CaUC08G152910 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC08G152910
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	ATP-dependent RNA helicase
Location	Ciama_Chr08: 24629587 .. 24633977 (-)
RNA-Seq Expression	CaUC08G152910
Synteny	CaUC08G152910

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAGAAACAAGGGACAACGAATATGAGGAAGAGCTCCTCGACTACGAGGAAGAGGAAGAGAAGGCTCCCGATTCCGTTGGAGCTAAAGTCAACGGTGAAGCTGGAAAGAAGTGAGTGGTCTTCTTATGCAACCATCTCTAGCTTTGTTCTCTATAGATTTGTTTATGGACAAACTAATAGTTCAATGTTTCACCACGGTTTCTCGAACTCATGTTATGAAATAATCTGAGATTTGGTAGTAATTTTATCTATTTACTTTAGTTTGGAGTTAAGGCAGTTGGAATAAGTAGTTGTTTGAGCTTGGAGTAAACTGAAATGAGATGATTTATTCTTCATACTACATCTTTCTTGCAAGATGTAGATTTTGACCTTCTTTCATTGTCTTCTCTTTCAGGGGTTATGTTGGAATTCATAGTTCGGGATTCAGAGACTTCCTATTGAAGCCAGAGCTTCTCCGTGCTATTGTAGACTCTGGATTTGAGCATCCATCTGAAGGCAAATTTCTATTTTTTTTATATTCTGAATCGTTGGATCTTAAGCTAAAGTGACCATTTAGTTTAAATTGGCACAATTAGTCTTAAGTTTTCGATTAGCAGGATTTTGAAGAAACATCTTTAGGCTTGTACAGATGCAGTAGCTCACTAACCTGCATCACATATCTGTGAAGTCTGGTTTCATTTTGGAGTTCATAATTATTGGTTGTTATTGGGGTTTGTATAGGAGTTATCAACTTATCACGTCATAAATAGGATAGAGTTAATTGAGTGTTGCTTTGGTATATTTTACGGAGGGGTTTTTAGGTCATAAAGGAAACCTATCATGTTCATCAGTTGTTACTATGCTGCAGTTTTTCACGTGTTCATGACATGAATTTAATGTTTCCTTGAGAACACATGATGCTATAAATTTATAACTGTGTTTCAGATAGAGAGAAATTTATTGACACGTTTCTTGAGCCATTATAATTTGCAATTTTGTATGGATCAAGTCATGATTGTCTTTCTTGATTATTGCTATTTTCATATGTTCTCATTGCTCTCATAGATAAATATGTCCTCAATCCTTTTAGTACTTGCTCTTCGTAACCAGTCCATCTTAGATGTTTATATCAGTTGTTTAATGGTTTGCAGGTAATAAATTAATATCATAATCTTGATTTCGGAGCAATATATATGGTTTGATAAAGCTTTCACATAAAAGGATCGGAGACGTTATAATTTACTTACCAACGGTTCATTTGGTTCGATCCTTTTCTTTGGTTCTTCATCAGTGCAACATGAATGTATTCCCCAAGCTATCCTCGGCATGGATGTTATTTGTCAAGCTAAATCTGGTATGGGTAAAACAGCTGTTTTTGTTCTGTCAACACTGCAGCAGATTGACCCTGTTGCTGGTCAAGTTTCTGCCCTTGTTCTGTGCCATACTAGGGAGCTTGCATACCAGGTGCGTCGGTGTGTTGCTTATCTTTTTAAATCTAGATGCTCTTGATGCATATATAGTTCCTTGCATTATATGTATATCTAGCTCTGACGCTTTTCTTATACCCTTTTAGATCTGTCACGAGTTTGAAAGGTTCAGCACATATCTTCCGGATCTGAAGGTTGCTGTCTTCTATGGTGGAGTGAATATTAAAATTCACAAAGATCTTCTGAAAAATGAATGTCCTCATATCGTTGTTGGAACACCTGGAAGGATACTGGCATTGTCAAGAGATAAAGACCTATCCCTGAAGAATGTCCGGCATTTTATCTTGGATGAGTGTGACAAGATGCTCGAGTCACTTGGTATATTTGCTTTTAATAATAATTTGTTCTTCAAAGTTTTATGGGATTCTCAATTTTATATTACATGATTCCAAGTTCTATATTTTTTCCCCTTCGTCCTGGTCCTTTTATTTCTCATGTGCTATTTTTTTAAATACATGTATATTCTGGTATTTTTTCTTATTGTGCCCCCTACATGTGTTCTGCAGATATGCGGAGGGATGTACAGGAGATCTTCAAGATGACTCCTCATGACAAACAAGTTATGATGTTTTCTGCAACACTCAGCAAAGAAATCCGCCCAGTTTGCAAGAAGTTTATGCAAGATGTAATTTCCGACAGCTAGTAAACCTTGAATTTAGAAGTTTTTTCCCTTTAAATTGCGCTTTCTCCTAGAGTTTTGCAAATTGTGGTTTAACAGTAGGGTTTCCTACTTTCTTGTTGCTCAAGGGGGGATCTGTTTTAGTGTGCTATCTTTTATCTGCTGTTACCTACAGCTGGTTTGGGAATTTACTAGGATAGTGGAGTAATAGTTGGTGATACTATCTAGTGGTTCTGAAGTAGTTGGTGATTGAAGTCACTCACTTCTTTCTTTTTTACTCTCCATTGTGTGTCACTTGTTATTCTCTTATTGGCTTATGGTTGTTGGATTATGGTTTCAACTTCCAACTGTACGATCAGGGGTATCCAAGTTAGGGGACAAGAAAAAAAGGTCCTATCAGATTTTTGTGTAATTAGGTTAACTGTCTGCATCTGCGGCATTTCTTGGTGAATATAGAAGTATCTGCAAGTGGAGGCAGAACAGTTGGGCCACAATCTTGATTCATGGGATGAACATGCTCTTTCATTTCCTTCATCTTGAGGAAGTATTATGATTTACCGTGACATTTGTTCCTTTCAGCCAATGGAAATATATGTAGACGACGAGGCAAAGCTGACATTGCATGGTCTTGTCCAGGTACACGGAGTTGACATGTATTAGCTGTGCTTAGATTGTTCTTTCTCCTTCCCTTAAATATTTTTTTTTGGAATGTCAGCACTACATCAAATTGAGCGAGATGGAGAAAAATCGAAAGTTGAACGACCTCCTTGATGCGTTGGACTTCAATCAAGTGGTTATTTTTGTTAAAAGTGTTAATCGGGCAGCTGAGCTGGATAAGTTGTTGGTGGAGTGTAATTTTCCCTCCATATGCATCCACTCTGGCATGTCTCAGGAAGAGAGGTAGGTCTGACATCAATTTTTCAGGTTCATAATTTCCATATTCATTTCTGCCTAAGAAAATTATTCTCCCTTATTAATGTTAACTAATGGGGGTGTTTAGACGTTGATCTTTATTTTTGAGGTTAACTATGGACCTATGGTATAGTTACTGAAGTGGTGTTGTTGATTGTTTCTTCATCTTCTTCTTGTTCTTATTTATTATTTTATCTTTAAAATTGGATTATCTGGATGTAGAACTATTGCCCCTGCAAACTGTCATACTTTGTCAACGTTGTTTGGTAGGAAGTTGCAAAACATCCCATTTCATTTGTTATTTACTGAAGGTGGTTGATCTTTCATGAAATCAATGACAATATGGAAAGATGATGTGCCAGGTTGACTCGATACAAGGGTTTTAAGGAAGGACATAAGCGGATTCTCGTGGCTACAGATTTGGTTGGTCGAGGAATTGACATTGAACGTGTTAACATTGTTATCAATTATGACATGCCAGATTCTGCTGATACTTATCTGCACAGGGTAAAGTGGACCATTCCTACTTAATTTGATCTCCATTATATATATACATTGTCCTTCGTGAGAGTATAATTAATTTTTCTTTGAATATCTTACAGGTTGGCAGAGCTGGTAGATTTGGCACCAAAGGGCTTGCAATTACGTTCGTATCATCTGCGGCTGATTCTGATGTTCTCAATAATGTATGTAATTTCCAGTGGTTTTTTTAGTGTGGCCTTTAGATGGGTGTTTTCTTAGTTTTGGTTATTGCAGGTTCAAGAAAGGTTTGAAGTCGATATTAAGGAGCTTCCAGAGCAGATTGATACATCCACTTACAGTATGTTTTCTTCCATTTTTTTGATGAGATTATTTTCCTTTTTGAACTCCAGTTCTTCGTAGTTCATGTTTCGTTTAATACTACTGTTGATTATCATTTAGTTCCCTTTTCTGACCGGTTCAAAATGAATTCTTACAGACTTTTGTGGGTTGAATTTTTGCTCATTTAGATGTGATTTTTTAATGGGTACCTTGGTATAGTCTTGTACCTAAAATTACGTAGCTGTCTCTTGTCAGTCAGTTGCAGTTGATTTTGAATGGTAAATTCAAACTGCTGGTTGACAGAAACATGATGATTATGTTTTCTGTCTTTCATTCTCGCTCTGTTGTCTCTGCTCAGTTGTCCACTCGGTTCCATTAATTTTGAATCCAATTTTTTTTGGATTTTGGAGGATTATTTTATCATCTGGCGGGATCTTGTCTGAAAGCTAACTAATATTAGTTCAAGAATTCGACACTGCTAAGTTTTTACAGATGAAAACATAAGGGGAATCGGGTCTTTTTTCTGTTTATACGTTATTCTTCTGAGTTAAGTTAATATATTGCTCTTTTTGGTTGCAGTGCCATCATAG

