CaUC08G149580 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC08G149580
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial-like
Location	Ciama_Chr08: 21114427 .. 21117536 (-)
RNA-Seq Expression	CaUC08G149580
Synteny	CaUC08G149580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGATCGCCTCCATTTCTATGCTCCGCCACCACACCACCGCTATCGCCGCCACTTCATCAATCCCAGTCTTCGGCAATGTTCTCCGGCGAGTCTTCAGCTTCCGCTGCCTCTCTATTGTTGCCAAACAGCATAACCCTAACAATGTCTCCAATAAGCCTCCGCCAAGCAAGAATCTACTCCGAGCTAAACATACTTTCAAGGATTATTCATCTCTTGCACCGGTCCTCTCTCCTCAAGACAATCCACCTCTCTCCGAGTCTCAAGCCATCGGCACCGTCGCTGCTGCCCAAGCCAATTTCATGCGCGTAATTGTTCAGTCGCTTCCTTCTCAACTTTCTGCTCGTCCGAACGACGATTCGGAACTTTCTGGAAGCTTAGAAGGTGAGTCTCCGGAATCTTCTAGGCTTGGAGTTGAGTTGCTGTGCGTTGTGAAGGCTGTGCTGAAGAAGATAAAGAGGAGAGTGTTAGTCGGGGACAAAGTGGTTGTTGGTTCCATTGATTGGGTGGATCGCCGGGGAATGATCGAGAATGTCTTCCAAAGAAGCTCGGAGATCCTTGATCCTCCGGTGGCCAATGTGGATCACTTGCTTGTGCTCTTCTCCATGGATCAGCCGAAGTTAGAGCCGTTTACACTTACGAGGTTTCTAGTTGAAGCAGAGTCTACAGGCATTCCACTGACGCTAGGTCTCAATAAGTTGGAACTCGTTGACGAAGAGGTTGTGTTTTCAATCTTCTACTTTCTAAACTCTCTGACAACTATTTTCAATACTTTCCAATACGTTTCCCTATGAGTAGTAATCACTAATATAGCAGAATATCATGCATGAATGATTTTTTGAACATCGAAACTCAACAAAACCAATGAAGGTTTAATATCATGTGCAAAAAGAAGATACACAATCACAATGGTAATGTTGTAGTTCTAGAATGTAGCTATGGTAACATAACAATTTTGCTTCTAGTTTGGAAATGATTAGGAATAAATGAGCCTCAACTAAAGCATTGATTTAGTCCTACTTATACCACAGTTTCGTTGCTTGGTTGTCACCCTCTTTATTTTTTGTCATGGGTGCTTCTTTTTCTTATAGTATAATCCCTCAGCCCTCAACTTGTAATTGTAACAAGAAACTTGGTTCTTACGTTTCTTGTGATATTGATATTCTTTACTCTTTGATCAAACTTTGTCATAATTACGCATGTATTTCCTTTGTTAATGCTGACATTGGTTAGTAATGGCATATACAGACACTAGTTTCCTGGAAATCCAGACTACGTAGCTGGGGTTATGACCCCATTTTTTGCAGTGTTCAAACCAGGACTGGACTTGATTCCCTTGCATATATTTTGAGAGATCAAACTACAGTTATTGTGGGCCCAAGTGGAGTTGGGAAATCAAGTCTCATTAATGCTCTCAGAAACAAAAACCATGCCGCTGATGTTGTAGACGGAGATAATTGGTTTGATCCGGTGTGTTTGATCATTCTTCCAATTTAACTCTATGTTGATTGATGTATAAATTCTGGGACTTTCTGGATCACTAGGATCATAAGTCATAATAGTTTCTTTATGTTTCTGGTCTATTCACAGATTCTTGGTAGCAAGTGGTTCGAGGATCAGCGTGTTGCAGAAGTTTCAACAAGAAGTGGTAGAGGGAAACATACTACTCGTCATGTTTCTCTCCTACCATTGTCGGGAGGGGGCTATCTGGCAGACACTCCTGGTTTTAACCAGCCCAGTTTGATGAAAATAACCAAGCAATCTCTTGCCCAAGCCTTCCCCGAGGTTTAGACTACTTTGCAACGTTGACATTGACTGTGATTAAGATTTCTGATTTCTGCCACAAATTTCTAACTTCGGTAGCATTTCTTGGGTTCAACTAAATTCTCTACAGATCCGGAAAATACTTCTTGCCAGCGAACCTGCTAAATGCTCTTTTAATGATTGCTTACATCTTGGGGAACCGGGATGTGTTATTAAAGGAGATTGGGAGCGATACCAGTACTATTTCCAACTTCTTGATGAAATCAGAATCAGGGAAGAATTCCAGTTGAGAACATTTGGAACGAAAAGAGAGGGGGATGTAAGGTATGTAAATTTAGAGGTTGTGAATAATAACAATTTTTCTTCCTTTATATGTAGTTGAGGGGGTAGTACATTAAAGAGAATGCAATGCTCTGTGATGTTATTTCATTTCGATATTATCTTTTAGATTTTTAACAAATTGCACAATCCTAAACATTGGAAGGGAATGTCTGCAAGGGGCTGTTTGGGGATGGTAATGGAATGAACTTGTAATATAATGTAATCTAAAGTTCATGTATGGATTGAGCACTTTGGGCCCGAATTGTAACACCAAACTCATTCTGTTCCTTCAGTTTTCATCCCAACCCTCTTTCCTAACGTTTTCACGCTTCATGATCCCATTTTCATTCCGCCCTCAGTTCTTCACTTGTTCCAACACTCCTTAGATTTCCAATAATCCTGGTTAGATTCCAGCCTCGCAAGCAGAACCCAAATATTGTTTATATGTGCCTTTGATCAATTGGCACTACTGCCGTAGACTTATCCATTGTGAAGGAAAACGGGGAACCCAACCCTCCATTGCTGCTTTCTCTAAATATGCATCAACTTGATATCCTAATGACTTTCGATGATCTTATCTTGTGCAACAATGATTTCTAATCTCATTTGGTAAATAATTATGTTATATATGCATTTATTTACGTAGAACACCTGAGACTTCAGGATTTAGGGGCATCGCTGTCGAAGTTGAAACACCAGAAGTTCTCCTAGTGACCTATTGCCATTTATTTACTTATATGTAGTATGAATAGCGATGTTGCTTAAGTAGCTCAAATCCTTAATTCTCTCATATGAACCAAATCCGAAACCATATAATGATGGAACTTCAATTTGCAGGATTAAGGTGGGAGATATGGGTGCTCAGCAAGCAGAACCAAGGTTGGAGCTCAAAAAGCATAGGAGACAGTCTCGTAAGAGAGTGAACCAATCGATACTTGATGAGTTGGATGAGTTGGAAGACGAAGATGAGTCGTTGGAGGAAAACGATCCTATTTTGAGGGCAATAAGGAATGAAAACCAATAG

mRNA sequence

ATGGCGATCGCCTCCATTTCTATGCTCCGCCACCACACCACCGCTATCGCCGCCACTTCATCAATCCCAGTCTTCGGCAATGTTCTCCGGCGAGTCTTCAGCTTCCGCTGCCTCTCTATTGTTGCCAAACAGCATAACCCTAACAATGTCTCCAATAAGCCTCCGCCAAGCAAGAATCTACTCCGAGCTAAACATACTTTCAAGGATTATTCATCTCTTGCACCGGTCCTCTCTCCTCAAGACAATCCACCTCTCTCCGAGTCTCAAGCCATCGGCACCGTCGCTGCTGCCCAAGCCAATTTCATGCGCGTAATTGTTCAGTCGCTTCCTTCTCAACTTTCTGCTCGTCCGAACGACGATTCGGAACTTTCTGGAAGCTTAGAAGGTGAGTCTCCGGAATCTTCTAGGCTTGGAGTTGAGTTGCTGTGCGTTGTGAAGGCTGTGCTGAAGAAGATAAAGAGGAGAGTGTTAGTCGGGGACAAAGTGGTTGTTGGTTCCATTGATTGGGTGGATCGCCGGGGAATGATCGAGAATGTCTTCCAAAGAAGCTCGGAGATCCTTGATCCTCCGGTGGCCAATGTGGATCACTTGCTTGTGCTCTTCTCCATGGATCAGCCGAAGTTAGAGCCGTTTACACTTACGAGGTTTCTAGTTGAAGCAGAGTCTACAGGCATTCCACTGACGCTAGGTCTCAATAAGTTGGAACTCGTTGACGAAGAGACACTAGTTTCCTGGAAATCCAGACTACGTAGCTGGGGTTATGACCCCATTTTTTGCAGTGTTCAAACCAGGACTGGACTTGATTCCCTTGCATATATTTTGAGAGATCAAACTACAGTTATTGTGGGCCCAAGTGGAGTTGGGAAATCAAGTCTCATTAATGCTCTCAGAAACAAAAACCATGCCGCTGATGTTGTAGACGGAGATAATTGGTTTGATCCGATTCTTGGTAGCAAGTGGTTCGAGGATCAGCGTGTTGCAGAAGTTTCAACAAGAAGTGGTAGAGGGAAACATACTACTCGTCATGTTTCTCTCCTACCATTGTCGGGAGGGGGCTATCTGGCAGACACTCCTGGTTTTAACCAGCCCAGTTTGATGAAAATAACCAAGCAATCTCTTGCCCAAGCCTTCCCCGAGATCCGGAAAATACTTCTTGCCAGCGAACCTGCTAAATGCTCTTTTAATGATTGCTTACATCTTGGGGAACCGGGATGTGTTATTAAAGGAGATTGGGAGCGATACCAGTACTATTTCCAACTTCTTGATGAAATCAGAATCAGGGAAGAATTCCAGTTGAGAACATTTGGAACGAAAAGAGAGGGGGATGTAAGGATTAAGGTGGGAGATATGGGTGCTCAGCAAGCAGAACCAAGGTTGGAGCTCAAAAAGCATAGGAGACAGTCTCGTAAGAGAGTGAACCAATCGATACTTGATGAGTTGGATGAGTTGGAAGACGAAGATGAGTCGTTGGAGGAAAACGATCCTATTTTGAGGGCAATAAGGAATGAAAACCAATAG

