CaUC08G148960 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC08G148960
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionPentatricopeptide repeat-containing protein
LocationCiama_Chr08: 20378098 .. 20381985 (-)
RNA-Seq ExpressionCaUC08G148960
SyntenyCaUC08G148960
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTGTCAATCTGTTTCCGAGTTCTCGACTTACTTTGCCGGCGGCAGGAATAATTGAGCCTTCATTGCTATTGCCTTGTGGTGCCGCCGCAGCCATTACGACTTTCCCGATTACCCAATTCAATTATCCGATAACATGCTTCTTCTTTCACCGTTGCCACTCTCCACTCACTTTCCCGCAACTCAATTCCCTTCTCTCACCGTCTTCCTCCACCACCAGAACCCCCATTTAACAACCCATCTCTCATTTCCCTTCATCTCCGCCGCCACCGCTACCACCTCCTCCTCCCTCGTCACCTGTTACACTTCCTCCGACGCCCTCGACCTCGACCTCGACGTTTTCGAAAACGACCCCGTTTTCCTTCAGAGTCGCCGCTACGACTTCACTCCTCTCCTCGACTTCCTTACTCGGTCTTCGGCCTATCCCAAGTCCGATTCGGAGGTGGAATTTAACTCTACTTTGAACTCCGGTTCTGACTCCGATACCGCTTCTCCGACCTCCCTCGACCCCACCGAGTTCCAGCTTGCCGAGGCCTACAGGGCCGTGCCGGCGCCTCTTTGGCACTCTCTGCTTAAGTCTCTTTGCTCTTCCTCCTCTTCGATTGGGCTAGGTTATGCGGTGGTCTCGTGGCTTCAGAAGCATAATCTGTGTTTCTCTTACGAATTGCTTTACTCGATTCTCATTCATGCACTTGGCCGCTCTGAGAAGCTCTATGAAGCTTTTATTCTCTCCCAGAAGCAAACCCTAACCCCTTTAACGTATAATGCTCTCATTGGTGCTTGTGCTCGCAATAATGATTTGGAAAAGGCTCTAAATTTGATGTCTAGGATGCGACAGGATGGTTACCAATCTGATTTTGTTAACTATAGTTTGATAATTCAGTCGCTTACTCGCACGAATAAGATTGATGTCCCAATCTTGCAAAAGCTTTACGAAGAGATTGAGTCTGATAAAATTGAACTCGATGGGCAGCTCCTTAATGATATCATATTGGGCTTTGCGAAAGCTGGAGATCCTAACCGAGCTCTGTATTTCTTGTCGATGGTACAGGCGAGTGGTTTAAACCCCAAAACTTCTACGTTTGTTGCGATCATTTCGGCATTGGGAAATCATGGGCGGACAGAGGAAGCTGAGGCTATATTTGAGGAAATGAAAGAAGGTGGATTGAAACCAAGAATTAAGGCTTTCAATGCACTTCTTAAAGGTTATGCTAGAAAGGGTTCTCTGAAAGAAGCAGAATCTATTGTTTCAGAGATGGAAAAGAGTGGATTATCACCGGATGAGCACACATATGGTCTTCTCGTTGATGCTTATGCAAATGTGGGCAGATGGGAAAGTGCAAGACATCTTTTGAAACAAATGGAAGCTAGAAATGTACAGCCCAACTCCTTTATTTTCAGTAGGATTTTAGCTAGTTATCGAGACCGTGGCGAATGGCAGAAAACATTTGAAGTTTTGAGGGAAATGAAGAATAGCAATGTCAAACCTGATAGGCATTTTTACAATGTTATGATCGATACTTTTGGGAAATTCAATTGTCTTGATCATGCCATGGAAACATATGACCGGATGCTCTCGGAGGGGATTGAACCAGATGTTGTTACTTGGAACACACTTATAGACTGTCATTGTAAGCACGGATACCATGACAGGGCTGCAGAATTGTTCGAGGAAATGCAGGAGCGTGGTTATTTACCTTGTCCCACAACATATAATATTATGATCAATTCGTTAGGAGAGCAGGAAAAGTGGGACGAGGTTAAAATCTTGTTAGGAAAGATGCAGAGTCAGGGCTTACTTCCCAATGTGATAACATACACTACACTTGTTGATATATATGGACAGTCGGGGAGGTTTAACGATGCAATTGAGTGCTTGGAGGCCATGAAGTCTGCTGGGCTGAAACCATCCTCAACTATGTATAATGCTTTAATCAATGCCTTTGCTCAAAGAGTACGTTATCTTTCCCGCATTTCTTCTCACACATTTTTTGATATAAATATGATTCTCTGAAAAATTGATAATGCAAATTTCTAATTCCAATAAAAGGATACTTACTGTTGGAACATATCCCATGTATGGATATGTTACTTGTTCATACATTTTTCTCCACAGCTGATGTTGTATTACAAATGGAAGGAAAATTTTAGAACAAAATAATATTATACATAATATCATTGCTTAACAACATAACACTGCCAATCATCAGATACTCAATGCGAAGTTGAGAAAATTGATACCAAAGTACTGGAATATTGTAGGTTTCTTGTTTTGGTTTCCATTCGTGCTTCTCATCTTGATAAACAGATTGAATTTGTAATCAGAATGCTTAGTAAATATGACTCCTTGTAAATAGCAGTAATATTTTACAGAAGTAGCATTGTATGCGCTTTCTTAATTAACTCAGCATGCGTGCTAATGATTTTTTACTTTTGTAGTTTTTTAAAAGGTTCGCTATATTTCTTCTGTTTTGTAATTGGCTGTAGTTATTGGCAGCAGAAGCAGGTTCACCATCCGATTTGGAGCCTATGGTTCTGAGTAATATGTTTATATAAAAAAGCCCACCTGTCATTGGGCCATCACCAGATTTGCCTCTCTAATCGTAGTTGTAATATAAGTTTATGTATCAGAATATAAGTTTAAATTTGTTTCTTGAATATGCATTTAATGTTCTTCCATTTTATCATTTGGCAGGGTTTGTCAGAGCAGGCAGTAAATGCATATAGAGTTATGAGATCAGATGGATTAAAGCCCAGTCTCTTGGCTCTTAATTCATTGATCAATGCCTTTGGCGAGGATAGGAGAGACATTGAAGCCTTTTCAATCTTGCAGTACATGAAAGAAAATGTAAGTGTAGTGTATTTACAATAACGTTTGCATTTTTCCATTCTCAATATCAAGAATAAAGCTTATTCAGTCATCATCCAAACTTATTTGGTCCTACAACTGCAGGATGTGAAGCCTGATGTTGTCACATATACAACACTTATGAAAGCTTTGATCCGTGTTGACAAATTTGACAAGGTAGAAGAACATGACCCTCCAGCTTGTTTTTCATAATTTGTTCATGTTATTGTATGCATATATTTTGCTTATTTGGCAAATATTACCTCTGATTGTCCATTATATTGGAGCCTACTTAAACGTCTTTTTGAATATAACTATTAACTAGAAAGTACATTATTTGAGTTTCAGGTTCCGGCTGTGTATGAAGAGATGATTTTGTCTGGATGTACTCCTGATGGAAAGGCCAGAGCCATGTTGCGGTCTGCCCTCAGATACATGAAGCGTACTCTAAGCTTATAGTTGCCCGCTCGATCATGTAACCGTGCACCTTGGAGAAAAAATTTGCATGATTTTGTCCAACCAATACATAGGTATGCACTAAAGGCTGTAAGATGTGATGTTTCTGGCCGTTTCATAATGAAATGGTACCAGAACCTGTAGTCTTTTTGGCACTTTCTTAATGAATTGGTATCAAAATCGACAACTTTTGTGGGAATTCATGTGTTGAAATATGAATTAATTTTCATAATTTTATGTACACTGTTTCGTAGACTCACGACTGATGTTTTATATCTCCCCTGGAATGGTTTTGCAGGAATTGCCAACCCAAACTGAATCATATCCTTATGACTTGGAGAAAGGTTTGATGTTACACAAATAGTATGGCATTATACCAGCAAAAAGTAGCATTTCTAAAGTAGAACCCTCAATACTCGCCCCTCCTTTCCGCTCGCTTAAATGACCGCCAGGTGACGGGTCTTAGAAACACCAGGCAAATTCCCATCTGTTGATCATTCTTGTATTATTGTTTATACAACATTCACCATTCTTACATTATACAGTAAAATGCAAAATAAATAATTGATCCAAGGACCTCACTTCA

mRNA sequence

ATTGTCAATCTGTTTCCGAGTTCTCGACTTACTTTGCCGGCGGCAGGAATAATTGAGCCTTCATTGCTATTGCCTTGTGGTGCCGCCGCAGCCATTACGACTTTCCCGATTACCCAATTCAATTATCCGATAACATGCTTCTTCTTTCACCGTTGCCACTCTCCACTCACTTTCCCGCAACTCAATTCCCTTCTCTCACCGTCTTCCTCCACCACCAGAACCCCCATTTAACAACCCATCTCTCATTTCCCTTCATCTCCGCCGCCACCGCTACCACCTCCTCCTCCCTCGTCACCTGTTACACTTCCTCCGACGCCCTCGACCTCGACCTCGACGTTTTCGAAAACGACCCCGTTTTCCTTCAGAGTCGCCGCTACGACTTCACTCCTCTCCTCGACTTCCTTACTCGGTCTTCGGCCTATCCCAAGTCCGATTCGGAGGTGGAATTTAACTCTACTTTGAACTCCGGTTCTGACTCCGATACCGCTTCTCCGACCTCCCTCGACCCCACCGAGTTCCAGCTTGCCGAGGCCTACAGGGCCGTGCCGGCGCCTCTTTGGCACTCTCTGCTTAAGTCTCTTTGCTCTTCCTCCTCTTCGATTGGGCTAGGTTATGCGGTGGTCTCGTGGCTTCAGAAGCATAATCTGTGTTTCTCTTACGAATTGCTTTACTCGATTCTCATTCATGCACTTGGCCGCTCTGAGAAGCTCTATGAAGCTTTTATTCTCTCCCAGAAGCAAACCCTAACCCCTTTAACGTATAATGCTCTCATTGGTGCTTGTGCTCGCAATAATGATTTGGAAAAGGCTCTAAATTTGATGTCTAGGATGCGACAGGATGGTTACCAATCTGATTTTGTTAACTATAGTTTGATAATTCAGTCGCTTACTCGCACGAATAAGATTGATGTCCCAATCTTGCAAAAGCTTTACGAAGAGATTGAGTCTGATAAAATTGAACTCGATGGGCAGCTCCTTAATGATATCATATTGGGCTTTGCGAAAGCTGGAGATCCTAACCGAGCTCTGTATTTCTTGTCGATGGTACAGGCGAGTGGTTTAAACCCCAAAACTTCTACGTTTGTTGCGATCATTTCGGCATTGGGAAATCATGGGCGGACAGAGGAAGCTGAGGCTATATTTGAGGAAATGAAAGAAGGTGGATTGAAACCAAGAATTAAGGCTTTCAATGCACTTCTTAAAGGTTATGCTAGAAAGGGTTCTCTGAAAGAAGCAGAATCTATTGTTTCAGAGATGGAAAAGAGTGGATTATCACCGGATGAGCACACATATGGTCTTCTCGTTGATGCTTATGCAAATGTGGGCAGATGGGAAAGTGCAAGACATCTTTTGAAACAAATGGAAGCTAGAAATGTACAGCCCAACTCCTTTATTTTCAGTAGGATTTTAGCTAGTTATCGAGACCGTGGCGAATGGCAGAAAACATTTGAAGTTTTGAGGGAAATGAAGAATAGCAATGTCAAACCTGATAGGCATTTTTACAATGTTATGATCGATACTTTTGGGAAATTCAATTGTCTTGATCATGCCATGGAAACATATGACCGGATGCTCTCGGAGGGGATTGAACCAGATGTTGTTACTTGGAACACACTTATAGACTGTCATTGTAAGCACGGATACCATGACAGGGCTGCAGAATTGTTCGAGGAAATGCAGGAGCGTGGTTATTTACCTTGTCCCACAACATATAATATTATGATCAATTCGTTAGGAGAGCAGGAAAAGTGGGACGAGGTTAAAATCTTGTTAGGAAAGATGCAGAGTCAGGGCTTACTTCCCAATGTGATAACATACACTACACTTGTTGATATATATGGACAGTCGGGGAGGTTTAACGATGCAATTGAGTGCTTGGAGGCCATGAAGTCTGCTGGGCTGAAACCATCCTCAACTATGTATAATGCTTTAATCAATGCCTTTGCTCAAAGATTATTGGCAGCAGAAGCAGGTTCACCATCCGATTTGGAGCCTATGGGTTTGTCAGAGCAGGCAGTAAATGCATATAGAGTTATGAGATCAGATGGATTAAAGCCCAGTCTCTTGGCTCTTAATTCATTGATCAATGCCTTTGGCGAGGATAGGAGAGACATTGAAGCCTTTTCAATCTTGCAGTACATGAAAGAAAATGATGTGAAGCCTGATGTTGTCACATATACAACACTTATGAAAGCTTTGATCCGTGTTGACAAATTTGACAAGGTTCCGGCTGTGTATGAAGAGATGATTTTGTCTGGATGTACTCCTGATGGAAAGGCCAGAGCCATGTTGCGGTCTGCCCTCAGATACATGAAGCGTACTCTAAGCTTATAGTTGCCCGCTCGATCATGTAACCGTGCACCTTGGAGAAAAAATTTGCATGATTTTGTCCAACCAATACATAGGAATTGCCAACCCAAACTGAATCATATCCTTATGACTTGGAGAAAGGTTTGATGTTACACAAATAGTATGGCATTATACCAGCAAAAAGTAGCATTTCTAAAGTAGAACCCTCAATACTCGCCCCTCCTTTCCGCTCGCTTAAATGACCGCCAGGTGACGGGTCTTAGAAACACCAGGCAAATTCCCATCTGTTGATCATTCTTGTATTATTGTTTATACAACATTCACCATTCTTACATTATACAGTAAAATGCAAAATAAATAATTGATCCAAGGACCTCACTTCA

