CaUC08G150990 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC08G150990
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Cytochrome b6
Location	Ciama_Chr08: 22539033 .. 22540191 (+)
RNA-Seq Expression	CaUC08G150990
Synteny	CaUC08G150990

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGGTTTTAAATTAGAATTTACTATACTTAATTATAACTTATAAATAGTTATATACACCACTTTTATATTGTTGGTGTCCCAAACATAAAATAGGCTATAATAAGCCACTTCACAAACTTCTAGTTGGTGCCCCAAATGGTCCTTTAAGTTTTATAACGAAAGTATTCAACAAGAGGGTACCTCACGCTGTGAAGGGGATTTTTCTTTTTCTTTTTCATTTTCTTTATGAGGAACCAAAGTTAGATTTGATAGAAATTAAGGTTTACATATTGCAATTTAGATAGTCTTTATTCAAATTACAAATAAGTTATGGTTCTACCTCTCATATATGGTTCTCAAGGGGGGTCCCCTTGGTTTACGTATCTTAATAAAGTGTATGATTGGTTCGAAGAACGTCTTGAAATTCAGGCGATTACAAATGATATAACTAGCAAATACGTTCCTCCTCATGGCAACATATTTTTATTGTCTAGGAGGAATTACACTTGTTTTTTAGTACAAGTAGCTACGAGGTTTGCTATGACTTTTTACTACCGTCAAACCGTTACTGAGGCTTTTGCTTCTGTTCAATATATAATGACGGAAGCTAACTTTGGTTGGTTAATCCGATCAATTCATAGATGGTCGCCAAGTATGATGGTCTTAACGATGATCCTGCACGTATTTCCCATGTATCTTACTAGTGGATTTAAAAATCCTCGTGAATTGACTTGGGTTATAGGTGTGGTTCTAGCTGTATTGACCGCATCTTTTGGTGTAACTAGTTATTCCTTACCTTGGGACCAAATTGGTTATTGGGCAGTCAAAATTGTAACAGGTATACTGGGAACTATTTTAGTAATAGGGTCACCTTTGGTAGAGTTATTACACGGAAGTACTAGTGTGGGACAATCTACTTGACTCATTTTTATAGTTTACACACTTTTGTTTTACCTCTTCTTACTACCAACTTTATGTTAATGCAATTCCCAAAGATACGTAAGCAAGACGTTTTTGGTCTTTTATAGAGAATAGCAATCATAGATTTGTAATTAGTTATTTACGATTATTCAGAGGAGGAAGAAGAGTATTTCATTGCTGTAAAAATGGATTATTGCTGCCCTAGCCCAACACACCATCTTCCTCTTTTCTTCACCAACAATCTAAGTAATTAG

mRNA sequence

ATGGAGGCTACGAGGTTTGCTATGACTTTTTACTACCGTCAAACCGTTACTGAGGCTTTTGCTTCTGTTCAATATATAATGACGGAAGCTAACTTTGGTTGGTTAATCCGATCAATTCATAGATGGTCGCCAAGTATGATGGTCTTAACGATGATCCTGCACGTATTTCCCATGTATCTTACTAGTGGATTTAAAAATCCTCGTGAATTGACTTGGGTTATAGGTGTGGTTCTAGCTGTATTGACCGCATCTTTTGGTGTAACTAGTTATTCCTTACCTTGGGACCAAATTGGTTATTGGGCAGTCAAAATTGTAACAGAGGAGGAAGAAGAGTATTTCATTGCTGTAAAAATGGATTATTGCTGCCCTAGCCCAACACACCATCTTCCTCTTTTCTTCACCAACAATCTAAGTAATTAG

Coding sequence (CDS)