mRNA sequence

ATGGGAGAAACAAGGGACAACGAATATGAGGAAGAGCTCCTCGACTACGAGGAAGAGGAAGAGAAGGCTCCCGATTCCGTTGGAGCTAAAGTCAACGGTGAAGCTGGAAAGAAGGGTTATGTTGGAATTCATAGTTCGGGATTCAGAGACTTCCTATTGAAGCCAGAGCTTCTCCGTGCTATTGTAGACTCTGGATTTGAGCATCCATCTGAAGTGCAACATGAATGTATTCCCCAAGCTATCCTCGGCATGGATGTTATTTGTCAAGCTAAATCTGGTATGGGTAAAACAGCTGTTTTTGTTCTGTCAACACTGCAGCAGATTGACCCTGTTGCTGGTCAAGTTTCTGCCCTTGTTCTGTGCCATACTAGGGAGCTTGCATACCAGATCTGTCACGAGTTTGAAAGGTTCAGCACATATCTTCCGGATCTGAAGGTTGCTGTCTTCTATGGTGGAGTGAATATTAAAATTCACAAAGATCTTCTGAAAAATGAATGTCCTCATATCGTTGTTGGAACACCTGGAAGGATACTGGCATTGTCAAGAGATAAAGACCTATCCCTGAAGAATGTCCGGCATTTTATCTTGGATGAGTGTGACAAGATGCTCGAGTCACTTGATATGCGGAGGGATGTACAGGAGATCTTCAAGATGACTCCTCATGACAAACAAGTTATGATGTTTTCTGCAACACTCAGCAAAGAAATCCGCCCAGTTTGCAAGAAGTTTATGCAAGATCCAATGGAAATATATGTAGACGACGAGGCAAAGCTGACATTGCATGGTCTTGTCCAGCACTACATCAAATTGAGCGAGATGGAGAAAAATCGAAAGTTGAACGACCTCCTTGATGCGTTGGACTTCAATCAAGTGGTTATTTTTGTTAAAAGTGTTAATCGGGCAGCTGAGCTGGATAAGTTGTTGGTGGAGTGTAATTTTCCCTCCATATGCATCCACTCTGGCATGTCTCAGGAAGAGAGGTTGACTCGATACAAGGGTTTTAAGGAAGGACATAAGCGGATTCTCGTGGCTACAGATTTGGTTGGTCGAGGAATTGACATTGAACGTGTTAACATTGTTATCAATTATGACATGCCAGATTCTGCTGATACTTATCTGCACAGGGTTGGCAGAGCTGGTAGATTTGGCACCAAAGGGCTTGCAATTACGTTCGTATCATCTGCGGCTGATTCTGATGTTCTCAATAATGTTCAAGAAAGGTTTGAAGTCGATATTAAGGAGCTTCCAGAGCAGATTGATACATCCACTTACATGCCATCATAG

Coding sequence (CDS)