Coding sequence (CDS)

ATGCTTCTTCTTTCACCGTTGCCACTCTCCACTCACTTTCCCGCAACTCAATTCCCTTCTCTCACCGTCTTCCTCCACCACCAGAACCCCCATTTAACAACCCATCTCTCATTTCCCTTCATCTCCGCCGCCACCGCTACCACCTCCTCCTCCCTCGTCACCTGTTACACTTCCTCCGACGCCCTCGACCTCGACCTCGACGTTTTCGAAAACGACCCCGTTTTCCTTCAGAGTCGCCGCTACGACTTCACTCCTCTCCTCGACTTCCTTACTCGGTCTTCGGCCTATCCCAAGTCCGATTCGGAGGTGGAATTTAACTCTACTTTGAACTCCGGTTCTGACTCCGATACCGCTTCTCCGACCTCCCTCGACCCCACCGAGTTCCAGCTTGCCGAGGCCTACAGGGCCGTGCCGGCGCCTCTTTGGCACTCTCTGCTTAAGTCTCTTTGCTCTTCCTCCTCTTCGATTGGGCTAGGTTATGCGGTGGTCTCGTGGCTTCAGAAGCATAATCTGTGTTTCTCTTACGAATTGCTTTACTCGATTCTCATTCATGCACTTGGCCGCTCTGAGAAGCTCTATGAAGCTTTTATTCTCTCCCAGAAGCAAACCCTAACCCCTTTAACGTATAATGCTCTCATTGGTGCTTGTGCTCGCAATAATGATTTGGAAAAGGCTCTAAATTTGATGTCTAGGATGCGACAGGATGGTTACCAATCTGATTTTGTTAACTATAGTTTGATAATTCAGTCGCTTACTCGCACGAATAAGATTGATGTCCCAATCTTGCAAAAGCTTTACGAAGAGATTGAGTCTGATAAAATTGAACTCGATGGGCAGCTCCTTAATGATATCATATTGGGCTTTGCGAAAGCTGGAGATCCTAACCGAGCTCTGTATTTCTTGTCGATGGTACAGGCGAGTGGTTTAAACCCCAAAACTTCTACGTTTGTTGCGATCATTTCGGCATTGGGAAATCATGGGCGGACAGAGGAAGCTGAGGCTATATTTGAGGAAATGAAAGAAGGTGGATTGAAACCAAGAATTAAGGCTTTCAATGCACTTCTTAAAGGTTATGCTAGAAAGGGTTCTCTGAAAGAAGCAGAATCTATTGTTTCAGAGATGGAAAAGAGTGGATTATCACCGGATGAGCACACATATGGTCTTCTCGTTGATGCTTATGCAAATGTGGGCAGATGGGAAAGTGCAAGACATCTTTTGAAACAAATGGAAGCTAGAAATGTACAGCCCAACTCCTTTATTTTCAGTAGGATTTTAGCTAGTTATCGAGACCGTGGCGAATGGCAGAAAACATTTGAAGTTTTGAGGGAAATGAAGAATAGCAATGTCAAACCTGATAGGCATTTTTACAATGTTATGATCGATACTTTTGGGAAATTCAATTGTCTTGATCATGCCATGGAAACATATGACCGGATGCTCTCGGAGGGGATTGAACCAGATGTTGTTACTTGGAACACACTTATAGACTGTCATTGTAAGCACGGATACCATGACAGGGCTGCAGAATTGTTCGAGGAAATGCAGGAGCGTGGTTATTTACCTTGTCCCACAACATATAATATTATGATCAATTCGTTAGGAGAGCAGGAAAAGTGGGACGAGGTTAAAATCTTGTTAGGAAAGATGCAGAGTCAGGGCTTACTTCCCAATGTGATAACATACACTACACTTGTTGATATATATGGACAGTCGGGGAGGTTTAACGATGCAATTGAGTGCTTGGAGGCCATGAAGTCTGCTGGGCTGAAACCATCCTCAACTATGTATAATGCTTTAATCAATGCCTTTGCTCAAAGATTATTGGCAGCAGAAGCAGGTTCACCATCCGATTTGGAGCCTATGGGTTTGTCAGAGCAGGCAGTAAATGCATATAGAGTTATGAGATCAGATGGATTAAAGCCCAGTCTCTTGGCTCTTAATTCATTGATCAATGCCTTTGGCGAGGATAGGAGAGACATTGAAGCCTTTTCAATCTTGCAGTACATGAAAGAAAATGATGTGAAGCCTGATGTTGTCACATATACAACACTTATGAAAGCTTTGATCCGTGTTGACAAATTTGACAAGGTTCCGGCTGTGTATGAAGAGATGATTTTGTCTGGATGTACTCCTGATGGAAAGGCCAGAGCCATGTTGCGGTCTGCCCTCAGATACATGAAGCGTACTCTAAGCTTATAG

Protein sequence

MLLLSPLPLSTHFPATQFPSLTVFLHHQNPHLTTHLSFPFISAATATTSSSLVTCYTSSDALDLDLDVFENDPVFLQSRRYDFTPLLDFLTRSSAYPKSDSEVEFNSTLNSGSDSDTASPTSLDPTEFQLAEAYRAVPAPLWHSLLKSLCSSSSSIGLGYAVVSWLQKHNLCFSYELLYSILIHALGRSEKLYEAFILSQKQTLTPLTYNALIGACARNNDLEKALNLMSRMRQDGYQSDFVNYSLIIQSLTRTNKIDVPILQKLYEEIESDKIELDGQLLNDIILGFAKAGDPNRALYFLSMVQASGLNPKTSTFVAIISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALLKGYARKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQPNSFIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETYDRMLSEGIEPDVVTWNTLIDCHCKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGEQEKWDEVKILLGKMQSQGLLPNVITYTTLVDIYGQSGRFNDAIECLEAMKSAGLKPSSTMYNALINAFAQRLLAAEAGSPSDLEPMGLSEQAVNAYRVMRSDGLKPSLLALNSLINAFGEDRRDIEAFSILQYMKENDVKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPDGKARAMLRSALRYMKRTLSL
Homology
[Close]
BLAST of CaUC08G148960 vs. NCBI nr
Match: XP_038883964.1 (pentatricopeptide repeat-containing protein At5g42310, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 1357.8 bits (3513), Expect = 0.0e+00
Identity = 702/735 (95.51%), Postives = 706/735 (96.05%), Query Frame = 0 

Query: 1   MLLLSPLPLSTHFPATQFPSLTVFLHHQNPHL-TTHLSFPFISAATATTSSSLVTCYTSS 60
           MLLLSPLPLST FP  QFPS TVFLHHQNPH+ TTHL FPFIS ATATTSSS+VTCYTSS
Sbjct: 1   MLLLSPLPLSTRFPVIQFPSPTVFLHHQNPHITTTHLPFPFIS-ATATTSSSVVTCYTSS 60

Query: 61  DALDLDLDVFENDPVFLQSRRYDFTPLLDFLTRSSAYPK--SDSEVEFNSTLNSGSDSDT 120
           DA  L+LDVFENDPV LQSR YDFTPLLDFL+RSS YPK  SDSEVEFNSTLNSGSDSDT
Sbjct: 61  DA--LELDVFENDPVSLQSRHYDFTPLLDFLSRSSLYPKSDSDSEVEFNSTLNSGSDSDT 120

Query: 121 ASPTSLDPTEFQLAEAYRAVPAPLWHSLLKSLCSSSSSIGLGYAVVSWLQKHNLCFSYEL 180
           ASPTSLDPTEFQLAEAYRAVPAPLWHSLLKSLCSSSSSIGLGYAVVSWLQKHNLCFSYEL
Sbjct: 121 ASPTSLDPTEFQLAEAYRAVPAPLWHSLLKSLCSSSSSIGLGYAVVSWLQKHNLCFSYEL 180

Query: 181 LYSILIHALGRSEKLYEAFILSQKQTLTPLTYNALIGACARNNDLEKALNLMSRMRQDGY 240
           LYSILIHALGRSEKLYEAFILSQKQTLTPLTYNALIGACARNNDLEKALNLMSRMRQDGY
Sbjct: 181 LYSILIHALGRSEKLYEAFILSQKQTLTPLTYNALIGACARNNDLEKALNLMSRMRQDGY 240

Query: 241 QSDFVNYSLIIQSLTRTNKIDVPILQKLYEEIESDKIELDGQLLNDIILGFAKAGDPNRA 300
           QSDFVNYSLIIQSLTRTNKIDVPILQKLYEEIESDKIELDGQLLNDIILGFAKAGDPNRA
Sbjct: 241 QSDFVNYSLIIQSLTRTNKIDVPILQKLYEEIESDKIELDGQLLNDIILGFAKAGDPNRA 300

Query: 301 LYFLSMVQASGLNPKTSTFVAIISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALLKG 360
           LYFLSMVQASGLNPKTSTFVAIISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALLKG
Sbjct: 301 LYFLSMVQASGLNPKTSTFVAIISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALLKG 360

Query: 361 YARKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQPN 420
           YARKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQPN
Sbjct: 361 YARKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQPN 420

Query: 421 SFIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETYD 480
           SFIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETYD
Sbjct: 421 SFIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETYD 480

Query: 481 RMLSEGIEPDVVTWNTLIDCHCKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGEQE 540
           RMLSEGIEPDVVTWNTLIDCHCKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGEQE
Sbjct: 481 RMLSEGIEPDVVTWNTLIDCHCKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGEQE 540

Query: 541 KWDEVKILLGKMQSQGLLPNVITYTTLVDIYGQSGRFNDAIECLEAMKSAGLKPSSTMYN 600
           KWDEVKILLGKMQSQGLLPNVITYTTLVDIYGQSGRFNDAIECLEAMKSAGLKPSSTMYN
Sbjct: 541 KWDEVKILLGKMQSQGLLPNVITYTTLVDIYGQSGRFNDAIECLEAMKSAGLKPSSTMYN 600

Query: 601 ALINAFAQRLLAAEAGSPSDLEPMGLSEQAVNAYRVMRSDGLKPSLLALNSLINAFGEDR 660
           ALINAFAQR               GLSEQAVNAYRVMRSDGLKPSLLALNSLINAFGEDR
Sbjct: 601 ALINAFAQR---------------GLSEQAVNAYRVMRSDGLKPSLLALNSLINAFGEDR 660

Query: 661 RDIEAFSILQYMKENDVKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPDGKARA 720
           RDIEAFSILQYMKENDVKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPDGKARA
Sbjct: 661 RDIEAFSILQYMKENDVKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPDGKARA 717

Query: 721 MLRSALRYMKRTLSL 733
           MLRSALRYMKRTLSL
Sbjct: 721 MLRSALRYMKRTLSL 717

[Close]
BLAST of CaUC08G148960 vs. NCBI nr
Match: XP_008464858.1 (PREDICTED: pentatricopeptide repeat-containing protein At5g42310, mitochondrial [Cucumis melo])

HSP 1 Score: 1325.1 bits (3428), Expect = 0.0e+00
Identity = 682/737 (92.54%), Postives = 698/737 (94.71%), Query Frame = 0 

Query: 1   MLLLSPLPLSTHFPATQFPSLTVFLHHQNPHL-TTHLSFPFISAATATTSSSLVTCYTSS 60
           MLLLSPLPLST FPAT   S  VFLHH NPH+ TTHLSF FISAA A TSSS+VTCYTSS
Sbjct: 1   MLLLSPLPLSTRFPATHLSSPAVFLHHHNPHITTTHLSFSFISAAAAATSSSVVTCYTSS 60

Query: 61  DALDLDLDVFENDPVFLQSRRYDFTPLLDFLTRSSAYPKS----DSEVEFNSTLNSGSDS 120
           D  +L+ DVFE+DPV LQSRRYDFTPLLDFL+RSSAYPKS    DSEVEF+ TLNSGSDS
Sbjct: 61  D--NLEFDVFEDDPVSLQSRRYDFTPLLDFLSRSSAYPKSDSDTDSEVEFDFTLNSGSDS 120

Query: 121 DTASPTSLDPTEFQLAEAYRAVPAPLWHSLLKSLCSSSSSIGLGYAVVSWLQKHNLCFSY 180
           DTASPTSLDPTEFQLAEAYRAVPAPLWHSLLKSLCSSSSSIGLGYAVVSWLQKHNLCFSY
Sbjct: 121 DTASPTSLDPTEFQLAEAYRAVPAPLWHSLLKSLCSSSSSIGLGYAVVSWLQKHNLCFSY 180

Query: 181 ELLYSILIHALGRSEKLYEAFILSQKQTLTPLTYNALIGACARNNDLEKALNLMSRMRQD 240
           ELLYSILIHALGRSEKLYEAFILSQKQTLTPLTYNALIGACARNNDLEKALNLMSRMRQD
Sbjct: 181 ELLYSILIHALGRSEKLYEAFILSQKQTLTPLTYNALIGACARNNDLEKALNLMSRMRQD 240

Query: 241 GYQSDFVNYSLIIQSLTRTNKIDVPILQKLYEEIESDKIELDGQLLNDIILGFAKAGDPN 300
           G+QSDFVNYSLIIQSLTRTNKID+PILQKLYEEIESDKIELDG LLNDIILGFAKAGDPN
Sbjct: 241 GFQSDFVNYSLIIQSLTRTNKIDIPILQKLYEEIESDKIELDGLLLNDIILGFAKAGDPN 300

