CaUC08G151480 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC08G151480
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionCytochrome c550
LocationCiama_Chr08: 23198583 .. 23205130 (-)
RNA-Seq ExpressionCaUC08G151480
SyntenyCaUC08G151480
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TTGCCAATCTGCGATGGCACTGGACCCGAGAGAAGATTGTTGCTGAGATCAAGCTTCACCAGATTGGCTGCTCCTGAAATCTCTGGTGGTATAACTCCAGAAATCCTGTTTCCTTGTAAGAACAACTCTGACAAGTTTCTTGCCTGTGAGATAGAATTTGAAATGGAACCAGTGAGATTATTATGAGCAACATCAATAATTGAAACATGGGGGAGACCCAAAACTCCTTCAGGAATTGTTCCTATCAACTGATTGAAACTAATCCTAAACCTTAAAAGTGATATGCATTCAGCAAAACTTGCTGGTATTTCTCCAGAAAGCCTATTTTGCAGGACAAGAAAGTATAGCAATTTCCCTCCTCTGCATATGTCCAATGGCAATGGCCCCGACAGGCGATTTTCCGACAAGTCAAGGACAACCATTGGTGAGAACTTCCCCAACTTTTGTGGAATCTGTCCAGTAAGAAAATTGTCATAAAGTGATAGCATAGTGAGTGTTGTTGAGTTGGCTAGTACACTTGGGATCTCTCCTGTGAGGCTATTGTTGTAAATCTGTAGAACTTTAAGCTTAGGAAGTTTACAAATGGATTCTGGAAGCTCTCCTGTCAAAAGGTTCACTGACATGTCCATGTCCACAAGCTCTGTTAAATTTCCAAGCTCCTCTGGTATGTTTCCTGTGAGTTCATTGTAATAGAGTTCAAGTTGTTGCAAGTTCTTCAGCAAGGAGATTTCTCTTGGAATCTCTCCCTTGAGAAAGTTCCCACTTAGTTCAAGATCAACAAGAGACGTCATGTTCCCTATCGATCGGGGGATTTCACCATCTAACATGCAGGTTGTCAACACCATAGATTTCAGCTTCGTCAGGCTGGAGATCTTCTCAGGCAACTTCCATAAGTTGAGGTTGTAGTTCTCATTGAAATTCAGCACCTCAAGATTATCAAGGTCGAAAACCGACATGGGAAAATCACCGGTAAAGAAATTGTACGAGAGGTCGAGTACACGCAGTTGTTTCATTTGCGATAAATCTGGGATAGTTCCATTGAGATACAAAGAGCTCATGTTAAGTTCTTCAATGAGAGAGCAGTTGGTGATTCCTGAAGGAAAACGTCCGTAGAAACTGGTACCAGCGAGACGAAGAACTCTCAGCTCTGGCAAGTAAGAACATACATCTTCTGGAAAGCTACCAGACAGTGACTGGCCAGTGATATCAATCTCGACAACGTGACCTCGGTCATTGCACCGGATTCCAGTGAAGCTGCAGAAAGATTTGCCTCCTGAAAGATCCCAATCAGACAGGAAGTCTCCTGAGGCAGTCTTTTGCATGAGATAAAAGAACTGAGATTGGTTGTTAGTAGCAGAAGTAGTAAGAGCTTGAGAAGAAGAGAAGGAGAAAGTAGTGAAGAACAAAAGAAGAAAGAAAGCTGAGTGGAAAGCCATGATTGATACAAGGTAGAAATTTGAGATGATTATGATGATGAGAAGTGAAGGAGGCAAGGCAAGATGGGAGAATATAAATGGGGATTCAAAATGGTGCAGCAGCAGTACAGTAACAAAGCCTTGATAATGAAAAAGAAAGGTGACAAGAAAATGTAAATAAAAAAGAAAAGGTTCCTGCAAGTGTACTGAGAGAATGGGAGAAAGAAAGAAAGAAAGGGAAAAAAAGGTAGAATGAGAGAGAAAGAGAGGTCAGGGGTAGAGATACATAGCTTTGTATAAAGAAACTTTATGTTTATACTCCACTATATGTTGTTGTGGAGAATATAACATCTTGAAATGAAAAAGTTTAGACTTAAAAGGAAAAAAAAAAGGAAAAAAAAAAAAAAGGGAAACAGAAAAGAAAGATTTGAACAAGTTTGAACAAACTACCTGAGATTCACCCATGGTTTTTATTTCAACGGTGGTTTGCTGAACAGAAAGTAGAAGCTGAGGTAGCTTGAGATGAGTCCATGTACAAAAACAGGTATGGTGTCTAAAATTCTTCTTTGTTTTGTTTTGTTTTTTTCACCTCAAAATCCATTTCTAACAGCATTAATGGTCTAACTAATTAATCACTTTGCATAAGTTCATCCTTTGCCCTCTCCACTACACTATATTGGACCTTCAAATCATGCCTTCCCCCACTTCCATTTTCATTTTCATACCCCCAAATCTACCCATATCTTTTATGGCATTTCAATATTTGGTTGGATAATACCGACCTAGATTGACCTAGCTAGTGATCACTAACTACTAAGGACCATGTATTTTATAGAAAGAGCTTACAGGGAATGAGTTCAATCCATCGTTGCCAACAACTTGAGATTTAACATCCTAAGTTTCTAGCGTCTAAAACGTTGTCGAATCAAACAATTTATGTTGTGAGATTAATCGAGGTGTGTGCAAGAGTAACATGGTTTTGCTCGTAAGATCTAACTTGGTTGATTTTGCATGTTATTTTTAATAAAGGTGTAAATTCCCACTAGCATTTTTTATCCATCAAAGCTCACTAGTGGTAGCTTTGTGGAACACAGGTTTCAGTAACTTTCATCTTTCAGTCCTACTTTCTAAAATCATAAGCTCCTTGATTGTAAATTTCAGTGGGATAGTTTAATATTTTACTTGCTTACAAATCAACCGATGGTAGTTTTTATAGTTTGCTCATCATTATTAACAGCCCATACTTTTCTTTCTAGGCTTTTGTGGGTCATGGATCCACAATTTTCTACTATAGCAGCAGCAGCCCATTCTCATTTGAGTCAAAACCATCCAAATTTCTGTTGCTGTTCCATTGTTTATATGACAGAAAGATTACTGAGATGAAACAAATGTCAATGAAGGAACAACCCCATTTTATTCAGTATTTTAACACATTTACTTTAGTTTTAATCAATAATTAATCAAGGTTATGGTCCTTGATATTTCTTTGCATATAGACAAATAGTTTTTTTGAAAACATTCAAAAAAATGTTCAAAAAGGTTTCTAAAGTGCCTTTGGAATAAATATACAAGTGTTTATTAAAAAGTTTCATGTAAAATCCTTAATTTAAGTTCCCTTTTATTCTCTTTTGGTGTTTTCTTTTAGAGAAAAATATCGGCCAACCATTTTCTATGGGGGAGGAATTCAAACTTTGGTAGGAAATGTTAAACCATTCTTTAACAAATCATTTGGTTTAAGTGAGAGAATGAACCTCTAACAGGATAACTCTGGTTTGACGTTTGAATCGTTAGTTACATATGTTGTTGAAACAAACAAACTCGAATATAAACTTTGTTCTCCAGTATGAATATAAGCTTTTAGGCTCACTTATTTATAATTTTGGAGTTAGTGAGAGTTGGCCTAGTGGTTCAAACTCACCACACACAATTCAAAAACTCTTAAAACCTACATCGCTCATTCACAGCTACCAAATATTTCAAAGATTAGATTCAAATGAAACCCAAAATCCATTTATTGGTGACTCATATTGTTCTTGTTCTCTGCAAATCTCTCTGCACGCCCCATCGTCTAATCCGCAATTGAAACTCCGTCGCCGCTGCTAAAAGCCTTAGTGTTTGATCAGTCCTCAGAATCTCCATAACCCGTTTCATCGTCGACCCTCGAAGCAAATCGGCGCCATCGAAAACCCCCAACATCCCAATTTTGAGCTCCTCAATCGCATTCTCCATTTCGGAAATCTCTCCATCCACCAGTCTCCCTGCTCGTCGTGCCAGTCCCACAATCGGCGGTGCCGCCACCGTCTCTTGTAAGCTAGCCATTGCCTCCGTCAAATCCCTCTCCTTCCGCTTGACATCGGCCTTCAGCTCCTCCATTGACGCCGCTTGCTCAGGCGTCAAATCCTTCACCGCTCCATCCACCAAACGAAACACAATTGAGGGCTTAAACCCAGAAATCCAAAGCAGAGTCCTCTCGTAAGAACTCAACCAAGGCGCTGAAAACACTCTGAACACATCCTCGCCGGCGGCCTTGGAAATTTCCTCGTGGTAAAGCTGGTAATGGGCTAAAACTTGATTGATTAGACCCAATTGGCGTTCTTCCTTGAAATCGCTGATTTGTAAAACGTGGGGAAGCTGTTCGAGAAAGCCTCGTTGGGTTTCCAACCAGGCGTTGTAAAAATCCCCAAAATTTTCGATAACAGAAGCAGACTGGGGTATTGGCCTAGATGGATTTGACATGATTAAATCCACGGCGGCGCCACTGTGAATCGGCCAATCCCCAGAAGGGGTAGTTAAAGGGAAATGGAAGAGGACGTTTATTTATAGAGAAACGGGGGGATTGGTTGTTGCTGCCAATTTGGGTTTCCTTTGAAGGAAAAGAAGCGATTGCTTCGTTGGTAAGAGTGCGGAGGTGCGGTGGTGGCAGTGGGTAATAGGAGGAAGGGAGTTAGTGAAACAGAGACTCGCCGTGTCGGTACGGCAATGTCGGCAGCTGGGGAAGAAAGGAGAGACACGTTTCTCCAATTAACTCGCCGGAAAAGAAAATATATTCTTTTGTGATTCGATTCTGTTTATATTTTCATAGATTTCCCGACTTTTATACTGTTTTATTTTTTTTTTCTTTCTTTTTTTTCTTTTTAAACTCAGGTATTGACTTGTAGGTAGGTAAAAAACATGTTTTTTAACCATGGATATTTTTACCACATACTGGAAAAAGTTTATTTTTTTCTTTTTTTTTTTTTTAAAGAAAAAAAAAAAAACAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTAAAGAAAAAAAAAAAAACAAAGTAGGAACAGAGGATTTGATCCACATATATCTTGGTTGTTAACATATCTATGTTTATTTTATCGAAAAAAACTTAATATGATATGTTTTGTTTTATGTATATGTAATTTTATTAAGGAGTTAAGAATTAGATATGAGATATTTGGTGGTTTGGATATGTTTATCTTGTAATTTAATTTTAAAGAATAGGTTAAATTACATTTATAGTCCATGAAGTTTAGGATTTTGTTTTAATTTAGTTTTTAAGTTTTGAGATTCTACAATCTTAAGTGGTAACATTTAGGAAATGTTCAATTTTAATCACTTTATTAACGACACTTTTAATCATAATTTTTAAAGTAAAGATTTACTGAAATAAATAAATAGTAACAATAGTGGTATCGTTAGCTGTCAGTCCTGAATCACCTGTTTCGACTTAGGTCCTTCCTTCTAGTCCTGGGAAGTTCCACGTAATCCTTAAATCAAGAAAGATTCTATTAACAGGTAACCGTTAAGCCAAAATAGTGGGCCTTCCTTGTCCTGCAGAGAGTTCGTCCCCTGTAGGTAAGCGTATTCTTCCGAAACTCTTCTTCTTATAGTTGATGTGATGGAAGCTAGGGCCATTCTTTAGCTTAAAGCTGAACAGAAAGCGCTAACCCCATAGTCTTTCTTTTATTATCGGCAGGTCGAGTACCGACCAATCTTATCTTCGGAGCCCTTGTTTCGAATGAGACAAGGTTCTCTTCCCGTTTTATGATAGTAGTAGTAGTAAATAAAGAATTAAAAAATATATATATTCCTCTCTTTCTTGTCTTCACACCCTTTTCCCTTGTCTCCATCCAACGATGCTTATTGTTTAGAACAAGGACATTCTTGATGTTCTAGTCGATGTTTCTTTTTTTTATTATTATTATTTTTGCAGTTTGAAATTGTGATATTTTTACATATAACAAAATGAGTCAAAATATTTATAAATATATCAAAATGTCATTATTTATCATGATAGACAATGGTAGATGTTTATCATTGTCTATCAATGATAGACACTAATAGATGCTAATAGATGTCTATGGGTGTATGTCGTTGTCTATCACTAATAGACAATTACATTTTGAAAATATTTTCAACATTTTTGTCATTTAAAATAATTACTCTTTCAAATTTAAAAATTGTTTTGGGGAATGGATAGATTTGTGGAAGAAAATATAGTAAGTTTTTTCCCTTCTCATTCCCTCTTTTCAAATTGAAGAAGAAGATTGCGAACGGTGGTGTTGGTCATCATCGGCAGGGCCGACTTCACTAGAGGTGAGAGGAGGGTGGAGGAGAAGAGAGAGAGAGAGTTATTT