ATGGGAGAAACAAGGGACAACGAATATGAGGAAGAGCTCCTCGACTACGAGGAAGAGGAAGAGAAGGCTCCCGATTCCGTTGGAGCTAAAGTCAACGGTGAAGCTGGAAAGAAGGGTTATGTTGGAATTCATAGTTCGGGATTCAGAGACTTCCTATTGAAGCCAGAGCTTCTCCGTGCTATTGTAGACTCTGGATTTGAGCATCCATCTGAAGTGCAACATGAATGTATTCCCCAAGCTATCCTCGGCATGGATGTTATTTGTCAAGCTAAATCTGGTATGGGTAAAACAGCTGTTTTTGTTCTGTCAACACTGCAGCAGATTGACCCTGTTGCTGGTCAAGTTTCTGCCCTTGTTCTGTGCCATACTAGGGAGCTTGCATACCAGATCTGTCACGAGTTTGAAAGGTTCAGCACATATCTTCCGGATCTGAAGGTTGCTGTCTTCTATGGTGGAGTGAATATTAAAATTCACAAAGATCTTCTGAAAAATGAATGTCCTCATATCGTTGTTGGAACACCTGGAAGGATACTGGCATTGTCAAGAGATAAAGACCTATCCCTGAAGAATGTCCGGCATTTTATCTTGGATGAGTGTGACAAGATGCTCGAGTCACTTGATATGCGGAGGGATGTACAGGAGATCTTCAAGATGACTCCTCATGACAAACAAGTTATGATGTTTTCTGCAACACTCAGCAAAGAAATCCGCCCAGTTTGCAAGAAGTTTATGCAAGATCCAATGGAAATATATGTAGACGACGAGGCAAAGCTGACATTGCATGGTCTTGTCCAGCACTACATCAAATTGAGCGAGATGGAGAAAAATCGAAAGTTGAACGACCTCCTTGATGCGTTGGACTTCAATCAAGTGGTTATTTTTGTTAAAAGTGTTAATCGGGCAGCTGAGCTGGATAAGTTGTTGGTGGAGTGTAATTTTCCCTCCATATGCATCCACTCTGGCATGTCTCAGGAAGAGAGGTTGACTCGATACAAGGGTTTTAAGGAAGGACATAAGCGGATTCTCGTGGCTACAGATTTGGTTGGTCGAGGAATTGACATTGAACGTGTTAACATTGTTATCAATTATGACATGCCAGATTCTGCTGATACTTATCTGCACAGGGTTGGCAGAGCTGGTAGATTTGGCACCAAAGGGCTTGCAATTACGTTCGTATCATCTGCGGCTGATTCTGATGTTCTCAATAATGTTCAAGAAAGGTTTGAAGTCGATATTAAGGAGCTTCCAGAGCAGATTGATACATCCACTTACATGCCATCATAG

Protein sequence

MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVLCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILALSRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVNRAAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQIDTSTYMPS

Homology

[Close]

BLAST of CaUC08G152910 vs. NCBI nr
Match: XP_004138728.2 (DEAD-box ATP-dependent RNA helicase 56 [Cucumis sativus] >XP_008445205.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 56 [Cucumis melo] >XP_008445206.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 56 [Cucumis melo] >XP_011649821.1 DEAD-box ATP-dependent RNA helicase 56 [Cucumis sativus] >XP_022131577.1 DEAD-box ATP-dependent RNA helicase 56 [Momordica charantia] >XP_022131578.1 DEAD-box ATP-dependent RNA helicase 56 [Momordica charantia] >XP_038885261.1 DEAD-box ATP-dependent RNA helicase 15 [Benincasa hispida] >XP_038885262.1 DEAD-box ATP-dependent RNA helicase 15 [Benincasa hispida] >KAA0064928.1 DEAD-box ATP-dependent RNA helicase 56-like isoform X1 [Cucumis melo var. makuwa] >KGN62946.1 hypothetical protein Csa_022422 [Cucumis sativus])

HSP 1 Score: 852.8 bits (2202), Expect = 1.3e-243
Identity = 427/427 (100.00%), Postives = 427/427 (100.00%), Query Frame = 0


Query: 1   MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRA 60
           MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRA
Sbjct: 1   MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRA 60

Query: 61  IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL 120
           IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL
Sbjct: 61  IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL 120

Query: 121 CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL 180
           CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL
Sbjct: 121 CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL 180

Query: 181 SRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC 240
           SRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC
Sbjct: 181 SRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC 240

Query: 241 KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVNR 300
           KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVNR
Sbjct: 241 KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVNR 300

Query: 301 AAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIV 360
           AAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIV
Sbjct: 301 AAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIV 360

Query: 361 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQID 420
           INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQID
Sbjct: 361 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQID 420

Query: 421 TSTYMPS 428
           TSTYMPS
Sbjct: 421 TSTYMPS 427

[Close]

BLAST of CaUC08G152910 vs. NCBI nr
Match: XP_022961952.1 (DEAD-box ATP-dependent RNA helicase 56 [Cucurbita moschata] >XP_022961953.1 DEAD-box ATP-dependent RNA helicase 56 [Cucurbita moschata] >XP_023545958.1 DEAD-box ATP-dependent RNA helicase 56 [Cucurbita pepo subsp. pepo] >XP_023545959.1 DEAD-box ATP-dependent RNA helicase 56 [Cucurbita pepo subsp. pepo] >KAG7029510.1 DEAD-box ATP-dependent RNA helicase 56 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 850.9 bits (2197), Expect = 4.8e-243
Identity = 426/427 (99.77%), Postives = 427/427 (100.00%), Query Frame = 0


Query: 1   MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRA 60
           MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRA
Sbjct: 1   MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRA 60

Query: 61  IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL 120
           IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL
Sbjct: 61  IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL 120

Query: 121 CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL 180
           CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL
Sbjct: 121 CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL 180

Query: 181 SRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC 240
           SRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC
Sbjct: 181 SRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC 240

Query: 241 KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVNR 300
           KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSV+R
Sbjct: 241 KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSR 300

Query: 301 AAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIV 360
           AAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIV
Sbjct: 301 AAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIV 360

Query: 361 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQID 420
           INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQID
Sbjct: 361 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQID 420

Query: 421 TSTYMPS 428
           TSTYMPS
Sbjct: 421 TSTYMPS 427

[Close]

BLAST of CaUC08G152910 vs. NCBI nr
Match: KAG6598572.1 (DEAD-box ATP-dependent RNA helicase 56, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 850.9 bits (2197), Expect = 4.8e-243
Identity = 426/427 (99.77%), Postives = 427/427 (100.00%), Query Frame = 0


Query: 1   MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRA 60
           MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRA
Sbjct: 48  MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRA 107

Query: 61  IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL 120
           IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL
Sbjct: 108 IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL 167

Query: 121 CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL 180
           CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL
Sbjct: 168 CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL 227

Query: 181 SRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC 240
           SRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC
Sbjct: 228 SRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC 287

Query: 241 KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVNR 300
           KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSV+R
Sbjct: 288 KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSR 347