Query: 301 RALYFLSMVQASGLNPKTSTFVAIISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALL 360
           RALYFLSMVQASGLNPKTSTFVA+ISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALL
Sbjct: 301 RALYFLSMVQASGLNPKTSTFVAVISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALL 360

Query: 361 KGYARKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQ 420
           KGYARKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQ
Sbjct: 361 KGYARKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQ 420

Query: 421 PNSFIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMET 480
           PN+FIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMET
Sbjct: 421 PNTFIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMET 480

Query: 481 YDRMLSEGIEPDVVTWNTLIDCHCKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGE 540
           YDRMLSEGIEPDVVTWNTLIDCH KHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGE
Sbjct: 481 YDRMLSEGIEPDVVTWNTLIDCHRKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGE 540

Query: 541 QEKWDEVKILLGKMQSQGLLPNVITYTTLVDIYGQSGRFNDAIECLEAMKSAGLKPSSTM 600
           QEKWDEVKILLGKMQSQGLLPNV+TYTTLVDIYG SGRFNDAI+CLEAMKSAGLKPS+TM
Sbjct: 541 QEKWDEVKILLGKMQSQGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKSAGLKPSATM 600

Query: 601 YNALINAFAQRLLAAEAGSPSDLEPMGLSEQAVNAYRVMRSDGLKPSLLALNSLINAFGE 660
           YNALINAFAQR               GLSEQAVNAYRVM SDGL+PSLLALNSLINAFGE
Sbjct: 601 YNALINAFAQR---------------GLSEQAVNAYRVMISDGLRPSLLALNSLINAFGE 660

Query: 661 DRRDIEAFSILQYMKENDVKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPDGKA 720
           DRRD+EAFSILQYMKENDVKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPDGKA
Sbjct: 661 DRRDMEAFSILQYMKENDVKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPDGKA 720

Query: 721 RAMLRSALRYMKRTLSL 733
           RAMLRSALRYMKRTLSL
Sbjct: 721 RAMLRSALRYMKRTLSL 720

[Close]
BLAST of CaUC08G148960 vs. NCBI nr
Match: KAA0038458.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1320.4 bits (3416), Expect = 0.0e+00
Identity = 682/737 (92.54%), Postives = 698/737 (94.71%), Query Frame = 0 

Query: 1   MLLLSPLPLSTHFPATQFPSLTVFLHHQNPHL-TTHLSFPFISAATATTSSSLVTCYTSS 60
           MLLLSPLPLST FPAT   S  VFLHH NPH+ TTHLSF FISAA A TSSS+VTCYTSS
Sbjct: 1   MLLLSPLPLSTRFPATHLSSPAVFLHH-NPHITTTHLSFSFISAAAAATSSSVVTCYTSS 60

Query: 61  DALDLDLDVFENDPVFLQSRRYDFTPLLDFLTRSSAYPKS----DSEVEFNSTLNSGSDS 120
           D  +L+ DVFE+DPV LQSRRYDFTPLLDFL+RSSAYPKS    DSEVEF+ TLNSGSDS
Sbjct: 61  D--NLEFDVFEDDPVSLQSRRYDFTPLLDFLSRSSAYPKSDSDTDSEVEFDFTLNSGSDS 120

Query: 121 DTASPTSLDPTEFQLAEAYRAVPAPLWHSLLKSLCSSSSSIGLGYAVVSWLQKHNLCFSY 180
           DTASPTSLDPTEFQLAEAYRAVPAPLWHSLLKSLCSSSSSIGLGYAVVSWLQKHNLCFSY
Sbjct: 121 DTASPTSLDPTEFQLAEAYRAVPAPLWHSLLKSLCSSSSSIGLGYAVVSWLQKHNLCFSY 180

Query: 181 ELLYSILIHALGRSEKLYEAFILSQKQTLTPLTYNALIGACARNNDLEKALNLMSRMRQD 240
           ELLYSILIHALGRSEKLYEAFILSQKQTLTPLTYNALIGACARNNDLEKALNLMSRMRQD
Sbjct: 181 ELLYSILIHALGRSEKLYEAFILSQKQTLTPLTYNALIGACARNNDLEKALNLMSRMRQD 240

Query: 241 GYQSDFVNYSLIIQSLTRTNKIDVPILQKLYEEIESDKIELDGQLLNDIILGFAKAGDPN 300
           G+QSDFVNYSLIIQSLTRTNKID+PILQKLYEEIESDKIELDG LLNDIILGFAKAGDPN
Sbjct: 241 GFQSDFVNYSLIIQSLTRTNKIDIPILQKLYEEIESDKIELDGLLLNDIILGFAKAGDPN 300

Query: 301 RALYFLSMVQASGLNPKTSTFVAIISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALL 360
           RALYFLSMVQASGLNPKTSTFVA+ISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALL
Sbjct: 301 RALYFLSMVQASGLNPKTSTFVAVISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALL 360

Query: 361 KGYARKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQ 420
           KGYARKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQ
Sbjct: 361 KGYARKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQ 420

Query: 421 PNSFIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMET 480
           PN+FIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMET
Sbjct: 421 PNTFIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMET 480

Query: 481 YDRMLSEGIEPDVVTWNTLIDCHCKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGE 540
           YDRMLSEGIEPDVVTWNTLIDCH KHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGE
Sbjct: 481 YDRMLSEGIEPDVVTWNTLIDCHRKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGE 540

Query: 541 QEKWDEVKILLGKMQSQGLLPNVITYTTLVDIYGQSGRFNDAIECLEAMKSAGLKPSSTM 600
           QEKWDEVKILLGKMQSQGLLPNV+TYTTLVDIYG SGRFNDAI+CLEAMKSAGLKPS+TM
Sbjct: 541 QEKWDEVKILLGKMQSQGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKSAGLKPSATM 600

Query: 601 YNALINAFAQRLLAAEAGSPSDLEPMGLSEQAVNAYRVMRSDGLKPSLLALNSLINAFGE 660
           YNALINAFAQR               GLSEQAVNAYRVM SDGL+PSLLALNSLINAFGE
Sbjct: 601 YNALINAFAQR---------------GLSEQAVNAYRVMISDGLRPSLLALNSLINAFGE 660

Query: 661 DRRDIEAFSILQYMKENDVKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPDGKA 720
           DRRD+EAFSILQYMKENDVKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPDGKA
Sbjct: 661 DRRDMEAFSILQYMKENDVKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPDGKA 719

Query: 721 RAMLRSALRYMKRTLSL 733
           RAMLRSALRYMKRTLSL
Sbjct: 721 RAMLRSALRYMKRTLSL 719

[Close]
BLAST of CaUC08G148960 vs. NCBI nr
Match: XP_004144287.1 (pentatricopeptide repeat-containing protein At5g42310, chloroplastic [Cucumis sativus] >KGN47545.1 hypothetical protein Csa_019043 [Cucumis sativus])

HSP 1 Score: 1314.7 bits (3401), Expect = 0.0e+00
Identity = 679/738 (92.01%), Postives = 697/738 (94.44%), Query Frame = 0 

Query: 1   MLLLSPLPLSTHFPATQFPSLTVFL-HHQNPHL-TTHLSFPFISAATATTSSSLVTCYTS 60
           MLLLSPLPLST FPAT   S  VFL HH NPH+ TTHLSF F S A AT+SSSLVTCYTS
Sbjct: 1   MLLLSPLPLSTRFPATHLSSPPVFLHHHHNPHIATTHLSFSFFS-APATSSSSLVTCYTS 60

Query: 61  SDALDLDLDVFENDPVFLQSRRYDFTPLLDFLTRSSAYPK----SDSEVEFNSTLNSGSD 120
           SD  +L+ DVFENDPV LQSRRYDFTPLLDFL+RSSAYPK    SDSEVEF+ST NSGSD
Sbjct: 61  SD--NLEFDVFENDPVSLQSRRYDFTPLLDFLSRSSAYPKFDSDSDSEVEFDSTFNSGSD 120

Query: 121 SDTASPTSLDPTEFQLAEAYRAVPAPLWHSLLKSLCSSSSSIGLGYAVVSWLQKHNLCFS 180
           SDTASPTSLDPTEFQLAEAYRAVPAPLWHSLLKSLCSSSSSIGLGYAVVSWLQ+HNLCFS
Sbjct: 121 SDTASPTSLDPTEFQLAEAYRAVPAPLWHSLLKSLCSSSSSIGLGYAVVSWLQRHNLCFS 180

Query: 181 YELLYSILIHALGRSEKLYEAFILSQKQTLTPLTYNALIGACARNNDLEKALNLMSRMRQ 240
           YELLYSILIHALGRSEKLYEAFILSQKQTLTPLTYNALIGACARNNDLEKALNLMSRMRQ
Sbjct: 181 YELLYSILIHALGRSEKLYEAFILSQKQTLTPLTYNALIGACARNNDLEKALNLMSRMRQ 240

Query: 241 DGYQSDFVNYSLIIQSLTRTNKIDVPILQKLYEEIESDKIELDGQLLNDIILGFAKAGDP 300
           DG+QSDF+NYSLIIQSLTRTNKID+P+LQKLYEEIESDKIELDG LLNDIILGFAKAGDP
Sbjct: 241 DGFQSDFINYSLIIQSLTRTNKIDIPLLQKLYEEIESDKIELDGLLLNDIILGFAKAGDP 300

Query: 301 NRALYFLSMVQASGLNPKTSTFVAIISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNAL 360
           NRALYFLSMVQASGLNPKTSTFVA+ISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNAL
Sbjct: 301 NRALYFLSMVQASGLNPKTSTFVAVISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNAL 360

Query: 361 LKGYARKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNV 420
           LKGYARKGSLKEAESI+SEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNV
Sbjct: 361 LKGYARKGSLKEAESIISEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNV 420

Query: 421 QPNSFIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAME 480
           QPN+FIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAME
Sbjct: 421 QPNTFIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAME 480

Query: 481 TYDRMLSEGIEPDVVTWNTLIDCHCKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLG 540
           TYDRMLSEGIEPDVVTWNTLIDCH KHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLG
Sbjct: 481 TYDRMLSEGIEPDVVTWNTLIDCHRKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLG 540

Query: 541 EQEKWDEVKILLGKMQSQGLLPNVITYTTLVDIYGQSGRFNDAIECLEAMKSAGLKPSST 600
           EQEKWDEVKILLGKMQSQGLLPNV+TYTTLVDIYG SGRFNDAI+CLEAMKSAGLKPS+T
Sbjct: 541 EQEKWDEVKILLGKMQSQGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKSAGLKPSAT 600

Query: 601 MYNALINAFAQRLLAAEAGSPSDLEPMGLSEQAVNAYRVMRSDGLKPSLLALNSLINAFG 660
           MYNALINAFAQR               GLSEQAVNAYRVM SDGL+PSLLALNSLINAFG
Sbjct: 601 MYNALINAFAQR---------------GLSEQAVNAYRVMISDGLRPSLLALNSLINAFG 660

Query: 661 EDRRDIEAFSILQYMKENDVKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPDGK 720
           EDRRDIEAFSILQYMKENDVKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPDGK
Sbjct: 661 EDRRDIEAFSILQYMKENDVKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPDGK 720

Query: 721 ARAMLRSALRYMKRTLSL 733
           ARAMLRSALRYMKRTLSL
Sbjct: 721 ARAMLRSALRYMKRTLSL 720

[Close]
BLAST of CaUC08G148960 vs. NCBI nr
Match: XP_022999638.1 (pentatricopeptide repeat-containing protein At5g42310, chloroplastic [Cucurbita maxima])

HSP 1 Score: 1299.6 bits (3362), Expect = 0.0e+00
Identity = 671/736 (91.17%), Postives = 692/736 (94.02%), Query Frame = 0 

Query: 1   MLLLSPLPLSTHFPATQFPSLTVFLHHQNPHLTTHLSFPFISAATATTS--SSLVTCYTS 60
           MLLLSPLPLST FPATQ PS TVFLHHQNP +TTHLSFP ISAA ATT+  SS+VTC TS
Sbjct: 1   MLLLSPLPLSTRFPATQLPSPTVFLHHQNPPITTHLSFPIISAAAATTASFSSVVTCSTS 60

Query: 61  SDALDLDLDVFENDPVFLQSRRYDFTPLLDFLTRSSAYPK--SDSEVEFNSTLNSGSDSD 120
           SDA  L+LDVFEND V  QSRRYDFTPLLDFL+RS AYPK  SDSEVEF+S L+S S+SD
Sbjct: 61  SDA--LELDVFENDHVSFQSRRYDFTPLLDFLSRSPAYPKSDSDSEVEFDSVLDSDSESD 120

Query: 121 TASPTSLDPTEFQLAEAYRAVPAPLWHSLLKSLCSSSSSIGLGYAVVSWLQKHNLCFSYE 180
            ASPTSLDPTEFQLAE YRAVPAPLWHSLLKSLC+SSSSIGLGYAVV WLQKHNLCFSYE
Sbjct: 121 KASPTSLDPTEFQLAETYRAVPAPLWHSLLKSLCASSSSIGLGYAVVLWLQKHNLCFSYE 180

Query: 181 LLYSILIHALGRSEKLYEAFILSQKQTLTPLTYNALIGACARNNDLEKALNLMSRMRQDG 240
           LLYSILIHALGRSEKLYEAFILSQ QTLTPLTYNALIGACARNND EKALNL+SRMRQDG
Sbjct: 181 LLYSILIHALGRSEKLYEAFILSQSQTLTPLTYNALIGACARNNDSEKALNLISRMRQDG 240