mRNA sequence

TTGCCAATCTGCGATGGCACTGGACCCGAGAGAAGATTGTTGCTGAGATCAAGCTTCACCAGATTGGCTGCTCCTGAAATCTCTGGTGGTATAACTCCAGAAATCCTGTTTCCTTGTAAGAACAACTCTGACAAGACAAGAAAGTATAGCAATTTCCCTCCTCTGCATATGTCCAATGGCAATGGCCCCGACAGGCGATTTTCCGACAAGTCAAGGACAACCATTGGTGAGAACTTCCCCAACTTTTGTGGAATCTGTCCAGAAGTTTACAAATGGATTCTGGAAGCTCTCCTGTCAAAAGGTTCACTGACATGTCCATGTCCACAAGCTCTGTTAAATTTCCAAGCTCCTCTGAGTTCAAGTTGTTGCAAGTTCTTCAGCAAGGAGATTTCTCTTGGAATCTCTCCCTTGAGAAAGTTCCCACTTAGTTCAAGATCAACAAGAGACGTCATGTTCCCTATCGATCGGGGGATTTCACCATCTAACATGCAGGTTGTCAACACCATAGATTTCAGCTTCGTCAGGCTGGAGATCTTCTCAGGCAACTTCCATAAGTTGAGCACCTCAAGATTATCAAGGTCGAAAACCGACATGGGAAAATCACCGGTAAAGAAATTGTACGAGAGGTCGAGTACACGCAGTTGTTTCATTTGCGATAAATCTGGGATAGTTCCATTGAGATACAAAGAGCTCATGTTAAGTTCTTCAATGAGAGAGCAGTTGGCTTTTGTGGGTCATGGATCCACAATTTTCTACTATAGCAGCAGCAGCCCATTCTCATTTGAGTCAAAACCATCCAAATTTCTGTTGCTGTTCCATTGTTTATATGACAGAAAGATTACTGAGATGAAACAAATGTCAATGAAGGAACAACCCCATTTTATTCAAATCTCCATAACCCGTTTCATCGTCGACCCTCGAAGCAAATCGGCGCCATCGAAAACCCCCAACATCCCAATTTTGAGCTCCTCAATCGCATTCTCCATTTCGGAAATCTCTCCATCCACCAGTCTCCCTGCTCGTCGTGCCAGTCCCACAATCGGCGGTGCCGCCACCGTCTCTTGTAAGCTAGCCATTGCCTCCGTCAAATCCCTCTCCTTCCGCTTGACATCGGCCTTCAGCTCCTCCATTGACGCCGCTTGCTCAGGCGTCAAATCCTTCACCGCTCCATCCACCAAACGAAACACAATTGAGGGCTTAAACCCAGAAATCCAAAGCAGAGTCCTCTCGAAAAGAAGCGATTGCTTCGTTGGTAAGAGTGCGGAGGTGCGGTGGTGGCAGTGGGTAATAGGAGGAAGGGAGTTAGTGAAACAGAGACTCGCCGTGTCGGTACGGCAATGTCGGCAGCTGGGGAAGAAAGGAGAGACACGTCGAGTACCGACCAATCTTATCTTCGGAGCCCTTGTTTCGAATGAGACAAGAAGAAGATTGCGAACGGTGGTGTTGGTCATCATCGGCAGGGCCGACTTCACTAGAGGTGAGAGGAGGGTGGAGGAGAAGAGAGAGAGAGAGTTATTT

