CaUC08G150070 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TCGTATTAATACATTTGGCAACAAAGTAATGCATTCTGAAGCTTACTGCAGCGGCCTTTACAAATCGCCGGAGTTCCTATAATTTCCGGCCAGATGAGTTTTCCCGGCGAGAGAGGTTAACAAATTTCCCGCCGCAAAATACGAGGCTGTATTGAAATTTGTATTTGGTTCGTTAGCACTTGAAGAATTCCTGAAGAATTCAAAGTGACCTGAGAATTTGACAATTACAAAGCTTCTTTCAATTACGATACAAGTGACAGAGGATTGGAGAATCGGAGAGGAATAACGGACGCCTTTTCAATTGTTCTGGTCCGGTGATCGGTGACGTGGCATACGGCGGAGTTTCAAGGAGAATTGCCGGTGAAGAAGGAGGAGGAGAAGGAAGAGATATTTGATTTGGTAAGTAATTTGAAGTTAGGTTTAGGTTAATTGAAGGGAATATAATTGAATACTGTATCTGTGGAGTATTAATTAAGGAGGGGAGTCGGTAAGGCCATTTGTTTTTCTCTTCCTTTATTAATTGCAATGAGAGAGAGAGCGAGATAAAGAAAGAGAAAGAGGTTCTGTGTAATCTGCCATGGCAGATAAGCTTTTTTGAGGCTGATAACAGAAATAGCCAAGCTCTCTCTGACTCTGTTCCACCATTTATTCAAATTTCACTCTCTTTTCTCTCTGTTCCATAAATTCAATCACCAAACTAGGGCGCTCCTTTGGCCCATTTTTTACTCGTCCATTTTATAATATCAGGGGTTTTCTGCCTCAATTTTATTCACCTTCCCATTTCTGCTTCAGGGTTTTACATGGAGGTCGATATTTTTGTTCTTCATAATTTCTTCTTTAACTCTGTATTATATTGTTGTTTGAATATTTGACTTCCCTGTCTGTACATATTTCTTTTTCCCATTCTGTGATGTTTTGGATTCTTTCTGTTAGTTTACCTTTTTCCCCCATTCACAATGAGGTGGAGGATGGGGGTTGGGGTTGATTTCATTTCATCATTAGTTGAAGATAAAGGAGAATTGGTGGGGGAATTTTCTTTGTTTGAATAATCATTTTAAGTTATGATGTTTCTGTTGAAAGTTTTTGTTTGCTTTTGAAAAGTTCTTCCAACTTTTTTACCACTCGTCTTTTTCTCTTTTTATTTTTTAGGATTGGTAACAGGGCTTTGGATTCCCAGCACGTATAGCCCAGAGAATTTTTTAATTTATATTTTGAATCAAGTTATCATGTAATAATGACTTTGATATGCTCTTTACAGGATGTTTAGTTTAGTCTGAATATTTCTGATTTTCTTGATTTACTCAAGCGTTCTGTGTTGAGATTTAGTTAATTTTCATTGAGATGTCACTGCCTTTTATGGTAAATTGTTAACATTAATGAGCTGATTCTTTATGGTTCTTAAATGAGTGATTCTGGAGGGGCCGGACCTCGGCACCTGGTCAATCAGCTAGGAGCTGACAATGTTATTCTTTGTAACTGTTAGAATAGTTGGGGGCGTTTTCTTTTGGCTTTTGGCTTTTGCCAGTTTGAACTCAACCTTTTCTCTTTAGTATCATTAAAATAGATTTGCCTGTTCTGCTTCAGAATAATTGATATAATTACAATATCTGAGGAGAATATATAGGAGTTGCTAATGAGTTACAGTCACAGCTGATGATCCATTTCTTGGAATGACTTTTGTTCTTCACTCTGTTTTTAGCCTCAAACTGGCTATGAAGTTGTTGTGTTTGATCGCCTATATTATGGTGGACTGCAAAATTTTATATTGTTCTCTTCCTTTTAAGCTCAGCTTATTTTATTCTCTCTTCCATTCACAGAAGTTTACAAAGTTGTTGAATTTCCGTTTTAATAAATTGATGTTTTATGACAGGTTTGCTTAGGGGTAGCCCCTCTGTCGCGTGTTCATGCTATCTTTCATGAAGATTGATTCTTTTGAAGTTCCTTTGGCCTCCATGATTTTTGTTAACTATGAAACTGGGTAACAACATTTTCTATTGCCTTGTATTCTACTTGAAAGTTCTACGTTTTGTTCCTGATGTTATTTCCTGTTTGCTCTTTTATCCAATGATCTTCTGTTGTTTTGTAAAAGAAGAGACTATTTTGAACTTTATCATTTTGGTGCTATTTACACTCATCAATCTACTGCTTTTTCTCCAATTTGTTATCCTAACTTGCCTTTGTTATGATGTAAATGCAGAAAGTGACTCTTCATTTTACCATTCAATGACCAGCCCTAATTGTGCTCCAGAATCTCTTGAATGCAATTACAGCAGTACTGAGTTGCAACACCAGGTCACGAACAACAATCCAATTGGTCTTTCATGTCAAGAGAAGATAAACCAGGAAGATGCCATTCAATCTTCATATTCTTCTGGTGATGGGAATAGTTGCATTACTACTAAAATTAACCACTCGTCTGTCGATGTTTTTGATAATAATGCTAATTGTATCAGTGCATTTGAGGCACCATCCAATAGGAAACCCTCATTCTCATATGTTGACAAAAGTGTCATGGAATGTCAAATGTCAAAAACGATAGTTTGTGACAAAGAAATTAATGTCAATGATGTGAAGGATATCTGCATCGATGAAGGGGTGTCTTCTCTGGACAATTTTTTCTTTAAGAGTACAGATGAGAAGTCAATCAGTAAAATTTCGCCTCTGGAGGAAGACCAAAATGAAGGATCTATAAAAGAAAAAGAGAATTCTTCTGAGGTGTCCAAGTTCATTGCAGTTGATCATAAAGTTTCTTTAGAAGATCACTTTGCCATGGACTGGACTAATCATAATGATGCGAAGGACTTGACACAGATAGAGGAAGAAAAATTCAATCTGAGTGAACCAAAAGTTTTGATGCAAAAGCTAGATAAAAAAAGTTACTCTTCTGAGTCATTAGACAACATAGATGTTCAGGTATGCATATTTCTGGCCAAGTTATTAACCATGTCTTCTCGCACTTCATGTTTGTTCTATTTTTAGTCTGAATATATCAAAGGACGTCAAACGAAGCAATTTTAGCTTGAGTGGCTCAGAACTTTCATGTTTGATGCTTTTTGGCATTGGTTGATGTAGATTGGACTTCTTCTGATTGCAGATATCTAGTGAAAAAGAAAACTCGGAAGACCCTGCTTCGGCTTCCAAATCTGTTGAATCTTGTAATGTCACTCCTACTCTGGCTTCTGTGGCAGAACCACCAAATGATAGTAACATTCCAGCTCATCCTTCAGGTTATAATAATGAATTTGAGAACGGGAGTATTGCAATTAATTTCAATTCGATCTCTCCCATGGCCAATGGTGAAGAAGAACATCATGGAAATCCCAACTTAAACTCTCCAGCACCCATGACCAGCAATGAAGAAACAGAGGAGTGTCATGGAAGAAGCGATTCTGTAATTGGAACTCAAGGTTCAACCAATCTGGACTATAGAACTTCAGATAGTAGACTAGTTTCAAGTCAGAACCCACACAACATTGGCGAGTCTAGTTTCTCTGCTGTAGATCCACTTGCTAGTCTTGTTACTTACTCAGGGCCAATAGCTTATTCTGGAAGCATCTCGCTTCGGTCAGAAAGTAGCACAACAAGCACACGTTCTTTTGCCTTTCCTGTGTAAGTTGCAAATCTGACTTCACCTCACAAGCTTCTTCTTTATATATCCTTTTTCTAAATTTTAATCTAAGGTAAATCATATTTGTTCTCTGGGTTTACAGATTACAGTCTGAATGGAATAGTAGCCCGGTTAAAATGGTAAAGGCTGAACGGAGGCATTACCGGAAGTATCGAGGTTGGAGGGAGGGCCTTCTATGTTGCAAATTCTGA TCGTATTAATACATTTGGCAACAAAGTAATGCATTCTGAAGCTTACTGCAGCGGCCTTTACAAATCGCCGGAGTTCCTATAATTTCCGGCCAGATGAGTTTTCCCGGCGAGAGAGGTTAACAAATTTCCCGCCGCAAAATACGAGGCTGTATTGAAATTTGTATTTGGTTCGTTAGCACTTGAAGAATTCCTGAAGAATTCAAAGTGACCTGAGAATTTGACAATTACAAAGCTTCTTTCAATTACGATACAAGTGACAGAGGATTGGAGAATCGGAGAGGAATAACGGACGCCTTTTCAATTGTTCTGGTCCGGTGATCGGTGACGTGGCATACGGCGGAGTTTCAAGGAGAATTGCCGGTGAAGAAGGAGGAGGAGAAGGAAGAGATATTTGATTTGGTTTGCTTAGGGGTAGCCCCTCTGTCGCGTGTTCATGCTATCTTTCATGAAGATTGATTCTTTTGAAGTTCCTTTGGCCTCCATGATTTTTGTTAACTATGAAACTGGAAAGTGACTCTTCATTTTACCATTCAATGACCAGCCCTAATTGTGCTCCAGAATCTCTTGAATGCAATTACAGCAGTACTGAGTTGCAACACCAGGTCACGAACAACAATCCAATTGGTCTTTCATGTCAAGAGAAGATAAACCAGGAAGATGCCATTCAATCTTCATATTCTTCTGGTGATGGGAATAGTTGCATTACTACTAAAATTAACCACTCGTCTGTCGATGTTTTTGATAATAATGCTAATTGTATCAGTGCATTTGAGGCACCATCCAATAGGAAACCCTCATTCTCATATGTTGACAAAAGTGTCATGGAATGTCAAATGTCAAAAACGATAGTTTGTGACAAAGAAATTAATGTCAATGATGTGAAGGATATCTGCATCGATGAAGGGGTGTCTTCTCTGGACAATTTTTTCTTTAAGAGTACAGATGAGAAGTCAATCAGTAAAATTTCGCCTCTGGAGGAAGACCAAAATGAAGGATCTATAAAAGAAAAAGAGAATTCTTCTGAGGTGTCCAAGTTCATTGCAGTTGATCATAAAGTTTCTTTAGAAGATCACTTTGCCATGGACTGGACTAATCATAATGATGCGAAGGACTTGACACAGATAGAGGAAGAAAAATTCAATCTGAGTGAACCAAAAGTTTTGATGCAAAAGCTAGATAAAAAAAGTTACTCTTCTGAGTCATTAGACAACATAGATGTTCAGATATCTAGTGAAAAAGAAAACTCGGAAGACCCTGCTTCGGCTTCCAAATCTGTTGAATCTTGTAATGTCACTCCTACTCTGGCTTCTGTGGCAGAACCACCAAATGATAGTAACATTCCAGCTCATCCTTCAGGTTATAATAATGAATTTGAGAACGGGAGTATTGCAATTAATTTCAATTCGATCTCTCCCATGGCCAATGGTGAAGAAGAACATCATGGAAATCCCAACTTAAACTCTCCAGCACCCATGACCAGCAATGAAGAAACAGAGGAGTGTCATGGAAGAAGCGATTCTGTAATTGGAACTCAAGGTTCAACCAATCTGGACTATAGAACTTCAGATAGTAGACTAGTTTCAAGTCAGAACCCACACAACATTGGCGAGTCTAGTTTCTCTGCTGTAGATCCACTTGCTAGTCTTGTTACTTACTCAGGGCCAATAGCTTATTCTGGAAGCATCTCGCTTCGGTCAGAAAGTAGCACAACAAGCACACGTTCTTTTGCCTTTCCTGTATTACAGTCTGAATGGAATAGTAGCCCGGTTAAAATGGTAAAGGCTGAACGGAGGCATTACCGGAAGTATCGAGGTTGGAGGGAGGGCCTTCTATGTTGCAAATTCTGA ATGAAACTGGAAAGTGACTCTTCATTTTACCATTCAATGACCAGCCCTAATTGTGCTCCAGAATCTCTTGAATGCAATTACAGCAGTACTGAGTTGCAACACCAGGTCACGAACAACAATCCAATTGGTCTTTCATGTCAAGAGAAGATAAACCAGGAAGATGCCATTCAATCTTCATATTCTTCTGGTGATGGGAATAGTTGCATTACTACTAAAATTAACCACTCGTCTGTCGATGTTTTTGATAATAATGCTAATTGTATCAGTGCATTTGAGGCACCATCCAATAGGAAACCCTCATTCTCATATGTTGACAAAAGTGTCATGGAATGTCAAATGTCAAAAACGATAGTTTGTGACAAAGAAATTAATGTCAATGATGTGAAGGATATCTGCATCGATGAAGGGGTGTCTTCTCTGGACAATTTTTTCTTTAAGAGTACAGATGAGAAGTCAATCAGTAAAATTTCGCCTCTGGAGGAAGACCAAAATGAAGGATCTATAAAAGAAAAAGAGAATTCTTCTGAGGTGTCCAAGTTCATTGCAGTTGATCATAAAGTTTCTTTAGAAGATCACTTTGCCATGGACTGGACTAATCATAATGATGCGAAGGACTTGACACAGATAGAGGAAGAAAAATTCAATCTGAGTGAACCAAAAGTTTTGATGCAAAAGCTAGATAAAAAAAGTTACTCTTCTGAGTCATTAGACAACATAGATGTTCAGATATCTAGTGAAAAAGAAAACTCGGAAGACCCTGCTTCGGCTTCCAAATCTGTTGAATCTTGTAATGTCACTCCTACTCTGGCTTCTGTGGCAGAACCACCAAATGATAGTAACATTCCAGCTCATCCTTCAGGTTATAATAATGAATTTGAGAACGGGAGTATTGCAATTAATTTCAATTCGATCTCTCCCATGGCCAATGGTGAAGAAGAACATCATGGAAATCCCAACTTAAACTCTCCAGCACCCATGACCAGCAATGAAGAAACAGAGGAGTGTCATGGAAGAAGCGATTCTGTAATTGGAACTCAAGGTTCAACCAATCTGGACTATAGAACTTCAGATAGTAGACTAGTTTCAAGTCAGAACCCACACAACATTGGCGAGTCTAGTTTCTCTGCTGTAGATCCACTTGCTAGTCTTGTTACTTACTCAGGGCCAATAGCTTATTCTGGAAGCATCTCGCTTCGGTCAGAAAGTAGCACAACAAGCACACGTTCTTTTGCCTTTCCTGTATTACAGTCTGAATGGAATAGTAGCCCGGTTAAAATGGTAAAGGCTGAACGGAGGCATTACCGGAAGTATCGAGGTTGGAGGGAGGGCCTTCTATGTTGCAAATTCTGA MKLESDSSFYHSMTSPNCAPESLECNYSSTELQHQVTNNNPIGLSCQEKINQEDAIQSSYSSGDGNSCITTKINHSSVDVFDNNANCISAFEAPSNRKPSFSYVDKSVMECQMSKTIVCDKEINVNDVKDICIDEGVSSLDNFFFKSTDEKSISKISPLEEDQNEGSIKEKENSSEVSKFIAVDHKVSLEDHFAMDWTNHNDAKDLTQIEEEKFNLSEPKVLMQKLDKKSYSSESLDNIDVQISSEKENSEDPASASKSVESCNVTPTLASVAEPPNDSNIPAHPSGYNNEFENGSIAINFNSISPMANGEEEHHGNPNLNSPAPMTSNEETEECHGRSDSVIGTQGSTNLDYRTSDSRLVSSQNPHNIGESSFSAVDPLASLVTYSGPIAYSGSISLRSESSTTSTRSFAFPVLQSEWNSSPVKMVKAERRHYRKYRGWREGLLCCKF Homology
BLAST of CaUC08G150070 vs. NCBI nr
Match: XP_038886032.1 (uncharacterized protein LOC120076323 [Benincasa hispida] >XP_038886033.1 uncharacterized protein LOC120076323 [Benincasa hispida] >XP_038886034.1 uncharacterized protein LOC120076323 [Benincasa hispida] >XP_038886035.1 uncharacterized protein LOC120076323 [Benincasa hispida] >XP_038886036.1 uncharacterized protein LOC120076323 [Benincasa hispida] >XP_038886037.1 uncharacterized protein LOC120076323 [Benincasa hispida] >XP_038886038.1 uncharacterized protein LOC120076323 [Benincasa hispida] >XP_038886039.1 uncharacterized protein LOC120076323 [Benincasa hispida] >XP_038886040.1 uncharacterized protein LOC120076323 [Benincasa hispida]) HSP 1 Score: 719.9 bits (1857), Expect = 1.3e-203 Identity = 375/437 (85.81%), Postives = 402/437 (91.99%), Query Frame = 0
BLAST of CaUC08G150070 vs. NCBI nr
Match: XP_011657412.1 (uncharacterized protein LOC101217989 [Cucumis sativus] >XP_011657413.1 uncharacterized protein LOC101217989 [Cucumis sativus] >XP_031743659.1 uncharacterized protein LOC101217989 [Cucumis sativus] >XP_031743660.1 uncharacterized protein LOC101217989 [Cucumis sativus] >XP_031743661.1 uncharacterized protein LOC101217989 [Cucumis sativus] >KAE8647259.1 hypothetical protein Csa_018252 [Cucumis sativus]) HSP 1 Score: 671.4 bits (1731), Expect = 5.4e-189 Identity = 362/450 (80.44%), Postives = 390/450 (86.67%), Query Frame = 0
