CaUC08G147160 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGGAAGAAAAACCAAAGAAGGGGAAAAATTTAGCAACTCAAGTTTTAGAGCATGCAAAGTGGTGGTTTTGTTGGGGTGTGAAAGAAGGAAAAGCAATTCCTAAAGATGTTCCAAAGGGTCATTTTGTAGTGTATGTGGGTGAAGAATGGAAGAGATATGTTATTGAGATTGGAGTGTTGAAACATCCTTTGTTTAAGATATTACTTGATTCTGCTGAGGAAATGTTTGGATTTGCTAATGCTTCAAAACTATATTTACCTTGTAAGGAGTGTGTTTTTGTTGGAATTCTTCAATGTCTAGATTCTTCTTCTTCTTTGTAG ATGATGGAAGAAAAACCAAAGAAGGGGAAAAATTTAGCAACTCAAGTTTTAGAGCATGCAAAGTGGTGGTTTTGTTGGGGTGTGAAAGAAGGAAAAGCAATTCCTAAAGATGTTCCAAAGGGTCATTTTGTAGTGTATGTGGGTGAAGAATGGAAGAGATATGTTATTGAGATTGGAGTGTTGAAACATCCTTTGTTTAAGATATTACTTGATTCTGCTGAGGAAATGTTTGGATTTGCTAATGCTTCAAAACTATATTTACCTTGTAAGGAGTGTGTTTTTGTTGGAATTCTTCAATGTCTAGATTCTTCTTCTTCTTTGTAG ATGATGGAAGAAAAACCAAAGAAGGGGAAAAATTTAGCAACTCAAGTTTTAGAGCATGCAAAGTGGTGGTTTTGTTGGGGTGTGAAAGAAGGAAAAGCAATTCCTAAAGATGTTCCAAAGGGTCATTTTGTAGTGTATGTGGGTGAAGAATGGAAGAGATATGTTATTGAGATTGGAGTGTTGAAACATCCTTTGTTTAAGATATTACTTGATTCTGCTGAGGAAATGTTTGGATTTGCTAATGCTTCAAAACTATATTTACCTTGTAAGGAGTGTGTTTTTGTTGGAATTCTTCAATGTCTAGATTCTTCTTCTTCTTTGTAG MMEEKPKKGKNLATQVLEHAKWWFCWGVKEGKAIPKDVPKGHFVVYVGEEWKRYVIEIGVLKHPLFKILLDSAEEMFGFANASKLYLPCKECVFVGILQCLDSSSSL Homology
BLAST of CaUC08G147160 vs. NCBI nr
Match: KAA0036482.1 (auxin-induced protein X15-like [Cucumis melo var. makuwa] >TYK00007.1 auxin-induced protein X15-like [Cucumis melo var. makuwa]) HSP 1 Score: 172.2 bits (435), Expect = 2.5e-39 Identity = 86/110 (78.18%), Postives = 95/110 (86.36%), Query Frame = 0
BLAST of CaUC08G147160 vs. NCBI nr
Match: KGN48091.2 (hypothetical protein Csa_004000 [Cucumis sativus]) HSP 1 Score: 168.3 bits (425), Expect = 3.6e-38 Identity = 86/110 (78.18%), Postives = 95/110 (86.36%), Query Frame = 0
BLAST of CaUC08G147160 vs. NCBI nr
Match: XP_004149915.1 (auxin-induced protein 15A [Cucumis sativus]) HSP 1 Score: 168.3 bits (425), Expect = 3.6e-38 Identity = 86/110 (78.18%), Postives = 95/110 (86.36%), Query Frame = 0
BLAST of CaUC08G147160 vs. NCBI nr
Match: XP_022959679.1 (auxin-induced protein 15A-like [Cucurbita moschata] >KAG6602309.1 Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 141.4 bits (355), Expect = 4.7e-30 Identity = 71/105 (67.62%), Postives = 81/105 (77.14%), Query Frame = 0
BLAST of CaUC08G147160 vs. NCBI nr
Match: XP_022134179.1 (indole-3-acetic acid-induced protein ARG7-like [Momordica charantia]) HSP 1 Score: 135.2 bits (339), Expect = 3.3e-28 Identity = 69/104 (66.35%), Postives = 79/104 (75.96%), Query Frame = 0
BLAST of CaUC08G147160 vs. ExPASy Swiss-Prot
Match: P0DKL1 (Auxin-responsive protein SAUR50 OS=Helianthus annuus OX=4232 PE=3 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 7.0e-13 Identity = 32/72 (44.44%), Postives = 44/72 (61.11%), Query Frame = 0
BLAST of CaUC08G147160 vs. ExPASy Swiss-Prot
Match: O65695 (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 1.6e-12 Identity = 34/61 (55.74%), Postives = 40/61 (65.57%), Query Frame = 0
BLAST of CaUC08G147160 vs. ExPASy Swiss-Prot
Match: Q9SL45 (Protein SMALL AUXIN UP-REGULATED RNA 10 OS=Arabidopsis thaliana OX=3702 GN=SAUR10 PE=2 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 2.5e-10 Identity = 31/65 (47.69%), Postives = 40/65 (61.54%), Query Frame = 0