Coding sequence (CDS)

ATGGCGATCGCCTCCATTTCTATGCTCCGCCACCACACCACCGCTATCGCCGCCACTTCATCAATCCCAGTCTTCGGCAATGTTCTCCGGCGAGTCTTCAGCTTCCGCTGCCTCTCTATTGTTGCCAAACAGCATAACCCTAACAATGTCTCCAATAAGCCTCCGCCAAGCAAGAATCTACTCCGAGCTAAACATACTTTCAAGGATTATTCATCTCTTGCACCGGTCCTCTCTCCTCAAGACAATCCACCTCTCTCCGAGTCTCAAGCCATCGGCACCGTCGCTGCTGCCCAAGCCAATTTCATGCGCGTAATTGTTCAGTCGCTTCCTTCTCAACTTTCTGCTCGTCCGAACGACGATTCGGAACTTTCTGGAAGCTTAGAAGGTGAGTCTCCGGAATCTTCTAGGCTTGGAGTTGAGTTGCTGTGCGTTGTGAAGGCTGTGCTGAAGAAGATAAAGAGGAGAGTGTTAGTCGGGGACAAAGTGGTTGTTGGTTCCATTGATTGGGTGGATCGCCGGGGAATGATCGAGAATGTCTTCCAAAGAAGCTCGGAGATCCTTGATCCTCCGGTGGCCAATGTGGATCACTTGCTTGTGCTCTTCTCCATGGATCAGCCGAAGTTAGAGCCGTTTACACTTACGAGGTTTCTAGTTGAAGCAGAGTCTACAGGCATTCCACTGACGCTAGGTCTCAATAAGTTGGAACTCGTTGACGAAGAGACACTAGTTTCCTGGAAATCCAGACTACGTAGCTGGGGTTATGACCCCATTTTTTGCAGTGTTCAAACCAGGACTGGACTTGATTCCCTTGCATATATTTTGAGAGATCAAACTACAGTTATTGTGGGCCCAAGTGGAGTTGGGAAATCAAGTCTCATTAATGCTCTCAGAAACAAAAACCATGCCGCTGATGTTGTAGACGGAGATAATTGGTTTGATCCGATTCTTGGTAGCAAGTGGTTCGAGGATCAGCGTGTTGCAGAAGTTTCAACAAGAAGTGGTAGAGGGAAACATACTACTCGTCATGTTTCTCTCCTACCATTGTCGGGAGGGGGCTATCTGGCAGACACTCCTGGTTTTAACCAGCCCAGTTTGATGAAAATAACCAAGCAATCTCTTGCCCAAGCCTTCCCCGAGATCCGGAAAATACTTCTTGCCAGCGAACCTGCTAAATGCTCTTTTAATGATTGCTTACATCTTGGGGAACCGGGATGTGTTATTAAAGGAGATTGGGAGCGATACCAGTACTATTTCCAACTTCTTGATGAAATCAGAATCAGGGAAGAATTCCAGTTGAGAACATTTGGAACGAAAAGAGAGGGGGATGTAAGGATTAAGGTGGGAGATATGGGTGCTCAGCAAGCAGAACCAAGGTTGGAGCTCAAAAAGCATAGGAGACAGTCTCGTAAGAGAGTGAACCAATCGATACTTGATGAGTTGGATGAGTTGGAAGACGAAGATGAGTCGTTGGAGGAAAACGATCCTATTTTGAGGGCAATAAGGAATGAAAACCAATAG

Protein sequence

MAIASISMLRHHTTAIAATSSIPVFGNVLRRVFSFRCLSIVAKQHNPNNVSNKPPPSKNLLRAKHTFKDYSSLAPVLSPQDNPPLSESQAIGTVAAAQANFMRVIVQSLPSQLSARPNDDSELSGSLEGESPESSRLGVELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVFQRSSEILDPPVANVDHLLVLFSMDQPKLEPFTLTRFLVEAESTGIPLTLGLNKLELVDEETLVSWKSRLRSWGYDPIFCSVQTRTGLDSLAYILRDQTTVIVGPSGVGKSSLINALRNKNHAADVVDGDNWFDPILGSKWFEDQRVAEVSTRSGRGKHTTRHVSLLPLSGGGYLADTPGFNQPSLMKITKQSLAQAFPEIRKILLASEPAKCSFNDCLHLGEPGCVIKGDWERYQYYFQLLDEIRIREEFQLRTFGTKREGDVRIKVGDMGAQQAEPRLELKKHRRQSRKRVNQSILDELDELEDEDESLEENDPILRAIRNENQ

Homology

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BLAST of CaUC08G149580 vs. NCBI nr
Match: XP_038885175.1 (small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial [Benincasa hispida] >XP_038885176.1 small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial [Benincasa hispida])

HSP 1 Score: 919.1 bits (2374), Expect = 1.7e-263
Identity = 468/498 (93.98%), Postives = 486/498 (97.59%), Query Frame = 0


Query: 1   MAIASISMLRHHTTAIAATSSIPVFGNVLRRVFSFRCLSIVAKQHNPNNVSNKPPPSKNL 60
           MAIASISMLRH TTAIAATSSIPVFGNVLRRVF+FRCLSIVAKQHNPNNVSNKPPPSKNL
Sbjct: 1   MAIASISMLRHQTTAIAATSSIPVFGNVLRRVFNFRCLSIVAKQHNPNNVSNKPPPSKNL 60

Query: 61  LRAKHTFKDYSSLAPVLSPQDNPPLSESQAIGTVAAAQANFMRVIVQSLPSQLSARPNDD 120
           LRAKHTFKDYSSLAPVLSPQDNPPLSESQAIGTVAAAQANFMRVIVQ+LPSQLS   ND+
Sbjct: 61  LRAKHTFKDYSSLAPVLSPQDNPPLSESQAIGTVAAAQANFMRVIVQALPSQLSDSSNDN 120

Query: 121 SELSGSLEGESPESSRLGVELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF 180
           SE SGSLE +S ESSRLGVELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIEN+F
Sbjct: 121 SERSGSLENDSSESSRLGVELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENIF 180

Query: 181 QRSSEILDPPVANVDHLLVLFSMDQPKLEPFTLTRFLVEAESTGIPLTLGLNKLELVDEE 240
           QRSSEIL+PPVANVDHLLVLFSMDQPKLEPFTLTRFLVEAESTGIPLTLGLNKLELVDEE
Sbjct: 181 QRSSEILEPPVANVDHLLVLFSMDQPKLEPFTLTRFLVEAESTGIPLTLGLNKLELVDEE 240

Query: 241 TLVSWKSRLRSWGYDPIFCSVQTRTGLDSLAYILRDQTTVIVGPSGVGKSSLINALRNKN 300
           TLVSWKSRLRSWGYDP+FCSVQTRTGLDSLAYILRDQTTVIVGPSGVGKSSLINALR+ +
Sbjct: 241 TLVSWKSRLRSWGYDPLFCSVQTRTGLDSLAYILRDQTTVIVGPSGVGKSSLINALRSNS 300

Query: 301 HAADVVDGDNWFDPILGSKWFEDQRVAEVSTRSGRGKHTTRHVSLLPLSGGGYLADTPGF 360
            AAD +DGDNWFD ILGSKWF+DQRVAEVSTRSGRGKHTTRHVSLLPLSGGGYLADTPGF
Sbjct: 301 RAADAIDGDNWFDQILGSKWFKDQRVAEVSTRSGRGKHTTRHVSLLPLSGGGYLADTPGF 360

Query: 361 NQPSLMKITKQSLAQAFPEIRKILLASEPAKCSFNDCLHLGEPGCVIKGDWERYQYYFQL 420
           NQPSLMK+TKQSLA+AFPEI+K+LLASEPAKCSFNDCLHLGEPGCVIKGDWERYQYYFQL
Sbjct: 361 NQPSLMKVTKQSLARAFPEIQKMLLASEPAKCSFNDCLHLGEPGCVIKGDWERYQYYFQL 420

Query: 421 LDEIRIREEFQLRTFGTKREGDVRIKVGDMGAQQAEPRLELKKHRRQSRKRVNQSILDEL 480
           LDEIRIREEFQLRTFGTKREGDVRIKVGDMGA+QAEPRLELKKHRRQSRKRVNQSIL+EL
Sbjct: 421 LDEIRIREEFQLRTFGTKREGDVRIKVGDMGARQAEPRLELKKHRRQSRKRVNQSILEEL 480

Query: 481 DELEDEDESLEENDPILR 499
           DELEDED+S EENDPILR
Sbjct: 481 DELEDEDDS-EENDPILR 497

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BLAST of CaUC08G149580 vs. NCBI nr
Match: XP_004144195.1 (small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial [Cucumis sativus] >KGN47617.1 hypothetical protein Csa_018974 [Cucumis sativus])

HSP 1 Score: 914.8 bits (2363), Expect = 3.2e-262
Identity = 467/505 (92.48%), Postives = 483/505 (95.64%), Query Frame = 0


Query: 1   MAIASISMLRHHTTAIAATSSIPVFGNVLRRVFSFRCLSIVAKQHNPNNVSNKPPPSKNL 60
           MAIASISMLRHHT AIAATSSIPVFGNVLRRVF+FRC SIVAKQHNPNNVSNKPPPSKNL
Sbjct: 1   MAIASISMLRHHTAAIAATSSIPVFGNVLRRVFNFRCFSIVAKQHNPNNVSNKPPPSKNL 60

Query: 61  LRAKHTFKDYSSLAPVLSPQDNPPLSESQAIGTVAAAQANFMRVIVQSLPSQLSARPNDD 120
           LRAKHTFKDYSSLAPVLSPQDNPPLSESQAIGTVAAAQANFMRVIVQ+LPSQ S  PNDD
Sbjct: 61  LRAKHTFKDYSSLAPVLSPQDNPPLSESQAIGTVAAAQANFMRVIVQTLPSQFSQSPNDD 120

Query: 121 SELSGSLEGESPESSRLGVELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF 180
            E SGSLE +S +SS LGVELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF
Sbjct: 121 LERSGSLEDDSSKSSMLGVELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF 180

Query: 181 QRSSEILDPPVANVDHLLVLFSMDQPKLEPFTLTRFLVEAESTGIPLTLGLNKLELVDEE 240
           QRSSEILDPPVANVDHLLVLFSMDQP+LEPFTLTRFLVEAESTGIPLTLGLNKLELVDEE
Sbjct: 181 QRSSEILDPPVANVDHLLVLFSMDQPRLEPFTLTRFLVEAESTGIPLTLGLNKLELVDEE 240

Query: 241 TLVSWKSRLRSWGYDPIFCSVQTRTGLDSLAYILRDQTTVIVGPSGVGKSSLINALRNKN 300
           TLVSWKSRLRSWGYDP+FCSVQT  GLDSLA+ILRDQTTVIVGPSGVGKSSLINALRN N
Sbjct: 241 TLVSWKSRLRSWGYDPLFCSVQTGAGLDSLAFILRDQTTVIVGPSGVGKSSLINALRNSN 300

Query: 301 HAADVVDGDNWFDPILGSKWFEDQRVAEVSTRSGRGKHTTRHVSLLPLSGGGYLADTPGF 360
            A D  D DNWFDPILGSKWFE+QRVAEVSTRSGRGKHTTRHVSLLPLSGGGYLADTPGF
Sbjct: 301 RATDASDTDNWFDPILGSKWFEEQRVAEVSTRSGRGKHTTRHVSLLPLSGGGYLADTPGF 360

Query: 361 NQPSLMKITKQSLAQAFPEIRKILLASEPAKCSFNDCLHLGEPGCVIKGDWERYQYYFQL 420
           NQPSLMKITKQSLAQAFPEI+K+L ASEPAKCSFNDCLHLGEPGCVIKGDWERYQYYFQL
Sbjct: 361 NQPSLMKITKQSLAQAFPEIQKMLHASEPAKCSFNDCLHLGEPGCVIKGDWERYQYYFQL 420

Query: 421 LDEIRIREEFQLRTFGTKREGDVRIKVGDMGAQQAEPRLELKKHRRQSRKRVNQSILDEL 480
           LDEIRIREEFQLRTFGTKREGDVRIKVG+MG +QAEPRLELKKHRRQSRKRVNQSILDEL
Sbjct: 421 LDEIRIREEFQLRTFGTKREGDVRIKVGEMGVKQAEPRLELKKHRRQSRKRVNQSILDEL 480

Query: 481 DELEDEDESLEENDPILRAIRNENQ 506
           DELEDED+ LEE +PILRA++NENQ
Sbjct: 481 DELEDEDD-LEETNPILRAMKNENQ 504

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BLAST of CaUC08G149580 vs. NCBI nr
Match: XP_022132325.1 (small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial isoform X2 [Momordica charantia])

HSP 1 Score: 908.7 bits (2347), Expect = 2.3e-260
Identity = 464/507 (91.52%), Postives = 483/507 (95.27%), Query Frame = 0


Query: 1   MAIASISMLRHHTTAIAATSSIPVFGNVLRRVFSFRCLSIVAKQHNPNNVSNKPPPSKNL 60
           MAIASISMLRHHT   AAT+SIP FGNVLRR F+ RC S+VAKQHNPNNVSNKPPPSKNL
Sbjct: 1   MAIASISMLRHHTA--AATASIPAFGNVLRRFFNVRCFSVVAKQHNPNNVSNKPPPSKNL 60

Query: 61  LRAKHTFKDYSSLAPVLSPQDNPPLSESQAIGTVAAAQANFMRVIVQSLPSQLSARPNDD 120
           LRAKHTFKDYSSLAP LSPQDNPPLSESQAIGTVAAAQANFMRVIVQSLPSQLS   N D
Sbjct: 61  LRAKHTFKDYSSLAPALSPQDNPPLSESQAIGTVAAAQANFMRVIVQSLPSQLSDSSNQD 120

Query: 121 SELSGSLEGESPESSRLGVELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF 180
           SE SGSLEG+S ESSRLGVELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF
Sbjct: 121 SEPSGSLEGDSSESSRLGVELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF 180

Query: 181 QRSSEILDPPVANVDHLLVLFSMDQPKLEPFTLTRFLVEAESTGIPLTLGLNKLELVDEE 240
           QRSSEILDPPVANVDHLLVLFSMDQPKLE FTLTRFL+EAESTGIPLTLGLNKLELVDEE
Sbjct: 181 QRSSEILDPPVANVDHLLVLFSMDQPKLESFTLTRFLIEAESTGIPLTLGLNKLELVDEE 240

Query: 241 TLVSWKSRLRSWGYDPIFCSVQTRTGLDSLAYILRDQTTVIVGPSGVGKSSLINALRNKN 300
           TLVSWKSRLRSWGY+P+FCSVQT+TGLDSLAYILRDQTTVIVGPSGVGKSSLINALRN +
Sbjct: 241 TLVSWKSRLRSWGYEPLFCSVQTKTGLDSLAYILRDQTTVIVGPSGVGKSSLINALRNND 300

Query: 301 HAADVVDGDNWFDPILGSKWFEDQRVAEVSTRSGRGKHTTRHVSLLPLSGGGYLADTPGF 360
              D V+GDNWFDPILGSKWFEDQRVAEVSTRSGRGKHTTRHVSLLPLSGGGYLADTPGF
Sbjct: 301 RGVDAVEGDNWFDPILGSKWFEDQRVAEVSTRSGRGKHTTRHVSLLPLSGGGYLADTPGF 360

Query: 361 NQPSLMKITKQSLAQAFPEIRKILLASEPAKCSFNDCLHLGEPGCVIKGDWERYQYYFQL 420
           NQPSLMKITKQSLAQAFPEI+K+LLA+EPA+CSFNDCLHLGEPGCVIKGDWERYQYYFQL
Sbjct: 361 NQPSLMKITKQSLAQAFPEIQKMLLANEPARCSFNDCLHLGEPGCVIKGDWERYQYYFQL 420

Query: 421 LDEIRIREEFQLRTFGTKREGDVRIKVGDMGAQQAEPRLELKKHRRQSRKRVNQSILDEL 480
           LDEIRIREEFQLRTFGTKREGDVRIKVGDMGAQQAEPRLELKKHRRQSRKRVNQSIL+EL
Sbjct: 421 LDEIRIREEFQLRTFGTKREGDVRIKVGDMGAQQAEPRLELKKHRRQSRKRVNQSILNEL 480

Query: 481 DELEDEDE--SLEENDPILRAIRNENQ 506
           DELEDEDE  SL++ DPIL+A+RNE Q
Sbjct: 481 DELEDEDEDDSLDKEDPILKAMRNEQQ 505

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BLAST of CaUC08G149580 vs. NCBI nr
Match: KAA0064736.1 (putative ribosome biogenesis GTPase RsgA 1 [Cucumis melo var. makuwa])

HSP 1 Score: 908.7 bits (2347), Expect = 2.3e-260
Identity = 463/505 (91.68%), Postives = 479/505 (94.85%), Query Frame = 0


Query: 1   MAIASISMLRHHTTAIAATSSIPVFGNVLRRVFSFRCLSIVAKQHNPNNVSNKPPPSKNL 60
           MAIASISMLRHHT A+AATSS PVFGNV+RRVF FRC SIVAKQHNPNNVSNKPPPSKNL
Sbjct: 1   MAIASISMLRHHTAALAATSSFPVFGNVIRRVFKFRCFSIVAKQHNPNNVSNKPPPSKNL 60

Query: 61  LRAKHTFKDYSSLAPVLSPQDNPPLSESQAIGTVAAAQANFMRVIVQSLPSQLSARPNDD 120
           LRAKHTFKDYSSLAPVLSPQDNPPLSESQAIGTVAAAQANFMRVIVQ+LPSQ S   NDD
Sbjct: 61  LRAKHTFKDYSSLAPVLSPQDNPPLSESQAIGTVAAAQANFMRVIVQTLPSQFSESSNDD 120

Query: 121 SELSGSLEGESPESSRLGVELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF 180
            E SGSLE +S ESS LGVELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF
Sbjct: 121 LERSGSLENDSSESSMLGVELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF 180

Query: 181 QRSSEILDPPVANVDHLLVLFSMDQPKLEPFTLTRFLVEAESTGIPLTLGLNKLELVDEE 240
           QR SEILDPPVANVDHLLVLFSMDQP+LEPFTLTRFLVEAESTGIPLTLGLNKLELVDEE
Sbjct: 181 QRKSEILDPPVANVDHLLVLFSMDQPRLEPFTLTRFLVEAESTGIPLTLGLNKLELVDEE 240

Query: 241 TLVSWKSRLRSWGYDPIFCSVQTRTGLDSLAYILRDQTTVIVGPSGVGKSSLINALRNKN 300
           T+VSWKSRLRSWGYDP+FCSVQT TGLD+LAYILRDQTTVIVGPSGVGKSSLINALRN N
Sbjct: 241 TVVSWKSRLRSWGYDPLFCSVQTGTGLDTLAYILRDQTTVIVGPSGVGKSSLINALRNNN 300

Query: 301 HAADVVDGDNWFDPILGSKWFEDQRVAEVSTRSGRGKHTTRHVSLLPLSGGGYLADTPGF 360
            AAD +D DNWFDPILGSKWFEDQRVAEVSTRSGRGKHTTRHVSLLPL+GGGYLADTPGF
Sbjct: 301 RAADALDTDNWFDPILGSKWFEDQRVAEVSTRSGRGKHTTRHVSLLPLTGGGYLADTPGF 360

Query: 361 NQPSLMKITKQSLAQAFPEIRKILLASEPAKCSFNDCLHLGEPGCVIKGDWERYQYYFQL 420
           NQPSLMKITKQSLAQAFPEI+K+L ASEPAKCSFNDCLHLGEPGC+IKGDWERYQYYFQL
Sbjct: 361 NQPSLMKITKQSLAQAFPEIQKMLRASEPAKCSFNDCLHLGEPGCIIKGDWERYQYYFQL 420