Coding sequence (CDS)

TTGCCAATCTGCGATGGCACTGGACCCGAGAGAAGATTGTTGCTGAGATCAAGCTTCACCAGATTGGCTGCTCCTGAAATCTCTGGTGGTATAACTCCAGAAATCCTGTTTCCTTGTAAGAACAACTCTGACAAGACAAGAAAGTATAGCAATTTCCCTCCTCTGCATATGTCCAATGGCAATGGCCCCGACAGGCGATTTTCCGACAAGTCAAGGACAACCATTGGTGAGAACTTCCCCAACTTTTGTGGAATCTGTCCAGAAGTTTACAAATGGATTCTGGAAGCTCTCCTGTCAAAAGGTTCACTGACATGTCCATGTCCACAAGCTCTGTTAAATTTCCAAGCTCCTCTGAGTTCAAGTTGTTGCAAGTTCTTCAGCAAGGAGATTTCTCTTGGAATCTCTCCCTTGAGAAAGTTCCCACTTAGTTCAAGATCAACAAGAGACGTCATGTTCCCTATCGATCGGGGGATTTCACCATCTAACATGCAGGTTGTCAACACCATAGATTTCAGCTTCGTCAGGCTGGAGATCTTCTCAGGCAACTTCCATAAGTTGAGCACCTCAAGATTATCAAGGTCGAAAACCGACATGGGAAAATCACCGGTAAAGAAATTGTACGAGAGGTCGAGTACACGCAGTTGTTTCATTTGCGATAAATCTGGGATAGTTCCATTGAGATACAAAGAGCTCATGTTAAGTTCTTCAATGAGAGAGCAGTTGGCTTTTGTGGGTCATGGATCCACAATTTTCTACTATAGCAGCAGCAGCCCATTCTCATTTGAGTCAAAACCATCCAAATTTCTGTTGCTGTTCCATTGTTTATATGACAGAAAGATTACTGAGATGAAACAAATGTCAATGAAGGAACAACCCCATTTTATTCAAATCTCCATAACCCGTTTCATCGTCGACCCTCGAAGCAAATCGGCGCCATCGAAAACCCCCAACATCCCAATTTTGAGCTCCTCAATCGCATTCTCCATTTCGGAAATCTCTCCATCCACCAGTCTCCCTGCTCGTCGTGCCAGTCCCACAATCGGCGGTGCCGCCACCGTCTCTTGTAAGCTAGCCATTGCCTCCGTCAAATCCCTCTCCTTCCGCTTGACATCGGCCTTCAGCTCCTCCATTGACGCCGCTTGCTCAGGCGTCAAATCCTTCACCGCTCCATCCACCAAACGAAACACAATTGAGGGCTTAAACCCAGAAATCCAAAGCAGAGTCCTCTCGAAAAGAAGCGATTGCTTCGTTGGTAAGAGTGCGGAGGTGCGGTGGTGGCAGTGGGTAATAGGAGGAAGGGAGTTAGTGAAACAGAGACTCGCCGTGTCGGTACGGCAATGTCGGCAGCTGGGGAAGAAAGGAGAGACACGTCGAGTACCGACCAATCTTATCTTCGGAGCCCTTGTTTCGAATGAGACAAGAAGAAGATTGCGAACGGTGGTGTTGGTCATCATCGGCAGGGCCGACTTCACTAGAGGTGAGAGGAGGGTGGAGGAGAAGAGAGAGAGAGAGTTATTT