ATGGAGGCTACGAGGTTTGCTATGACTTTTTACTACCGTCAAACCGTTACTGAGGCTTTTGCTTCTGTTCAATATATAATGACGGAAGCTAACTTTGGTTGGTTAATCCGATCAATTCATAGATGGTCGCCAAGTATGATGGTCTTAACGATGATCCTGCACGTATTTCCCATGTATCTTACTAGTGGATTTAAAAATCCTCGTGAATTGACTTGGGTTATAGGTGTGGTTCTAGCTGTATTGACCGCATCTTTTGGTGTAACTAGTTATTCCTTACCTTGGGACCAAATTGGTTATTGGGCAGTCAAAATTGTAACAGAGGAGGAAGAAGAGTATTTCATTGCTGTAAAAATGGATTATTGCTGCCCTAGCCCAACACACCATCTTCCTCTTTTCTTCACCAACAATCTAAGTAATTAG

Protein sequence

MEATRFAMTFYYRQTVTEAFASVQYIMTEANFGWLIRSIHRWSPSMMVLTMILHVFPMYLTSGFKNPRELTWVIGVVLAVLTASFGVTSYSLPWDQIGYWAVKIVTEEEEEYFIAVKMDYCCPSPTHHLPLFFTNNLSN

Homology

[Close]

BLAST of CaUC08G150990 vs. NCBI nr
Match: ALI90276.1 (PetB, partial [Stachyanthus zenkeri])

HSP 1 Score: 193.4 bits (490), Expect = 1.3e-45
Identity = 94/104 (90.38%), Postives = 96/104 (92.31%), Query Frame = 0


Query: 3   ATRFAMTFYYRQTVTEAFASVQYIMTEANFGWLIRSIHRWSPSMMVLTMILHVFPMYLTS 62
           AT FAMTFYYR TVTEAFASVQYIMTEANFGWLIRS+HRWS SMMVLTMILHVF +YLT 
Sbjct: 47  ATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLTMILHVFRVYLTG 106

Query: 63  GFKNPRELTWVIGVVLAVLTASFGVTSYSLPWDQIGYWAVKIVT 107
           GFK PRELTWV GVVLAVLTASFGVT YSLPWDQIGYWAVKIVT
Sbjct: 107 GFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVT 150

[Close]

BLAST of CaUC08G150990 vs. NCBI nr
Match: YP_010007036.1 (PetB [Passiflora haematostigma] >YP_010007497.1 PetB [Passiflora rhamnifolia] >QNR05803.1 PetB [Passiflora haematostigma] >QNR06340.1 PetB [Passiflora rhamnifolia])

HSP 1 Score: 193.4 bits (490), Expect = 1.3e-45
Identity = 94/104 (90.38%), Postives = 96/104 (92.31%), Query Frame = 0


Query: 3   ATRFAMTFYYRQTVTEAFASVQYIMTEANFGWLIRSIHRWSPSMMVLTMILHVFPMYLTS 62
           AT FAMTFYYR TVTEAFASVQYIMTEANFGWLIRS+HRWS SMMVLTMILHVF +YLT 
Sbjct: 51  ATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLTMILHVFRVYLTG 110

Query: 63  GFKNPRELTWVIGVVLAVLTASFGVTSYSLPWDQIGYWAVKIVT 107
           GFK PRELTWV GVVLAVLTASFGVT YSLPWDQIGYWAVKIVT
Sbjct: 111 GFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVT 154

[Close]

BLAST of CaUC08G150990 vs. NCBI nr
Match: YP_010027411.1 (cytochrome b6 [Rhoiptelea chiliantha] >QOS47500.1 cytochrome b6 [Rhoiptelea chiliantha])

HSP 1 Score: 193.4 bits (490), Expect = 1.3e-45
Identity = 94/104 (90.38%), Postives = 96/104 (92.31%), Query Frame = 0


Query: 3   ATRFAMTFYYRQTVTEAFASVQYIMTEANFGWLIRSIHRWSPSMMVLTMILHVFPMYLTS 62
           AT FAMTFYYR TVTEAFASVQYIMTEANFGWLIRS+HRWS SMMVL MILHVF +YLT 
Sbjct: 49  ATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTG 108