Query: 421 LDEIRIREEFQLRTFGTKREGDVRIKVGDMGAQQAEPRLELKKHRRQSRKRVNQSILDEL 480
           LDEIRIREEFQLRTFGTKREGDVRIKVG MGAQQAEPRLELKKHRRQSRKRVNQSILDEL
Sbjct: 421 LDEIRIREEFQLRTFGTKREGDVRIKVGVMGAQQAEPRLELKKHRRQSRKRVNQSILDEL 480

Query: 481 DELEDEDESLEENDPILRAIRNENQ 506
           DE ED+   LEE DPILRA++NENQ
Sbjct: 481 DEDEDD---LEETDPILRAMKNENQ 502

[Close]

BLAST of CaUC08G149580 vs. NCBI nr
Match: XP_023536955.1 (small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 907.9 bits (2345), Expect = 3.9e-260
Identity = 463/506 (91.50%), Postives = 484/506 (95.65%), Query Frame = 0


Query: 1   MAIASISMLRHHTTAIAATSSIPVFGNVLRRVFSFRCLSIVAKQHNPNNVSNKPPPSKNL 60
           MAIASIS+LRHH+T+IAA +S+P FGN+LRR F+ RCLSIVAKQHNPNNVSNKPPPSKNL
Sbjct: 1   MAIASISILRHHSTSIAAIASVPAFGNILRRCFNVRCLSIVAKQHNPNNVSNKPPPSKNL 60

Query: 61  LRAKHTFKDYSSLAPVLSPQDNPPLSESQAIGTVAAAQANFMRVIVQSLPSQLSARPNDD 120
           LRAKHTFK+YSSLAPVLSPQD PPLSESQAIGTVAAAQANFMRVIVQSLPSQLS   N D
Sbjct: 61  LRAKHTFKNYSSLAPVLSPQDIPPLSESQAIGTVAAAQANFMRVIVQSLPSQLSDSSNSD 120

Query: 121 SELSGSLEGESPESSRLGVELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF 180
           SE SGSLEG+S +SSRLG+ELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF
Sbjct: 121 SERSGSLEGDSSDSSRLGIELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF 180

Query: 181 QRSSEILDPPVANVDHLLVLFSMDQPKLEPFTLTRFLVEAESTGIPLTLGLNKLELVDEE 240
           QRSSEILDPPVANVDHLLVLFS+DQPKLEPFTLTRFLVEAESTGIPLTLGLNKLELVDEE
Sbjct: 181 QRSSEILDPPVANVDHLLVLFSIDQPKLEPFTLTRFLVEAESTGIPLTLGLNKLELVDEE 240

Query: 241 TLVSWKSRLRSWGYDPIFCSVQTRTGLDSLAYILRDQTTVIVGPSGVGKSSLINALRNKN 300
           T+VSWKSRLRSWGYDP+FCSVQTR GLDSLAYILRDQTTVIVGPSGVGKSSLINALR+ N
Sbjct: 241 TVVSWKSRLRSWGYDPLFCSVQTRIGLDSLAYILRDQTTVIVGPSGVGKSSLINALRSNN 300

Query: 301 HAADVVDGDNWFDPILGSKWFEDQRVAEVSTRSGRGKHTTRHVSLLPLSGGGYLADTPGF 360
            AAD V+GDNWFDPI  SKWFEDQRVAEVSTRSGRGKHTTRHVSLLPL GGGYLADTPGF
Sbjct: 301 RAADAVEGDNWFDPIRDSKWFEDQRVAEVSTRSGRGKHTTRHVSLLPLMGGGYLADTPGF 360

Query: 361 NQPSLMKITKQSLAQAFPEIRKILLASEPAKCSFNDCLHLGEPGCVIKGDWERYQYYFQL 420
           NQPSLMKITKQSLAQAFPEIR  LLASEPAKCSFNDCLHLGEPGCVI GDWERYQYYFQL
Sbjct: 361 NQPSLMKITKQSLAQAFPEIRNKLLASEPAKCSFNDCLHLGEPGCVINGDWERYQYYFQL 420

Query: 421 LDEIRIREEFQLRTFGTKREGDVRIKVGDMGAQQAEPRLELKKHRRQSRKRVNQSILDEL 480
           LDEIRIREEFQLRTFGTKREGDVRIKVGDMGAQQAEPRLELKKHRRQSRKRVNQSIL+EL
Sbjct: 421 LDEIRIREEFQLRTFGTKREGDVRIKVGDMGAQQAEPRLELKKHRRQSRKRVNQSILNEL 480

Query: 481 DELEDE-DESLEENDPILRAIRNENQ 506
           DELEDE D+SLEE+DPILRA+RNEN+
Sbjct: 481 DELEDEDDDSLEEDDPILRAMRNENK 506

[Close]

BLAST of CaUC08G149580 vs. ExPASy Swiss-Prot
Match: Q4V399 (Small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=rsgA PE=2 SV=1)

HSP 1 Score: 629.4 bits (1622), Expect = 3.5e-179
Identity = 322/448 (71.88%), Postives = 373/448 (83.26%), Query Frame = 0


Query: 60  LLRAKHTFKDY-SSLAPVLSPQDNPPLSESQAIGTVAAAQANFMRVIVQSLPSQLSARPN 119
           +LRAKH  K+Y SSL+PVLSP+  P L ESQAIGTVA AQANFMRVIVQ + + +++  +
Sbjct: 1   MLRAKHIGKNYSSSLSPVLSPEHKPSLLESQAIGTVATAQANFMRVIVQDVANSVTS--D 60

Query: 120 DDSELSGSLEGESPESSRLGVELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIEN 179
           DD+           +SS+ GVELLCVV+AVLKKI+RRVLVGDKV+VGSIDWVDRRGMIEN
Sbjct: 61  DDN-----------DSSKTGVELLCVVRAVLKKIRRRVLVGDKVLVGSIDWVDRRGMIEN 120

Query: 180 VFQRSSEILDPPVANVDHLLVLFSMDQPKLEPFTLTRFLVEAESTGIPLTLGLNKLELVD 239
           VF R SEILDPPVANVDHLLVLFS+DQPKLEPFTLTRFLVEAEST IPLTL LNK EL+ 
Sbjct: 121 VFHRRSEILDPPVANVDHLLVLFSLDQPKLEPFTLTRFLVEAESTRIPLTLALNKTELIS 180

Query: 240 EETLVSWKSRLRSWGYDPIFCSVQTRTGLDSLAYILRDQTTVIVGPSGVGKSSLINALRN 299
           EE L +WK RLR W Y+P+FCSV T+ GLD +A++LRDQT+VIVGPSGVGKSSLIN LR+
Sbjct: 181 EEELETWKIRLRGWNYEPLFCSVGTKDGLDDIAFVLRDQTSVIVGPSGVGKSSLINVLRS 240

Query: 300 KNHAADVVDGDNWFDPILGSKWFEDQRVAEVSTRSGRGKHTTRHVSLLPLSGGGYLADTP 359
            NH   VV+ +NWF+P+LG+KWF+DQRV EVS+RSGRGKHTTR+VSLLP+S GGYLADTP
Sbjct: 241 -NHGGGVVEDENWFEPMLGNKWFDDQRVGEVSSRSGRGKHTTRNVSLLPVSEGGYLADTP 300

Query: 360 GFNQPSLMKITKQSLAQAFPEIRKILLASEPAKCSFNDCLHLGEPGCVIKGDWERYQYYF 419
           GFNQPSL+K+TK SLA  FPEIR ++   E  KC F DCLH+GEPGCV+KGDWERY YY 
Sbjct: 301 GFNQPSLLKVTKHSLAHCFPEIRNMI---ESEKCGFRDCLHIGEPGCVVKGDWERYPYYL 360

Query: 420 QLLDEIRIREEFQLRTFGTKREGDVRIKVGDMGAQQAEPRLELKKHRRQSRKRVNQSILD 479
           QLLDEIRIREEFQLRTFGTKRE DVR KVGDMG + AEPRL  KKHRR+SRK+  Q+++ 
Sbjct: 361 QLLDEIRIREEFQLRTFGTKREDDVRYKVGDMGVKHAEPRLMPKKHRRESRKKTKQTMIS 420

Query: 480 ELDELEDEDESLE-ENDPILRAIRNENQ 506
           ELDE EDED  L  ENDPI++AI NEN+
Sbjct: 421 ELDEFEDEDSDLYIENDPIVQAIENENK 431

[Close]

BLAST of CaUC08G149580 vs. ExPASy Swiss-Prot
Match: F4HTL8 (Small ribosomal subunit biogenesis GTPase RsgA 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g67460 PE=2 SV=2)

HSP 1 Score: 287.3 bits (734), Expect = 3.3e-76
Identity = 158/274 (57.66%), Postives = 195/274 (71.17%), Query Frame = 0


Query: 25  FGNVLRRVFSFRCLSIVAKQHNPNNVSNKPPPSKNLLRAKHTFKDYSSLAPVLSPQDNPP 84
           FG  LR   SF  LS + +Q NP NV+  P P+K +LR        S LAPVL   + P 
Sbjct: 24  FGTGLRIRRSFYFLSAI-RQENP-NVTKNPHPNKTILR--------SFLAPVLPLDEKPN 83

Query: 85  LSESQAIGTVAAAQANFMRVIVQSLPSQLSARPNDDSELSGSLEGESPESSRLGVELLCV 144
           L E QAIGT+A A A++MRVIVQ +P                 E ++ E  ++GVELLCV
Sbjct: 84  LVELQAIGTIATALADYMRVIVQDVP-----------------ESDNGEDDKIGVELLCV 143

Query: 145 VKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVFQRSSEILDPPVANVDHLLVLFSMD 204
           V+ +LKKI R VLVGDKV+V  +DWVDRR  I NVF R SE+LDPPVANVDHL++LFS+D
Sbjct: 144 VRKLLKKIGRTVLVGDKVLVDKVDWVDRRAKIINVFDRVSEVLDPPVANVDHLVILFSLD 203