Protein sequence

LPICDGTGPERRLLLRSSFTRLAAPEISGGITPEILFPCKNNSDKTRKYSNFPPLHMSNGNGPDRRFSDKSRTTIGENFPNFCGICPEVYKWILEALLSKGSLTCPCPQALLNFQAPLSSSCCKFFSKEISLGISPLRKFPLSSRSTRDVMFPIDRGISPSNMQVVNTIDFSFVRLEIFSGNFHKLSTSRLSRSKTDMGKSPVKKLYERSSTRSCFICDKSGIVPLRYKELMLSSSMREQLAFVGHGSTIFYYSSSSPFSFESKPSKFLLLFHCLYDRKITEMKQMSMKEQPHFIQISITRFIVDPRSKSAPSKTPNIPILSSSIAFSISEISPSTSLPARRASPTIGGAATVSCKLAIASVKSLSFRLTSAFSSSIDAACSGVKSFTAPSTKRNTIEGLNPEIQSRVLSKRSDCFVGKSAEVRWWQWVIGGRELVKQRLAVSVRQCRQLGKKGETRRVPTNLIFGALVSNETRRRLRTVVLVIIGRADFTRGERRVEEKRERELF
Homology
[Close]
BLAST of CaUC08G151480 vs. NCBI nr
Match: GER40230.1 (cytochrome c550 [Striga asiatica])

HSP 1 Score: 65.9 bits (159), Expect = 1.2e-06
Identity = 46/141 (32.62%), Postives = 55/141 (39.01%), Query Frame = 0 

Query: 1   LPICDGTGPERRLLLRSSFTRLAAPEISGGITPEILFPCKNNSDK--------------- 60
           LPI  G GP++R  LRS  TRL A  ISGGI PEI FPC  +SDK               
Sbjct: 119 LPISQGIGPDKRFALRSILTRLVAQAISGGILPEIRFPCMKSSDKFFAARISSGIGPVNL 178

Query: 61  ---------------------------------------TRKYSNFPPLHMSNGNGPDRR 88
                                                   R+  +FP L   +G+GPD  
Sbjct: 179 ANIPGGILPSKLLLLTRNRMSDSHSAYEAGISPEREFWRIRRNLSFPMLQSPSGSGPDSW 238

[Close]
BLAST of CaUC08G151480 vs. NCBI nr
Match: CAB3480813.1 (unnamed protein product [Digitaria exilis] >CAB3502634.1 unnamed protein product [Digitaria exilis])

HSP 1 Score: 65.1 bits (157), Expect = 2.0e-06
Identity = 55/167 (32.93%), Postives = 81/167 (48.50%), Query Frame = 0 

Query: 2   PICDGTGPERRLLLRSSFTRLAAPEISGGITPEILFPCKNNSDKTRKYSNFPPLHMSNGN 61
           PIC G  P +RL   SS  R  A  ++G   P+ LFP     + +R+Y    P HMS G 
Sbjct: 15  PICSGREPVKRLSEMSSCDRFVAMAMAGPTVPDSLFP-----ESSRRYRCGRP-HMSGGT 74

Query: 62  GPDR-RFSDKSRTTIGENFPNFCGICPEVYKWILEALLSKGSLTCPC---PQALLNFQAP 121
            P+   F  ++R ++  + P+  G+ P    + +    S  +L       P   L+ ++ 
Sbjct: 75  APESWLFGSRTRVSV-RHCPSSAGMGPTSSLFSIRTCSSFPALQSAAGIRPDIRLSDRSR 134

