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CaUC08G152980 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTATTTTTAGAAAATCCTTCCTTTCAAATAATTGAGTCTTTGACACAACACACACTGTGGTGAAGAAGAAGAAGGAGAAGAGAGAACAAAAGGGCAACTGGGAAACACACACAATAATTCTATCTTAGTTATATTTTTTCCTTGAATCTTGGAATTTCTTCTGCATTTTGTTGGGTTTAAGGGGATCTTCACACCAAGAAAAACCCAAGAGTTAATTTCTCTTTTTACTCTTTTGAAGATGCCAAGACCAGGGCCAAGGCCTTATGAGTGTGTGAGAAGGGCTTGGCACAGTGATAGACACCAACCCATCAGAGGTTCTCTCATTCAAGAGATTTTCAGGTTTCCCCCTATTACTCTCTCTTTTCGTTTCTGTTGATCATTTTTTTTTTTTTTTTCTTTTTGAATCTCTGTTGGGTTTTTTGTGATCTGTGTTGTTTGCTCTGTTAGGGTTGTGCATGAGATTCATAACTCCTCCACTAAGAAGAACAAAGAATGGCAAGAAATGCTACCTGTTGTTGTTCTCAAAGCTGAAGAAATTTTGTACTCCAAAGCCAGTTCTGAGGTATTCTCCTTTTTTTTCTTTTTTTTTTCTTTTTTGCCCTTCTCTGCTGCTGCATATTTTTCTGCTTTCAGCTGATTTAAAAATCAAACCATGAGACATTATGCTTGACATTTGTTACTTCTGAAATTTTTAGGCACTAAAGTAGCCGGTAGTCCATGATCTTTGTTTAAGCTTAGTTTTTTCAAAGTTGTAATCTCTTTTTCCCTTGGATAGGCTGAATATATGGATTTTAGTACCCTTCGAGACCGCTTACTGGATGCCATTAATACCATAATAAAGCTTGATGACAGTACAGAAACTGGAGATTTTCTTCAGCCTTGCATTGAAGGTACGTGAAAAAGTTGCTTCTTTGGTCCCCCTTTGTATCCTCTTTTTCGAGGCTTTGTTTTGATCCTTTGTGTTGCATTTTGATTTTCCTTTCAGCTGCTCTCAATTTAGGCTGCACACCCAGCAAAGCTTCAAGGAGCCAACGAAACAATGTCTCTACAAACTATCTCAGTTCTAGGAATCAGGAGTCTCCCAGCTTGTCTCCTCCTCCCATGGTAATGAAGACTTCTCAAGGAGCTGTCACTAATTCTCGTTGTGTCCCCTATTTTTGGAATTTGGCCAAACCTCTGAACAATGGCTTAGGCCATTCTGGGTTTAGATTCCAAAGCCTTCATCCTGCTCATAATTCCACCTCCGAAAAGCTCCCTGCTGTGTTAAGCCCACATGGTTTGATGGAAAATGCTCTGCCTCCGAGCAAGTTTGCCATCTATCCGCTATATTATGGGAATAGTGTTCAGTGGCAAGGACAACACTCTGGCTTCCAAATCACTCCTAGACCGGTTTCTACACATCTGGATTCTACAAATGGAGGTGTTATGGAGAAGATTAGTGTTTCTGGTACAATGGCAGCAAATGGCATCACTCAAAATGAAGTAATGTATTATCTTGGGAGCCCATGTGATGATAAATGTGATCTAGCACTGCGTTTGGGACCTCTTTCTGCTTCAAGCTCAAGCTGTGAAAACAAAACTCCGCTTTGTGTGCTTAAAGTTGGTTCAGGCAGTTCACTAGAGGAAACGAAAACTGAGGATTGTTCCCAAGTGATGGAAAGGAAGCTTCCCTTGTTCCCTATGGTAAATGCATATGGCCTATCTGAGCACAGTACATGGGGGCGAAGTTTAGAGGGCGAATGTGTTGATGCAGAAACAAGGATGAGAAAACGAAAGGCAGAGTTTAGTCATTCATTGAAGGAAAGACACTTAAGTTGGCTCCCAAAGGTTCCTTCCAGCAGGTTCATAGGCTAAATCTTTTTCCATTTTGAAACAAACAACACGATTATGGACGTAAGAAGCTGGAGTGGGCCAGTTCCTCAGACACAAACTGTCCACAGGCGCAGTTTTGATGTTTGATGTTTGAAATGTAAGAATGAAGTTCAACAACTGGAATCTAAACTTGGATGGAGTAAGGGAATATATGTGGAAGAAAAGGGTCTAAGGCTGTCCATTAAAAAGAATTATCTTTTGGGATTAATTGATAGGGTTCGTTGGACCCATGGAGGAGATTACTTAAATTTTAGCAGTGGTGAAGAGTTGATAAACAAGCAACTGGTGAGTTTACTGTCTGTGCAAATGGGGGACAGAGAGGCATTGAGCCAACAAGCTTATTTATCATATTTTGGGGCAATGTGCTTTGGTTCTGTGGGTCCCTTTTCTTTTGCCCTTCTTTTTCATATTTGTTCTTTTTTGGAAAGAGCTGAATTGATCATTGAATGTTTGGATAGAAGTCCGCCTTCAACTTTTAATGACTGGTCACATTAGTCTCTGTGGGGTCAAATAGAAGATTCTTGTTTTATCTATTGTTAAGGTAGACAAAGCTTTCTGCTTTTAGTTAAACTTGCTTTATCAAATTAGGAAGTTGCTTAGAGAGAGATTCAAATGAGATTTACTTCATAAGATTTCATCAATATGATGCCTTTTAGTCATTTTCCATTAGATTAGATGCCACATTCTGCCCCTTTCCCACCAGTCATTATTTAGCACTTTTTGCCTCTTATCCTATCCTGTATTCACTGTATGATTAATGTCCAATCCAATGGGAGCCTGTTATATGGA