Query: 205 QPKLEPFTLTRFLVEAESTGIPLTLGLNKLELVDEETLVSWKSRLRSWGYDPIFCSVQTR 264
           QPK++PFTLTRFLVEAES GI +T+ LNK ELV +E + SWK RLRSW Y+P+FCSV T+
Sbjct: 204 QPKIDPFTLTRFLVEAESIGIRITVALNKCELVTQEEVESWKIRLRSWNYEPLFCSVGTK 263

Query: 265 TGLDSLAYILRDQTTVIVGPSGVGKSSLINALRN 299
            G+D +A+ LR+QT+VIVGPSGVGKSSLIN LR+
Sbjct: 264 VGIDEIAFNLRNQTSVIVGPSGVGKSSLINILRS 270

[Close]

BLAST of CaUC08G149580 vs. ExPASy Swiss-Prot
Match: Q3MG79 (Small ribosomal subunit biogenesis GTPase RsgA OS=Trichormus variabilis (strain ATCC 29413 / PCC 7937) OX=240292 GN=rsgA PE=3 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 1.6e-70
Identity = 165/397 (41.56%), Postives = 224/397 (56.42%), Query Frame = 0


Query: 89  QAIGTVAAAQANFMRV-IVQSLPSQLSARPNDDSELSGSLEGESPESSRLGVELLCVVKA 148
           Q +GTV A QANF +V + Q +    S    ++  L      +SP        LLC  + 
Sbjct: 8   QLLGTVVAVQANFYKVQLDQDVREPGSRGAGEEVHL------DSPLPLYPLSLLLCTRRT 67

Query: 149 VLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVFQRSSEILDPPVANVDHLLVLFSMDQPK 208
            LKKI ++V+VGD+VVV   DW   RG I  V  R +++  PP+AN D +L++F++  P 
Sbjct: 68  RLKKIGQQVMVGDRVVVEEPDWAGGRGAIAEVLSRQTQLDRPPIANADQILLVFAVADPP 127

Query: 209 LEPFTLTRFLVEAESTGIPLTLGLNKLELVDEETLVSWKSRLRSWGYDPIFCSVQTRTGL 268
           LEP+ L+RFLV+AE+TG+ + L LNK +LV  E       RL +WGY P+F SV+ +  +
Sbjct: 128 LEPYQLSRFLVKAETTGLDVVLCLNKSDLVSPEIQQQISDRLLAWGYQPLFISVEKQINI 187

Query: 269 DSLAYILRDQTTVIVGPSGVGKSSLINALRNKNHAADVVDGDNWFDPILGSKWFEDQRVA 328
           D +A  L ++ TV+ GPSGVGKSSLINAL       D+                 + RV 
Sbjct: 188 DQIAKYLSNKITVVAGPSGVGKSSLINAL-----IPDI-----------------NLRVG 247

Query: 329 EVSTRSGRGKHTTRHVSLLPLSGGGYLADTPGFNQPSLMKITKQSLAQAFPEIRKILLAS 388
           EVS +  RG+HTTRHV L  L  GG LADTPGFNQP  +  + + L   FPE R+ L   
Sbjct: 248 EVSGKLARGRHTTRHVELFELPNGGLLADTPGFNQPD-VDCSPEELVHYFPEARERLAV- 307

Query: 389 EPAKCSFNDCLHLGEPGCVIKGDWERYQYYFQLLDEIRIREEFQLRTFGTKREGDVRIKV 448
             A C FNDCLH  EP C ++GDWERY++Y + L +  I  + QL       E  +++K 
Sbjct: 308 --ASCRFNDCLHRDEPDCAVRGDWERYEHYLEFLAD-AIARQTQLYQ-QADPESTLKLKT 367

Query: 449 GDMGAQQAEPRLELKKHRRQSRKRVNQSILDELDELE 485
              G  Q EP+LE KK+RR SR+   Q + D   E E
Sbjct: 368 KGKGQSQYEPKLESKKYRRTSRRTQVQGLQDLYQEEE 370

[Close]

BLAST of CaUC08G149580 vs. ExPASy Swiss-Prot
Match: Q8YUA3 (Small ribosomal subunit biogenesis GTPase RsgA 1 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=rsgA1 PE=3 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 4.6e-70
Identity = 166/397 (41.81%), Postives = 224/397 (56.42%), Query Frame = 0


Query: 89  QAIGTVAAAQANFMRV-IVQSLPSQLSARPNDDSELSGSLEGESPESSRLGVELLCVVKA 148
           Q +GTV A QANF +V + Q +  Q S    ++  L   L    P S      LLC  + 
Sbjct: 8   QLLGTVVAVQANFYKVQLDQEVREQGSRGAGEEVHLDSPLP-LCPLSL-----LLCTRRT 67

Query: 149 VLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVFQRSSEILDPPVANVDHLLVLFSMDQPK 208
            LKKI ++V+VGD+VVV   DW   RG I +V  R +++  PP+AN D +L++F++  P 
Sbjct: 68  RLKKIGQQVMVGDRVVVEEPDWAGGRGAIADVLSRQTQLDRPPIANADQILLVFAVADPP 127

Query: 209 LEPFTLTRFLVEAESTGIPLTLGLNKLELVDEETLVSWKSRLRSWGYDPIFCSVQTRTGL 268
           LEP+ L+RFLV+AE+TG+ + L LNK +LV  E       RL +WGY P+F SV+ +  +
Sbjct: 128 LEPYQLSRFLVKAETTGLDVVLCLNKSDLVSPEIQQQISDRLLAWGYQPLFISVENQINI 187

Query: 269 DSLAYILRDQTTVIVGPSGVGKSSLINALRNKNHAADVVDGDNWFDPILGSKWFEDQRVA 328
           D +A  L ++ TV+ GPSGVGKSSLINAL         +   N              RV 
Sbjct: 188 DQIAKYLSNKITVVAGPSGVGKSSLINAL---------IPNIN-------------LRVG 247

Query: 329 EVSTRSGRGKHTTRHVSLLPLSGGGYLADTPGFNQPSLMKITKQSLAQAFPEIRKILLAS 388
           EVS +  RG+HTTRHV L  L  GG LADTPGFNQP  +  + + L   FPE R+ L   
Sbjct: 248 EVSGKLARGRHTTRHVELFELPNGGLLADTPGFNQPD-VDCSPEELVHYFPEARERLAI- 307

Query: 389 EPAKCSFNDCLHLGEPGCVIKGDWERYQYYFQLLDEIRIREEFQLRTFGTKREGDVRIKV 448
             A C FNDC H  EP C ++GDWERY++Y + L +  I  + QL       E  +++K 
Sbjct: 308 --ASCRFNDCSHRDEPDCAVRGDWERYEHYLEFLAD-AIARQTQLYQ-QADPESTLKLKT 367

Query: 449 GDMGAQQAEPRLELKKHRRQSRKRVNQSILDELDELE 485
              G  Q EP+LE KK+RR SR+   Q + D   E E
Sbjct: 368 KGKGQSQYEPKLESKKYRRTSRRTQVQGLQDLYQEEE 370

[Close]

BLAST of CaUC08G149580 vs. ExPASy Swiss-Prot
Match: B0JW21 (Small ribosomal subunit biogenesis GTPase RsgA OS=Microcystis aeruginosa (strain NIES-843) OX=449447 GN=rsgA PE=3 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 1.8e-66
Identity = 151/401 (37.66%), Postives = 227/401 (56.61%), Query Frame = 0


Query: 92  GTVAAAQANFMRVIVQSLPSQLSARPNDDSELSGSLEGESPESSRLGVELLCVVKAVLKK 151
           GTV A QANF +V +                          +S+ +G  LLC  +A L+K
Sbjct: 11  GTVVAVQANFYQVRL--------------------------DSAVMGENLLCTRRARLQK 70

Query: 152 IKRRVLVGDKVVVGSIDWVDRRGMIENVFQRSSEILDPPVANVDHLLVLFSMDQPKLEPF 211
           I + V+VGD+V V   ++ D++G I  V  RS+EI  P VAN++ +L++F++ +P L+P+
Sbjct: 71  IGQSVMVGDRVRVEEANFGDQQGAIAEVLPRSTEIDRPAVANIEQILLVFALAEPVLDPW 130

Query: 212 TLTRFLVEAESTGIPLTLGLNKLELVDEETLVSWKSRLRSWGYDPIFCSVQTRTGLDSLA 271
            ++RFLV+AESTG+ + + +NK++L + E +  W  RL  WGY P F SV+   G ++L 
Sbjct: 131 LISRFLVKAESTGLEIAVCVNKIDLGEPEQIEVWGDRLAGWGYRPFFVSVEKNRGFEALL 190

Query: 272 YILRDQTTVIVGPSGVGKSSLINALRNKNHAADVVDGDNWFDPILGSKWFEDQRVAEVST 331
             L  + T++ GPSGVGKSSLIN L  +                       +QRV +VS 
Sbjct: 191 AQLNHKITLLAGPSGVGKSSLINCLIPE----------------------INQRVGDVSG 250

Query: 332 RSGRGKHTTRHVSLLPLSGGGYLADTPGFNQPSLMKITKQSLAQAFPEIRKILLASEPAK 391
           +  +G+HTTRHV L  L   G LAD+PGFNQP +     + L   FPE+R  L       
Sbjct: 251 KLQKGRHTTRHVQLFALPNRGLLADSPGFNQPDI-NCLPEELTFYFPEVRARLAL---GN 310

Query: 392 CSFNDCLHLGEPGCVIKGDWERYQYYFQLLDEIRIREEFQLRTFGTKREGDVRIKVGDMG 451
           C FNDC H  EP CV++GDWERYQ+Y + L+E   RE+   +T  + +E  +++K+ + G
Sbjct: 311 CQFNDCTHRREPNCVVRGDWERYQHYLEFLEEAIAREQSLQKT--STKESSLKLKIKEAG 351

Query: 452 AQQAEPRLELKKHRRQSRKRVNQSILDELDELEDEDESLEE 493
            +  EP+L  KK+RR SR+  NQ      D+   E+++L++
Sbjct: 371 QETYEPKLANKKYRRPSRRGKNQ------DQERYENKTLQD 351

[Close]