Query: 301 AAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIV 360
           AAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIV
Sbjct: 348 AAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIV 407

Query: 361 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQID 420
           INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQID
Sbjct: 408 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQID 467

Query: 421 TSTYMPS 428
           TSTYMPS
Sbjct: 468 TSTYMPS 474

[Close]

BLAST of CaUC08G152910 vs. NCBI nr
Match: KAG6585467.1 (DEAD-box ATP-dependent RNA helicase 56, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 849.7 bits (2194), Expect = 1.1e-242
Identity = 425/427 (99.53%), Postives = 427/427 (100.00%), Query Frame = 0


Query: 1   MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRA 60
           MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRA
Sbjct: 18  MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRA 77

Query: 61  IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL 120
           IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL
Sbjct: 78  IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL 137

Query: 121 CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL 180
           CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL
Sbjct: 138 CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL 197

Query: 181 SRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC 240
           +RDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC
Sbjct: 198 TRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC 257

Query: 241 KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVNR 300
           KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSV+R
Sbjct: 258 KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSR 317

Query: 301 AAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIV 360
           AAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIV
Sbjct: 318 AAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIV 377

Query: 361 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQID 420
           INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQID
Sbjct: 378 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQID 437

Query: 421 TSTYMPS 428
           TSTYMPS
Sbjct: 438 TSTYMPS 444

[Close]

BLAST of CaUC08G152910 vs. NCBI nr
Match: XP_022951402.1 (DEAD-box ATP-dependent RNA helicase 56-like [Cucurbita moschata] >XP_022951403.1 DEAD-box ATP-dependent RNA helicase 56-like [Cucurbita moschata] >XP_023002354.1 DEAD-box ATP-dependent RNA helicase 56 [Cucurbita maxima] >XP_023002355.1 DEAD-box ATP-dependent RNA helicase 56 [Cucurbita maxima] >XP_023537961.1 DEAD-box ATP-dependent RNA helicase 56-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 849.7 bits (2194), Expect = 1.1e-242
Identity = 425/427 (99.53%), Postives = 427/427 (100.00%), Query Frame = 0


Query: 1   MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRA 60
           MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRA
Sbjct: 1   MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRA 60

Query: 61  IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL 120
           IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL
Sbjct: 61  IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL 120

Query: 121 CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL 180
           CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL
Sbjct: 121 CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL 180

Query: 181 SRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC 240
           +RDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC
Sbjct: 181 TRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC 240

Query: 241 KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVNR 300
           KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSV+R
Sbjct: 241 KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSR 300

Query: 301 AAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIV 360
           AAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIV
Sbjct: 301 AAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIV 360

Query: 361 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQID 420
           INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQID
Sbjct: 361 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQID 420

Query: 421 TSTYMPS 428
           TSTYMPS
Sbjct: 421 TSTYMPS 427

[Close]

BLAST of CaUC08G152910 vs. ExPASy Swiss-Prot
Match: Q56XG6 (DEAD-box ATP-dependent RNA helicase 15 OS=Arabidopsis thaliana OX=3702 GN=RH15 PE=1 SV=3)

HSP 1 Score: 800.4 bits (2066), Expect = 9.7e-231
Identity = 403/428 (94.16%), Postives = 416/428 (97.20%), Query Frame = 0


Query: 1   MGETRDNE-YEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLR 60
           MG+ RDNE YEEELLDYEEE+EK PDS G KVNGEA KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1   MGDARDNEAYEEELLDYEEEDEKVPDS-GNKVNGEAVKKGYVGIHSSGFRDFLLKPELLR 60

Query: 61  AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALV 120
           AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQI+P  GQVSALV
Sbjct: 61  AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSALV 120

Query: 121 LCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILA 180
           LCHTRELAYQIC+EF RFSTYLPD KV+VFYGGVNIKIHKDLLKNECPHIVVGTPGR+LA
Sbjct: 121 LCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLA 180

Query: 181 LSRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 240
           L+R+KDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV
Sbjct: 181 LAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 240

Query: 241 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVN 300
           CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSV+
Sbjct: 241 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVS 300

Query: 301 RAAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNI 360
           RAAEL+KLLVECNFPSICIHSGMSQEERLTRYK FKEGHKRILVATDLVGRGIDIERVNI
Sbjct: 301 RAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNI 360

Query: 361 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQI 420
           VINYDMPDSADTYLHRVGRAGRFGTKGLAITFV+SA+DS+VLN VQERFEVDIKELPEQI
Sbjct: 361 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVASASDSEVLNQVQERFEVDIKELPEQI 420

Query: 421 DTSTYMPS 428
           DTSTYMPS
Sbjct: 421 DTSTYMPS 427

[Close]

BLAST of CaUC08G152910 vs. ExPASy Swiss-Prot
Match: Q9LFN6 (DEAD-box ATP-dependent RNA helicase 56 OS=Arabidopsis thaliana OX=3702 GN=RH56 PE=1 SV=2)

HSP 1 Score: 800.4 bits (2066), Expect = 9.7e-231
Identity = 403/428 (94.16%), Postives = 416/428 (97.20%), Query Frame = 0


Query: 1   MGETRDNE-YEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLR 60
           MG+ RDNE YEEELLDYEEE+EK PDS G KVNGEA KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1   MGDARDNEAYEEELLDYEEEDEKVPDS-GNKVNGEAVKKGYVGIHSSGFRDFLLKPELLR 60

Query: 61  AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALV 120
           AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQI+P  GQVSALV
Sbjct: 61  AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSALV 120

Query: 121 LCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILA 180
           LCHTRELAYQIC+EF RFSTYLPD KV+VFYGGVNIKIHKDLLKNECPHIVVGTPGR+LA
Sbjct: 121 LCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLA 180

Query: 181 LSRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 240
           L+R+KDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV
Sbjct: 181 LAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 240

Query: 241 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVN 300
           CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSV+
Sbjct: 241 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVS 300

Query: 301 RAAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNI 360
           RAAEL+KLLVECNFPSICIHSGMSQEERLTRYK FKEGHKRILVATDLVGRGIDIERVNI
Sbjct: 301 RAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNI 360

Query: 361 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQI 420
           VINYDMPDSADTYLHRVGRAGRFGTKGLAITFV+SA+DS+VLN VQERFEVDIKELPEQI
Sbjct: 361 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVASASDSEVLNQVQERFEVDIKELPEQI 420

Query: 421 DTSTYMPS 428
           DTSTYMPS
Sbjct: 421 DTSTYMPS 427

[Close]