TTTATTTTTAGAAAATCCTTCCTTTCAAATAATTGAGTCTTTGACACAACACACACTGTGGTGAAGAAGAAGAAGGAGAAGAGAGAACAAAAGGGCAACTGGGAAACACACACAATAATTCTATCTTAATGCCAAGACCAGGGCCAAGGCCTTATGAGTGTGTGAGAAGGGCTTGGCACAGTGATAGACACCAACCCATCAGAGGTTCTCTCATTCAAGAGATTTTCAGGGTTGTGCATGAGATTCATAACTCCTCCACTAAGAAGAACAAAGAATGGCAAGAAATGCTACCTGTTGTTGTTCTCAAAGCTGAAGAAATTTTGTACTCCAAAGCCAGTTCTGAGGCTGAATATATGGATTTTAGTACCCTTCGAGACCGCTTACTGGATGCCATTAATACCATAATAAAGCTTGATGACAGTACAGAAACTGGAGATTTTCTTCAGCCTTGCATTGAAGCTGCTCTCAATTTAGGCTGCACACCCAGCAAAGCTTCAAGGAGCCAACGAAACAATGTCTCTACAAACTATCTCAGTTCTAGGAATCAGGAGTCTCCCAGCTTGTCTCCTCCTCCCATGGTAATGAAGACTTCTCAAGGAGCTGTCACTAATTCTCGTTGTGTCCCCTATTTTTGGAATTTGGCCAAACCTCTGAACAATGGCTTAGGCCATTCTGGGTTTAGATTCCAAAGCCTTCATCCTGCTCATAATTCCACCTCCGAAAAGCTCCCTGCTGTGTTAAGCCCACATGGTTTGATGGAAAATGCTCTGCCTCCGAGCAAGTTTGCCATCTATCCGCTATATTATGGGAATAGTGTTCAGTGGCAAGGACAACACTCTGGCTTCCAAATCACTCCTAGACCGGTTTCTACACATCTGGATTCTACAAATGGAGGTGTTATGGAGAAGATTAGTGTTTCTGGTACAATGGCAGCAAATGGCATCACTCAAAATGAAGTAATGTATTATCTTGGGAGCCCATGTGATGATAAATGTGATCTAGCACTGCGTTTGGGACCTCTTTCTGCTTCAAGCTCAAGCTGTGAAAACAAAACTCCGCTTTGTGTGCTTAAAGTTGGTTCAGGCAGTTCACTAGAGGAAACGAAAACTGAGGATTGTTCCCAAGTGATGGAAAGGAAGCTTCCCTTGTTCCCTATGGTAAATGCATATGGCCTATCTGAGCACAGTACATGGGGGCGAAGTTTAGAGGGCGAATGTGTTGATGCAGAAACAAGGATGAGAAAACGAAAGGCAGAGTTTAGTCATTCATTGAAGGAAAGACACTTAAGTTGGCTCCCAAAGGTTCCTTCCAGCAGGTTCATAGGCTAAATCTTTTTCCATTTTGAAACAAACAACACGATTATGGACGTAAGAAGCTGGAGTGGGCCAGTTCCTCAGACACAAACTGTCCACAGGCGCAGTTTTGATGTTTGATGTTTGAAATGTAAGAATGAAGTTCAACAACTGGAATCTAAACTTGGATGGAGTAAGGGAATATATGTGGAAGAAAAGGGTCTAAGGCTGTCCATTAAAAAGAATTATCTTTTGGGATTAATTGATAGGGTTCGTTGGACCCATGGAGGAGATTACTTAAATTTTAGCAGTGGTGAAGAGTTGATAAACAAGCAACTGGTGAGTTTACTGTCTGTGCAAATGGGGGACAGAGAGGCATTGAGCCAACAAGCTTATTTATCATATTTTGGGGCAATGTGCTTTGGTTCTGTGGGTCCCTTTTCTTTTGCCCTTCTTTTTCATATTTGTTCTTTTTTGGAAAGAGCTGAATTGATCATTGAATGTTTGGATAGAAGTCCGCCTTCAACTTTTAATGACTGGTCACATTAGTCTCTGTGGGGTCAAATAGAAGATTCTTGTTTTATCTATTGTTAAGGTAGACAAAGCTTTCTGCTTTTAGTTAAACTTGCTTTATCAAATTAGGAAGTTGCTTAGAGAGAGATTCAAATGAGATTTACTTCATAAGATTTCATCAATATGATGCCTTTTAGTCATTTTCCATTAGATTAGATGCCACATTCTGCCCCTTTCCCACCAGTCATTATTTAGCACTTTTTGCCTCTTATCCTATCCTGTATTCACTGTATGATTAATGTCCAATCCAATGGGAGCCTGTTATATGGA