BLAST of CaUC08G149580 vs. ExPASy TrEMBL
Match: A0A0A0KGV4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G365180 PE=3 SV=1)

HSP 1 Score: 914.8 bits (2363), Expect = 1.5e-262
Identity = 467/505 (92.48%), Postives = 483/505 (95.64%), Query Frame = 0


Query: 1   MAIASISMLRHHTTAIAATSSIPVFGNVLRRVFSFRCLSIVAKQHNPNNVSNKPPPSKNL 60
           MAIASISMLRHHT AIAATSSIPVFGNVLRRVF+FRC SIVAKQHNPNNVSNKPPPSKNL
Sbjct: 1   MAIASISMLRHHTAAIAATSSIPVFGNVLRRVFNFRCFSIVAKQHNPNNVSNKPPPSKNL 60

Query: 61  LRAKHTFKDYSSLAPVLSPQDNPPLSESQAIGTVAAAQANFMRVIVQSLPSQLSARPNDD 120
           LRAKHTFKDYSSLAPVLSPQDNPPLSESQAIGTVAAAQANFMRVIVQ+LPSQ S  PNDD
Sbjct: 61  LRAKHTFKDYSSLAPVLSPQDNPPLSESQAIGTVAAAQANFMRVIVQTLPSQFSQSPNDD 120

Query: 121 SELSGSLEGESPESSRLGVELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF 180
            E SGSLE +S +SS LGVELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF
Sbjct: 121 LERSGSLEDDSSKSSMLGVELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF 180

Query: 181 QRSSEILDPPVANVDHLLVLFSMDQPKLEPFTLTRFLVEAESTGIPLTLGLNKLELVDEE 240
           QRSSEILDPPVANVDHLLVLFSMDQP+LEPFTLTRFLVEAESTGIPLTLGLNKLELVDEE
Sbjct: 181 QRSSEILDPPVANVDHLLVLFSMDQPRLEPFTLTRFLVEAESTGIPLTLGLNKLELVDEE 240

Query: 241 TLVSWKSRLRSWGYDPIFCSVQTRTGLDSLAYILRDQTTVIVGPSGVGKSSLINALRNKN 300
           TLVSWKSRLRSWGYDP+FCSVQT  GLDSLA+ILRDQTTVIVGPSGVGKSSLINALRN N
Sbjct: 241 TLVSWKSRLRSWGYDPLFCSVQTGAGLDSLAFILRDQTTVIVGPSGVGKSSLINALRNSN 300

Query: 301 HAADVVDGDNWFDPILGSKWFEDQRVAEVSTRSGRGKHTTRHVSLLPLSGGGYLADTPGF 360
            A D  D DNWFDPILGSKWFE+QRVAEVSTRSGRGKHTTRHVSLLPLSGGGYLADTPGF
Sbjct: 301 RATDASDTDNWFDPILGSKWFEEQRVAEVSTRSGRGKHTTRHVSLLPLSGGGYLADTPGF 360

Query: 361 NQPSLMKITKQSLAQAFPEIRKILLASEPAKCSFNDCLHLGEPGCVIKGDWERYQYYFQL 420
           NQPSLMKITKQSLAQAFPEI+K+L ASEPAKCSFNDCLHLGEPGCVIKGDWERYQYYFQL
Sbjct: 361 NQPSLMKITKQSLAQAFPEIQKMLHASEPAKCSFNDCLHLGEPGCVIKGDWERYQYYFQL 420

Query: 421 LDEIRIREEFQLRTFGTKREGDVRIKVGDMGAQQAEPRLELKKHRRQSRKRVNQSILDEL 480
           LDEIRIREEFQLRTFGTKREGDVRIKVG+MG +QAEPRLELKKHRRQSRKRVNQSILDEL
Sbjct: 421 LDEIRIREEFQLRTFGTKREGDVRIKVGEMGVKQAEPRLELKKHRRQSRKRVNQSILDEL 480

Query: 481 DELEDEDESLEENDPILRAIRNENQ 506
           DELEDED+ LEE +PILRA++NENQ
Sbjct: 481 DELEDEDD-LEETNPILRAMKNENQ 504

[Close]

BLAST of CaUC08G149580 vs. ExPASy TrEMBL
Match: A0A5A7VEI9 (Putative ribosome biogenesis GTPase RsgA 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G00400 PE=3 SV=1)

HSP 1 Score: 908.7 bits (2347), Expect = 1.1e-260
Identity = 463/505 (91.68%), Postives = 479/505 (94.85%), Query Frame = 0


Query: 1   MAIASISMLRHHTTAIAATSSIPVFGNVLRRVFSFRCLSIVAKQHNPNNVSNKPPPSKNL 60
           MAIASISMLRHHT A+AATSS PVFGNV+RRVF FRC SIVAKQHNPNNVSNKPPPSKNL
Sbjct: 1   MAIASISMLRHHTAALAATSSFPVFGNVIRRVFKFRCFSIVAKQHNPNNVSNKPPPSKNL 60

Query: 61  LRAKHTFKDYSSLAPVLSPQDNPPLSESQAIGTVAAAQANFMRVIVQSLPSQLSARPNDD 120
           LRAKHTFKDYSSLAPVLSPQDNPPLSESQAIGTVAAAQANFMRVIVQ+LPSQ S   NDD
Sbjct: 61  LRAKHTFKDYSSLAPVLSPQDNPPLSESQAIGTVAAAQANFMRVIVQTLPSQFSESSNDD 120

Query: 121 SELSGSLEGESPESSRLGVELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF 180
            E SGSLE +S ESS LGVELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF
Sbjct: 121 LERSGSLENDSSESSMLGVELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF 180

Query: 181 QRSSEILDPPVANVDHLLVLFSMDQPKLEPFTLTRFLVEAESTGIPLTLGLNKLELVDEE 240
           QR SEILDPPVANVDHLLVLFSMDQP+LEPFTLTRFLVEAESTGIPLTLGLNKLELVDEE
Sbjct: 181 QRKSEILDPPVANVDHLLVLFSMDQPRLEPFTLTRFLVEAESTGIPLTLGLNKLELVDEE 240

Query: 241 TLVSWKSRLRSWGYDPIFCSVQTRTGLDSLAYILRDQTTVIVGPSGVGKSSLINALRNKN 300
           T+VSWKSRLRSWGYDP+FCSVQT TGLD+LAYILRDQTTVIVGPSGVGKSSLINALRN N
Sbjct: 241 TVVSWKSRLRSWGYDPLFCSVQTGTGLDTLAYILRDQTTVIVGPSGVGKSSLINALRNNN 300

Query: 301 HAADVVDGDNWFDPILGSKWFEDQRVAEVSTRSGRGKHTTRHVSLLPLSGGGYLADTPGF 360
            AAD +D DNWFDPILGSKWFEDQRVAEVSTRSGRGKHTTRHVSLLPL+GGGYLADTPGF
Sbjct: 301 RAADALDTDNWFDPILGSKWFEDQRVAEVSTRSGRGKHTTRHVSLLPLTGGGYLADTPGF 360

Query: 361 NQPSLMKITKQSLAQAFPEIRKILLASEPAKCSFNDCLHLGEPGCVIKGDWERYQYYFQL 420
           NQPSLMKITKQSLAQAFPEI+K+L ASEPAKCSFNDCLHLGEPGC+IKGDWERYQYYFQL
Sbjct: 361 NQPSLMKITKQSLAQAFPEIQKMLRASEPAKCSFNDCLHLGEPGCIIKGDWERYQYYFQL 420

Query: 421 LDEIRIREEFQLRTFGTKREGDVRIKVGDMGAQQAEPRLELKKHRRQSRKRVNQSILDEL 480
           LDEIRIREEFQLRTFGTKREGDVRIKVG MGAQQAEPRLELKKHRRQSRKRVNQSILDEL
Sbjct: 421 LDEIRIREEFQLRTFGTKREGDVRIKVGVMGAQQAEPRLELKKHRRQSRKRVNQSILDEL 480

Query: 481 DELEDEDESLEENDPILRAIRNENQ 506
           DE ED+   LEE DPILRA++NENQ
Sbjct: 481 DEDEDD---LEETDPILRAMKNENQ 502

[Close]

BLAST of CaUC08G149580 vs. ExPASy TrEMBL
Match: A0A6J1BS55 (small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial isoform X2 OS=Momordica charantia OX=3673 GN=LOC111005203 PE=3 SV=1)

HSP 1 Score: 908.7 bits (2347), Expect = 1.1e-260
Identity = 464/507 (91.52%), Postives = 483/507 (95.27%), Query Frame = 0


Query: 1   MAIASISMLRHHTTAIAATSSIPVFGNVLRRVFSFRCLSIVAKQHNPNNVSNKPPPSKNL 60
           MAIASISMLRHHT   AAT+SIP FGNVLRR F+ RC S+VAKQHNPNNVSNKPPPSKNL
Sbjct: 1   MAIASISMLRHHTA--AATASIPAFGNVLRRFFNVRCFSVVAKQHNPNNVSNKPPPSKNL 60

Query: 61  LRAKHTFKDYSSLAPVLSPQDNPPLSESQAIGTVAAAQANFMRVIVQSLPSQLSARPNDD 120
           LRAKHTFKDYSSLAP LSPQDNPPLSESQAIGTVAAAQANFMRVIVQSLPSQLS   N D
Sbjct: 61  LRAKHTFKDYSSLAPALSPQDNPPLSESQAIGTVAAAQANFMRVIVQSLPSQLSDSSNQD 120

Query: 121 SELSGSLEGESPESSRLGVELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF 180
           SE SGSLEG+S ESSRLGVELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF
Sbjct: 121 SEPSGSLEGDSSESSRLGVELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF 180

Query: 181 QRSSEILDPPVANVDHLLVLFSMDQPKLEPFTLTRFLVEAESTGIPLTLGLNKLELVDEE 240
           QRSSEILDPPVANVDHLLVLFSMDQPKLE FTLTRFL+EAESTGIPLTLGLNKLELVDEE
Sbjct: 181 QRSSEILDPPVANVDHLLVLFSMDQPKLESFTLTRFLIEAESTGIPLTLGLNKLELVDEE 240

