 mitochondrial matrix