BLAST of CaUC08G152910 vs. ExPASy Swiss-Prot
Match: Q5JK84 (DEAD-box ATP-dependent RNA helicase 15 OS=Oryza sativa subsp. japonica OX=39947 GN=AIP2 PE=1 SV=1)

HSP 1 Score: 762.7 bits (1968), Expect = 2.2e-219
Identity = 385/428 (89.95%), Postives = 402/428 (93.93%), Query Frame = 0


Query: 3   ETRDNE-YEEELLDYEEEEEKAPDSVGAKVNGEAG--KKGYVGIHSSGFRDFLLKPELLR 62
           E +DNE YEE+L+DYEEE E   D   A  N  A   KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 5   EVKDNEVYEEDLVDYEEEVENGADGGAAAANASADVVKKGYVGIHSSGFRDFLLKPELLR 64

Query: 63  AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALV 122
           AI D GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLS+LQQIDPVAGQV ALV
Sbjct: 65  AIQDCGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDPVAGQVGALV 124

Query: 123 LCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILA 182
           LCHTRELAYQICHEFERFS YLP++KVAVFYGGV+IK HKDLLKN+CPHIVVGTPGRILA
Sbjct: 125 LCHTRELAYQICHEFERFSKYLPEVKVAVFYGGVHIKKHKDLLKNDCPHIVVGTPGRILA 184

Query: 183 LSRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 242
           L+R+KDLSLKNVRHFILDECDKML+SLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV
Sbjct: 185 LAREKDLSLKNVRHFILDECDKMLDSLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 244

Query: 243 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVN 302
           CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSE EKNRKLNDLLDALDFNQVVIFVKSV+
Sbjct: 245 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEAEKNRKLNDLLDALDFNQVVIFVKSVS 304

Query: 303 RAAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNI 362
           RAAEL+KLL ECNFP+I IHSGM+QEERLTRYK FKEGHKRILVATDLVGRGIDIERVNI
Sbjct: 305 RAAELNKLLCECNFPAISIHSGMTQEERLTRYKNFKEGHKRILVATDLVGRGIDIERVNI 364

Query: 363 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQI 422
           VINYDMPDSAD+YLHRVGRAGRFGTKGLAITFVSSA+DSDVLN VQERFEVDIKELPEQI
Sbjct: 365 VINYDMPDSADSYLHRVGRAGRFGTKGLAITFVSSASDSDVLNQVQERFEVDIKELPEQI 424

Query: 423 DTSTYMPS 428
           DTSTYMPS
Sbjct: 425 DTSTYMPS 432

[Close]

BLAST of CaUC08G152910 vs. ExPASy Swiss-Prot
Match: Q0JM17 (DEAD-box ATP-dependent RNA helicase 56 OS=Oryza sativa subsp. japonica OX=39947 GN=AIP1 PE=1 SV=2)

HSP 1 Score: 760.4 bits (1962), Expect = 1.1e-218
Identity = 384/428 (89.72%), Postives = 401/428 (93.69%), Query Frame = 0


Query: 3   ETRDNE-YEEELLDYEEEEEKAPDSVGAKVNGEAG--KKGYVGIHSSGFRDFLLKPELLR 62
           E +DNE YEE+L+DYEEE E   D      N  A   KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 5   EVKDNEVYEEDLVDYEEEVENGTDGGANAANASADVVKKGYVGIHSSGFRDFLLKPELLR 64

Query: 63  AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALV 122
           AI D GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLS+LQQIDPVAGQV ALV
Sbjct: 65  AIQDCGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDPVAGQVGALV 124

Query: 123 LCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILA 182
           LCHTRELAYQICHEFERFS YLP++KVAVFYGGV+IK HKDLLKN+CPHIVVGTPGRILA
Sbjct: 125 LCHTRELAYQICHEFERFSKYLPEVKVAVFYGGVHIKKHKDLLKNDCPHIVVGTPGRILA 184

Query: 183 LSRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 242
           L+R+KDLSLKNVRHFILDECDKML+SLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV
Sbjct: 185 LAREKDLSLKNVRHFILDECDKMLDSLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 244

Query: 243 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVN 302
           CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSE EKNRKLNDLLDALDFNQVVIFVKSV+
Sbjct: 245 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEAEKNRKLNDLLDALDFNQVVIFVKSVS 304

Query: 303 RAAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNI 362
           RAAEL+KLL ECNFP+I IHSGM+QEERLTRYK FKEGHKRILVATDLVGRGIDIERVNI
Sbjct: 305 RAAELNKLLCECNFPAISIHSGMTQEERLTRYKNFKEGHKRILVATDLVGRGIDIERVNI 364

Query: 363 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQI 422
           VINYDMPDSAD+YLHRVGRAGRFGTKGLAITFVSSA+DSDVLN VQERFEVDIKELPEQI
Sbjct: 365 VINYDMPDSADSYLHRVGRAGRFGTKGLAITFVSSASDSDVLNQVQERFEVDIKELPEQI 424

Query: 423 DTSTYMPS 428
           DTSTYMPS
Sbjct: 425 DTSTYMPS 432

[Close]

BLAST of CaUC08G152910 vs. ExPASy Swiss-Prot
Match: Q5WR10 (Spliceosome RNA helicase DDX39B OS=Canis lupus familiaris OX=9615 GN=DDX39B PE=3 SV=1)

HSP 1 Score: 625.2 bits (1611), Expect = 5.6e-178
Identity = 309/422 (73.22%), Postives = 365/422 (86.49%), Query Frame = 0


Query: 6   DNEYEEELLDYEEEE-EKAPDSVGAKVNGEAGKKG-YVGIHSSGFRDFLLKPELLRAIVD 65
           +N+ + ELLDYEE+E E A    G++   +   KG YV IHSSGFRDFLLKPELLRAIVD
Sbjct: 3   ENDVDNELLDYEEDEVETAAGGDGSEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAIVD 62

Query: 66  SGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVLCHT 125
            GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ++PV GQVS LV+CHT
Sbjct: 63  CGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHT 122

Query: 126 RELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILALSRD 185
           RELA+QI  E+ERFS Y+P++KVAVF+GG++IK  +++LK  CPHIVVGTPGRILAL+R+
Sbjct: 123 RELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARN 182

Query: 186 KDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKF 245
           K L+LK+++HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATLSKEIRPVC+KF
Sbjct: 183 KSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKF 242

Query: 246 MQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVNRAAE 305
           MQDPMEI+VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKSV R   
Sbjct: 243 MQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIA 302