Query: 241 YQSDFVNYSLIIQSLTRTNKIDVPILQKLYEEIESDKIELDGQLLNDIILGFAKAGDPNR 300
           YQSDFVNYSLIIQSLTRTNKIDVPILQKLYEEIESDKIELDGQLLNDIILGFAKAGDPNR
Sbjct: 241 YQSDFVNYSLIIQSLTRTNKIDVPILQKLYEEIESDKIELDGQLLNDIILGFAKAGDPNR 300

Query: 301 ALYFLSMVQASGLNPKTSTFVAIISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALLK 360
           ALYFLSMVQASGLNPKTSTFVAIISALGN+GRTEEAEAIFEEMKEGGLKPRIKAFNALLK
Sbjct: 301 ALYFLSMVQASGLNPKTSTFVAIISALGNYGRTEEAEAIFEEMKEGGLKPRIKAFNALLK 360

Query: 361 GYARKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQP 420
           GYA+KGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVG W+SAR LLKQMEARNVQP
Sbjct: 361 GYAKKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGSWQSARQLLKQMEARNVQP 420

Query: 421 NSFIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETY 480
           N+FIFSRILASYRDRGEWQKTFEVLREMKN NVKPDRHFYNVMIDTFGKFNC+DHAMETY
Sbjct: 421 NTFIFSRILASYRDRGEWQKTFEVLREMKNCNVKPDRHFYNVMIDTFGKFNCVDHAMETY 480

Query: 481 DRMLSEGIEPDVVTWNTLIDCHCKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGEQ 540
           +RMLSEGIEPDVVTWNTLIDCH KHGYH+RAAELFEEMQERGY PCPTTYNIMINSLGEQ
Sbjct: 481 ERMLSEGIEPDVVTWNTLIDCHRKHGYHERAAELFEEMQERGYFPCPTTYNIMINSLGEQ 540

Query: 541 EKWDEVKILLGKMQSQGLLPNVITYTTLVDIYGQSGRFNDAIECLEAMKSAGLKPSSTMY 600
           EKWDEVKILLGKMQSQGLLPNVITYTTLVDIYGQSGRFNDAIECLEAMKSAGLKPSSTMY
Sbjct: 541 EKWDEVKILLGKMQSQGLLPNVITYTTLVDIYGQSGRFNDAIECLEAMKSAGLKPSSTMY 600

Query: 601 NALINAFAQRLLAAEAGSPSDLEPMGLSEQAVNAYRVMRSDGLKPSLLALNSLINAFGED 660
           NALINAFAQ+               GLSEQAVNAYRVMRSDGLKPSLLALNSLINAFGED
Sbjct: 601 NALINAFAQK---------------GLSEQAVNAYRVMRSDGLKPSLLALNSLINAFGED 660

Query: 661 RRDIEAFSILQYMKENDVKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPDGKAR 720
           RRDIEAF+ILQYMKENDVKPDVVTYTTLMKALIRV+KFDKVPAVYEEMILSGCTPDGKAR
Sbjct: 661 RRDIEAFTILQYMKENDVKPDVVTYTTLMKALIRVEKFDKVPAVYEEMILSGCTPDGKAR 719

Query: 721 AMLRSALRYMKRTLSL 733
           AMLRSAL+YMKRTLSL
Sbjct: 721 AMLRSALKYMKRTLSL 719

[Close]
BLAST of CaUC08G148960 vs. ExPASy Swiss-Prot
Match: Q8L844 (Pentatricopeptide repeat-containing protein At5g42310, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRP1 PE=1 SV=1)

HSP 1 Score: 990.7 bits (2560), Expect = 8.7e-288
Identity = 521/738 (70.60%), Postives = 602/738 (81.57%), Query Frame = 0 

Query: 1   MLLLSPLPLSTHFPATQFPSLTVFLHHQNPHLTTHLSF-PFISAATATTSSSLVTCYTSS 60
           MLLL   PL     +T+F SL    HH + H   H  F P ISA +ATTS+SL +   SS
Sbjct: 1   MLLLQQPPL----VSTRFHSLYFLTHHHHHH---HRFFQPPISAFSATTSASLPSPSPSS 60

Query: 61  DALDLD----LDVFENDPVFLQS---RRYDFTPLLDFLTRSSAYPKSDSEVEFNSTLNSG 120
            +        LD  E +     S   RRYDF+PLL FL+R          VE    L+S 
Sbjct: 61  SSSYFSSWNGLDTNEEEDNEFSSEVHRRYDFSPLLKFLSRF-------GPVEL--ALDSE 120

Query: 121 SDSDTASPTSLDPTEFQLAEAYRAVPAPLWHSLLKSLCSSSSSIGLGYAVVSWLQKHNLC 180
           S+S+ ASP SL+P EF L E+YRAVPAP WHSL+KSL SS+SS+GL YAVVSWLQKHNLC
Sbjct: 121 SESE-ASPESLNPVEFDLVESYRAVPAPYWHSLIKSLTSSTSSLGLAYAVVSWLQKHNLC 180

Query: 181 FSYELLYSILIHALGRSEKLYEAFILSQKQTLTPLTYNALIGACARNNDLEKALNLMSRM 240
           FSYELLYSILIHALGRSEKLYEAF+LSQKQTLTPLTYNALIGACARNND+EKALNL+++M
Sbjct: 181 FSYELLYSILIHALGRSEKLYEAFLLSQKQTLTPLTYNALIGACARNNDIEKALNLIAKM 240

Query: 241 RQDGYQSDFVNYSLIIQSLTRTNKIDVPILQKLYEEIESDKIELDGQLLNDIILGFAKAG 300
           RQDGYQSDFVNYSL+IQSLTR+NKID  +L +LY+EIE DK+ELD QL+NDII+GFAK+G
Sbjct: 241 RQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSG 300

Query: 301 DPNRALYFLSMVQASGLNPKTSTFVAIISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFN 360
           DP++AL  L M QA+GL+ KT+T V+IISAL + GRT EAEA+FEE+++ G+KPR +A+N
Sbjct: 301 DPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYN 360

Query: 361 ALLKGYARKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEAR 420
           ALLKGY + G LK+AES+VSEMEK G+SPDEHTY LL+DAY N GRWESAR +LK+MEA 
Sbjct: 361 ALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAG 420

Query: 421 NVQPNSFIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHA 480
           +VQPNSF+FSR+LA +RDRGEWQKTF+VL+EMK+  VKPDR FYNV+IDTFGKFNCLDHA
Sbjct: 421 DVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHA 480

Query: 481 METYDRMLSEGIEPDVVTWNTLIDCHCKHGYHDRAAELFEEMQERGYLPCPTTYNIMINS 540
           M T+DRMLSEGIEPD VTWNTLIDCHCKHG H  A E+FE M+ RG LPC TTYNIMINS
Sbjct: 481 MTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINS 540

Query: 541 LGEQEKWDEVKILLGKMQSQGLLPNVITYTTLVDIYGQSGRFNDAIECLEAMKSAGLKPS 600
            G+QE+WD++K LLGKM+SQG+LPNV+T+TTLVD+YG+SGRFNDAIECLE MKS GLKPS
Sbjct: 541 YGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPS 600

Query: 601 STMYNALINAFAQRLLAAEAGSPSDLEPMGLSEQAVNAYRVMRSDGLKPSLLALNSLINA 660
           STMYNALINA+AQR               GLSEQAVNA+RVM SDGLKPSLLALNSLINA
Sbjct: 601 STMYNALINAYAQR---------------GLSEQAVNAFRVMTSDGLKPSLLALNSLINA 660

Query: 661 FGEDRRDIEAFSILQYMKENDVKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPD 720
           FGEDRRD EAF++LQYMKEN VKPDVVTYTTLMKALIRVDKF KVP VYEEMI+SGC PD
Sbjct: 661 FGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPD 706

Query: 721 GKARAMLRSALRYMKRTL 731
            KAR+MLRSALRYMK+TL
Sbjct: 721 RKARSMLRSALRYMKQTL 706

[Close]
BLAST of CaUC08G148960 vs. ExPASy Swiss-Prot
Match: A0A1D6IEG9 (Pentatricopeptide repeat-containing protein CRP1, chloroplastic OS=Zea mays OX=4577 GN=CRP1 PE=1 SV=1)

HSP 1 Score: 675.2 bits (1741), Expect = 8.1e-193
Identity = 350/661 (52.95%), Postives = 466/661 (70.50%), Query Frame = 0 

Query: 74  VFLQSRRYDFTPLLDFLTRSSAYPKSDSEVEFNSTLNSGSDSDTASPTSLDPTEFQLAEA 133
           V + + RYDF PLL +L+  S                S S +  + P S+   E +LA +
Sbjct: 33  VSIPASRYDFEPLLAYLSSPSV---------------SASLTSPSPPASVPAPEHRLAAS 92

Query: 134 YRAVPAPLWHSLLKSLCSSSSSIGLGYAVVSWLQKHNLCFSYELLYSILIHALGRSEKLY 193
           Y AVP+  WH+LL+ L +S +S+ L +A++ +L +H LCF  +LL S L+H+L  S +L 
Sbjct: 93  YSAVPSHEWHALLRDLAASDASLPLAFALLPFLHRHRLCFPLDLLLSSLLHSLSVSGRLL 152

Query: 194 -EAFILSQKQTL----TPLTYNALIGACARNNDLEKALNLMSRMRQDGYQSDFVNYSLII 253
             + +LS   +L    +PL  N+L+ A A  +    AL L+S +R+  +  D  +YS ++
Sbjct: 153 PHSLLLSFPPSLSDPPSPLLLNSLLAASAAASRPAVALRLLSLLREHDFLPDLASYSHLL 212

Query: 254 QSLTRT-NKIDVPILQKLYEEIESDKIELDGQLLNDIILGFAKAGDPNRALYFLSMVQAS 313
            SL  T +  D  +L++L  ++   ++E D  L +D+I  FA+A  P+ AL  L+  QA 
Sbjct: 213 ASLLNTRDPPDAALLERLLGDLRESRLEPDAPLFSDLISAFARAALPDAALELLASAQAI 272

Query: 314 GLNPKTSTFVAIISALGNHGRTEEAEAIF-EEMKEGGLKPRIKAFNALLKGYARKGSLKE 373
           GL P+++   A+ISALG  GR  EAEA+F E    G +KPR +A+NALLKGY R  SLK 
Sbjct: 273 GLTPRSNAVTALISALGTAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRIASLKN 332

Query: 374 AESIVSEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQPNSFIFSRILA 433
           AE ++ EM + G++PDE TY LLVDAY   GRWESAR LLK+MEA  V+P+S++FSRILA
Sbjct: 333 AEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILA 392

Query: 434 SYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETYDRMLSEGIEP 493
            +RDRG+WQK F VLREM+ S V+PDRHFYNVMIDTFGK+NCL HAM+ +++M  EGIEP
Sbjct: 393 GFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEP 452

Query: 494 DVVTWNTLIDCHCKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGEQEKWDEVKILL 553
           DVVTWNTLID HCK G HDRAAELFEEM+E    P  TTYNIMIN LGEQE W+ V+ +L
Sbjct: 453 DVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAML 512

Query: 554 GKMQSQGLLPNVITYTTLVDIYGQSGRFNDAIECLEAMKSAGLKPSSTMYNALINAFAQR 613
            +M+ QGL+PN+ITYTTLVD+YG+SGR+ +AI+C+EAMK+ GLKPS TMY+AL+NA+AQR
Sbjct: 513 SEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQR 572

Query: 614 LLAAEAGSPSDLEPMGLSEQAVNAYRVMRSDGLKPSLLALNSLINAFGEDRRDIEAFSIL 673
                          GL++ A+N  + M++DGL+ S+L LNSLINAFGEDRR +EAFS+L
Sbjct: 573 ---------------GLADHALNVVKAMKADGLEVSILVLNSLINAFGEDRRVVEAFSVL 632

Query: 674 QYMKENDVKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPDGKARAMLRSALRYM 728
           Q+M+EN ++PDV+TYTTLMKALIRV++FDKVP +YEEMI SGC PD KARAMLRS L+Y+
Sbjct: 633 QFMRENGLRPDVITYTTLMKALIRVEQFDKVPVIYEEMITSGCAPDRKARAMLRSGLKYI 663

[Close]
BLAST of CaUC08G148960 vs. ExPASy Swiss-Prot
Match: Q84ZD2 (Pentatricopeptide repeat-containing protein CRP1 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0548300 PE=3 SV=1)

HSP 1 Score: 669.1 bits (1725), Expect = 5.8e-191
Identity = 349/656 (53.20%), Postives = 462/656 (70.43%), Query Frame = 0 

Query: 80  RYDFTPLLDFLTRSSAYPKSDSEVEFNSTLNSGSDSDTASPTSLDP-TEFQLAEAYRAVP 139
           RYDF PLL +L+ +S+ P                   +  PTS+ P TE +LA +Y AVP
Sbjct: 35  RYDFDPLLSYLSTTSSSP-------------------SPPPTSVLPVTESRLAASYAAVP 94

Query: 140 APLWHSLLKSLCSSSSSIGLGYAVVSWLQKHNLCFSYELLYSILIHALGRSEKLY-EAFI 199
           A  WH+LL+ L ++ +S+ L +A++ +L +H LCF  +LL S L+H+L  S +L   + +
Sbjct: 95  AREWHALLRELAATDASLPLAFALLPFLHRHRLCFPLDLLLSSLLHSLSVSGRLLPHSLL 154

Query: 200 LSQKQTL----TPLTYNALIGACARNNDLEKALNLMSRMRQDGYQSDFVNYSLIIQSLTR 259
           LS   +L    +PL  N+L+ A A  +    AL L+  +R+  +  D  +YS ++ SL  
Sbjct: 155 LSFPPSLSDPPSPLLLNSLLAASAAASRPAVALRLLGLLREHSFLPDLASYSHLLASLLN 214