Query: 122 LSS--SCCKFFSKEISL-GISPLRKFPLSSRSTRDVMFPIDRGISPS 162
            SS  S C  FS   ++ GISP+R F   SR TR +  P D GISP+
Sbjct: 135 NSSGHSICTAFSNLATVAGISPVRLFVERSRLTRLLRLPTDAGISPT 174

[Close]
BLAST of CaUC08G151480 vs. NCBI nr
Match: PON56471.1 (hypothetical protein TorRG33x02_296220 [Trema orientale])

HSP 1 Score: 60.8 bits (146), Expect = 3.8e-05
Identity = 31/47 (65.96%), Postives = 32/47 (68.09%), Query Frame = 0 

Query: 1   LPICDGTGPERRLLLRSSFTRLAAPEISGGITPEILFPCKNNSDKTR 48
           LPI  G GPERRLLL S  T+L A EI  G TPEIL  C NNSDK R
Sbjct: 101 LPIWGGIGPERRLLLMSILTKLVALEIPTGSTPEILLLCMNNSDKFR 147

[Close]
BLAST of CaUC08G151480 vs. NCBI nr
Match: ACR35747.1 (unknown [Zea mays] >ACR35902.1 unknown [Zea mays])

HSP 1 Score: 60.1 bits (144), Expect = 6.5e-05
Identity = 55/207 (26.57%), Postives = 81/207 (39.13%), Query Frame = 0 

Query: 1   LPICDGTGPERRLLLRSSFTRLAAPEISGGITPEILF--------------PCKNNSD-- 60
           +PIC G+ P +RL   SS  +  A  + G   P+ +F              PC    D  
Sbjct: 122 VPICAGSAPVKRLSEMSSCDKFFAMAMVGSTVPDSMFPASSKRYRCGRDHRPCGTGPDSR 181

Query: 61  --------------------------KTRKYSNFPPLHMSNGNGPDRRFSDKSRTTIGEN 120
                                       R  S+FP LH + G  P+ R SDKSR + G+ 
Sbjct: 182 LFGSRTRVSVRHCPSSAGMGPISSLLSIRSCSSFPALHRAAGIRPEIRLSDKSRNSSGQF 241

Query: 121 FPNFCGICPEVYKWILEALLSKGSLTCP-----CPQALLNFQAPLSSSCCKFFSKEISLG 161
           FPN  G  P   +  + +L S  +  CP      P +   ++  LSS      ++  S G
Sbjct: 242 FPNSGGSSPT--RRFVNSLRSANAGACPNVAGMRPDSSFWYRCRLSS----LGARNTSAG 301

[Close]
BLAST of CaUC08G151480 vs. ExPASy TrEMBL
Match: A0A2P2NZJ5 (Uncharacterized protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 9.1e-13
Identity = 49/87 (56.32%), Postives = 59/87 (67.82%), Query Frame = 0 

Query: 163 MQVVNTIDFSFVRLEIFSGNFH--------KLSTSRLSRSKTDMGKSPVKKLYERSSTRS 222
           M VV  + FSF  LEIFSG+FH        KLSTSRL R  TD+G  PVK+LY+ SS R 
Sbjct: 1   MHVVRIMVFSFFGLEIFSGSFHKSSSTFSLKLSTSRLVRLVTDIGNLPVKRLYDMSSIRR 60

Query: 223 CFICDKSGIVPLRYKELMLSSSMREQL 242
            F  +KSG VP+RY++L+ SSS REQL
Sbjct: 61  DFSVEKSGSVPVRYRKLIFSSSKREQL 87

[Close]
BLAST of CaUC08G151480 vs. ExPASy TrEMBL
Match: A0A5A7Q4V2 (Cytochrome c550 OS=Striga asiatica OX=4170 GN=STAS_16892 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 5.7e-07
Identity = 46/141 (32.62%), Postives = 55/141 (39.01%), Query Frame = 0 

