CaUC08G150520 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC08G150520
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
LocationCiama_Chr08: 22094784 .. 22095229 (-)
RNA-Seq ExpressionCaUC08G150520
SyntenyCaUC08G150520
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGTTTGTAAAAATCAGCATCATAATCCATTACCATCAAGCTTTTCTTCTTCGCGACCACCACCTCTTTCTCTTCCTCCATTAACAATTTCAAGCTGATTTTCGATTGCTTTTCTGCTTCTTCTTCTTCTTCTTCTTTTTCTTGTTTTGGTTTCCGTAACAGAGAATTTGGGGCTGACCTGCAACGCATCAGTAACAGAGCATTCGGAGGCGGAACCGAAACAGAGGAAGGCTGGAACTCGAGTGAAGAAACGACGTCGTTGTTTTTGGGTTTGGTTTCTTCTTCCTGTAGAACCATGAACCATTCCGAGAACATTGTTCTTCCTCTTCTCGAAGAATCTTCAATGGGTTCTTGTTCGGATTCGGATTCGGATTCGGGTTCGGCTTCTTCTTCTCCTTCTTCTTCTTCTTCTTCTTCATCCTCTGTTGTAATGTCGGATTGA

mRNA sequence

ATGAAACTGATTTTCGATTGCTTTTCTGCTTCTTCTTCTTCTTCTTCTTTTTCTTGTTTTGGTTTCCGTAACAGAGAATTTGGGGCTGACCTGCAACGCATCAGTAACAGAGCATTCGGAGGCGGAACCGAAACAGAGGAAGGCTGGAACTCGAGTGAAGAAACGACGTCGTTGTTTTTGGGTTTGGTTTCTTCTTCCTGTAGAACCATGAACCATTCCGAGAACATTGTTCTTCCTCTTCTCGAAGAATCTTCAATGGGTTCTTGTTCGGATTCGGATTCGGATTCGGGTTCGGCTTCTTCTTCTCCTTCTTCTTCTTCTTCTTCTTCATCCTCTGTTGTAATGTCGGATTGA

Coding sequence (CDS)

ATGAAACTGATTTTCGATTGCTTTTCTGCTTCTTCTTCTTCTTCTTCTTTTTCTTGTTTTGGTTTCCGTAACAGAGAATTTGGGGCTGACCTGCAACGCATCAGTAACAGAGCATTCGGAGGCGGAACCGAAACAGAGGAAGGCTGGAACTCGAGTGAAGAAACGACGTCGTTGTTTTTGGGTTTGGTTTCTTCTTCCTGTAGAACCATGAACCATTCCGAGAACATTGTTCTTCCTCTTCTCGAAGAATCTTCAATGGGTTCTTGTTCGGATTCGGATTCGGATTCGGGTTCGGCTTCTTCTTCTCCTTCTTCTTCTTCTTCTTCTTCATCCTCTGTTGTAATGTCGGATTGA

Protein sequence

MKLIFDCFSASSSSSSFSCFGFRNREFGADLQRISNRAFGGGTETEEGWNSSEETTSLFLGLVSSSCRTMNHSENIVLPLLEESSMGSCSDSDSDSGSASSSPSSSSSSSSSVVMSD
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 85..117
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..19
score: 5.0

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC08G150520.1CaUC08G150520.1mRNA