Query: 63  GFKNPRELTWVIGVVLAVLTASFGVTSYSLPWDQIGYWAVKIVT 107
           GFKNPRELTWV GVVLAVLTASFGVT YSLPWDQIGYWAVKIVT
Sbjct: 109 GFKNPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVT 152

[Close]

BLAST of CaUC08G150990 vs. NCBI nr
Match: YP_009501429.1 (cytochrome b6 [Passiflora pittieri] >AXB37996.1 cytochrome b6 [Passiflora pittieri])

HSP 1 Score: 193.4 bits (490), Expect = 1.3e-45
Identity = 94/104 (90.38%), Postives = 96/104 (92.31%), Query Frame = 0


Query: 3   ATRFAMTFYYRQTVTEAFASVQYIMTEANFGWLIRSIHRWSPSMMVLTMILHVFPMYLTS 62
           AT FAMTFYYR TVTEAFASVQYIMTEANFGWLIRS+HRWS SMMVLTMILHVF +YLT 
Sbjct: 49  ATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLTMILHVFRVYLTG 108

Query: 63  GFKNPRELTWVIGVVLAVLTASFGVTSYSLPWDQIGYWAVKIVT 107
           GFK PRELTWV GVVLAVLTASFGVT YSLPWDQIGYWAVKIVT
Sbjct: 109 GFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVT 152

[Close]

BLAST of CaUC08G150990 vs. NCBI nr
Match: QWY86222.1 (cytochrome b6 [Guibourtia coleosperma])

HSP 1 Score: 193.0 bits (489), Expect = 1.8e-45
Identity = 93/104 (89.42%), Postives = 96/104 (92.31%), Query Frame = 0


Query: 3   ATRFAMTFYYRQTVTEAFASVQYIMTEANFGWLIRSIHRWSPSMMVLTMILHVFPMYLTS 62
           AT FAMTFYYR TVTEAFASVQYIMTEANFGWLIRS+HRWS SMMVLTMILHVF +YLT 
Sbjct: 49  ATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLTMILHVFRVYLTG 108

Query: 63  GFKNPRELTWVIGVVLAVLTASFGVTSYSLPWDQIGYWAVKIVT 107
           GFK PRELTW+ GVVLAVLTASFGVT YSLPWDQIGYWAVKIVT
Sbjct: 109 GFKKPRELTWITGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVT 152

[Close]

BLAST of CaUC08G150990 vs. ExPASy Swiss-Prot
Match: Q8S8W0 (Cytochrome b6 OS=Atropa belladonna OX=33113 GN=petB PE=3 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 8.8e-48
Identity = 93/104 (89.42%), Postives = 95/104 (91.35%), Query Frame = 0


Query: 3   ATRFAMTFYYRQTVTEAFASVQYIMTEANFGWLIRSIHRWSPSMMVLTMILHVFPMYLTS 62
           AT FAMTFYYR TVTEAFASVQYIMTEANFGWLIRS+HRWS SMMVL MILHVF +YLT 
Sbjct: 49  ATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTG 108

Query: 63  GFKNPRELTWVIGVVLAVLTASFGVTSYSLPWDQIGYWAVKIVT 107
           GFK PRELTWV GVVLAVLTASFGVT YSLPWDQIGYWAVKIVT
Sbjct: 109 GFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVT 152

[Close]

BLAST of CaUC08G150990 vs. ExPASy Swiss-Prot
Match: Q7YJU8 (Cytochrome b6 OS=Calycanthus floridus var. glaucus OX=212734 GN=petB PE=3 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 8.8e-48
Identity = 93/104 (89.42%), Postives = 95/104 (91.35%), Query Frame = 0


Query: 3   ATRFAMTFYYRQTVTEAFASVQYIMTEANFGWLIRSIHRWSPSMMVLTMILHVFPMYLTS 62
           AT FAMTFYYR TVTEAFASVQYIMTEANFGWLIRS+HRWS SMMVL MILHVF +YLT 
Sbjct: 49  ATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTG 108