Query: 260 T-NKIDVPILQKLYEEIESDKIELDGQLLNDIILGFAKAGDPNRALYFLSMVQASGLNPK 319
           T +  D  +L +L  ++   ++E D  L +D+I  FA+A  P+ AL  L+  QA GL P+
Sbjct: 215 TRDPPDAALLDRLLGDLRESRLEPDAPLFSDLISAFARARLPDAALELLASAQAIGLTPR 274

Query: 320 TSTFVAIISALGNHGRTEEAEAIF-EEMKEGGLKPRIKAFNALLKGYARKGSLKEAESIV 379
           ++   A+IS+LG+  R  EAEA+F E    G +KPR +A+NALLKGY + GSLK AE ++
Sbjct: 275 SNAVTALISSLGSARRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVL 334

Query: 380 SEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQPNSFIFSRILASYRDR 439
            EM + G++PDE TY LLVDAY   GRWESAR LLK+MEA  V+P+S++FSRILA +RDR
Sbjct: 335 DEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDR 394

Query: 440 GEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETYDRMLSEGIEPDVVTW 499
           GEWQK F VLREM  S V+PDRHFYNVMIDTFGK+NCL HAM+ +DRM  EGIEPDVVTW
Sbjct: 395 GEWQKAFAVLREMHASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTW 454

Query: 500 NTLIDCHCKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGEQEKWDEVKILLGKMQS 559
           NTLID HCK G HDRA ELF+EM+E       TTYNIMIN LGE+++W+ V+ +L +M+ 
Sbjct: 455 NTLIDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKE 514

Query: 560 QGLLPNVITYTTLVDIYGQSGRFNDAIECLEAMKSAGLKPSSTMYNALINAFAQRLLAAE 619
           QGL+PN+ITYTTLVD+YG+SGRF +A++C+EAMK+ GLKPS TMY+AL+NA+AQR     
Sbjct: 515 QGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSPTMYHALVNAYAQR----- 574

Query: 620 AGSPSDLEPMGLSEQAVNAYRVMRSDGLKPSLLALNSLINAFGEDRRDIEAFSILQYMKE 679
                     GL++ A+N  + MR+DGL+ S + LNSLINAFGEDRR  EAFS+LQ+MKE
Sbjct: 575 ----------GLADHALNVVKAMRADGLEASTVVLNSLINAFGEDRRIAEAFSVLQFMKE 634

Query: 680 NDVKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPDGKARAMLRSALRYMK 728
           N ++PDV+TYTTLMKALIRV++F+KVP +YEEMI SGC PD KARAMLRSALRYMK
Sbjct: 635 NGLRPDVITYTTLMKALIRVEQFEKVPVIYEEMITSGCAPDRKARAMLRSALRYMK 656

[Close]
BLAST of CaUC08G148960 vs. ExPASy Swiss-Prot
Match: B8Y6I0 (Pentatricopeptide repeat-containing protein 10, chloroplastic OS=Zea mays OX=4577 GN=PPR10 PE=1 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 4.2e-56
Identity = 155/611 (25.37%), Postives = 265/611 (43.37%), Query Frame = 0 

Query: 144 SLLKSLCSSSSSIGLGYAVVSWLQKHNLCFSYELLYSILIHALGRSEKLYEAFILSQKQT 203
           SLLK+L   S       A++ W  K     +  L   +++ ALGR  +      L  +  
Sbjct: 109 SLLKAL-ELSGHWEWALALLRWAGKEGAADASAL--EMVVRALGREGQHDAVCALLDETP 168

Query: 204 LTP------LTYNALIGACARNNDLEKALNLMSRMRQDGYQSDFVNYSLIIQSLTRTNKI 263
           L P        Y  ++ A +R    E+AL L + +R+ G     V Y++++    R  + 
Sbjct: 169 LPPGSRLDVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTLVTYNVVLDVYGRMGR- 228

Query: 264 DVPILQKLYEEIESDKIELDGQLLNDIILGFAKAGDPNRALYFLSMVQASGLNPKTSTFV 323
             P +  L +E+ +  +E DG   + +I    + G  + A+ F   ++A G  P   T+ 
Sbjct: 229 SWPRIVALLDEMRAAGVEPDGFTASTVIAACCRDGLVDEAVAFFEDLKARGHAPCVVTYN 288

Query: 324 AIISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALLKGYARKGSLKEAESIVSEMEKS 383
           A++   G  G   EA  +  EM++ G +P    +N L   YAR G  +EA   +  M   
Sbjct: 289 ALLQVFGKAGNYTEALRVLGEMEQNGCQPDAVTYNELAGTYARAGFFEEAARCLDTMASK 348

Query: 384 GLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQPNSFIFSRILASYRDRGEWQKT 443
           GL P+  TY  ++ AY NVG+ + A  L  QM+     PN   ++ +L     +  +   
Sbjct: 349 GLLPNAFTYNTVMTAYGNVGKVDEALALFDQMKKTGFVPNVNTYNLVLGMLGKKSRFTVM 408

Query: 444 FEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETYDRMLSEGIEPDVVTWNTLIDC 503
            E+L EM  S   P+R  +N M+   GK    D+     + M S G+E    T+NTLI  
Sbjct: 409 LEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLEGMRSCGVELSRDTYNTLIAA 468

Query: 504 HCKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGEQEKWDEVKILLGKMQSQGLLPN 563
           + + G    A +++ EM   G+ PC TTYN ++N L  Q  W   + ++ KM+++G  PN
Sbjct: 469 YGRCGSRTNAFKMYNEMTSAGFTPCITTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPN 528

Query: 564 VITYTTLVDIYGQSG------------------------------------RFNDAIECL 623
             +Y+ L+  Y + G                                    R +      
Sbjct: 529 EQSYSLLLQCYAKGGNVAGIAAIENEVYGSGAVFPSWVILRTLVIANFKCRRLDGMETAF 588

Query: 624 EAMKSAGLKPSSTMYNALINAFAQRLLAAEAGSPSDLEPMGLSEQAVNAYRVMRSDGLKP 683
           + +K+ G  P   ++N++++ +A+                G+  +A   +  ++  GL P
Sbjct: 589 QEVKARGYNPDLVIFNSMLSIYAKN---------------GMYSKATEVFDSIKRSGLSP 648

Query: 684 SLLALNSLINAFGEDRRDIEAFSILQYMK-ENDVKPDVVTYTTLMKALIRVDKFDKVPAV 712
            L+  NSL++ + +     EA  IL  +K    +KPDVV+Y T++    +     +   V
Sbjct: 649 DLITYNSLMDMYAKCSESWEAEKILNQLKCSQTMKPDVVSYNTVINGFCKQGLVKEAQRV 700

[Close]
BLAST of CaUC08G148960 vs. ExPASy Swiss-Prot
Match: Q76C99 (Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=Rf1 PE=2 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 5.4e-56
Identity = 151/584 (25.86%), Postives = 262/584 (44.86%), Query Frame = 0 

Query: 137 VPAPLWHSLLKSLCSSSSSIGLGYAVVSWLQKHNLCFSYELLYSILIHALGRSEKLYEAF 196
           V A  +  LLK LC+   +      V+  + +   C      Y+IL+  L    +  EA 
Sbjct: 120 VDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELG-CIPNVFSYNILLKGLCDENRSQEAL 179

Query: 197 ILSQKQT--------LTPLTYNALIGACARNNDLEKALNLMSRMRQDGYQSDFVNYSLII 256
            L                ++Y  +I    +  D +KA +    M   G   D V Y+ II
Sbjct: 180 ELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSII 239

Query: 257 QSLTRTNKIDVPILQKLYEEIESDKIELDGQLLNDIILGFAKAGDPNRALYFLSMVQASG 316
            +L +   +D  +  ++   +  + +  D    N I+ G+  +G P  A+ FL  +++ G
Sbjct: 240 AALCKAQAMDKAM--EVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDG 299

Query: 317 LNPKTSTFVAIISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALLKGYARKGSLKEAE 376
           + P   T+  ++  L  +GR  EA  IF+ M + GLKP I  +  LL+GYA KG+L E  
Sbjct: 300 VEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMH 359

Query: 377 SIVSEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQPNSFIFSRILASY 436
            ++  M ++G+ PD + + +L+ AYA  G+ + A  +  +M  + + PN+  +  ++   
Sbjct: 360 GLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGIL 419

Query: 437 RDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETYDRMLSEGIEPDV 496
              G  +       +M +  + P    YN +I      N  + A E    ML  GI  + 
Sbjct: 420 CKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNT 479

Query: 497 VTWNTLIDCHCKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGEQEKWDEVKILLGK 556
           + +N++ID HCK G    + +LFE M   G  P   TYN +IN      K DE   LL  
Sbjct: 480 IFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSG 539

Query: 557 MQSQGLLPNVITYTTLVDIYGQSGRFNDAIECLEAMKSAGLKPSSTMYNALINAFAQRLL 616
           M S GL PN +TY+TL++ Y +  R  DA+   + M+S+G+ P    YN ++    Q   
Sbjct: 540 MVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRR 599

Query: 617 AAEAGSPSDLEPMGLSEQAVNAYRVMRSDGLKPSLLALNSLINAFGEDRRDIEAFSILQY 676
            A                A   Y  +   G +  L   N +++   +++   +A  + Q 
Sbjct: 600 TA---------------AAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQN 659

Query: 677 MKENDVKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPD 713
           +   D+K +  T+  ++ AL++V + D+   ++     +G  P+
Sbjct: 660 LCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPN 685

[Close]
BLAST of CaUC08G148960 vs. ExPASy TrEMBL
Match: A0A1S3CMJ2 (pentatricopeptide repeat-containing protein At5g42310, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103502629 PE=4 SV=1)

HSP 1 Score: 1325.1 bits (3428), Expect = 0.0e+00
Identity = 682/737 (92.54%), Postives = 698/737 (94.71%), Query Frame = 0 

Query: 1   MLLLSPLPLSTHFPATQFPSLTVFLHHQNPHL-TTHLSFPFISAATATTSSSLVTCYTSS 60
           MLLLSPLPLST FPAT   S  VFLHH NPH+ TTHLSF FISAA A TSSS+VTCYTSS
Sbjct: 1   MLLLSPLPLSTRFPATHLSSPAVFLHHHNPHITTTHLSFSFISAAAAATSSSVVTCYTSS 60

Query: 61  DALDLDLDVFENDPVFLQSRRYDFTPLLDFLTRSSAYPKS----DSEVEFNSTLNSGSDS 120
           D  +L+ DVFE+DPV LQSRRYDFTPLLDFL+RSSAYPKS    DSEVEF+ TLNSGSDS
Sbjct: 61  D--NLEFDVFEDDPVSLQSRRYDFTPLLDFLSRSSAYPKSDSDTDSEVEFDFTLNSGSDS 120

Query: 121 DTASPTSLDPTEFQLAEAYRAVPAPLWHSLLKSLCSSSSSIGLGYAVVSWLQKHNLCFSY 180
           DTASPTSLDPTEFQLAEAYRAVPAPLWHSLLKSLCSSSSSIGLGYAVVSWLQKHNLCFSY
Sbjct: 121 DTASPTSLDPTEFQLAEAYRAVPAPLWHSLLKSLCSSSSSIGLGYAVVSWLQKHNLCFSY 180

Query: 181 ELLYSILIHALGRSEKLYEAFILSQKQTLTPLTYNALIGACARNNDLEKALNLMSRMRQD 240
           ELLYSILIHALGRSEKLYEAFILSQKQTLTPLTYNALIGACARNNDLEKALNLMSRMRQD
Sbjct: 181 ELLYSILIHALGRSEKLYEAFILSQKQTLTPLTYNALIGACARNNDLEKALNLMSRMRQD 240

Query: 241 GYQSDFVNYSLIIQSLTRTNKIDVPILQKLYEEIESDKIELDGQLLNDIILGFAKAGDPN 300
           G+QSDFVNYSLIIQSLTRTNKID+PILQKLYEEIESDKIELDG LLNDIILGFAKAGDPN
Sbjct: 241 GFQSDFVNYSLIIQSLTRTNKIDIPILQKLYEEIESDKIELDGLLLNDIILGFAKAGDPN 300

Query: 301 RALYFLSMVQASGLNPKTSTFVAIISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALL 360
           RALYFLSMVQASGLNPKTSTFVA+ISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALL
Sbjct: 301 RALYFLSMVQASGLNPKTSTFVAVISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALL 360

Query: 361 KGYARKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQ 420
           KGYARKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQ
Sbjct: 361 KGYARKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQ 420

Query: 421 PNSFIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMET 480
           PN+FIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMET
Sbjct: 421 PNTFIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMET 480

Query: 481 YDRMLSEGIEPDVVTWNTLIDCHCKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGE 540
           YDRMLSEGIEPDVVTWNTLIDCH KHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGE
Sbjct: 481 YDRMLSEGIEPDVVTWNTLIDCHRKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGE 540

Query: 541 QEKWDEVKILLGKMQSQGLLPNVITYTTLVDIYGQSGRFNDAIECLEAMKSAGLKPSSTM 600
           QEKWDEVKILLGKMQSQGLLPNV+TYTTLVDIYG SGRFNDAI+CLEAMKSAGLKPS+TM
Sbjct: 541 QEKWDEVKILLGKMQSQGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKSAGLKPSATM 600

Query: 601 YNALINAFAQRLLAAEAGSPSDLEPMGLSEQAVNAYRVMRSDGLKPSLLALNSLINAFGE 660
           YNALINAFAQR               GLSEQAVNAYRVM SDGL+PSLLALNSLINAFGE
Sbjct: 601 YNALINAFAQR---------------GLSEQAVNAYRVMISDGLRPSLLALNSLINAFGE 660