Query: 241 TLVSWKSRLRSWGYDPIFCSVQTRTGLDSLAYILRDQTTVIVGPSGVGKSSLINALRNKN 300
           TLVSWKSRLRSWGY+P+FCSVQT+TGLDSLAYILRDQTTVIVGPSGVGKSSLINALRN +
Sbjct: 241 TLVSWKSRLRSWGYEPLFCSVQTKTGLDSLAYILRDQTTVIVGPSGVGKSSLINALRNND 300

Query: 301 HAADVVDGDNWFDPILGSKWFEDQRVAEVSTRSGRGKHTTRHVSLLPLSGGGYLADTPGF 360
              D V+GDNWFDPILGSKWFEDQRVAEVSTRSGRGKHTTRHVSLLPLSGGGYLADTPGF
Sbjct: 301 RGVDAVEGDNWFDPILGSKWFEDQRVAEVSTRSGRGKHTTRHVSLLPLSGGGYLADTPGF 360

Query: 361 NQPSLMKITKQSLAQAFPEIRKILLASEPAKCSFNDCLHLGEPGCVIKGDWERYQYYFQL 420
           NQPSLMKITKQSLAQAFPEI+K+LLA+EPA+CSFNDCLHLGEPGCVIKGDWERYQYYFQL
Sbjct: 361 NQPSLMKITKQSLAQAFPEIQKMLLANEPARCSFNDCLHLGEPGCVIKGDWERYQYYFQL 420

Query: 421 LDEIRIREEFQLRTFGTKREGDVRIKVGDMGAQQAEPRLELKKHRRQSRKRVNQSILDEL 480
           LDEIRIREEFQLRTFGTKREGDVRIKVGDMGAQQAEPRLELKKHRRQSRKRVNQSIL+EL
Sbjct: 421 LDEIRIREEFQLRTFGTKREGDVRIKVGDMGAQQAEPRLELKKHRRQSRKRVNQSILNEL 480

Query: 481 DELEDEDE--SLEENDPILRAIRNENQ 506
           DELEDEDE  SL++ DPIL+A+RNE Q
Sbjct: 481 DELEDEDEDDSLDKEDPILKAMRNEQQ 505

[Close]

BLAST of CaUC08G149580 vs. ExPASy TrEMBL
Match: A0A6J1KPK6 (small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111496452 PE=3 SV=1)

HSP 1 Score: 906.7 bits (2342), Expect = 4.2e-260
Identity = 462/505 (91.49%), Postives = 483/505 (95.64%), Query Frame = 0


Query: 1   MAIASISMLRHHTTAIAATSSIPVFGNVLRRVFSFRCLSIVAKQHNPNNVSNKPPPSKNL 60
           MAIASISMLRHH+T+IAA +S+P FGNVLRR F+ RCLS+VAKQHNPNNVSNKPPPSKNL
Sbjct: 1   MAIASISMLRHHSTSIAAIASVPAFGNVLRRCFNVRCLSVVAKQHNPNNVSNKPPPSKNL 60

Query: 61  LRAKHTFKDYSSLAPVLSPQDNPPLSESQAIGTVAAAQANFMRVIVQSLPSQLSARPNDD 120
           LRAKHTFK+YSSLAPVLSPQD PPLSESQAIGTVAAAQANFMRVIVQSLPS+LS   N+D
Sbjct: 61  LRAKHTFKNYSSLAPVLSPQDIPPLSESQAIGTVAAAQANFMRVIVQSLPSRLSVSSNND 120

Query: 121 SELSGSLEGESPESSRLGVELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF 180
           SELSGS EG+S +SSRLG+ELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF
Sbjct: 121 SELSGSSEGDSSDSSRLGIELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF 180

Query: 181 QRSSEILDPPVANVDHLLVLFSMDQPKLEPFTLTRFLVEAESTGIPLTLGLNKLELVDEE 240
           QRSSEILDPPVANVDHLLVLFS+DQPKLEPFTLTRFLVEAESTGIPLTLGLNKLELVDEE
Sbjct: 181 QRSSEILDPPVANVDHLLVLFSIDQPKLEPFTLTRFLVEAESTGIPLTLGLNKLELVDEE 240

Query: 241 TLVSWKSRLRSWGYDPIFCSVQTRTGLDSLAYILRDQTTVIVGPSGVGKSSLINALRNKN 300
           T+VSWKSRLRSWGYDP+FCSVQTR GLDSLAYILRDQTTVIVGPSGVGKSSLINALR+ N
Sbjct: 241 TVVSWKSRLRSWGYDPLFCSVQTRIGLDSLAYILRDQTTVIVGPSGVGKSSLINALRSNN 300

Query: 301 HAADVVDGDNWFDPILGSKWFEDQRVAEVSTRSGRGKHTTRHVSLLPLSGGGYLADTPGF 360
            AAD V+GDNWFDPI  SKWFEDQRVAEVSTRSGRGKHTTRHVSLLPL GGGYLADTPGF
Sbjct: 301 RAADAVEGDNWFDPIRDSKWFEDQRVAEVSTRSGRGKHTTRHVSLLPLMGGGYLADTPGF 360

Query: 361 NQPSLMKITKQSLAQAFPEIRKILLASEPAKCSFNDCLHLGEPGCVIKGDWERYQYYFQL 420
           NQPSLMKITKQSLAQAFPEIR  LLASEPAKCSFNDCLHLGEPGCVI GDWERYQYYFQL
Sbjct: 361 NQPSLMKITKQSLAQAFPEIRNKLLASEPAKCSFNDCLHLGEPGCVINGDWERYQYYFQL 420

Query: 421 LDEIRIREEFQLRTFGTKREGDVRIKVGDMGAQQAEPRLELKKHRRQSRKRVNQSILDEL 480
           LDEIRIREEFQLRTFGTKREGDVRIKVGDMGAQQAEPRLELKKHRRQSRKRVNQSIL+EL
Sbjct: 421 LDEIRIREEFQLRTFGTKREGDVRIKVGDMGAQQAEPRLELKKHRRQSRKRVNQSILNEL 480

Query: 481 DELEDE-DESLEENDPILRAIRNEN 505
           DELEDE D+S EE+DPILRA+RNEN
Sbjct: 481 DELEDEDDDSSEEDDPILRAMRNEN 505

[Close]

BLAST of CaUC08G149580 vs. ExPASy TrEMBL
Match: A0A6J1GIJ0 (small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111454543 PE=3 SV=1)

HSP 1 Score: 906.7 bits (2342), Expect = 4.2e-260
Identity = 464/506 (91.70%), Postives = 485/506 (95.85%), Query Frame = 0


Query: 1   MAIASISMLRHHTTAIAATSSIPVFGNVLRRVFSFRCLSIVAKQHNPNNVSNKPPPSKNL 60
           MAIASISMLRHH+T+IAA +S+P FGNVLRR F+ RCLSIVAKQHNPNNVSNKPPPSKNL
Sbjct: 1   MAIASISMLRHHSTSIAAIASVPGFGNVLRRCFNVRCLSIVAKQHNPNNVSNKPPPSKNL 60

Query: 61  LRAKHTFKDYSSLAPVLSPQDNPPLSESQAIGTVAAAQANFMRVIVQSLPSQLSARPNDD 120
           LRAKHTFK+YSSLAPVLSPQD PPLSESQAIGTVAAAQANFMRVIVQSLPSQLS   N+D
Sbjct: 61  LRAKHTFKNYSSLAPVLSPQDIPPLSESQAIGTVAAAQANFMRVIVQSLPSQLSDSSNND 120

Query: 121 SELSGSLEGESPESSRLGVELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF 180
           SE SGSLEG+S +SSRLG+ELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF
Sbjct: 121 SERSGSLEGDSLDSSRLGIELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVF 180

Query: 181 QRSSEILDPPVANVDHLLVLFSMDQPKLEPFTLTRFLVEAESTGIPLTLGLNKLELVDEE 240
           QRSSEILDPPVANVDHLLVLFS++QPKLEPFTLTRFLVEAESTGIPLTLGLNKLELVDEE
Sbjct: 181 QRSSEILDPPVANVDHLLVLFSIEQPKLEPFTLTRFLVEAESTGIPLTLGLNKLELVDEE 240

Query: 241 TLVSWKSRLRSWGYDPIFCSVQTRTGLDSLAYILRDQTTVIVGPSGVGKSSLINALRNKN 300
           T+VSWKSRLRSWGYDP+FCSVQTR GLDSLAYILRDQTTVIVGPSGVGKSSLINALR+ N
Sbjct: 241 TVVSWKSRLRSWGYDPLFCSVQTRIGLDSLAYILRDQTTVIVGPSGVGKSSLINALRSNN 300

Query: 301 HAADVVDGDNWFDPILGSKWFEDQRVAEVSTRSGRGKHTTRHVSLLPLSGGGYLADTPGF 360
            AAD V+GDNWFDPI  SKWFEDQRVAEVSTRSGRGKHTTRHVSLLPL GGGYLADTPGF
Sbjct: 301 RAADAVEGDNWFDPIRDSKWFEDQRVAEVSTRSGRGKHTTRHVSLLPLMGGGYLADTPGF 360

Query: 361 NQPSLMKITKQSLAQAFPEIRKILLASEPAKCSFNDCLHLGEPGCVIKGDWERYQYYFQL 420
           NQPSLMKITKQSLAQAFPEIR  LLASEPAKCSFNDCLHLGEPGCVI GDWERYQYYFQL
Sbjct: 361 NQPSLMKITKQSLAQAFPEIRNKLLASEPAKCSFNDCLHLGEPGCVINGDWERYQYYFQL 420

Query: 421 LDEIRIREEFQLRTFGTKREGDVRIKVGDMGAQQAEPRLELKKHRRQSRKRVNQSILDEL 480
           LDEIRIREEFQLRTFGTKREGDVRIKVGDMGAQQAEPRLELKKHRRQSRKRVNQSIL+EL
Sbjct: 421 LDEIRIREEFQLRTFGTKREGDVRIKVGDMGAQQAEPRLELKKHRRQSRKRVNQSILNEL 480