Query: 63  GFKNPRELTWVIGVVLAVLTASFGVTSYSLPWDQIGYWAVKIVT 107
           GFK PRELTWV GVVLAVLTASFGVT YSLPWDQIGYWAVKIVT
Sbjct: 109 GFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVT 152

[Close]

BLAST of CaUC08G150990 vs. ExPASy Swiss-Prot
Match: Q49KW8 (Cytochrome b6 OS=Eucalyptus globulus subsp. globulus OX=71271 GN=petB PE=3 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 8.8e-48
Identity = 93/104 (89.42%), Postives = 95/104 (91.35%), Query Frame = 0


Query: 3   ATRFAMTFYYRQTVTEAFASVQYIMTEANFGWLIRSIHRWSPSMMVLTMILHVFPMYLTS 62
           AT FAMTFYYR TVTEAFASVQYIMTEANFGWLIRS+HRWS SMMVL MILHVF +YLT 
Sbjct: 49  ATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTG 108

Query: 63  GFKNPRELTWVIGVVLAVLTASFGVTSYSLPWDQIGYWAVKIVT 107
           GFK PRELTWV GVVLAVLTASFGVT YSLPWDQIGYWAVKIVT
Sbjct: 109 GFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVT 152

[Close]

BLAST of CaUC08G150990 vs. ExPASy Swiss-Prot
Match: Q6EW22 (Cytochrome b6 OS=Nymphaea alba OX=34301 GN=petB PE=3 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 8.8e-48
Identity = 93/104 (89.42%), Postives = 95/104 (91.35%), Query Frame = 0


Query: 3   ATRFAMTFYYRQTVTEAFASVQYIMTEANFGWLIRSIHRWSPSMMVLTMILHVFPMYLTS 62
           AT FAMTFYYR TVTEAFASVQYIMTEANFGWLIRS+HRWS SMMVL MILHVF +YLT 
Sbjct: 49  ATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTG 108

Query: 63  GFKNPRELTWVIGVVLAVLTASFGVTSYSLPWDQIGYWAVKIVT 107
           GFK PRELTWV GVVLAVLTASFGVT YSLPWDQIGYWAVKIVT
Sbjct: 109 GFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVT 152

[Close]

BLAST of CaUC08G150990 vs. ExPASy Swiss-Prot
Match: Q9MTJ5 (Cytochrome b6 OS=Oenothera elata subsp. hookeri OX=85636 GN=petB PE=3 SV=2)

HSP 1 Score: 191.0 bits (484), Expect = 8.8e-48
Identity = 93/104 (89.42%), Postives = 95/104 (91.35%), Query Frame = 0


Query: 3   ATRFAMTFYYRQTVTEAFASVQYIMTEANFGWLIRSIHRWSPSMMVLTMILHVFPMYLTS 62
           AT FAMTFYYR TVTEAFASVQYIMTEANFGWLIRS+HRWS SMMVL MILHVF +YLT 
Sbjct: 49  ATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTG 108

Query: 63  GFKNPRELTWVIGVVLAVLTASFGVTSYSLPWDQIGYWAVKIVT 107
           GFK PRELTWV GVVLAVLTASFGVT YSLPWDQIGYWAVKIVT
Sbjct: 109 GFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVT 152

[Close]

BLAST of CaUC08G150990 vs. ExPASy TrEMBL
Match: A0A2Z5D6F8 (Cytochrome b6 OS=Passiflora pittieri OX=196689 GN=petB PE=3 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 6.5e-46
Identity = 94/104 (90.38%), Postives = 96/104 (92.31%), Query Frame = 0


Query: 3   ATRFAMTFYYRQTVTEAFASVQYIMTEANFGWLIRSIHRWSPSMMVLTMILHVFPMYLTS 62
           AT FAMTFYYR TVTEAFASVQYIMTEANFGWLIRS+HRWS SMMVLTMILHVF +YLT 
Sbjct: 49  ATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLTMILHVFRVYLTG 108

Query: 63  GFKNPRELTWVIGVVLAVLTASFGVTSYSLPWDQIGYWAVKIVT 107
           GFK PRELTWV GVVLAVLTASFGVT YSLPWDQIGYWAVKIVT
Sbjct: 109 GFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVT 152

[Close]

BLAST of CaUC08G150990 vs. ExPASy TrEMBL
Match: A0A0S0ZIL6 (Cytochrome b6 (Fragment) OS=Stachyanthus zenkeri OX=159392 GN=petB PE=3 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 6.5e-46
Identity = 94/104 (90.38%), Postives = 96/104 (92.31%), Query Frame = 0


Query: 3   ATRFAMTFYYRQTVTEAFASVQYIMTEANFGWLIRSIHRWSPSMMVLTMILHVFPMYLTS 62
           AT FAMTFYYR TVTEAFASVQYIMTEANFGWLIRS+HRWS SMMVLTMILHVF +YLT 
Sbjct: 47  ATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLTMILHVFRVYLTG 106

Query: 63  GFKNPRELTWVIGVVLAVLTASFGVTSYSLPWDQIGYWAVKIVT 107
           GFK PRELTWV GVVLAVLTASFGVT YSLPWDQIGYWAVKIVT
Sbjct: 107 GFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVT 150

[Close]

BLAST of CaUC08G150990 vs. ExPASy TrEMBL
Match: A0A7H0TZ88 (Cytochrome b6 OS=Passiflora rhamnifolia OX=343974 GN=petB PE=3 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 6.5e-46
Identity = 94/104 (90.38%), Postives = 96/104 (92.31%), Query Frame = 0


Query: 3   ATRFAMTFYYRQTVTEAFASVQYIMTEANFGWLIRSIHRWSPSMMVLTMILHVFPMYLTS 62
           AT FAMTFYYR TVTEAFASVQYIMTEANFGWLIRS+HRWS SMMVLTMILHVF +YLT 
Sbjct: 51  ATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLTMILHVFRVYLTG 110

Query: 63  GFKNPRELTWVIGVVLAVLTASFGVTSYSLPWDQIGYWAVKIVT 107
           GFK PRELTWV GVVLAVLTASFGVT YSLPWDQIGYWAVKIVT
Sbjct: 111 GFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVT 154

[Close]

BLAST of CaUC08G150990 vs. ExPASy TrEMBL
Match: A0A7H0TXQ1 (Cytochrome b6 OS=Passiflora haematostigma OX=159429 GN=petB PE=3 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 6.5e-46
Identity = 94/104 (90.38%), Postives = 96/104 (92.31%), Query Frame = 0


Query: 3   ATRFAMTFYYRQTVTEAFASVQYIMTEANFGWLIRSIHRWSPSMMVLTMILHVFPMYLTS 62
           AT FAMTFYYR TVTEAFASVQYIMTEANFGWLIRS+HRWS SMMVLTMILHVF +YLT 
Sbjct: 51  ATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLTMILHVFRVYLTG 110

Query: 63  GFKNPRELTWVIGVVLAVLTASFGVTSYSLPWDQIGYWAVKIVT 107
           GFK PRELTWV GVVLAVLTASFGVT YSLPWDQIGYWAVKIVT
Sbjct: 111 GFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVT 154

[Close]

BLAST of CaUC08G150990 vs. ExPASy TrEMBL
Match: A0A7M1Y6K7 (Cytochrome b6 OS=Rhoiptelea chiliantha OX=60426 GN=petB PE=3 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 6.5e-46
Identity = 94/104 (90.38%), Postives = 96/104 (92.31%), Query Frame = 0


Query: 3   ATRFAMTFYYRQTVTEAFASVQYIMTEANFGWLIRSIHRWSPSMMVLTMILHVFPMYLTS 62
           AT FAMTFYYR TVTEAFASVQYIMTEANFGWLIRS+HRWS SMMVL MILHVF +YLT 
Sbjct: 49  ATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTG 108