Query: 661 DRRDIEAFSILQYMKENDVKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPDGKA 720
           DRRD+EAFSILQYMKENDVKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPDGKA
Sbjct: 661 DRRDMEAFSILQYMKENDVKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPDGKA 720

Query: 721 RAMLRSALRYMKRTLSL 733
           RAMLRSALRYMKRTLSL
Sbjct: 721 RAMLRSALRYMKRTLSL 720

[Close]
BLAST of CaUC08G148960 vs. ExPASy TrEMBL
Match: A0A5A7T6H7 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold119G00250 PE=4 SV=1)

HSP 1 Score: 1320.4 bits (3416), Expect = 0.0e+00
Identity = 682/737 (92.54%), Postives = 698/737 (94.71%), Query Frame = 0 

Query: 1   MLLLSPLPLSTHFPATQFPSLTVFLHHQNPHL-TTHLSFPFISAATATTSSSLVTCYTSS 60
           MLLLSPLPLST FPAT   S  VFLHH NPH+ TTHLSF FISAA A TSSS+VTCYTSS
Sbjct: 1   MLLLSPLPLSTRFPATHLSSPAVFLHH-NPHITTTHLSFSFISAAAAATSSSVVTCYTSS 60

Query: 61  DALDLDLDVFENDPVFLQSRRYDFTPLLDFLTRSSAYPKS----DSEVEFNSTLNSGSDS 120
           D  +L+ DVFE+DPV LQSRRYDFTPLLDFL+RSSAYPKS    DSEVEF+ TLNSGSDS
Sbjct: 61  D--NLEFDVFEDDPVSLQSRRYDFTPLLDFLSRSSAYPKSDSDTDSEVEFDFTLNSGSDS 120

Query: 121 DTASPTSLDPTEFQLAEAYRAVPAPLWHSLLKSLCSSSSSIGLGYAVVSWLQKHNLCFSY 180
           DTASPTSLDPTEFQLAEAYRAVPAPLWHSLLKSLCSSSSSIGLGYAVVSWLQKHNLCFSY
Sbjct: 121 DTASPTSLDPTEFQLAEAYRAVPAPLWHSLLKSLCSSSSSIGLGYAVVSWLQKHNLCFSY 180

Query: 181 ELLYSILIHALGRSEKLYEAFILSQKQTLTPLTYNALIGACARNNDLEKALNLMSRMRQD 240
           ELLYSILIHALGRSEKLYEAFILSQKQTLTPLTYNALIGACARNNDLEKALNLMSRMRQD
Sbjct: 181 ELLYSILIHALGRSEKLYEAFILSQKQTLTPLTYNALIGACARNNDLEKALNLMSRMRQD 240

Query: 241 GYQSDFVNYSLIIQSLTRTNKIDVPILQKLYEEIESDKIELDGQLLNDIILGFAKAGDPN 300
           G+QSDFVNYSLIIQSLTRTNKID+PILQKLYEEIESDKIELDG LLNDIILGFAKAGDPN
Sbjct: 241 GFQSDFVNYSLIIQSLTRTNKIDIPILQKLYEEIESDKIELDGLLLNDIILGFAKAGDPN 300

Query: 301 RALYFLSMVQASGLNPKTSTFVAIISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALL 360
           RALYFLSMVQASGLNPKTSTFVA+ISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALL
Sbjct: 301 RALYFLSMVQASGLNPKTSTFVAVISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALL 360

Query: 361 KGYARKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQ 420
           KGYARKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQ
Sbjct: 361 KGYARKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQ 420

Query: 421 PNSFIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMET 480
           PN+FIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMET
Sbjct: 421 PNTFIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMET 480

Query: 481 YDRMLSEGIEPDVVTWNTLIDCHCKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGE 540
           YDRMLSEGIEPDVVTWNTLIDCH KHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGE
Sbjct: 481 YDRMLSEGIEPDVVTWNTLIDCHRKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGE 540

Query: 541 QEKWDEVKILLGKMQSQGLLPNVITYTTLVDIYGQSGRFNDAIECLEAMKSAGLKPSSTM 600
           QEKWDEVKILLGKMQSQGLLPNV+TYTTLVDIYG SGRFNDAI+CLEAMKSAGLKPS+TM
Sbjct: 541 QEKWDEVKILLGKMQSQGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKSAGLKPSATM 600

Query: 601 YNALINAFAQRLLAAEAGSPSDLEPMGLSEQAVNAYRVMRSDGLKPSLLALNSLINAFGE 660
           YNALINAFAQR               GLSEQAVNAYRVM SDGL+PSLLALNSLINAFGE
Sbjct: 601 YNALINAFAQR---------------GLSEQAVNAYRVMISDGLRPSLLALNSLINAFGE 660

Query: 661 DRRDIEAFSILQYMKENDVKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPDGKA 720
           DRRD+EAFSILQYMKENDVKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPDGKA
Sbjct: 661 DRRDMEAFSILQYMKENDVKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPDGKA 719

Query: 721 RAMLRSALRYMKRTLSL 733
           RAMLRSALRYMKRTLSL
Sbjct: 721 RAMLRSALRYMKRTLSL 719

[Close]
BLAST of CaUC08G148960 vs. ExPASy TrEMBL
Match: A0A0A0KCZ6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G358090 PE=4 SV=1)

HSP 1 Score: 1314.7 bits (3401), Expect = 0.0e+00
Identity = 679/738 (92.01%), Postives = 697/738 (94.44%), Query Frame = 0 

Query: 1   MLLLSPLPLSTHFPATQFPSLTVFL-HHQNPHL-TTHLSFPFISAATATTSSSLVTCYTS 60
           MLLLSPLPLST FPAT   S  VFL HH NPH+ TTHLSF F S A AT+SSSLVTCYTS
Sbjct: 1   MLLLSPLPLSTRFPATHLSSPPVFLHHHHNPHIATTHLSFSFFS-APATSSSSLVTCYTS 60

Query: 61  SDALDLDLDVFENDPVFLQSRRYDFTPLLDFLTRSSAYPK----SDSEVEFNSTLNSGSD 120
           SD  +L+ DVFENDPV LQSRRYDFTPLLDFL+RSSAYPK    SDSEVEF+ST NSGSD
Sbjct: 61  SD--NLEFDVFENDPVSLQSRRYDFTPLLDFLSRSSAYPKFDSDSDSEVEFDSTFNSGSD 120

Query: 121 SDTASPTSLDPTEFQLAEAYRAVPAPLWHSLLKSLCSSSSSIGLGYAVVSWLQKHNLCFS 180
           SDTASPTSLDPTEFQLAEAYRAVPAPLWHSLLKSLCSSSSSIGLGYAVVSWLQ+HNLCFS
Sbjct: 121 SDTASPTSLDPTEFQLAEAYRAVPAPLWHSLLKSLCSSSSSIGLGYAVVSWLQRHNLCFS 180

Query: 181 YELLYSILIHALGRSEKLYEAFILSQKQTLTPLTYNALIGACARNNDLEKALNLMSRMRQ 240
           YELLYSILIHALGRSEKLYEAFILSQKQTLTPLTYNALIGACARNNDLEKALNLMSRMRQ
Sbjct: 181 YELLYSILIHALGRSEKLYEAFILSQKQTLTPLTYNALIGACARNNDLEKALNLMSRMRQ 240

Query: 241 DGYQSDFVNYSLIIQSLTRTNKIDVPILQKLYEEIESDKIELDGQLLNDIILGFAKAGDP 300
           DG+QSDF+NYSLIIQSLTRTNKID+P+LQKLYEEIESDKIELDG LLNDIILGFAKAGDP
Sbjct: 241 DGFQSDFINYSLIIQSLTRTNKIDIPLLQKLYEEIESDKIELDGLLLNDIILGFAKAGDP 300

Query: 301 NRALYFLSMVQASGLNPKTSTFVAIISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNAL 360
           NRALYFLSMVQASGLNPKTSTFVA+ISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNAL
Sbjct: 301 NRALYFLSMVQASGLNPKTSTFVAVISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNAL 360

Query: 361 LKGYARKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNV 420
           LKGYARKGSLKEAESI+SEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNV
Sbjct: 361 LKGYARKGSLKEAESIISEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNV 420

Query: 421 QPNSFIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAME 480
           QPN+FIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAME
Sbjct: 421 QPNTFIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAME 480

Query: 481 TYDRMLSEGIEPDVVTWNTLIDCHCKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLG 540
           TYDRMLSEGIEPDVVTWNTLIDCH KHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLG
Sbjct: 481 TYDRMLSEGIEPDVVTWNTLIDCHRKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLG 540

Query: 541 EQEKWDEVKILLGKMQSQGLLPNVITYTTLVDIYGQSGRFNDAIECLEAMKSAGLKPSST 600
           EQEKWDEVKILLGKMQSQGLLPNV+TYTTLVDIYG SGRFNDAI+CLEAMKSAGLKPS+T
Sbjct: 541 EQEKWDEVKILLGKMQSQGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKSAGLKPSAT 600

Query: 601 MYNALINAFAQRLLAAEAGSPSDLEPMGLSEQAVNAYRVMRSDGLKPSLLALNSLINAFG 660
           MYNALINAFAQR               GLSEQAVNAYRVM SDGL+PSLLALNSLINAFG
Sbjct: 601 MYNALINAFAQR---------------GLSEQAVNAYRVMISDGLRPSLLALNSLINAFG 660

Query: 661 EDRRDIEAFSILQYMKENDVKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPDGK 720
           EDRRDIEAFSILQYMKENDVKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPDGK
Sbjct: 661 EDRRDIEAFSILQYMKENDVKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPDGK 720

Query: 721 ARAMLRSALRYMKRTLSL 733
           ARAMLRSALRYMKRTLSL
Sbjct: 721 ARAMLRSALRYMKRTLSL 720

[Close]
BLAST of CaUC08G148960 vs. ExPASy TrEMBL
Match: A0A6J1KKB7 (pentatricopeptide repeat-containing protein At5g42310, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111493938 PE=4 SV=1)

HSP 1 Score: 1299.6 bits (3362), Expect = 0.0e+00
Identity = 671/736 (91.17%), Postives = 692/736 (94.02%), Query Frame = 0 

Query: 1   MLLLSPLPLSTHFPATQFPSLTVFLHHQNPHLTTHLSFPFISAATATTS--SSLVTCYTS 60
           MLLLSPLPLST FPATQ PS TVFLHHQNP +TTHLSFP ISAA ATT+  SS+VTC TS
Sbjct: 1   MLLLSPLPLSTRFPATQLPSPTVFLHHQNPPITTHLSFPIISAAAATTASFSSVVTCSTS 60

Query: 61  SDALDLDLDVFENDPVFLQSRRYDFTPLLDFLTRSSAYPK--SDSEVEFNSTLNSGSDSD 120
           SDA  L+LDVFEND V  QSRRYDFTPLLDFL+RS AYPK  SDSEVEF+S L+S S+SD
Sbjct: 61  SDA--LELDVFENDHVSFQSRRYDFTPLLDFLSRSPAYPKSDSDSEVEFDSVLDSDSESD 120

Query: 121 TASPTSLDPTEFQLAEAYRAVPAPLWHSLLKSLCSSSSSIGLGYAVVSWLQKHNLCFSYE 180
            ASPTSLDPTEFQLAE YRAVPAPLWHSLLKSLC+SSSSIGLGYAVV WLQKHNLCFSYE
Sbjct: 121 KASPTSLDPTEFQLAETYRAVPAPLWHSLLKSLCASSSSIGLGYAVVLWLQKHNLCFSYE 180

Query: 181 LLYSILIHALGRSEKLYEAFILSQKQTLTPLTYNALIGACARNNDLEKALNLMSRMRQDG 240
           LLYSILIHALGRSEKLYEAFILSQ QTLTPLTYNALIGACARNND EKALNL+SRMRQDG
Sbjct: 181 LLYSILIHALGRSEKLYEAFILSQSQTLTPLTYNALIGACARNNDSEKALNLISRMRQDG 240

Query: 241 YQSDFVNYSLIIQSLTRTNKIDVPILQKLYEEIESDKIELDGQLLNDIILGFAKAGDPNR 300
           YQSDFVNYSLIIQSLTRTNKIDVPILQKLYEEIESDKIELDGQLLNDIILGFAKAGDPNR
Sbjct: 241 YQSDFVNYSLIIQSLTRTNKIDVPILQKLYEEIESDKIELDGQLLNDIILGFAKAGDPNR 300

Query: 301 ALYFLSMVQASGLNPKTSTFVAIISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALLK 360
           ALYFLSMVQASGLNPKTSTFVAIISALGN+GRTEEAEAIFEEMKEGGLKPRIKAFNALLK
Sbjct: 301 ALYFLSMVQASGLNPKTSTFVAIISALGNYGRTEEAEAIFEEMKEGGLKPRIKAFNALLK 360

Query: 361 GYARKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQP 420
           GYA+KGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVG W+SAR LLKQMEARNVQP
Sbjct: 361 GYAKKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGSWQSARQLLKQMEARNVQP 420

Query: 421 NSFIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETY 480
           N+FIFSRILASYRDRGEWQKTFEVLREMKN NVKPDRHFYNVMIDTFGKFNC+DHAMETY
Sbjct: 421 NTFIFSRILASYRDRGEWQKTFEVLREMKNCNVKPDRHFYNVMIDTFGKFNCVDHAMETY 480

Query: 481 DRMLSEGIEPDVVTWNTLIDCHCKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGEQ 540
           +RMLSEGIEPDVVTWNTLIDCH KHGYH+RAAELFEEMQERGY PCPTTYNIMINSLGEQ
Sbjct: 481 ERMLSEGIEPDVVTWNTLIDCHRKHGYHERAAELFEEMQERGYFPCPTTYNIMINSLGEQ 540