BLAST of CaUC08G150070 vs. NCBI nr
Match: XP_008445414.1 (PREDICTED: uncharacterized protein LOC103488449 isoform X1 [Cucumis melo] >XP_008445415.1 PREDICTED: uncharacterized protein LOC103488449 isoform X1 [Cucumis melo] >XP_008445416.1 PREDICTED: uncharacterized protein LOC103488449 isoform X1 [Cucumis melo] >XP_008445417.1 PREDICTED: uncharacterized protein LOC103488449 isoform X1 [Cucumis melo] >XP_008445418.1 PREDICTED: uncharacterized protein LOC103488449 isoform X1 [Cucumis melo] >XP_008445420.1 PREDICTED: uncharacterized protein LOC103488449 isoform X1 [Cucumis melo]) HSP 1 Score: 668.7 bits (1724), Expect = 3.5e-188 Identity = 363/449 (80.85%), Postives = 388/449 (86.41%), Query Frame = 0
BLAST of CaUC08G150070 vs. NCBI nr
Match: XP_008445421.1 (PREDICTED: uncharacterized protein LOC103488449 isoform X2 [Cucumis melo] >XP_008445423.1 PREDICTED: uncharacterized protein LOC103488449 isoform X2 [Cucumis melo] >XP_008445424.1 PREDICTED: uncharacterized protein LOC103488449 isoform X2 [Cucumis melo]) HSP 1 Score: 648.7 bits (1672), Expect = 3.8e-182 Identity = 352/437 (80.55%), Postives = 376/437 (86.04%), Query Frame = 0
BLAST of CaUC08G150070 vs. NCBI nr
Match: KAA0064783.1 (uncharacterized protein E6C27_scaffold82G00900 [Cucumis melo var. makuwa]) HSP 1 Score: 647.1 bits (1668), Expect = 1.1e-181 Identity = 351/437 (80.32%), Postives = 375/437 (85.81%), Query Frame = 0
BLAST of CaUC08G150070 vs. ExPASy TrEMBL
Match: A0A1S3BDI6 (uncharacterized protein LOC103488449 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488449 PE=4 SV=1) HSP 1 Score: 668.7 bits (1724), Expect = 1.7e-188 Identity = 363/449 (80.85%), Postives = 388/449 (86.41%), Query Frame = 0
BLAST of CaUC08G150070 vs. ExPASy TrEMBL
Match: A0A0A0KFP8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G370190 PE=4 SV=1) HSP 1 Score: 649.4 bits (1674), Expect = 1.1e-182 Identity = 351/438 (80.14%), Postives = 378/438 (86.30%), Query Frame = 0
BLAST of CaUC08G150070 vs. ExPASy TrEMBL