Query: 306 LDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIVINY 365
           L +LLVE NFP+I IH GM QEERL+RY+ FK+  +RILVAT+L GRG+DIERVNI  NY
Sbjct: 303 LAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNY 362

Query: 366 DMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQIDTST 425
           DMP+ +DTYLHRV RAGRFGTKGLAITFVS   D+ +LN+VQ+RFEV+I ELP++ID S+
Sbjct: 363 DMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEIDISS 422

[Close]

BLAST of CaUC08G152910 vs. ExPASy TrEMBL
Match: A0A1S3BC35 (DEAD-box ATP-dependent RNA helicase 56 OS=Cucumis melo OX=3656 GN=LOC103488306 PE=4 SV=1)

HSP 1 Score: 852.8 bits (2202), Expect = 6.1e-244
Identity = 427/427 (100.00%), Postives = 427/427 (100.00%), Query Frame = 0


Query: 1   MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRA 60
           MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRA
Sbjct: 1   MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRA 60

Query: 61  IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL 120
           IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL
Sbjct: 61  IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL 120

Query: 121 CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL 180
           CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL
Sbjct: 121 CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL 180

Query: 181 SRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC 240
           SRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC
Sbjct: 181 SRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC 240

Query: 241 KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVNR 300
           KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVNR
Sbjct: 241 KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVNR 300

Query: 301 AAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIV 360
           AAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIV
Sbjct: 301 AAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIV 360

Query: 361 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQID 420
           INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQID
Sbjct: 361 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQID 420

Query: 421 TSTYMPS 428
           TSTYMPS
Sbjct: 421 TSTYMPS 427

[Close]

BLAST of CaUC08G152910 vs. ExPASy TrEMBL
Match: A0A6J1BTR7 (DEAD-box ATP-dependent RNA helicase 56 OS=Momordica charantia OX=3673 GN=LOC111004723 PE=4 SV=1)

HSP 1 Score: 852.8 bits (2202), Expect = 6.1e-244
Identity = 427/427 (100.00%), Postives = 427/427 (100.00%), Query Frame = 0


Query: 1   MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRA 60
           MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRA
Sbjct: 1   MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRA 60

Query: 61  IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL 120
           IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL
Sbjct: 61  IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL 120

Query: 121 CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL 180
           CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL
Sbjct: 121 CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL 180

Query: 181 SRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC 240
           SRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC
Sbjct: 181 SRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC 240

Query: 241 KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVNR 300
           KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVNR
Sbjct: 241 KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVNR 300

Query: 301 AAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIV 360
           AAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIV
Sbjct: 301 AAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIV 360

Query: 361 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQID 420
           INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQID
Sbjct: 361 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQID 420

Query: 421 TSTYMPS 428
           TSTYMPS
Sbjct: 421 TSTYMPS 427

[Close]

BLAST of CaUC08G152910 vs. ExPASy TrEMBL
Match: A0A5A7VBE2 (DEAD-box ATP-dependent RNA helicase 56-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G002460 PE=4 SV=1)

HSP 1 Score: 852.8 bits (2202), Expect = 6.1e-244
Identity = 427/427 (100.00%), Postives = 427/427 (100.00%), Query Frame = 0


Query: 1   MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRA 60
           MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRA
Sbjct: 1   MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRA 60

Query: 61  IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL 120
           IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL
Sbjct: 61  IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL 120

Query: 121 CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL 180
           CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL
Sbjct: 121 CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL 180

Query: 181 SRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC 240
           SRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC
Sbjct: 181 SRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC 240

Query: 241 KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVNR 300
           KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVNR
Sbjct: 241 KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVNR 300

Query: 301 AAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIV 360
           AAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIV
Sbjct: 301 AAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIV 360

Query: 361 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQID 420
           INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQID
Sbjct: 361 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQID 420

Query: 421 TSTYMPS 428
           TSTYMPS
Sbjct: 421 TSTYMPS 427

[Close]

BLAST of CaUC08G152910 vs. ExPASy TrEMBL
Match: A0A0A0LSH7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G381720 PE=4 SV=1)

HSP 1 Score: 852.8 bits (2202), Expect = 6.1e-244
Identity = 427/427 (100.00%), Postives = 427/427 (100.00%), Query Frame = 0


Query: 1   MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRA 60
           MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRA
Sbjct: 1   MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRA 60

Query: 61  IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL 120
           IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL
Sbjct: 61  IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL 120

Query: 121 CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL 180
           CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL
Sbjct: 121 CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL 180

Query: 181 SRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC 240
           SRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC
Sbjct: 181 SRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC 240

Query: 241 KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVNR 300
           KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVNR
Sbjct: 241 KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVNR 300

Query: 301 AAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIV 360
           AAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIV
Sbjct: 301 AAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIV 360

Query: 361 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQID 420
           INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQID
Sbjct: 361 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQID 420

Query: 421 TSTYMPS 428
           TSTYMPS
Sbjct: 421 TSTYMPS 427

[Close]

BLAST of CaUC08G152910 vs. ExPASy TrEMBL
Match: A0A6J1HBG9 (DEAD-box ATP-dependent RNA helicase 56 OS=Cucurbita moschata OX=3662 GN=LOC111462573 PE=4 SV=1)

HSP 1 Score: 850.9 bits (2197), Expect = 2.3e-243
Identity = 426/427 (99.77%), Postives = 427/427 (100.00%), Query Frame = 0


Query: 1   MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRA 60
           MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRA
Sbjct: 1   MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRA 60

Query: 61  IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL 120
           IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL
Sbjct: 61  IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL 120

Query: 121 CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL 180
           CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL
Sbjct: 121 CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL 180

Query: 181 SRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC 240
           SRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC
Sbjct: 181 SRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC 240

Query: 241 KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVNR 300
           KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSV+R
Sbjct: 241 KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSR 300

Query: 301 AAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIV 360
           AAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIV
Sbjct: 301 AAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIV 360

Query: 361 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQID 420
           INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQID
Sbjct: 361 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQID 420

Query: 421 TSTYMPS 428
           TSTYMPS
Sbjct: 421 TSTYMPS 427

[Close]

BLAST of CaUC08G152910 vs. TAIR 10
Match: AT5G11200.1 (DEAD/DEAH box RNA helicase family protein )

HSP 1 Score: 800.4 bits (2066), Expect = 6.9e-232
Identity = 403/428 (94.16%), Postives = 416/428 (97.20%), Query Frame = 0