Query: 481 DELEDE-DESLEENDPILRAIRNENQ 506
           DELEDE D+SLEE+DPILRA+RNEN+
Sbjct: 481 DELEDEDDDSLEEDDPILRAMRNENK 506

[Close]

BLAST of CaUC08G149580 vs. TAIR 10
Match: AT1G67440.1 (Minichromosome maintenance (MCM2/3/5) family protein )

HSP 1 Score: 629.4 bits (1622), Expect = 2.5e-180
Identity = 322/448 (71.88%), Postives = 373/448 (83.26%), Query Frame = 0


Query: 60  LLRAKHTFKDY-SSLAPVLSPQDNPPLSESQAIGTVAAAQANFMRVIVQSLPSQLSARPN 119
           +LRAKH  K+Y SSL+PVLSP+  P L ESQAIGTVA AQANFMRVIVQ + + +++  +
Sbjct: 1   MLRAKHIGKNYSSSLSPVLSPEHKPSLLESQAIGTVATAQANFMRVIVQDVANSVTS--D 60

Query: 120 DDSELSGSLEGESPESSRLGVELLCVVKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIEN 179
           DD+           +SS+ GVELLCVV+AVLKKI+RRVLVGDKV+VGSIDWVDRRGMIEN
Sbjct: 61  DDN-----------DSSKTGVELLCVVRAVLKKIRRRVLVGDKVLVGSIDWVDRRGMIEN 120

Query: 180 VFQRSSEILDPPVANVDHLLVLFSMDQPKLEPFTLTRFLVEAESTGIPLTLGLNKLELVD 239
           VF R SEILDPPVANVDHLLVLFS+DQPKLEPFTLTRFLVEAEST IPLTL LNK EL+ 
Sbjct: 121 VFHRRSEILDPPVANVDHLLVLFSLDQPKLEPFTLTRFLVEAESTRIPLTLALNKTELIS 180

Query: 240 EETLVSWKSRLRSWGYDPIFCSVQTRTGLDSLAYILRDQTTVIVGPSGVGKSSLINALRN 299
           EE L +WK RLR W Y+P+FCSV T+ GLD +A++LRDQT+VIVGPSGVGKSSLIN LR+
Sbjct: 181 EEELETWKIRLRGWNYEPLFCSVGTKDGLDDIAFVLRDQTSVIVGPSGVGKSSLINVLRS 240

Query: 300 KNHAADVVDGDNWFDPILGSKWFEDQRVAEVSTRSGRGKHTTRHVSLLPLSGGGYLADTP 359
            NH   VV+ +NWF+P+LG+KWF+DQRV EVS+RSGRGKHTTR+VSLLP+S GGYLADTP
Sbjct: 241 -NHGGGVVEDENWFEPMLGNKWFDDQRVGEVSSRSGRGKHTTRNVSLLPVSEGGYLADTP 300

Query: 360 GFNQPSLMKITKQSLAQAFPEIRKILLASEPAKCSFNDCLHLGEPGCVIKGDWERYQYYF 419
           GFNQPSL+K+TK SLA  FPEIR ++   E  KC F DCLH+GEPGCV+KGDWERY YY 
Sbjct: 301 GFNQPSLLKVTKHSLAHCFPEIRNMI---ESEKCGFRDCLHIGEPGCVVKGDWERYPYYL 360

Query: 420 QLLDEIRIREEFQLRTFGTKREGDVRIKVGDMGAQQAEPRLELKKHRRQSRKRVNQSILD 479
           QLLDEIRIREEFQLRTFGTKRE DVR KVGDMG + AEPRL  KKHRR+SRK+  Q+++ 
Sbjct: 361 QLLDEIRIREEFQLRTFGTKREDDVRYKVGDMGVKHAEPRLMPKKHRRESRKKTKQTMIS 420

Query: 480 ELDELEDEDESLE-ENDPILRAIRNENQ 506
           ELDE EDED  L  ENDPI++AI NEN+
Sbjct: 421 ELDEFEDEDSDLYIENDPIVQAIENENK 431

[Close]

BLAST of CaUC08G149580 vs. TAIR 10
Match: AT1G67460.1 (Minichromosome maintenance (MCM2/3/5) family protein )

HSP 1 Score: 287.3 bits (734), Expect = 2.3e-77
Identity = 158/274 (57.66%), Postives = 195/274 (71.17%), Query Frame = 0


Query: 25  FGNVLRRVFSFRCLSIVAKQHNPNNVSNKPPPSKNLLRAKHTFKDYSSLAPVLSPQDNPP 84
           FG  LR   SF  LS + +Q NP NV+  P P+K +LR        S LAPVL   + P 
Sbjct: 24  FGTGLRIRRSFYFLSAI-RQENP-NVTKNPHPNKTILR--------SFLAPVLPLDEKPN 83

Query: 85  LSESQAIGTVAAAQANFMRVIVQSLPSQLSARPNDDSELSGSLEGESPESSRLGVELLCV 144
           L E QAIGT+A A A++MRVIVQ +P                 E ++ E  ++GVELLCV
Sbjct: 84  LVELQAIGTIATALADYMRVIVQDVP-----------------ESDNGEDDKIGVELLCV 143

Query: 145 VKAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVFQRSSEILDPPVANVDHLLVLFSMD 204
           V+ +LKKI R VLVGDKV+V  +DWVDRR  I NVF R SE+LDPPVANVDHL++LFS+D
Sbjct: 144 VRKLLKKIGRTVLVGDKVLVDKVDWVDRRAKIINVFDRVSEVLDPPVANVDHLVILFSLD 203

Query: 205 QPKLEPFTLTRFLVEAESTGIPLTLGLNKLELVDEETLVSWKSRLRSWGYDPIFCSVQTR 264
           QPK++PFTLTRFLVEAES GI +T+ LNK ELV +E + SWK RLRSW Y+P+FCSV T+
Sbjct: 204 QPKIDPFTLTRFLVEAESIGIRITVALNKCELVTQEEVESWKIRLRSWNYEPLFCSVGTK 263

Query: 265 TGLDSLAYILRDQTTVIVGPSGVGKSSLINALRN 299
            G+D +A+ LR+QT+VIVGPSGVGKSSLIN LR+
Sbjct: 264 VGIDEIAFNLRNQTSVIVGPSGVGKSSLINILRS 270

The following BLAST results are available for this feature:

BLAST of CaUC08G149580 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038885175.1	1.7e-263	93.98	small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial [Benincasa hispi...	[more]
XP_004144195.1	3.2e-262	92.48	small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial [Cucumis sativus...	[more]
XP_022132325.1	2.3e-260	91.52	small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial isoform X2 [Momo...	[more]
KAA0064736.1	2.3e-260	91.68	putative ribosome biogenesis GTPase RsgA 1 [Cucumis melo var. makuwa]	[more]
XP_023536955.1	3.9e-260	91.50	small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial [Cucurbita pepo ...	[more]

BLAST of CaUC08G149580 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q4V399	3.5e-179	71.88	Small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial OS=Arabidopsis t...	[more]
F4HTL8	3.3e-76	57.66	Small ribosomal subunit biogenesis GTPase RsgA 2, mitochondrial OS=Arabidopsis t...	[more]
Q3MG79	1.6e-70	41.56	Small ribosomal subunit biogenesis GTPase RsgA OS=Trichormus variabilis (strain ...	[more]
Q8YUA3	4.6e-70	41.81	Small ribosomal subunit biogenesis GTPase RsgA 1 OS=Nostoc sp. (strain PCC 7120 ...	[more]
B0JW21	1.8e-66	37.66	Small ribosomal subunit biogenesis GTPase RsgA OS=Microcystis aeruginosa (strain...	[more]

BLAST of CaUC08G149580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KGV4	1.5e-262	92.48	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G365180 PE=3 SV=1	[more]
A0A5A7VEI9	1.1e-260	91.68	Putative ribosome biogenesis GTPase RsgA 1 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A6J1BS55	1.1e-260	91.52	small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial isoform X2 OS=Mo...	[more]
A0A6J1KPK6	4.2e-260	91.49	small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial OS=Cucurbita max...	[more]
A0A6J1GIJ0	4.2e-260	91.70	small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial-like OS=Cucurbit...	[more]

BLAST of CaUC08G149580 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G67440.1	2.5e-180	71.88	Minichromosome maintenance (MCM2/3/5) family protein	[more]
AT1G67460.1	2.3e-77	57.66	Minichromosome maintenance (MCM2/3/5) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 466..493
None	No IPR available	GENE3D	1.10.40.50	Probable gtpase engc; domain 3	coord: 367..429 e-value: 7.7E-14 score: 53.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 112..131
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 112..133
None	No IPR available	PANTHER	PTHR32120:SF11	SMALL RIBOSOMAL SUBUNIT BIOGENESIS GTPASE RSGA 1, MITOCHONDRIAL-RELATED	coord: 79..487
IPR004881	Ribosome biogenesis GTPase RsgA	TIGRFAM	TIGR00157	TIGR00157	coord: 156..301 e-value: 9.7E-35 score: 118.2
IPR004881	Ribosome biogenesis GTPase RsgA	PANTHER	PTHR32120	SMALL RIBOSOMAL SUBUNIT BIOGENESIS GTPASE RSGA	coord: 79..487
IPR004881	Ribosome biogenesis GTPase RsgA	HAMAP	MF_01820	GTPase_RsgA	coord: 90..428 score: 29.749889
IPR004881	Ribosome biogenesis GTPase RsgA	CDD	cd01854	YjeQ_EngC	coord: 192..422 e-value: 1.03761E-82 score: 253.474
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 178..365 e-value: 6.2E-49 score: 167.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 186..427
IPR010914	RsgA GTPase domain	PFAM	PF03193	RsgA_GTPase	coord: 179..365 e-value: 4.9E-57 score: 192.5
IPR010914	RsgA GTPase domain	PROSITE	PS50936	ENGC_GTPASE	coord: 192..361 score: 40.672272
IPR030378	Circularly permuted (CP)-type guanine nucleotide-binding (G) domain	PROSITE	PS51721	G_CP	coord: 183..363 score: 50.11248
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 94..182

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC08G149580.1	CaUC08G149580.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding