CaUC08G146900 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC08G146900
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Pectin lyase-like superfamily protein
Location	Ciama_Chr08: 18026991 .. 18043807 (+)
RNA-Seq Expression	CaUC08G146900
Synteny	CaUC08G146900

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAGAGGAAGCTGTGTCAGAGATTTTAGACAAGCAGGAACCATCCAGGAAGTCTGTTGGTTCCCATGTTCTTCATGGTGATCACTTATCCGTGGTAGTGCTGATTTCAGTAAGTTTTTGTTTTTTGTAATTTTCTTTTCACATGGATGAGCTTCAATTTTTAGCACTTTTTGTTGCTTTTTCACTGTATTGCCCTTAGATTTTTGTTACTATTTCACTCTGTTCCTATCGTGGCTTTTTCTCTCTATATGAACAATTTTTTTGGGATATTTCATTACTGTTGAGTATTTAGAACGAAGCTTTTGATTAGGGGCTTTTGCCATAAGAGCTCTCTTTTTATTATTCATTGCTCTCACGAGAGCAGCAAGAAAAGTCTGGTTTATCTTAGATCCAAGTCTGTTCCACACATATATATATATATATATTTTGAGCTCTAACAATTTCAGGGGTAAGTATCAAACCATGGACTTCTGAGGTGGTAATTGATATTTGATCGACTGAACTAGACTCGAACGGTCCAAATATGCTCGGTATGGGAGAGGTTTCTAATAATGAGTTTTCACATAGGTATAGAAACTAAACTAAATTGTACATTCCCCTTGCGTGTCATGATAGATGTGGCTAGTGAGAGCCATATCTCTTCCAATTTGAGACGTGAAATATTTAAATTATACAAAATGTTCTTGAACTGTCATTTCAAAATTTGTATTTTCATCCCTTAACCTTTCATTTTAAAATGAAGAAAAAGATTGTGATAATAGTGAACAGTAAAATTAGTCAGGTATGTGGACATAGGTGGTAGACTTCAATTTGTGTTTTTAAACGAAATTTTAATTATACTCTTGTAGGTTTAAAGTTCTTTTTTAATTATCATTATTACTCTAAAATTACCAAAAAAACGACATTTTGCTCATTTCTACTAAAATAAAGAGAATATCATTGAGTTTTGGCTAAGTGGTATTACTATTAGTAAACATATAGTAAAATATGATACACATTTGTATGATTTGAAAATAATAAAACTCGTAACTTCAAGCACAAGTTTTTATTTTTTATTTTTTATTATCATTGAAAAAATGAAAGCAAAAAAAGATTATAGTTTAAATTTAAACTCAGGATGAAATAATGATTTAGAAAATACAATAATGGAAACCTCAAAATGTCAATGAACGATATATATATTTAATATTTATTATAGAAAAAAGAAATTAAAAAGGCACGAAATAGCTCCCAACGAGATTTGAACTTGGGTTACTGGATTCAGAGTCTAATGACCTAACCACTAGACCATGGAACCTTGTTTGGATTGCCCAGCATTATTAATAATATATTAAATTAGAAATTAAGAGATTATAATTTTTGGTTCAAGGAAAAAAGTCTTTTGAGGACAGAATGGTTCTATTTCAACTTCAGATTTAAGAATAACAATTTGTAACCTCAAATTTCTAAGAATTGAAAAATGAAAGGCAAAGAATAAAAAAAGAATAAATATTTGAGGTTCCACCGAGATTTGAACTCGGGTTACTGGATTCAGAGTCCAATGTCCTCACCACTAGACCATGGAACCATTTTGAAAATAAAATCTATTAATTACGTTATTATTTAATATTAAAACTAACTTCTTCAGGGACAAAAATGGTAAATCACAAGTTTCATCATTTAAACTTTTAATTTTGTTTATTTGATTCCTAAATTTTATAAAATATCTAATAAGTTCTTTGAGCTTTCAATTTTGTGTCCTATGGAGTTTAAGAAGTTTCAAATATGTCAATCTACTAGCACAAAATTGATCACCAAATCTCAAAATACTAAGGTCCCATTTGGTAACCATTTCGTTTTTTAAAATCAAGCCTATTTTCGTCTCGTTTCTTACATTGGTTTGCATCTCTCTTAAGCACAATAATTAAACTCTTTGCCAAATTCAAAAAACAAAAGCAAATTTTTAAAAGCTATATTTTTTTTTTTAGTTTTCAAATTTTGGCTTGAGTTTTTAAACTATTGGTAAAAAGTAAATAATAAGTTGATTATTCAGTTAAGACACTACAAAAAGGAAACAGAAAAAAAAAAGAGATTGTTATGAGGTCACTTTACGCTAGTTTATCTCATGGAAGATCTGTTTGAAAAAAATATATATACTTCAGTTCAGAGATCTTAAAGATTGATGAAATTATGTAGAGTTATGGCAGTTTAGGAATAAAAGTATATATATGATTAAGCCAAGGAATAAAATAGTATAGACAAGAATTCATCAAGGGCTAGTGTTGTGTTTTGTATTAGGTATTGAGCTTGGTGGTAGTACACGAAATTCCTTCCTAAGACACCTATTTAAGGGCAAGATTAAGGATCTTTTGAAGATAGGGAGGAGAAAAGAAAAGATTATAGTTTTATTAAAGGCTGCTAGACATTAAGTCAATTGTCTCAAGAAAATTTTTGAAAGGGTTATTAAGACATGATTACATTTTGTGGTACTAAAGATTGGTAGTTTGATTAAGGTGTGTTTTGGCTCTTCGGATAACATGCCTAAAAAGGAAAAAAATGTATGTATAAGGGGATAAGGCATCCCAAGGAATTTCTAGCTATTGGAGTTGGTGCCTCTTATATGAAAACTCTTGAGGGTTTAATATGAGAATATTACTATTGTAGAGTTTAAGATTGATGGACTGCATGAAGTATTTTGGTTATTCATGTGTAGTACTCGAAGAGTGAAAATGTTCAAGCTGGAAAGTAACTGACTTCATGTGAGGAAACTTTTCTAAAGAATACCTTGTTTAGTTGGTGTGATGTGGAAAGAAGCTAGTTTGAACAGGACTTGAGATTTAGAAAATTATAAAAAAAAAAAAATGTGGCTTTTGAACTAAAGAGTTAAACTTAAGAAGTACCTCAAGGTACTTAGGTACCCATACCATGGTCAAGATGAAAAGAATTTAGTTAAGCTAAAGAGACCACTAGAGAAACTTTTGGAGTTAAAAGGCAATGAAAATTGGTGAAGGAGAATTCTACAACATGAAAATTTAGTTGAGAAGGTAAGACTTATGGAGGAGGTAAGCAGAGCTACACCTTGTGTAGTGAGTTTGTGTTACACTTGGAAAGGAAAGAAGAGCACCTTAACTGTTGGTCTTAAAGAAAAGTGTTTAAGGAAGGTGACTACTTTGGAAAAAAAGGAAATTAATGTTTTCAAAACTTCAAAGTACTTGAATATGGTTTGGATTGAAGACATGATATGAGTGGTTACTAGGTGTTGGTTTTGGTGTAAAAGAAGAGTCTCTCAATACCATTTGGAACTTTGGACCTCACTATGTGGTGGTGTATAAATCACGTAAAATATTGGTTGTGAAACTCAGTTTCAATGACAAAGTCTTTTTCTAAAATAAAAGGGGTAAAGAGAGATGGACTAAAGTGGAGTTGTTAGTAGCAATGGTTGTTCAGAAGCTATTGACTTGGAATGTTGAGACTTTAATAGCCAAAAGGGTGCACCATTGAAAGTATTAATGAAAGTTCGGGGATTATGACTTTGGATACAGTTATTCTGAGGTTATTGAGATGTGTTTTAGATTGAAAAACTCACAAGCTAAAAAACTCGGTTATCGAGAGCGAGCGAGACAACAAGAAAGTCAACAATATATATATATATATATATATATATATATATATATATATATATATATAAAACTAATGTTATATATCAATGGGTAGGTATCAGCTATTCGAGGTCAAGGTTGGGGGGATATCCTCCCCGTCCCCCTCCTCCTCCCTGGACGGGTACTCGAAAATTGTCTCCGGTTTGACCCTATCCCTAGTCAAACCAGGTATTCTCCGACCCGATCGGGTCGAGCCCCACAGTTTTTTTTTCCAATCCTAAAAGAGAGCGCACGTGTCACGAATGAGAACAAGAAAGGAAAAGAAAACTTGATTTCTTTATTTTATTTTTTTAATTTTGCCCGCATTTCAAGAAACCTAATATATATATATATATATATATTTTATTTCAATTTTCTTCCTATTTAAATTTATTGAGACATATAAAATAAGATATCTTTTAAGATAATTTGATATGAAATATAATTTTTAATTTTGAACTTTCCCTTTTAATTTTAATAAATTTCTTACCCCTAATTTCTAAACCTTTAATTAAATGACACATAATTACAATTTCATTTATATATTTAGTTTATTAAAGAAACCTTTCTAAAATTATATGCGGCTTTAAAACTGGCCACTTGTTTCTGTTTAATTTTTTCCCACAAAACTATTTTTATCCCAGAGATAAATTTTTGGAACAACCTTTGATCGGGAAGAGTGAACGGCAGTGCATGTTTTTAGTTATGAATGGAGTGTCATACTTTGACAAAGTTGTATACTTAGTTGTGCTTAATTAAAGGAGAAAACTAATTATAGAAGAAATTGATTGAGGTTCGGTTTCTTTGTTTCATTATAAATACTTTGATTGCAATTAAAATACCCACACTTTCTATTCAAACACAAAATTATTCAAGTGGAAAAAAAAAAGAAAAGAAAAGAAAAAAAGAGAATATAAACATATATAAAGAAGAAGAAAAGATGCATACAACATTAAACTTTGTGGCTCTATCATTGATATTGTTTTTTGTGTCTAGAGGACAATCGCAAGCTAGTGATGGTGTTTTCGATGTGACAAAGTACGGTGCTGTGCCTGATGCTGATATATCTCAGGTAAACAAATCTTTTGTTTTTAATTATCATCGATTAAAAGAAAAACATCTTGTGGCATCAATCAAAAAAAAAAAAAATTTTAACTATATTTTAAAAATTAAATAGGCTTTAAAAGATGCCTGGAAGGAAGCTTGTGCATCAACCACTCAAAGCAAATTAGTTATTCCAAAAGCAACTTACAAATTAAGTGCAGTTGAGTTGGTGGGCCCTTGCAAAAGCCCTATCGAAATTCAACTTCAAGGAACATTGCAGGCACCACCGGATCTAACGGGAGATGGATGGGTTAGTTTCAGATATATCGATTACTTTACGTTAACAGGTGGTGGCGTTTTGGATGGGCAAGGAAAAGCAGCTTGGGAAAAGAATGATTGTCATAAAAATACAAAGTGCGATCCAATTCCCATGGTAAGCACGATTTGATCATCTAATAAACATTTTTAGTAGTGTTGACGTATATATTATTTAATTTATAATTGTTATAATTTTAACTGTCAAAGTAACATTTATATTTTCTCTTTTTTAAGTAAATATACATAAGCATGATAATTTCTTTTTGTTAAAAAATGCAGACTTTGAAATTAAGCTTTATCTCAAATGGGATAGTGAGTGATGTAACCTCTAAAGATAGCAAAAATTTTCATGTCAATGTATTGGGTTGTAAGAACCTCACCTTCCAACATTTCACCATAAATGCACCAGAAACTAGTATTAATACCGATGGAATCCATATTGGCCGCTCTGTTGGGATTAACGTCCTTAATACAAACATTGCTACTGGAGATGATTGCATCTCACTTGGGGACGGGAGTAAGCAAGTAACAATTACGAATGTGACATGTGGGCCTGGACATGGTATAAGTGTAGGAAGCCTAGGAAGATACAATGCTGAAGAACCAGTAGAGGGAATCATAGTTAAGAATTGTACATTAATGAATACATCAAATGGCGTTAGAATCAAAACATGGCCAGCTTCTCCTGCTGCTGGAACGGCTTCTGATATGCACTATGAAGATATAATTATGGTCAACGTCAGCAATCCAGTTCTCATAGATCAAGAGTATTGTCCATACAACCAATGTAATAAAAAGGTACTAAAGTTATTAAGCTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTCTTGTTTTGGTTATTAACTTTCTTCCTATGTTTCAAAAATCAAGCAAAAATTTGAAAACTAAAAAAAGTAGTTTTTGTTTTTAAATTTGAGTAAGAATTCAAGCGTTTCTTTAAGTATTTAGGAAGAAAAAATGATAGAGTTTAGAAAGTAAAAGCTAAAAACAAATTTGTTATCAAATGGGGCCTTGGATTTCTGATTTCAAGTTTTTGAAAATTATGCTTATAAACATTTTCTCTAAATATGATTTCTTTGTTTTGTTTACTACTTTTTATGAGCTTTTTAAAAAACCAAGCCAATTTTAGGAGAAAAAAAAATAGCTTTTACATATAGTGGAAGTGAAGGCCCAATTACATCCCAATGTTTAAATGTGAAGCCCACAATTTCTGGAAACCAAAACCCTCCTACTTGTTATTCTGTTTCTCCTTGTGCATCTCCACCAACTTAAGCTACGACTGTTATTTTTGTAATTGCATAAAATTATAGCACCCAAGTTTTTATAAAGAAACCTTGTGGTGACCAAATGTTTTTCCTTTATTGTATTAAAAAAAATGAAGAGATGTATCCTTATGCCTAAATAATATTTATTTTGATCCATTGATTAATCCAAAAACGTCTTCCCTAGGAACAATTTTTTTCTAGTAAGGGAAAGGACATTTTGGCAAATGACAGAAGAAAACTTTGACCGTGCCATTGGGATTAGACTAATGCTTCCATACCAGTTTTCATGTTTTCCTTTCGTTTTATTACTTGGGATTTGTTAGTGAAACTAAAACTATGTTTTCCTTTCTTCATTACTTTATGCCAAATTTTCCTATTTTAATACAATAATATTTTAGGGATACTCCAACTAAAGGCTTTTGGTTATCAAACGTCGGCACATTTATTTACCTTAATAAAGTTTCTTTTGTTTTTTGCAAATAATATGGAAAATATGTCGTTTGAGTTGTATGCATGTGCATAAGTGATGGCCTAGCTTGAATCCTAGGGAGTTGGGTTGTTACAATTTTCCTAAATTCTAATATAGTCAAATTGACGGATGATTTATCCACTTATTTTATGGGGTCATGACTTTAAATATTGGAGAAATAATAAGTAAAGTAAGAGATTATTTTAAATGTTTTTTTTCTTCTTTAAAGAATAATTTCAATTCAAGATTTAAATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN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GGTGCCCAATCATACCGTAAAAAAGATTGGTGGCGACTTCTTTTGTTTTTTTTTCCTTTTATTTTTTGTTATTTTATCCCTTTTTAAGGACATTGACCGCTCCGCGTCATCTCGGGCATATGGCGATAGTTAATTTTGGATCCTTAGTGGAACAATAGTCGTACTTAAATTTTCTTATATTATAACTTGACCCGTGCACATGTGGCTTGCATCAATTATCATATACTCATAACCCAACATACAAATAAACAAGCTCGCAGCCTACGAAGGTCACAATTGGTATTGTAACGAACCGACTTCCTAGGACTTGAACTAGGTCATCACTATAGACATGCATACATCACAAACAACCTTTTTTTTTTCATAATTTTACTAAAAATCAGAAGAAATTTTTACTAAAAAGAAATATCTTTTGCAAAATCTAAAAAACTGAAAACCTTTGATCAGGGTGCCCCTTGTACAATTTAATAACACATGAAACTTGCATAAAGTGTCTGACCATGAGAAATTTTAAAGGAAAAAGAAAGTTATGGATTCAAATGACAGGTCCAAAATTCTTAAAGATGAAAACATGAAATCTTGTGCGGACGCAACTGACTAGTCCCAACGGCATGGTCAAGGTATCCTTTCGTCATTCACCGAGATGTCCTTTCCCTTATTTAAAAATAACATGGAAAGAATGAGTAAGAATACCCAGTAAGTAACCCTACTACCGGGGTCAGACTAAACACTCATATCCAATAAGTGCATCATACTAGTGAGACATGCATATTTCTACTTTTCACACTTCACTTATGTGAGTGATTGGTTAGACCCATCCTACCGTTGGCAAATGGTGTCCACGAACCTCTAGTGAATCCCGTAGGAGATACTTACCTCTAGTGATCCCGAAGGAACACAAAACCTCTAGTGGACACACAACCACCGGAGGAGGGTAACTATCACTAACATGCATAACTGGTAAAATACATAAAAAACCCACAACATAGATTCATAATGCCTCTCATACAAACATCATCACATGCAAACAAAATATTTCATAGATGGCACAAAGAAGCCAACAAAGCGATTGTAGTAAGATTACTTACCTTGGAGTTATGTCAAAATAGCTATCAGAATAGCCAAATCCCACCAAATTCTTGAATTAAGACCTAAAACATAAACTCATAATTAAATTAAATCTGTAGACTTAATCCAAAATAATTCACTTTAGCAATTATGTTAATTATTCTTACCCAACGTGCAATTAAGCCTTCAATTGACGGGTCCAATCTAGACGAATCCACAATTAAGGGTTAAGAACCCAATTTTTAACCCTTCCAAAATATTGATACTCACCAAAATTGAAGCAAAATTGACCCTTCGACCCGCTTGGACATCTATTTATTTATTTTTATTTAGTTATTCACTAGCTCGCTTTTGTGTCCCAAAACTTCCCTAAAATTTGAATCTAAAATCCAAACACAACGAGAGTAAGAATACATTGGAGCCAAAATTGAAGGGATTTTCAAGAAATCTCACCAAACTCACCCAAATAAAAATTTCGACGAAAACCACCCGACGGTGGCGCGAACACTCCCACTGCACACGATGGAAACCACTGGTGACAAACTGAATGACGACAAACAGAACCGAGTGGTGGAGACAATTGGCAGAGGAGACAGCGACGATATGTGCTTCTCGGATCTGGCTCAGTGAAGGTGACGAAGAAACTCAACAACTGGCGCTGCTTGGTCGAGCGAAATGAGTTGCAGCTACCGACGGTGGCGAGACGATATGGTGGCGGTCGGTGGTTGAGAACAAGAGGAAGCAAATAG

mRNA sequence

ATGACAGAGGAAGCTGTGTCAGAGATTTTAGACAAGCAGGAACCATCCAGGAAGTCTGTTGGTTCCCATGTTCTTCATGGTGATCACTTATCCGTGGTAGTGCTGATTTCAGTAAGTTTTTGTTTTTTAGGACAATCGCAAGCTAGTGATGGTGTTTTCGATGTGACAAAGTACGGTGCTGTGCCTGATGCTGATATATCTCAGGCTTTAAAAGATGCCTGGAAGGAAGCTTGTGCATCAACCACTCAAAGCAAATTAGTTATTCCAAAAGCAACTTACAAATTAAGTGCAGTTGAGTTGGTGGGCCCTTGCAAAAGCCCTATCGAAATTCAACTTCAAGGAACATTGCAGGCACCACCGGATCTAACGGGAGATGGATGGGTTAGTTTCAGATATATCGATTACTTTACGTTAACAGGTGGTGGCGTTTTGGATGGGCAAGGAAAAGCAGCTTGGGAAAAGAATGATTGTCATAAAAATACAAAGTGCGATCCAATTCCCATGACTTTGAAATTAAGCTTTATCTCAAATGGGATAGTGAGTGATGTAACCTCTAAAGATAGCAAAAATTTTCATGTCAATGTATTGGGTTGTAAGAACCTCACCTTCCAACATTTCACCATAAATGCACCAGAAACTAGTATTAATACCGATGGAATCCATATTGGCCGCTCTGTTGGGATTAACGTCCTTAATACAAACATTGCTACTGGAGATGATTGCATCTCACTTGGGGACGGGAGTAAGCAAGTAACAATTACGAATGTGACATGTGGGCCTGGACATGGTATAAGTGTAGGAAGCCTAGGAAGATACAATGCTGAAGAACCAGTAGAGGGAATCATAGTTAAGAATTGTACATTAATGAATACATCAAATGGCGTTAGAATCAAAACATGGCCAGCTTCTCCTGCTGCTGGAACGGCTTCTGATATGCACTATGAAGATATAATTATGGTCAACGTCAGCAATCCAGTTCTCATAGATCAAGAGTATTGTCCATACAACCAATAACCGAGTGGTGGAGACAATTGGCAGAGGAGACAGCGACGATATGTGCTTCTCGGATCTGGCTCAGTGAAGGTGACGAAGAAACTCAACAACTGGCGCTGCTTGGTCGAGCGAAATGAGTTGCAGCTACCGACGGTGGCGAGACGATATGGTGGCGGTCGGTGGTTGAGAACAAGAGGAAGCAAATAG

Coding sequence (CDS)

ATGACAGAGGAAGCTGTGTCAGAGATTTTAGACAAGCAGGAACCATCCAGGAAGTCTGTTGGTTCCCATGTTCTTCATGGTGATCACTTATCCGTGGTAGTGCTGATTTCAGTAAGTTTTTGTTTTTTAGGACAATCGCAAGCTAGTGATGGTGTTTTCGATGTGACAAAGTACGGTGCTGTGCCTGATGCTGATATATCTCAGGCTTTAAAAGATGCCTGGAAGGAAGCTTGTGCATCAACCACTCAAAGCAAATTAGTTATTCCAAAAGCAACTTACAAATTAAGTGCAGTTGAGTTGGTGGGCCCTTGCAAAAGCCCTATCGAAATTCAACTTCAAGGAACATTGCAGGCACCACCGGATCTAACGGGAGATGGATGGGTTAGTTTCAGATATATCGATTACTTTACGTTAACAGGTGGTGGCGTTTTGGATGGGCAAGGAAAAGCAGCTTGGGAAAAGAATGATTGTCATAAAAATACAAAGTGCGATCCAATTCCCATGACTTTGAAATTAAGCTTTATCTCAAATGGGATAGTGAGTGATGTAACCTCTAAAGATAGCAAAAATTTTCATGTCAATGTATTGGGTTGTAAGAACCTCACCTTCCAACATTTCACCATAAATGCACCAGAAACTAGTATTAATACCGATGGAATCCATATTGGCCGCTCTGTTGGGATTAACGTCCTTAATACAAACATTGCTACTGGAGATGATTGCATCTCACTTGGGGACGGGAGTAAGCAAGTAACAATTACGAATGTGACATGTGGGCCTGGACATGGTATAAGTGTAGGAAGCCTAGGAAGATACAATGCTGAAGAACCAGTAGAGGGAATCATAGTTAAGAATTGTACATTAATGAATACATCAAATGGCGTTAGAATCAAAACATGGCCAGCTTCTCCTGCTGCTGGAACGGCTTCTGATATGCACTATGAAGATATAATTATGGTCAACGTCAGCAATCCAGTTCTCATAGATCAAGAGTATTGTCCATACAACCAATAA

Protein sequence

MTEEAVSEILDKQEPSRKSVGSHVLHGDHLSVVVLISVSFCFLGQSQASDGVFDVTKYGAVPDADISQALKDAWKEACASTTQSKLVIPKATYKLSAVELVGPCKSPIEIQLQGTLQAPPDLTGDGWVSFRYIDYFTLTGGGVLDGQGKAAWEKNDCHKNTKCDPIPMTLKLSFISNGIVSDVTSKDSKNFHVNVLGCKNLTFQHFTINAPETSINTDGIHIGRSVGINVLNTNIATGDDCISLGDGSKQVTITNVTCGPGHGISVGSLGRYNAEEPVEGIIVKNCTLMNTSNGVRIKTWPASPAAGTASDMHYEDIIMVNVSNPVLIDQEYCPYNQ

Homology

[Close]

BLAST of CaUC08G146900 vs. NCBI nr
Match: XP_022157387.1 (exopolygalacturonase-like [Momordica charantia] >XP_022159278.1 exopolygalacturonase-like [Momordica charantia])

HSP 1 Score: 509.2 bits (1310), Expect = 2.7e-140
Identity = 237/308 (76.95%), Postives = 269/308 (87.34%), Query Frame = 0


Query: 30  LSVVVLISVSFCFLGQSQASDGVFDVTKYGAVPDADISQALKDAWKEACASTTQSKLVIP 89
           LSVV+L    F    ++Q+SDG+FDVTK+GA+P+ADIS+AL  AWKEACAS  QSK++IP
Sbjct: 10  LSVVLL----FVSTTKAQSSDGIFDVTKFGAMPNADISKALMSAWKEACASPIQSKVIIP 69

Query: 90  KATYKLSAVELVGPCKSPIEIQLQGTLQAPPDLTGDGWVSFRYIDYFTLTGGGVLDGQGK 149
           K  YKL  ++L GPCKSPIE+QLQGT+QAP DLTG+GWV F+YID+FTL+GGG  DGQGK
Sbjct: 70  KVAYKLGTIDLTGPCKSPIEVQLQGTIQAPIDLTGEGWVQFKYIDHFTLSGGGTFDGQGK 129

Query: 150 AAWEKNDCHKNTKCDPIPMTLKLSFISNGIVSDVTSKDSKNFHVNVLGCKNLTFQHFTIN 209
           AAWEKNDC KN KCD +PM+L+ SFI+N IVSD+TSKDSKNFHV +LGC NLTFQH  +N
Sbjct: 130 AAWEKNDCDKNPKCDRLPMSLRFSFITNSIVSDITSKDSKNFHVQILGCNNLTFQHVNVN 189

Query: 210 APETSINTDGIHIGRSVGINVLNTNIATGDDCISLGDGSKQVTITNVTCGPGHGISVGSL 269
           AP  SINTDGIHIGRS GIN+L+TNI TGDDCISLGDGSKQVTITNVTCGPGHGISVGSL
Sbjct: 190 APGDSINTDGIHIGRSTGINILSTNIGTGDDCISLGDGSKQVTITNVTCGPGHGISVGSL 249

Query: 270 GRYNAEEPVEGIIVKNCTLMNTSNGVRIKTWPASPAAGTASDMHYEDIIMVNVSNPVLID 329
           GRY AEEPVEGI   NCT+MNTSNGVRIKTWPASP AGTASDMH+ED+IMVNVSNP+LID
Sbjct: 250 GRYTAEEPVEGIRATNCTIMNTSNGVRIKTWPASPTAGTASDMHFEDMIMVNVSNPILID 309

Query: 330 QEYCPYNQ 338
           QEYCPYNQ
Sbjct: 310 QEYCPYNQ 313

[Close]

BLAST of CaUC08G146900 vs. NCBI nr
Match: XP_008459709.2 (PREDICTED: exopolygalacturonase-like [Cucumis melo])

HSP 1 Score: 491.1 bits (1263), Expect = 7.6e-135
Identity = 227/286 (79.37%), Postives = 249/286 (87.06%), Query Frame = 0


Query: 52  VFDVTKYGAVPDADISQALKDAWKEACASTTQSKLVIPKATYKLSAVELVGPCKSPIEIQ 111
           +FDVTKYGA P+ADI+QAL DAWKEACAST+  K+VIP  TYKL  +EL G CKSPIEIQ
Sbjct: 23  IFDVTKYGAKPNADITQALADAWKEACASTSPCKIVIPTGTYKLGTIELKGECKSPIEIQ 82

Query: 112 LQGTLQAPPDLTGDGWVSFRYIDYFTLTGGGVLDGQGKAAWEKNDCHKNTKCDPIPMTLK 171
           +QGTLQAPPDLTG+ WV F+YIDY ++T GGV DGQGK AWE NDC KN KC  IPM LK
Sbjct: 83  VQGTLQAPPDLTGEDWVHFKYIDYLSVTSGGVFDGQGKQAWESNDCDKNPKCARIPMNLK 142

Query: 172 LSFISNGIVSDVTSKDSKNFHVNVLGCKNLTFQHFTINAPETSINTDGIHIGRSVGINVL 231
            SFI N IVSD+TSKDSKNFH+ VLGC NLTFQH  +NAPETSINTDGIHIGRS+GIN+L
Sbjct: 143 FSFIKNAIVSDITSKDSKNFHIQVLGCNNLTFQHVNVNAPETSINTDGIHIGRSLGINIL 202

Query: 232 NTNIATGDDCISLGDGSKQVTITNVTCGPGHGISVGSLGRYNAEEPVEGIIVKNCTLMNT 291
           NTNI TGDDCISLGDGSKQVTITNVTCGPGHGISVGSLGRYN EEPVEG+ VKNCTL  T
Sbjct: 203 NTNIGTGDDCISLGDGSKQVTITNVTCGPGHGISVGSLGRYNLEEPVEGLQVKNCTLTGT 262

Query: 292 SNGVRIKTWPASPAAGTASDMHYEDIIMVNVSNPVLIDQEYCPYNQ 338
           +NG+RIKTWPASPAAG ASDMHYED++M NV NP+LIDQEYCPYNQ
Sbjct: 263 TNGLRIKTWPASPAAGVASDMHYEDVVMNNVMNPILIDQEYCPYNQ 308

[Close]

BLAST of CaUC08G146900 vs. NCBI nr
Match: KAA0039364.1 (exopolygalacturonase-like [Cucumis melo var. makuwa] >TYK00547.1 exopolygalacturonase-like [Cucumis melo var. makuwa])

HSP 1 Score: 491.1 bits (1263), Expect = 7.6e-135
Identity = 227/286 (79.37%), Postives = 249/286 (87.06%), Query Frame = 0


Query: 52  VFDVTKYGAVPDADISQALKDAWKEACASTTQSKLVIPKATYKLSAVELVGPCKSPIEIQ 111
           +FDVTKYGA P+ADI+QAL DAWKEACAST+  K+VIP  TYKL  +EL G CKSPIEIQ
Sbjct: 75  IFDVTKYGAKPNADITQALADAWKEACASTSPCKIVIPTGTYKLGTIELKGECKSPIEIQ 134

Query: 112 LQGTLQAPPDLTGDGWVSFRYIDYFTLTGGGVLDGQGKAAWEKNDCHKNTKCDPIPMTLK 171
           +QGTLQAPPDLTG+ WV F+YIDY ++T GGV DGQGK AWE NDC KN KC  IPM LK
Sbjct: 135 VQGTLQAPPDLTGEDWVHFKYIDYLSVTSGGVFDGQGKQAWESNDCDKNPKCARIPMNLK 194

Query: 172 LSFISNGIVSDVTSKDSKNFHVNVLGCKNLTFQHFTINAPETSINTDGIHIGRSVGINVL 231
            SFI N IVSD+TSKDSKNFH+ VLGC NLTFQH  +NAPETSINTDGIHIGRS+GIN+L
Sbjct: 195 FSFIKNAIVSDITSKDSKNFHIQVLGCNNLTFQHVNVNAPETSINTDGIHIGRSLGINIL 254

Query: 232 NTNIATGDDCISLGDGSKQVTITNVTCGPGHGISVGSLGRYNAEEPVEGIIVKNCTLMNT 291
           NTNI TGDDCISLGDGSKQVTITNVTCGPGHGISVGSLGRYN EEPVEG+ VKNCTL  T
Sbjct: 255 NTNIGTGDDCISLGDGSKQVTITNVTCGPGHGISVGSLGRYNLEEPVEGLQVKNCTLTGT 314

Query: 292 SNGVRIKTWPASPAAGTASDMHYEDIIMVNVSNPVLIDQEYCPYNQ 338
           +NG+RIKTWPASPAAG ASDMHYED++M NV NP+LIDQEYCPYNQ
Sbjct: 315 TNGLRIKTWPASPAAGVASDMHYEDVVMNNVMNPILIDQEYCPYNQ 360

[Close]

BLAST of CaUC08G146900 vs. NCBI nr
Match: XP_022150984.1 (exopolygalacturonase-like [Momordica charantia])