ATGCCAAGACCAGGGCCAAGGCCTTATGAGTGTGTGAGAAGGGCTTGGCACAGTGATAGACACCAACCCATCAGAGGTTCTCTCATTCAAGAGATTTTCAGGGTTGTGCATGAGATTCATAACTCCTCCACTAAGAAGAACAAAGAATGGCAAGAAATGCTACCTGTTGTTGTTCTCAAAGCTGAAGAAATTTTGTACTCCAAAGCCAGTTCTGAGGCTGAATATATGGATTTTAGTACCCTTCGAGACCGCTTACTGGATGCCATTAATACCATAATAAAGCTTGATGACAGTACAGAAACTGGAGATTTTCTTCAGCCTTGCATTGAAGCTGCTCTCAATTTAGGCTGCACACCCAGCAAAGCTTCAAGGAGCCAACGAAACAATGTCTCTACAAACTATCTCAGTTCTAGGAATCAGGAGTCTCCCAGCTTGTCTCCTCCTCCCATGGTAATGAAGACTTCTCAAGGAGCTGTCACTAATTCTCGTTGTGTCCCCTATTTTTGGAATTTGGCCAAACCTCTGAACAATGGCTTAGGCCATTCTGGGTTTAGATTCCAAAGCCTTCATCCTGCTCATAATTCCACCTCCGAAAAGCTCCCTGCTGTGTTAAGCCCACATGGTTTGATGGAAAATGCTCTGCCTCCGAGCAAGTTTGCCATCTATCCGCTATATTATGGGAATAGTGTTCAGTGGCAAGGACAACACTCTGGCTTCCAAATCACTCCTAGACCGGTTTCTACACATCTGGATTCTACAAATGGAGGTGTTATGGAGAAGATTAGTGTTTCTGGTACAATGGCAGCAAATGGCATCACTCAAAATGAAGTAATGTATTATCTTGGGAGCCCATGTGATGATAAATGTGATCTAGCACTGCGTTTGGGACCTCTTTCTGCTTCAAGCTCAAGCTGTGAAAACAAAACTCCGCTTTGTGTGCTTAAAGTTGGTTCAGGCAGTTCACTAGAGGAAACGAAAACTGAGGATTGTTCCCAAGTGATGGAAAGGAAGCTTCCCTTGTTCCCTATGGTAAATGCATATGGCCTATCTGAGCACAGTACATGGGGGCGAAGTTTAGAGGGCGAATGTGTTGATGCAGAAACAAGGATGAGAAAACGAAAGGCAGAGTTTAGTCATTCATTGAAGGAAAGACACTTAAGTTGGCTCCCAAAGGTTCCTTCCAGCAGGTTCATAGGCTAA MPRPGPRPYECVRRAWHSDRHQPIRGSLIQEIFRVVHEIHNSSTKKNKEWQEMLPVVVLKAEEILYSKASSEAEYMDFSTLRDRLLDAINTIIKLDDSTETGDFLQPCIEAALNLGCTPSKASRSQRNNVSTNYLSSRNQESPSLSPPPMVMKTSQGAVTNSRCVPYFWNLAKPLNNGLGHSGFRFQSLHPAHNSTSEKLPAVLSPHGLMENALPPSKFAIYPLYYGNSVQWQGQHSGFQITPRPVSTHLDSTNGGVMEKISVSGTMAANGITQNEVMYYLGSPCDDKCDLALRLGPLSASSSSCENKTPLCVLKVGSGSSLEETKTEDCSQVMERKLPLFPMVNAYGLSEHSTWGRSLEGECVDAETRMRKRKAEFSHSLKERHLSWLPKVPSSRFIG Homology
BLAST of CaUC08G152980 vs. NCBI nr
Match: XP_038885601.1 (uncharacterized protein LOC120075924 [Benincasa hispida]) HSP 1 Score: 697.2 bits (1798), Expect = 8.2e-197 Identity = 349/398 (87.69%), Postives = 365/398 (91.71%), Query Frame = 0
BLAST of CaUC08G152980 vs. NCBI nr
Match: KAE8652204.1 (hypothetical protein Csa_022525 [Cucumis sativus]) HSP 1 Score: 645.6 bits (1664), Expect = 2.8e-181 Identity = 321/399 (80.45%), Postives = 347/399 (86.97%), Query Frame = 0
BLAST of CaUC08G152980 vs. NCBI nr
Match: XP_008445225.1 (PREDICTED: uncharacterized protein LOC103488315 isoform X1 [Cucumis melo] >KAA0064920.1 uncharacterized protein E6C27_scaffold82G002380 [Cucumis melo var. makuwa]) HSP 1 Score: 642.9 bits (1657), Expect = 1.8e-180 Identity = 320/399 (80.20%), Postives = 346/399 (86.72%), Query Frame = 0
BLAST of CaUC08G152980 vs. NCBI nr
Match: XP_004138854.3 (uncharacterized protein LOC101207405 isoform X1 [Cucumis sativus]) HSP 1 Score: 639.0 bits (1647), Expect = 2.7e-179 Identity = 319/399 (79.95%), Postives = 345/399 (86.47%), Query Frame = 0
BLAST of CaUC08G152980 vs. NCBI nr