Query: 541 EKWDEVKILLGKMQSQGLLPNVITYTTLVDIYGQSGRFNDAIECLEAMKSAGLKPSSTMY 600
           EKWDEVKILLGKMQSQGLLPNVITYTTLVDIYGQSGRFNDAIECLEAMKSAGLKPSSTMY
Sbjct: 541 EKWDEVKILLGKMQSQGLLPNVITYTTLVDIYGQSGRFNDAIECLEAMKSAGLKPSSTMY 600

Query: 601 NALINAFAQRLLAAEAGSPSDLEPMGLSEQAVNAYRVMRSDGLKPSLLALNSLINAFGED 660
           NALINAFAQ+               GLSEQAVNAYRVMRSDGLKPSLLALNSLINAFGED
Sbjct: 601 NALINAFAQK---------------GLSEQAVNAYRVMRSDGLKPSLLALNSLINAFGED 660

Query: 661 RRDIEAFSILQYMKENDVKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPDGKAR 720
           RRDIEAF+ILQYMKENDVKPDVVTYTTLMKALIRV+KFDKVPAVYEEMILSGCTPDGKAR
Sbjct: 661 RRDIEAFTILQYMKENDVKPDVVTYTTLMKALIRVEKFDKVPAVYEEMILSGCTPDGKAR 719

Query: 721 AMLRSALRYMKRTLSL 733
           AMLRSAL+YMKRTLSL
Sbjct: 721 AMLRSALKYMKRTLSL 719

[Close]
BLAST of CaUC08G148960 vs. ExPASy TrEMBL
Match: A0A6J1G3R4 (pentatricopeptide repeat-containing protein At5g42310, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111450509 PE=4 SV=1)

HSP 1 Score: 1298.9 bits (3360), Expect = 0.0e+00
Identity = 670/736 (91.03%), Postives = 692/736 (94.02%), Query Frame = 0 

Query: 1   MLLLSPLPLSTHFPATQFPSLTVFLHHQNPHLTTHLSFPFISAATATTS--SSLVTCYTS 60
           MLLLSPLPLST FPATQ PS TVFLHHQNP +TTHLSFP ISAA ATT+  SS+VTC TS
Sbjct: 1   MLLLSPLPLSTRFPATQLPSPTVFLHHQNPPITTHLSFPIISAAAATTTSFSSVVTCSTS 60

Query: 61  SDALDLDLDVFENDPVFLQSRRYDFTPLLDFLTRSSAYPK--SDSEVEFNSTLNSGSDSD 120
           SDA  L+LDVFEND V  QSRRYDFTPLLDFL+RS AYPK  SDSEVEF+S L+S S+SD
Sbjct: 61  SDA--LELDVFENDHVSFQSRRYDFTPLLDFLSRSPAYPKSDSDSEVEFDSVLDSDSESD 120

Query: 121 TASPTSLDPTEFQLAEAYRAVPAPLWHSLLKSLCSSSSSIGLGYAVVSWLQKHNLCFSYE 180
            ASPTSLDPTEFQLAE YRAVPAPLWHSLLKSLC+SSSSIGLGYAVV WLQKHNLCFSYE
Sbjct: 121 KASPTSLDPTEFQLAETYRAVPAPLWHSLLKSLCASSSSIGLGYAVVLWLQKHNLCFSYE 180

Query: 181 LLYSILIHALGRSEKLYEAFILSQKQTLTPLTYNALIGACARNNDLEKALNLMSRMRQDG 240
           LLYSILIHALGRSEKLYEAFILSQ QTLTPLTYNALIGACARNND EKALNL+SRMRQDG
Sbjct: 181 LLYSILIHALGRSEKLYEAFILSQSQTLTPLTYNALIGACARNNDSEKALNLISRMRQDG 240

Query: 241 YQSDFVNYSLIIQSLTRTNKIDVPILQKLYEEIESDKIELDGQLLNDIILGFAKAGDPNR 300
           YQSDFVNYSLIIQSLTRTNKIDVPILQKLYEEIESDKIELDGQLLNDIILGFAKAGDPNR
Sbjct: 241 YQSDFVNYSLIIQSLTRTNKIDVPILQKLYEEIESDKIELDGQLLNDIILGFAKAGDPNR 300

Query: 301 ALYFLSMVQASGLNPKTSTFVAIISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALLK 360
           ALYFLSMVQASGLNPKTSTFVAIISALGN+GRTEEAEAIFEEMKEGGLKPRIKAFNALLK
Sbjct: 301 ALYFLSMVQASGLNPKTSTFVAIISALGNYGRTEEAEAIFEEMKEGGLKPRIKAFNALLK 360

Query: 361 GYARKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQP 420
           GYA+KGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVG W+SAR LLKQMEARNVQP
Sbjct: 361 GYAKKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGSWQSARQLLKQMEARNVQP 420

Query: 421 NSFIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETY 480
           N+FIFSRILASYRDRGEWQKTFEVLREMKN NVKPDRHFYNVMIDTFGKFNC+DHAMETY
Sbjct: 421 NTFIFSRILASYRDRGEWQKTFEVLREMKNCNVKPDRHFYNVMIDTFGKFNCVDHAMETY 480

Query: 481 DRMLSEGIEPDVVTWNTLIDCHCKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGEQ 540
           +RMLSEGIEPDVVTWNTLIDCH KHGYH+RAAELFEEMQERGY PCPTTYNIMINSLGEQ
Sbjct: 481 ERMLSEGIEPDVVTWNTLIDCHRKHGYHERAAELFEEMQERGYFPCPTTYNIMINSLGEQ 540

Query: 541 EKWDEVKILLGKMQSQGLLPNVITYTTLVDIYGQSGRFNDAIECLEAMKSAGLKPSSTMY 600
           EKWDEVK+LLGKMQSQGLLPNVITYTTLVDIYGQSGRFNDAIECLEAMKSAGLKPSSTMY
Sbjct: 541 EKWDEVKLLLGKMQSQGLLPNVITYTTLVDIYGQSGRFNDAIECLEAMKSAGLKPSSTMY 600

Query: 601 NALINAFAQRLLAAEAGSPSDLEPMGLSEQAVNAYRVMRSDGLKPSLLALNSLINAFGED 660
           NALINAFAQ+               GLSEQAVNAYRVMRSDGLKPSLLALNSLINAFGED
Sbjct: 601 NALINAFAQK---------------GLSEQAVNAYRVMRSDGLKPSLLALNSLINAFGED 660

Query: 661 RRDIEAFSILQYMKENDVKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPDGKAR 720
           RRDIEAF+ILQYMKENDVKPDVVTYTTLMKALIRV+KFDKVPAVYEEMILSGCTPDGKAR
Sbjct: 661 RRDIEAFTILQYMKENDVKPDVVTYTTLMKALIRVEKFDKVPAVYEEMILSGCTPDGKAR 719

Query: 721 AMLRSALRYMKRTLSL 733
           AMLRSAL+YMKRTLSL
Sbjct: 721 AMLRSALKYMKRTLSL 719

[Close]
BLAST of CaUC08G148960 vs. TAIR 10
Match: AT5G42310.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 990.7 bits (2560), Expect = 6.2e-289
Identity = 521/738 (70.60%), Postives = 602/738 (81.57%), Query Frame = 0 

Query: 1   MLLLSPLPLSTHFPATQFPSLTVFLHHQNPHLTTHLSF-PFISAATATTSSSLVTCYTSS 60
           MLLL   PL     +T+F SL    HH + H   H  F P ISA +ATTS+SL +   SS
Sbjct: 1   MLLLQQPPL----VSTRFHSLYFLTHHHHHH---HRFFQPPISAFSATTSASLPSPSPSS 60

Query: 61  DALDLD----LDVFENDPVFLQS---RRYDFTPLLDFLTRSSAYPKSDSEVEFNSTLNSG 120
            +        LD  E +     S   RRYDF+PLL FL+R          VE    L+S 
Sbjct: 61  SSSYFSSWNGLDTNEEEDNEFSSEVHRRYDFSPLLKFLSRF-------GPVEL--ALDSE 120

Query: 121 SDSDTASPTSLDPTEFQLAEAYRAVPAPLWHSLLKSLCSSSSSIGLGYAVVSWLQKHNLC 180
           S+S+ ASP SL+P EF L E+YRAVPAP WHSL+KSL SS+SS+GL YAVVSWLQKHNLC
Sbjct: 121 SESE-ASPESLNPVEFDLVESYRAVPAPYWHSLIKSLTSSTSSLGLAYAVVSWLQKHNLC 180

Query: 181 FSYELLYSILIHALGRSEKLYEAFILSQKQTLTPLTYNALIGACARNNDLEKALNLMSRM 240
           FSYELLYSILIHALGRSEKLYEAF+LSQKQTLTPLTYNALIGACARNND+EKALNL+++M
Sbjct: 181 FSYELLYSILIHALGRSEKLYEAFLLSQKQTLTPLTYNALIGACARNNDIEKALNLIAKM 240

Query: 241 RQDGYQSDFVNYSLIIQSLTRTNKIDVPILQKLYEEIESDKIELDGQLLNDIILGFAKAG 300
           RQDGYQSDFVNYSL+IQSLTR+NKID  +L +LY+EIE DK+ELD QL+NDII+GFAK+G
Sbjct: 241 RQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSG 300

Query: 301 DPNRALYFLSMVQASGLNPKTSTFVAIISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFN 360
           DP++AL  L M QA+GL+ KT+T V+IISAL + GRT EAEA+FEE+++ G+KPR +A+N
Sbjct: 301 DPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYN 360

Query: 361 ALLKGYARKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEAR 420
           ALLKGY + G LK+AES+VSEMEK G+SPDEHTY LL+DAY N GRWESAR +LK+MEA 
Sbjct: 361 ALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAG 420

Query: 421 NVQPNSFIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHA 480
           +VQPNSF+FSR+LA +RDRGEWQKTF+VL+EMK+  VKPDR FYNV+IDTFGKFNCLDHA
Sbjct: 421 DVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHA 480

Query: 481 METYDRMLSEGIEPDVVTWNTLIDCHCKHGYHDRAAELFEEMQERGYLPCPTTYNIMINS 540
           M T+DRMLSEGIEPD VTWNTLIDCHCKHG H  A E+FE M+ RG LPC TTYNIMINS
Sbjct: 481 MTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINS 540

Query: 541 LGEQEKWDEVKILLGKMQSQGLLPNVITYTTLVDIYGQSGRFNDAIECLEAMKSAGLKPS 600
            G+QE+WD++K LLGKM+SQG+LPNV+T+TTLVD+YG+SGRFNDAIECLE MKS GLKPS
Sbjct: 541 YGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPS 600

Query: 601 STMYNALINAFAQRLLAAEAGSPSDLEPMGLSEQAVNAYRVMRSDGLKPSLLALNSLINA 660
           STMYNALINA+AQR               GLSEQAVNA+RVM SDGLKPSLLALNSLINA
Sbjct: 601 STMYNALINAYAQR---------------GLSEQAVNAFRVMTSDGLKPSLLALNSLINA 660

Query: 661 FGEDRRDIEAFSILQYMKENDVKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPD 720
           FGEDRRD EAF++LQYMKEN VKPDVVTYTTLMKALIRVDKF KVP VYEEMI+SGC PD
Sbjct: 661 FGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPD 706

Query: 721 GKARAMLRSALRYMKRTL 731
            KAR+MLRSALRYMK+TL
Sbjct: 721 RKARSMLRSALRYMKQTL 706

[Close]
BLAST of CaUC08G148960 vs. TAIR 10
Match: AT5G65560.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 218.8 bits (556), Expect = 1.5e-56
Identity = 162/606 (26.73%), Postives = 279/606 (46.04%), Query Frame = 0 

Query: 193 YEAFILSQKQTLTPLTYNALIG-----------ACARNNDLEKALNLMSRMRQD-----G 252
           Y+  + S    LT L  N  +G           +C    D    L+L  +M +D      
Sbjct: 119 YKHSVYSYASLLTLLINNGYVGVVFKIRLLMIKSCDSVGDALYVLDLCRKMNKDERFELK 178

Query: 253 YQSDFVNYSLIIQSLTRTNKIDVPILQKLYEEIESDKIELDGQLLNDIILGFAKAGDPNR 312
           Y+     Y+ ++ SL R   +D   ++++Y E+  DK+  +    N ++ G+ K G+   
Sbjct: 179 YKLIIGCYNTLLNSLARFGLVDE--MKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEE 238

Query: 313 ALYFLSMVQASGLNPKTSTFVAIISALGN------------------------------H 372
           A  ++S +  +GL+P   T+ ++I                                   H
Sbjct: 239 ANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIH 298

Query: 373 G-----RTEEAEAIFEEMKEGGLKPRIKAFNALLKGYARKGSLKEAESIVSEMEKSGLSP 432
           G     R +EA  +F +MK+    P ++ +  L+K         EA ++V EME++G+ P
Sbjct: 299 GLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKP 358

Query: 433 DEHTYGLLVDAYANVGRWESARHLLKQMEARNVQPNSFIFSRILASYRDRGEWQKTFEVL 492
           + HTY +L+D+  +  ++E AR LL QM  + + PN   ++ ++  Y  RG  +   +V+
Sbjct: 359 NIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVV 418

Query: 493 REMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETYDRMLSEGIEPDVVTWNTLIDCHCKH 552
             M++  + P+   YN +I  + K N +  AM   ++ML   + PDVVT+N+LID  C+ 
Sbjct: 419 ELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRS 478

Query: 553 GYHDRAAELFEEMQERGYLPCPTTYNIMINSLGEQEKWDEVKILLGKMQSQGLLPNVITY 612
           G  D A  L   M +RG +P   TY  MI+SL + ++ +E   L   ++ +G+ PNV+ Y
Sbjct: 479 GNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMY 538

Query: 613 TTLVDIYGQSGRFNDAIECLEAMKSAGLKPSSTMYNALINAFA------QRLLAAEAGSP 672
           T L+D Y ++G+ ++A   LE M S    P+S  +NALI+         +  L  E    
Sbjct: 539 TALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVK 598

Query: 673 SDLEPM--------------GLSEQAVNAYRVMRSDGLKPSLLALNSLINAFGEDRRDIE 728
             L+P               G  + A + ++ M S G KP      + I  +  + R ++
Sbjct: 599 IGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLD 658

[Close]
BLAST of CaUC08G148960 vs. TAIR 10
Match: AT1G62670.1 (rna processing factor 2 )

HSP 1 Score: 215.7 bits (548), Expect = 1.2e-55
Identity = 141/550 (25.64%), Postives = 261/550 (47.45%), Query Frame = 0 

Query: 179 YSILIHALGRSEKLYEAFIL-SQKQTL----TPLTYNALIGACARNNDLEKALNLMSRMR 238
           +S L+ A+ +  K      L  Q Q L       TY+ LI    R + L  AL ++ +M 
Sbjct: 84  FSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMM 143

Query: 239 QDGYQSDFVNYSLIIQSLTRTNKIDVPILQKLYEEIESDKIELDGQLLNDIILGFAKAGD 298
           + GY+ + V  S ++     + +I   +   L +++     + +    N +I G      
Sbjct: 144 KLGYEPNIVTLSSLLNGYCHSKRISEAV--ALVDQMFVTGYQPNTVTFNTLIHGLFLHNK 203

Query: 299 PNRALYFLSMVQASGLNPKTSTFVAIISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNA 358
            + A+  +  + A G  P   T+  +++ L   G T+ A  +  +M++G L+P +  +N 
Sbjct: 204 ASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNT 263

Query: 359 LLKGYARKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARN 418
           ++ G  +   + +A ++  EME  G+ P+  TY  L+    N GRW  A  LL  M  R 
Sbjct: 264 IIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK 323

Query: 419 VQPNSFIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAM 478
           + P+ F FS ++ ++   G+  +  ++  EM   ++ P    Y+ +I+ F   + LD A 
Sbjct: 324 INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAK 383

Query: 479 ETYDRMLSEGIEPDVVTWNTLIDCHCKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSL 538
           + ++ M+S+   PDVVT+NTLI   CK+   +   E+F EM +RG +    TYNI+I  L
Sbjct: 384 QMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGL 443

Query: 539 GEQEKWDEVKILLGKMQSQGLLPNVITYTTLVDIYGQSGRFNDAIECLEAMKSAGLKPSS 598
            +    D  + +  +M S G+ PN++TY TL+D   ++G+   A+   E ++ + ++P+ 
Sbjct: 444 FQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI 503

Query: 599 TMYNALINAFAQRLLAAEAGSPSDLEPMGLSEQAVNAYRVMRSDGLKPSLLALNSLINAF 658
             YN +I    +                G  E   + +  +   G+KP ++A N++I+ F
Sbjct: 504 YTYNIMIEGMCK---------------AGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGF 563

Query: 659 GEDRRDIEAFSILQYMKENDVKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPDG 718
                  EA ++ + MKE+   P+   Y TL++A +R    +    + +EM   G   D 
Sbjct: 564 CRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDA 616

Query: 719 KARAMLRSAL 724
               ++ + L
Sbjct: 624 STIGLVTNML 616

[Close]
BLAST of CaUC08G148960 vs. TAIR 10
Match: AT2G31400.1 (genomes uncoupled 1 )

HSP 1 Score: 213.0 bits (541), Expect = 8.0e-55
Identity = 149/554 (26.90%), Postives = 249/554 (44.95%), Query Frame = 0 

Query: 210 NALIGACARNNDLEKALNLMSRMRQDGYQSDFVNYSLIIQSLTRTNKIDVPILQKLYEEI 269
           +AL  A   + D E   +LM         SD   Y  II+ L   N+ D  +    +   
Sbjct: 167 DALQNAIDFSGDDEMFHSLMLSFESKLCGSDDCTY--IIRELGNRNECDKAVGFYEFAVK 226

Query: 270 ESDKIELDGQLLNDIILGFAKAGDPNRALYFLSMVQASGLNPKTSTFVAIISALGNHGRT 329
              +    G+L + +I    + G    A        A G       F A+ISA G  G  
Sbjct: 227 RERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLH 286

Query: 330 EEAEAIFEEMKEGGLKPRIKAFNALLKGYARKG-SLKEAESIVSEMEKSGLSPDEHTYGL 389
           EEA ++F  MKE GL+P +  +NA++    + G   K+      EM+++G+ PD  T+  
Sbjct: 287 EEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNS 346

Query: 390 LVDAYANVGRWESARHLLKQMEARNVQPNSFIFSRILASYRDRGEWQKTFEVLREMKNSN 449
           L+   +  G WE+AR+L  +M  R ++ + F ++ +L +    G+    FE+L +M    
Sbjct: 347 LLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKR 406

Query: 450 VKPDRHFYNVMIDTFGKFNCLDHAMETYDRMLSEGIEPDVVTWNTLIDCHCKHGYHDRAA 509
           + P+   Y+ +ID F K    D A+  +  M   GI  D V++NTL+  + K G  + A 
Sbjct: 407 IMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEAL 466

Query: 510 ELFEEMQERGYLPCPTTYNIMINSLGEQEKWDEVKILLGKMQSQGLLPNVITYTTLVDIY 569
           ++  EM   G      TYN ++   G+Q K+DEVK +  +M+ + +LPN++TY+TL+D Y
Sbjct: 467 DILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGY 526

Query: 570 GQSGRFNDAIECLEAMKSAGLKPSSTMYNALINAFAQRLLAAEAGSPSDLEPMGLSEQAV 629
            + G + +A+E     KSAGL+    +Y+ALI+A  +                GL   AV
Sbjct: 527 SKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKN---------------GLVGSAV 586

Query: 630 NAYRVMRSDGLKPSLLALNSLINAFG------------------------------EDRR 689
           +    M  +G+ P+++  NS+I+AFG                              E  R
Sbjct: 587 SLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETEGNR 646

Query: 690 DIEAF--------------------------SILQYMKENDVKPDVVTYTTLMKALIRVD 707
            I+ F                           + + M + ++KP+VVT++ ++ A  R +
Sbjct: 647 VIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCN 703

[Close]
BLAST of CaUC08G148960 vs. TAIR 10
Match: AT3G22470.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 211.5 bits (537), Expect = 2.3e-54
Identity = 138/523 (26.39%), Postives = 243/523 (46.46%), Query Frame = 0 

Query: 192 LYEAFILSQKQTLTPLTYNALIGACARNNDLEKALNLMSRMRQDGYQSDFVNYSLIIQSL 251
           L+E+ I S +   TP+ +N L  A AR    +  L     M  +G + D    +++I   
Sbjct: 57  LFESMIQS-RPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCY 116

Query: 252 TRTNKI--DVPILQKLYEEIESDKIELDGQLLNDIILGFAKAGDPNRALYFLSMVQASGL 311
            R  K+     +L + ++       E D    + ++ GF   G  + A+  +  +     
Sbjct: 117 CRKKKLLFAFSVLGRAWKL----GYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQ 176

Query: 312 NPKTSTFVAIISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALLKGYARKGSLKEAES 371
            P   T   +I+ L   GR  EA  + + M E G +P    +  +L    + G+   A  
Sbjct: 177 RPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALD 236

Query: 372 IVSEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQPNSFIFSRILASYR 431
           +  +ME+  +      Y +++D+    G ++ A  L  +ME + ++ +   +S ++    
Sbjct: 237 LFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLC 296

Query: 432 DRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETYDRMLSEGIEPDVV 491
           + G+W    ++LREM   N+ PD   ++ +ID F K   L  A E Y+ M++ GI PD +
Sbjct: 297 NDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTI 356

Query: 492 TWNTLIDCHCKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGEQEKWDEVKILLGKM 551
           T+N+LID  CK      A ++F+ M  +G  P   TY+I+INS  + ++ D+   L  ++
Sbjct: 357 TYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREI 416

Query: 552 QSQGLLPNVITYTTLVDIYGQSGRFNDAIECLEAMKSAGLKPSSTMYNALINAFAQRLLA 611
            S+GL+PN ITY TLV  + QSG+ N A E  + M S G+ PS   Y  L++        
Sbjct: 417 SSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDN--- 476

Query: 612 AEAGSPSDLEPMGLSEQAVNAYRVMRSDGLKPSLLALNSLINAFGEDRRDIEAFSILQYM 671
                       G   +A+  +  M+   +   +   N +I+      +  +A+S+   +
Sbjct: 477 ------------GELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSL 536

Query: 672 KENDVKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPD 713
            +  VKPDVVTY  ++  L +     +   ++ +M   GCTPD
Sbjct: 537 SDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPD 559

The following BLAST results are available for this feature:
BLAST of CaUC08G148960 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038883964.10.0e+0095.51pentatricopeptide repeat-containing protein At5g42310, chloroplastic isoform X1 ... [more]
XP_008464858.10.0e+0092.54PREDICTED: pentatricopeptide repeat-containing protein At5g42310, mitochondrial ... [more]
KAA0038458.10.0e+0092.54pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa][more]
XP_004144287.10.0e+0092.01pentatricopeptide repeat-containing protein At5g42310, chloroplastic [Cucumis sa... [more]
XP_022999638.10.0e+0091.17pentatricopeptide repeat-containing protein At5g42310, chloroplastic [Cucurbita ... [more]
BLAST of CaUC08G148960 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8L8448.7e-28870.60Pentatricopeptide repeat-containing protein At5g42310, chloroplastic OS=Arabidop... [more]
A0A1D6IEG98.1e-19352.95Pentatricopeptide repeat-containing protein CRP1, chloroplastic OS=Zea mays OX=4... [more]
Q84ZD25.8e-19153.20Pentatricopeptide repeat-containing protein CRP1 homolog, chloroplastic OS=Oryza... [more]
B8Y6I04.2e-5625.37Pentatricopeptide repeat-containing protein 10, chloroplastic OS=Zea mays OX=457... [more]
Q76C995.4e-5625.86Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=Rf1 PE=2 SV... [more]
BLAST of CaUC08G148960 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3CMJ20.0e+0092.54pentatricopeptide repeat-containing protein At5g42310, mitochondrial OS=Cucumis ... [more]
A0A5A7T6H70.0e+0092.54Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A0A0KCZ60.0e+0092.01Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G358090 PE=4 SV=1[more]
A0A6J1KKB70.0e+0091.17pentatricopeptide repeat-containing protein At5g42310, chloroplastic OS=Cucurbit... [more]
A0A6J1G3R40.0e+0091.03pentatricopeptide repeat-containing protein At5g42310, chloroplastic OS=Cucurbit... [more]
BLAST of CaUC08G148960 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G42310.16.2e-28970.60Pentatricopeptide repeat (PPR-like) superfamily protein [more]
AT5G65560.11.5e-5626.73Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G62670.11.2e-5525.64rna processing factor 2 [more]
AT2G31400.18.0e-5526.90genomes uncoupled 1 [more]
AT3G22470.12.3e-5426.39Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 360..476
e-value: 1.2E-29
score: 105.7
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 616..730
e-value: 9.4E-21
score: 76.0
coord: 261..359
e-value: 6.0E-20
score: 73.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 121..260
e-value: 2.4E-13
score: 52.0
coord: 477..548
e-value: 6.1E-21
score: 76.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 549..615
e-value: 7.1E-16
score: 60.5
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 292..582
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 348..395
e-value: 1.8E-11
score: 44.1
coord: 486..533
e-value: 2.2E-16
score: 59.8
coord: 644..689
e-value: 4.5E-10
score: 39.6
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 208..238
e-value: 4.6E-7
score: 27.6
coord: 489..521
e-value: 1.7E-10
score: 38.4
coord: 350..383
e-value: 4.6E-8
score: 30.7
coord: 315..346
e-value: 2.2E-7
score: 28.6
coord: 421..452
e-value: 0.0014
score: 16.6
coord: 647..678
e-value: 3.4E-4
score: 18.6
coord: 559..592
e-value: 8.7E-8
score: 29.9
coord: 679..712
e-value: 5.4E-8
score: 30.5
coord: 525..558
e-value: 3.9E-6
score: 24.7
coord: 456..488
e-value: 1.6E-7
score: 29.1
coord: 384..417
e-value: 1.2E-6
score: 26.3
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 545..605
e-value: 9.4E-12
score: 44.8
coord: 405..465
e-value: 2.6E-8
score: 33.8
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 208..236
e-value: 2.8E-7
score: 30.3
coord: 315..343
e-value: 2.5E-6
score: 27.3
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 452..486
score: 11.32308
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 557..591
score: 12.441133
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 522..556
score: 10.533867
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 487..521
score: 14.578587
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 382..416
score: 12.254791
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 417..451
score: 10.084454
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 347..381
score: 12.167101
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 205..239
score: 11.608074
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 312..346
score: 12.199985
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 642..676
score: 9.185627
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 677..711
score: 11.575191
NoneNo IPR availablePANTHERPTHR47942TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATEDcoord: 120..731
NoneNo IPR availablePANTHERPTHR47942:SF23PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN CRP1 HOMOLOG, CHLOROPLASTICcoord: 120..731

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC08G148960.1CaUC08G148960.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010239 chloroplast mRNA processing
biological_process GO:0009658 chloroplast organization
cellular_component GO:0042644 chloroplast nucleoid
cellular_component GO:0042651 thylakoid membrane
molecular_function GO:0003729 mRNA binding
molecular_function GO:0005515 protein binding
molecular_function GO:0003727 single-stranded RNA binding