Query: 1   LPICDGTGPERRLLLRSSFTRLAAPEISGGITPEILFPCKNNSDK--------------- 60
           LPI  G GP++R  LRS  TRL A  ISGGI PEI FPC  +SDK               
Sbjct: 119 LPISQGIGPDKRFALRSILTRLVAQAISGGILPEIRFPCMKSSDKFFAARISSGIGPVNL 178

Query: 61  ---------------------------------------TRKYSNFPPLHMSNGNGPDRR 88
                                                   R+  +FP L   +G+GPD  
Sbjct: 179 ANIPGGILPSKLLLLTRNRMSDSHSAYEAGISPEREFWRIRRNLSFPMLQSPSGSGPDSW 238

[Close]
BLAST of CaUC08G151480 vs. ExPASy TrEMBL
Match: A0A2P5C645 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_296220 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.8e-05
Identity = 31/47 (65.96%), Postives = 32/47 (68.09%), Query Frame = 0 

Query: 1   LPICDGTGPERRLLLRSSFTRLAAPEISGGITPEILFPCKNNSDKTR 48
           LPI  G GPERRLLL S  T+L A EI  G TPEIL  C NNSDK R
Sbjct: 101 LPIWGGIGPERRLLLMSILTKLVALEIPTGSTPEILLLCMNNSDKFR 147

[Close]
BLAST of CaUC08G151480 vs. ExPASy TrEMBL
Match: C4J3J7 (Uncharacterized protein OS=Zea mays OX=4577 PE=2 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 3.1e-05
Identity = 55/207 (26.57%), Postives = 81/207 (39.13%), Query Frame = 0 

Query: 1   LPICDGTGPERRLLLRSSFTRLAAPEISGGITPEILF--------------PCKNNSD-- 60
           +PIC G+ P +RL   SS  +  A  + G   P+ +F              PC    D  
Sbjct: 122 VPICAGSAPVKRLSEMSSCDKFFAMAMVGSTVPDSMFPASSKRYRCGRDHRPCGTGPDSR 181

Query: 61  --------------------------KTRKYSNFPPLHMSNGNGPDRRFSDKSRTTIGEN 120
                                       R  S+FP LH + G  P+ R SDKSR + G+ 
Sbjct: 182 LFGSRTRVSVRHCPSSAGMGPISSLLSIRSCSSFPALHRAAGIRPEIRLSDKSRNSSGQF 241

Query: 121 FPNFCGICPEVYKWILEALLSKGSLTCP-----CPQALLNFQAPLSSSCCKFFSKEISLG 161
           FPN  G  P   +  + +L S  +  CP      P +   ++  LSS      ++  S G
Sbjct: 242 FPNSGGSSPT--RRFVNSLRSANAGACPNVAGMRPDSSFWYRCRLSS----LGARNTSAG 301

The following BLAST results are available for this feature:
BLAST of CaUC08G151480 vs. NCBI nr
Match NameE-valueIdentityDescription
GER40230.11.2e-0632.62cytochrome c550 [Striga asiatica][more]
CAB3480813.12.0e-0632.93unnamed protein product [Digitaria exilis] >CAB3502634.1 unnamed protein product... [more]
PON56471.13.8e-0565.96hypothetical protein TorRG33x02_296220 [Trema orientale][more]
ACR35747.16.5e-0526.57unknown [Zea mays] >ACR35902.1 unknown [Zea mays][more]
BLAST of CaUC08G151480 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CaUC08G151480 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A2P2NZJ59.1e-1356.32Uncharacterized protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1[more]
A0A5A7Q4V25.7e-0732.62Cytochrome c550 OS=Striga asiatica OX=4170 GN=STAS_16892 PE=4 SV=1[more]
A0A2P5C6451.8e-0565.96Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_296220 PE=4 SV... [more]
C4J3J73.1e-0526.57Uncharacterized protein OS=Zea mays OX=4577 PE=2 SV=1[more]
BLAST of CaUC08G151480 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC08G151480.1CaUC08G151480.1mRNA