Match: XP_022131761.1 (uncharacterized protein LOC111004848 [Momordica charantia]) HSP 1 Score: 630.6 bits (1625), Expect = 9.5e-177 Identity = 311/399 (77.94%), Postives = 342/399 (85.71%), Query Frame = 0
BLAST of CaUC08G152980 vs. ExPASy TrEMBL
Match: A0A5A7VCK2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G002380 PE=4 SV=1) HSP 1 Score: 642.9 bits (1657), Expect = 8.9e-181 Identity = 320/399 (80.20%), Postives = 346/399 (86.72%), Query Frame = 0
BLAST of CaUC08G152980 vs. ExPASy TrEMBL
Match: A0A1S3BC56 (uncharacterized protein LOC103488315 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488315 PE=4 SV=1) HSP 1 Score: 642.9 bits (1657), Expect = 8.9e-181 Identity = 320/399 (80.20%), Postives = 346/399 (86.72%), Query Frame = 0
BLAST of CaUC08G152980 vs. ExPASy TrEMBL
Match: A0A6J1BQE5 (uncharacterized protein LOC111004848 OS=Momordica charantia OX=3673 GN=LOC111004848 PE=4 SV=1) HSP 1 Score: 630.6 bits (1625), Expect = 4.6e-177 Identity = 311/399 (77.94%), Postives = 342/399 (85.71%), Query Frame = 0
BLAST of CaUC08G152980 vs. ExPASy TrEMBL
Match: A0A1S3BCX1 (uncharacterized protein LOC103488315 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103488315 PE=4 SV=1) HSP 1 Score: 628.2 bits (1619), Expect = 2.3e-176 Identity = 315/399 (78.95%), Postives = 341/399 (85.46%), Query Frame = 0
BLAST of CaUC08G152980 vs. ExPASy TrEMBL
Match: A0A0A0LSI7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G381810 PE=4 SV=1) HSP 1 Score: 615.9 bits (1587), Expect = 1.2e-172 Identity = 308/385 (80.00%), Postives = 334/385 (86.75%), Query Frame = 0
BLAST of CaUC08G152980 vs. TAIR 10
Match: AT4G32295.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G24150.1); Has 39 Blast hits to 39 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 218.0 bits (554), Expect = 1.4e-56 Identity = 108/145 (74.48%), Postives = 125/145 (86.21%), Query Frame = 0
BLAST of CaUC08G152980 vs. TAIR 10
Match: AT3G24150.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32295.1); Has 50 Blast hits to 50 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). ) HSP 1 Score: 205.3 bits (521), Expect = 9.1e-53 Identity = 120/256 (46.88%), Postives = 158/256 (61.72%), Query Frame = 0
BLAST of CaUC08G152980 vs. TAIR 10
Match: AT4G32295.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G24150.1); Has 34 Blast hits to 34 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 104.8 bits (260), Expect = 1.7e-22 Identity = 56/81 (69.14%), Postives = 66/81 (81.48%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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