Query: 1   MGETRDNE-YEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLR 60
           MG+ RDNE YEEELLDYEEE+EK PDS G KVNGEA KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1   MGDARDNEAYEEELLDYEEEDEKVPDS-GNKVNGEAVKKGYVGIHSSGFRDFLLKPELLR 60

Query: 61  AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALV 120
           AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQI+P  GQVSALV
Sbjct: 61  AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSALV 120

Query: 121 LCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILA 180
           LCHTRELAYQIC+EF RFSTYLPD KV+VFYGGVNIKIHKDLLKNECPHIVVGTPGR+LA
Sbjct: 121 LCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLA 180

Query: 181 LSRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 240
           L+R+KDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV
Sbjct: 181 LAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 240

Query: 241 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVN 300
           CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSV+
Sbjct: 241 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVS 300

Query: 301 RAAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNI 360
           RAAEL+KLLVECNFPSICIHSGMSQEERLTRYK FKEGHKRILVATDLVGRGIDIERVNI
Sbjct: 301 RAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNI 360

Query: 361 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQI 420
           VINYDMPDSADTYLHRVGRAGRFGTKGLAITFV+SA+DS+VLN VQERFEVDIKELPEQI
Sbjct: 361 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVASASDSEVLNQVQERFEVDIKELPEQI 420

Query: 421 DTSTYMPS 428
           DTSTYMPS
Sbjct: 421 DTSTYMPS 427

[Close]

BLAST of CaUC08G152910 vs. TAIR 10
Match: AT5G11170.1 (DEAD/DEAH box RNA helicase family protein )

HSP 1 Score: 800.4 bits (2066), Expect = 6.9e-232
Identity = 403/428 (94.16%), Postives = 416/428 (97.20%), Query Frame = 0


Query: 1   MGETRDNE-YEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLR 60
           MG+ RDNE YEEELLDYEEE+EK PDS G KVNGEA KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1   MGDARDNEAYEEELLDYEEEDEKVPDS-GNKVNGEAVKKGYVGIHSSGFRDFLLKPELLR 60

Query: 61  AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALV 120
           AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQI+P  GQVSALV
Sbjct: 61  AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSALV 120

Query: 121 LCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILA 180
           LCHTRELAYQIC+EF RFSTYLPD KV+VFYGGVNIKIHKDLLKNECPHIVVGTPGR+LA
Sbjct: 121 LCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLA 180

Query: 181 LSRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 240
           L+R+KDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV
Sbjct: 181 LAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 240

Query: 241 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVN 300
           CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSV+
Sbjct: 241 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVS 300

Query: 301 RAAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNI 360
           RAAEL+KLLVECNFPSICIHSGMSQEERLTRYK FKEGHKRILVATDLVGRGIDIERVNI
Sbjct: 301 RAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNI 360

Query: 361 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQI 420
           VINYDMPDSADTYLHRVGRAGRFGTKGLAITFV+SA+DS+VLN VQERFEVDIKELPEQI
Sbjct: 361 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVASASDSEVLNQVQERFEVDIKELPEQI 420

Query: 421 DTSTYMPS 428
           DTSTYMPS
Sbjct: 421 DTSTYMPS 427

[Close]

BLAST of CaUC08G152910 vs. TAIR 10
Match: AT5G11200.3 (DEAD/DEAH box RNA helicase family protein )

HSP 1 Score: 780.4 bits (2014), Expect = 7.4e-226
Identity = 403/469 (85.93%), Postives = 416/469 (88.70%), Query Frame = 0


Query: 1   MGETRDNE-YEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLR 60
           MG+ RDNE YEEELLDYEEE+EK PDS G KVNGEA KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1   MGDARDNEAYEEELLDYEEEDEKVPDS-GNKVNGEAVKKGYVGIHSSGFRDFLLKPELLR 60

Query: 61  AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALV 120
           AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQI+P  GQVSALV
Sbjct: 61  AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSALV 120

Query: 121 LCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILA 180
           LCHTRELAYQIC+EF RFSTYLPD KV+VFYGGVNIKIHKDLLKNECPHIVVGTPGR+LA
Sbjct: 121 LCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLA 180

Query: 181 LSRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 240
           L+R+KDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV
Sbjct: 181 LAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 240

Query: 241 CKKFMQ-----------------------------------------DPMEIYVDDEAKL 300
           CKKFMQ                                         DPMEIYVDDEAKL
Sbjct: 241 CKKFMQDGLRTLSGDSVALWWVGFGSGYCVFPRFHRARMGLNVPSNIDPMEIYVDDEAKL 300

Query: 301 TLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVNRAAELDKLLVECNFPSICI 360
           TLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSV+RAAEL+KLLVECNFPSICI
Sbjct: 301 TLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICI 360

Query: 361 HSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGR 420
           HSGMSQEERLTRYK FKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGR
Sbjct: 361 HSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGR 420

Query: 421 AGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQIDTSTYMPS 428
           AGRFGTKGLAITFV+SA+DS+VLN VQERFEVDIKELPEQIDTSTYMPS
Sbjct: 421 AGRFGTKGLAITFVASASDSEVLNQVQERFEVDIKELPEQIDTSTYMPS 468

[Close]

BLAST of CaUC08G152910 vs. TAIR 10
Match: AT5G11200.2 (DEAD/DEAH box RNA helicase family protein )

HSP 1 Score: 773.5 bits (1996), Expect = 9.0e-224
Identity = 403/487 (82.75%), Postives = 416/487 (85.42%), Query Frame = 0


Query: 1   MGETRDNE-YEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLR 60
           MG+ RDNE YEEELLDYEEE+EK PDS G KVNGEA KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1   MGDARDNEAYEEELLDYEEEDEKVPDS-GNKVNGEAVKKGYVGIHSSGFRDFLLKPELLR 60

Query: 61  AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALV 120
           AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQI+P  GQVSALV
Sbjct: 61  AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSALV 120

Query: 121 LCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILA 180
           LCHTRELAYQIC+EF RFSTYLPD KV+VFYGGVNIKIHKDLLKNECPHIVVGTPGR+LA
Sbjct: 121 LCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLA 180

Query: 181 LSRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 240
           L+R+KDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV
Sbjct: 181 LAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 240

Query: 241 CKKFMQD----------------------------------------------------- 300
           CKKFMQD                                                     
Sbjct: 241 CKKFMQDFLENETVSVRLFSFGVENSEWRLCSFGFIVLVWVSMFRAILMFHSKTHIFEEK 300

Query: 301 ------PMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVNR 360
                 PMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSV+R
Sbjct: 301 RWTRISPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSR 360