BLAST of CaUC08G147160 vs. ExPASy Swiss-Prot
Match: P32295 (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 GN=ARG7 PE=2 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 9.5e-10 Identity = 32/68 (47.06%), Postives = 41/68 (60.29%), Query Frame = 0
BLAST of CaUC08G147160 vs. ExPASy Swiss-Prot
Match: P33081 (Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 1.6e-09 Identity = 32/67 (47.76%), Postives = 41/67 (61.19%), Query Frame = 0
BLAST of CaUC08G147160 vs. ExPASy TrEMBL
Match: A0A5D3BLH1 (Auxin-induced protein X15-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold360G00520 PE=3 SV=1) HSP 1 Score: 172.2 bits (435), Expect = 1.2e-39 Identity = 86/110 (78.18%), Postives = 95/110 (86.36%), Query Frame = 0
BLAST of CaUC08G147160 vs. ExPASy TrEMBL
Match: A0A0A0KJ86 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G405980 PE=3 SV=1) HSP 1 Score: 168.3 bits (425), Expect = 1.7e-38 Identity = 86/110 (78.18%), Postives = 95/110 (86.36%), Query Frame = 0
BLAST of CaUC08G147160 vs. ExPASy TrEMBL
Match: A0A6J1H8T2 (auxin-induced protein 15A-like OS=Cucurbita moschata OX=3662 GN=LOC111460683 PE=3 SV=1) HSP 1 Score: 141.4 bits (355), Expect = 2.3e-30 Identity = 71/105 (67.62%), Postives = 81/105 (77.14%), Query Frame = 0
BLAST of CaUC08G147160 vs. ExPASy TrEMBL
Match: A0A6J1BY27 (indole-3-acetic acid-induced protein ARG7-like OS=Momordica charantia OX=3673 GN=LOC111006505 PE=3 SV=1) HSP 1 Score: 135.2 bits (339), Expect = 1.6e-28 Identity = 69/104 (66.35%), Postives = 79/104 (75.96%), Query Frame = 0
BLAST of CaUC08G147160 vs. ExPASy TrEMBL
Match: A0A0L9TZ85 (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan02g187200 PE=3 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 1.6e-20 Identity = 46/84 (54.76%), Postives = 64/84 (76.19%), Query Frame = 0
BLAST of CaUC08G147160 vs. TAIR 10
Match: AT2G37030.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 103.6 bits (257), Expect = 1.0e-22 Identity = 43/77 (55.84%), Postives = 60/77 (77.92%), Query Frame = 0
BLAST of CaUC08G147160 vs. TAIR 10
Match: AT3G53250.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 91.7 bits (226), Expect = 4.0e-19 Identity = 39/76 (51.32%), Postives = 60/76 (78.95%), Query Frame = 0
BLAST of CaUC08G147160 vs. TAIR 10
Match: AT2G21220.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 77.0 bits (188), Expect = 1.0e-14 Identity = 35/61 (57.38%), Postives = 42/61 (68.85%), Query Frame = 0
BLAST of CaUC08G147160 vs. TAIR 10
Match: AT1G19830.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 74.7 bits (182), Expect = 5.0e-14 Identity = 34/69 (49.28%), Postives = 45/69 (65.22%), Query Frame = 0
BLAST of CaUC08G147160 vs. TAIR 10
Match: AT5G20810.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 74.7 bits (182), Expect = 5.0e-14 Identity = 32/70 (45.71%), Postives = 47/70 (67.14%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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