Match: A0A1S3BCP3 (uncharacterized protein LOC103488449 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103488449 PE=4 SV=1) HSP 1 Score: 648.7 bits (1672), Expect = 1.8e-182 Identity = 352/437 (80.55%), Postives = 376/437 (86.04%), Query Frame = 0
BLAST of CaUC08G150070 vs. ExPASy TrEMBL
Match: A0A5A7V9F8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G00900 PE=4 SV=1) HSP 1 Score: 647.1 bits (1668), Expect = 5.3e-182 Identity = 351/437 (80.32%), Postives = 375/437 (85.81%), Query Frame = 0
BLAST of CaUC08G150070 vs. ExPASy TrEMBL
Match: A0A6J1KPB6 (uncharacterized protein LOC111496042 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111496042 PE=4 SV=1) HSP 1 Score: 591.3 bits (1523), Expect = 3.5e-165 Identity = 322/449 (71.71%), Postives = 364/449 (81.07%), Query Frame = 0
BLAST of CaUC08G150070 vs. TAIR 10
Match: AT2G03810.1 (18S pre-ribosomal assembly protein gar2-related ) HSP 1 Score: 138.7 bits (348), Expect = 1.2e-32 Identity = 120/389 (30.85%), Postives = 193/389 (49.61%), Query Frame = 0
BLAST of CaUC08G150070 vs. TAIR 10
Match: AT2G03810.2 (18S pre-ribosomal assembly protein gar2-related ) HSP 1 Score: 138.7 bits (348), Expect = 1.2e-32 Identity = 120/389 (30.85%), Postives = 193/389 (49.61%), Query Frame = 0
BLAST of CaUC08G150070 vs. TAIR 10
Match: AT2G03810.3 (18S pre-ribosomal assembly protein gar2-related ) HSP 1 Score: 138.7 bits (348), Expect = 1.2e-32 Identity = 120/389 (30.85%), Postives = 193/389 (49.61%), Query Frame = 0
BLAST of CaUC08G150070 vs. TAIR 10
Match: AT2G03810.4 (18S pre-ribosomal assembly protein gar2-related ) HSP 1 Score: 138.7 bits (348), Expect = 1.2e-32 Identity = 120/389 (30.85%), Postives = 193/389 (49.61%), Query Frame = 0
BLAST of CaUC08G150070 vs. TAIR 10
Match: AT1G13650.2 (BEST Arabidopsis thaliana protein match is: 18S pre-ribosomal assembly protein gar2-related (TAIR:AT2G03810.4); Has 3688 Blast hits to 1629 proteins in 255 species: Archae - 22; Bacteria - 222; Metazoa - 684; Fungi - 292; Plants - 62; Viruses - 14; Other Eukaryotes - 2392 (source: NCBI BLink). ) HSP 1 Score: 63.2 bits (152), Expect = 6.3e-10 Identity = 45/124 (36.29%), Postives = 62/124 (50.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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