Query: 361 AAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIV 420
           AAEL+KLLVECNFPSICIHSGMSQEERLTRYK FKEGHKRILVATDLVGRGIDIERVNIV
Sbjct: 361 AAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIV 420

Query: 421 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQID 428
           INYDMPDSADTYLHRVGRAGRFGTKGLAITFV+SA+DS+VLN VQERFEVDIKELPEQID
Sbjct: 421 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVASASDSEVLNQVQERFEVDIKELPEQID 480

[Close]

BLAST of CaUC08G152910 vs. TAIR 10
Match: AT5G11170.2 (DEAD/DEAH box RNA helicase family protein )

HSP 1 Score: 659.4 bits (1700), Expect = 1.9e-189
Identity = 327/344 (95.06%), Postives = 338/344 (98.26%), Query Frame = 0


Query: 84  MDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVLCHTRELAYQICHEFERFSTYLPD 143
           MDVICQAKSGMGKTAVFVLSTLQQI+P  GQVSALVLCHTRELAYQIC+EF RFSTYLPD
Sbjct: 1   MDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSALVLCHTRELAYQICNEFVRFSTYLPD 60

Query: 144 LKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILALSRDKDLSLKNVRHFILDECDKML 203
            KV+VFYGGVNIKIHKDLLKNECPHIVVGTPGR+LAL+R+KDLSLKNVRHFILDECDKML
Sbjct: 61  TKVSVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLALAREKDLSLKNVRHFILDECDKML 120

Query: 204 ESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGL 263
           ESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGL
Sbjct: 121 ESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGL 180

Query: 264 VQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVNRAAELDKLLVECNFPSICIHSGMS 323
           VQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSV+RAAEL+KLLVECNFPSICIHSGMS
Sbjct: 181 VQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMS 240

Query: 324 QEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFG 383
           QEERLTRYK FKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFG
Sbjct: 241 QEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFG 300

Query: 384 TKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQIDTSTYMPS 428
           TKGLAITFV+SA+DS+VLN VQERFEVDIKELPEQIDTSTYMPS
Sbjct: 301 TKGLAITFVASASDSEVLNQVQERFEVDIKELPEQIDTSTYMPS 344

The following BLAST results are available for this feature:

BLAST of CaUC08G152910 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004138728.2	1.3e-243	100.00	DEAD-box ATP-dependent RNA helicase 56 [Cucumis sativus] >XP_008445205.1 PREDICT...	[more]
XP_022961952.1	4.8e-243	99.77	DEAD-box ATP-dependent RNA helicase 56 [Cucurbita moschata] >XP_022961953.1 DEAD...	[more]
KAG6598572.1	4.8e-243	99.77	DEAD-box ATP-dependent RNA helicase 56, partial [Cucurbita argyrosperma subsp. s...	[more]
KAG6585467.1	1.1e-242	99.53	DEAD-box ATP-dependent RNA helicase 56, partial [Cucurbita argyrosperma subsp. s...	[more]
XP_022951402.1	1.1e-242	99.53	DEAD-box ATP-dependent RNA helicase 56-like [Cucurbita moschata] >XP_022951403.1...	[more]

BLAST of CaUC08G152910 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q56XG6	9.7e-231	94.16	DEAD-box ATP-dependent RNA helicase 15 OS=Arabidopsis thaliana OX=3702 GN=RH15 P...	[more]
Q9LFN6	9.7e-231	94.16	DEAD-box ATP-dependent RNA helicase 56 OS=Arabidopsis thaliana OX=3702 GN=RH56 P...	[more]
Q5JK84	2.2e-219	89.95	DEAD-box ATP-dependent RNA helicase 15 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q0JM17	1.1e-218	89.72	DEAD-box ATP-dependent RNA helicase 56 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q5WR10	5.6e-178	73.22	Spliceosome RNA helicase DDX39B OS=Canis lupus familiaris OX=9615 GN=DDX39B PE=3...	[more]

BLAST of CaUC08G152910 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BC35	6.1e-244	100.00	DEAD-box ATP-dependent RNA helicase 56 OS=Cucumis melo OX=3656 GN=LOC103488306 P...	[more]
A0A6J1BTR7	6.1e-244	100.00	DEAD-box ATP-dependent RNA helicase 56 OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A5A7VBE2	6.1e-244	100.00	DEAD-box ATP-dependent RNA helicase 56-like isoform X1 OS=Cucumis melo var. maku...	[more]
A0A0A0LSH7	6.1e-244	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G381720 PE=4 SV=1	[more]
A0A6J1HBG9	2.3e-243	99.77	DEAD-box ATP-dependent RNA helicase 56 OS=Cucurbita moschata OX=3662 GN=LOC11146...	[more]

BLAST of CaUC08G152910 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G11200.1	6.9e-232	94.16	DEAD/DEAH box RNA helicase family protein	[more]
AT5G11170.1	6.9e-232	94.16	DEAD/DEAH box RNA helicase family protein	[more]
AT5G11200.3	7.4e-226	85.93	DEAD/DEAH box RNA helicase family protein	[more]
AT5G11200.2	9.0e-224	82.75	DEAD/DEAH box RNA helicase family protein	[more]
AT5G11170.2	1.9e-189	95.06	DEAD/DEAH box RNA helicase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 302..383 e-value: 1.3E-30 score: 117.7
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 276..383 e-value: 1.6E-27 score: 96.1
IPR001650	Helicase, C-terminal	PROSITE	PS51194	HELICASE_CTER	coord: 278..423 score: 22.738335
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 65..266 e-value: 1.8E-53 score: 193.6
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 77..250 score: 25.856627
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 259..426 e-value: 1.0E-53 score: 183.0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 42..258 e-value: 1.5E-73 score: 248.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 115..394
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 71..236 e-value: 8.2E-38 score: 129.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	PANTHER	PTHR47958	ATP-DEPENDENT RNA HELICASE DBP3	coord: 27..422
None	No IPR available	PANTHER	PTHR47958:SF15	DEAD-BOX ATP-DEPENDENT RNA HELICASE 56-LIKE	coord: 27..422
None	No IPR available	CDD	cd18787	SF2_C_DEAD	coord: 263..392 e-value: 1.36833E-56 score: 180.781
None	No IPR available	CDD	cd17950	DEADc_DDX39	coord: 45..252 e-value: 3.77042E-163 score: 455.651
IPR014014	RNA helicase, DEAD-box type, Q motif	PROSITE	PS51195	Q_MOTIF	coord: 46..74 score: 9.66548

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC08G152910.1	CaUC08G152910.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003724	RNA helicase activity
molecular_function	GO:0003676	nucleic acid binding