Query: 63  GFKNPRELTWVIGVVLAVLTASFGVTSYSLPWDQIGYWAVKIVT 107
           GFKNPRELTWV GVVLAVLTASFGVT YSLPWDQIGYWAVKIVT
Sbjct: 109 GFKNPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVT 152

[Close]

BLAST of CaUC08G150990 vs. TAIR 10
Match: ATCG00720.1 (photosynthetic electron transfer B )

HSP 1 Score: 189.5 bits (480), Expect = 1.8e-48
Identity = 92/104 (88.46%), Postives = 94/104 (90.38%), Query Frame = 0


Query: 3   ATRFAMTFYYRQTVTEAFASVQYIMTEANFGWLIRSIHRWSPSMMVLTMILHVFPMYLTS 62
           AT FAMTFYYR TVTEAFASVQYIMTEANFGWLIRS+HRWS SMMVL MILHVF +YLT 
Sbjct: 49  ATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTG 108

Query: 63  GFKNPRELTWVIGVVLAVLTASFGVTSYSLPWDQIGYWAVKIVT 107
           GFK PRELTWV GVVL VLTASFGVT YSLPWDQIGYWAVKIVT
Sbjct: 109 GFKKPRELTWVTGVVLGVLTASFGVTGYSLPWDQIGYWAVKIVT 152

[Close]

BLAST of CaUC08G150990 vs. TAIR 10
Match: AT2G07727.1 (Di-haem cytochrome, transmembrane;Cytochrome b/b6, C-terminal )

HSP 1 Score: 75.9 bits (185), Expect = 2.9e-14
Identity = 33/99 (33.33%), Postives = 54/99 (54.55%), Query Frame = 0


Query: 8   MTFYYRQTVTEAFASVQYIMTEANFGWLIRSIHRWSPSMMVLTMILHVFPMYLTSGFKNP 67
           +  +Y   V  AF SV++IM +   GWL+R +H    SM ++ + LH+F     + + +P
Sbjct: 56  LAMHYTPHVDLAFNSVEHIMRDVEGGWLLRYMHANGASMFLIVVYLHIFRGLYHASYSSP 115

Query: 68  RELTWVIGVVLAVLTASFGVTSYSLPWDQIGYWAVKIVT 107
           RE  W +GVV+ +L        Y LPW Q+ +W   ++T
Sbjct: 116 REFVWCLGVVIFLLMIVTAFIGYVLPWGQMSFWGATVIT 154

[Close]

BLAST of CaUC08G150990 vs. TAIR 10
Match: ATMG00220.1 (apocytochrome b )

HSP 1 Score: 75.9 bits (185), Expect = 2.9e-14
Identity = 33/99 (33.33%), Postives = 54/99 (54.55%), Query Frame = 0


Query: 8   MTFYYRQTVTEAFASVQYIMTEANFGWLIRSIHRWSPSMMVLTMILHVFPMYLTSGFKNP 67
           +  +Y   V  AF SV++IM +   GWL+R +H    SM ++ + LH+F     + + +P
Sbjct: 56  LAMHYTPHVDLAFNSVEHIMRDVEGGWLLRYMHANGASMFLIVVYLHIFRGLYHASYSSP 115

Query: 68  RELTWVIGVVLAVLTASFGVTSYSLPWDQIGYWAVKIVT 107
           RE  W +GVV+ +L        Y LPW Q+ +W   ++T
Sbjct: 116 REFVWCLGVVIFLLMIVTAFIGYVLPWGQMSFWGATVIT 154

The following BLAST results are available for this feature:

BLAST of CaUC08G150990 vs. NCBI nr


Match Name	E-value	Identity	Description
ALI90276.1	1.3e-45	90.38	PetB, partial [Stachyanthus zenkeri]	[more]
YP_010007036.1	1.3e-45	90.38	PetB [Passiflora haematostigma] >YP_010007497.1 PetB [Passiflora rhamnifolia] >Q...	[more]
YP_010027411.1	1.3e-45	90.38	cytochrome b6 [Rhoiptelea chiliantha] >QOS47500.1 cytochrome b6 [Rhoiptelea chil...	[more]
YP_009501429.1	1.3e-45	90.38	cytochrome b6 [Passiflora pittieri] >AXB37996.1 cytochrome b6 [Passiflora pittie...	[more]
QWY86222.1	1.8e-45	89.42	cytochrome b6 [Guibourtia coleosperma]	[more]

BLAST of CaUC08G150990 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8S8W0	8.8e-48	89.42	Cytochrome b6 OS=Atropa belladonna OX=33113 GN=petB PE=3 SV=1	[more]
Q7YJU8	8.8e-48	89.42	Cytochrome b6 OS=Calycanthus floridus var. glaucus OX=212734 GN=petB PE=3 SV=1	[more]
Q49KW8	8.8e-48	89.42	Cytochrome b6 OS=Eucalyptus globulus subsp. globulus OX=71271 GN=petB PE=3 SV=1	[more]
Q6EW22	8.8e-48	89.42	Cytochrome b6 OS=Nymphaea alba OX=34301 GN=petB PE=3 SV=1	[more]
Q9MTJ5	8.8e-48	89.42	Cytochrome b6 OS=Oenothera elata subsp. hookeri OX=85636 GN=petB PE=3 SV=2	[more]

BLAST of CaUC08G150990 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2Z5D6F8	6.5e-46	90.38	Cytochrome b6 OS=Passiflora pittieri OX=196689 GN=petB PE=3 SV=1	[more]
A0A0S0ZIL6	6.5e-46	90.38	Cytochrome b6 (Fragment) OS=Stachyanthus zenkeri OX=159392 GN=petB PE=3 SV=1	[more]
A0A7H0TZ88	6.5e-46	90.38	Cytochrome b6 OS=Passiflora rhamnifolia OX=343974 GN=petB PE=3 SV=1	[more]
A0A7H0TXQ1	6.5e-46	90.38	Cytochrome b6 OS=Passiflora haematostigma OX=159429 GN=petB PE=3 SV=1	[more]
A0A7M1Y6K7	6.5e-46	90.38	Cytochrome b6 OS=Rhoiptelea chiliantha OX=60426 GN=petB PE=3 SV=1	[more]

BLAST of CaUC08G150990 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00720.1	1.8e-48	88.46	photosynthetic electron transfer B	[more]
AT2G07727.1	2.9e-14	33.33	Di-haem cytochrome, transmembrane;Cytochrome b/b6, C-terminal	[more]
ATMG00220.1	2.9e-14	33.33	apocytochrome b	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005797	Cytochrome b/b6, N-terminal	PFAM	PF00033	Cytochrome_B	coord: 4..107 e-value: 2.2E-42 score: 145.0
IPR005797	Cytochrome b/b6, N-terminal	PROSITE	PS51002	CYTB_NTER	coord: 1..139 score: 19.411512
IPR027387	Cytochrome b/b6-like domain superfamily	GENE3D	1.20.810.10	Cytochrome Bc1 Complex; Chain C	coord: 3..114 e-value: 2.8E-42 score: 146.5
IPR023530	Cytochrome b6, PetB	PANTHER	PTHR19271:SF20	SUBFAMILY NOT NAMED	coord: 3..109
None	No IPR available	PANTHER	PTHR19271	CYTOCHROME B	coord: 3..109
IPR016174	Di-haem cytochrome, transmembrane	SUPERFAMILY	81342	Transmembrane di-heme cytochromes	coord: 6..107

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC08G150990.1	CaUC08G150990.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015979	photosynthesis
biological_process	GO:0022904	respiratory electron transport chain
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0045158	electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0009055	electron transfer activity
molecular_function	GO:0016491	oxidoreductase activity