HSP 1 Score: 488.0 bits (1255), Expect = 6.4e-134
Identity = 232/307 (75.57%), Postives = 263/307 (85.67%), Query Frame = 0


Query: 35  LISVSFCFL----GQSQASDGVFDVTKYGAVPDADISQALKDAWKEACASTTQSKLVIPK 94
           L+++SF  L    G++Q++DGVFDVTKYGA P  DISQAL  AWKEACASTTQSK++IPK
Sbjct: 11  LVALSFVLLFVSRGKAQSTDGVFDVTKYGAKPGTDISQALLKAWKEACASTTQSKVIIPK 70

Query: 95  ATYKLSAVELVGPCKSPIEIQLQGTLQAPPDLTGDGWVSFRYIDYFTLTGGGVLDGQGKA 154
           A+Y+L+ V+LVGPCKSPI I+ QGTLQAP D TG+GWV+F+YID+F+LTGGGV DGQGK 
Sbjct: 71  ASYQLTGVDLVGPCKSPIGIEFQGTLQAPIDPTGEGWVNFKYIDHFSLTGGGVFDGQGKL 130

Query: 155 AWEKNDCHKNTKCDPIPMTLKLSFISNGIVSDVTSKDSKNFHVNVLGCKNLTFQHFTINA 214
           AWEKNDC +N  C   PM+LK SFI+N IVS++TSKDSKNFHV VLGC NLTF+H TI+A
Sbjct: 131 AWEKNDCGQNPNCAQFPMSLKFSFITNSIVSEITSKDSKNFHVFVLGCNNLTFEHVTIDA 190

Query: 215 PETSINTDGIHIGRSVGINVLNTNIATGDDCISLGDGSKQVTITNVTCGPGHGISVGSLG 274
           P  SINTDGIHIGRS  +NVL+T I TGDDCISLGDGSK VTI NVTCGPGHGISVGSLG
Sbjct: 191 PGHSINTDGIHIGRSNEVNVLSTRIGTGDDCISLGDGSKHVTINNVTCGPGHGISVGSLG 250

Query: 275 RYNAEEPVEGIIVKNCTLMNTSNGVRIKTWPASPAAGTASDMHYEDIIMVNVSNPVLIDQ 334
           RY  EEPVEGIIVKNCT  NT NGVRIKTWPASP  GTA++MHYEDIIMVNVSNP+LIDQ
Sbjct: 251 RYTVEEPVEGIIVKNCTFTNTDNGVRIKTWPASPTPGTATNMHYEDIIMVNVSNPILIDQ 310

Query: 335 EYCPYNQ 338
           EYCPYNQ
Sbjct: 311 EYCPYNQ 317

[Close]

BLAST of CaUC08G146900 vs. NCBI nr
Match: XP_038889253.1 (exopolygalacturonase-like [Benincasa hispida])

HSP 1 Score: 472.6 bits (1215), Expect = 2.8e-129
Identity = 219/309 (70.87%), Postives = 267/309 (86.41%), Query Frame = 0


Query: 30  LSVVVLISVS-FCFLGQSQASDGVFDVTKYGAVPDADISQALKDAWKEACASTTQSKLVI 89
           L++VVL S+S F  LG+ Q++D VFDVTKYGA+P+ DISQAL + W  AC ST+QSK++I
Sbjct: 5   LNLVVLFSISLFVSLGKGQSNDSVFDVTKYGAMPNTDISQALTNVWTMACGSTSQSKVLI 64

Query: 90  PKATYKLSAVELVGPCKSPIEIQLQGTLQAPPDLTGDGWVSFRYIDYFTLTGGGVLDGQG 149
           P+ TY+LS ++L GPCK+ I+IQL+G L+AP +L G+ W+SF+YID FTLTG GV DGQG
Sbjct: 65  PEGTYQLSIIKLTGPCKNHIQIQLEGILEAPINLIGEHWISFQYIDQFTLTGTGVFDGQG 124

Query: 150 KAAWEKNDCHKNTKCDPIPMTLKLSFISNGIVSDVTSKDSKNFHVNVLGCKNLTFQHFTI 209
           K AW KNDC KN+KC  +P+ L+ +FI+N IVSD+TSKDSK+FHVNVLGCKNLTFQH  I
Sbjct: 125 KVAWGKNDCAKNSKCSKLPINLRFNFITNSIVSDITSKDSKSFHVNVLGCKNLTFQHVNI 184

Query: 210 NAPETSINTDGIHIGRSVGINVLNTNIATGDDCISLGDGSKQVTITNVTCGPGHGISVGS 269
           NAP  S NTDGIHI RS+GINV NTNI+TGDDCISLGDGS+QVTITN+TCGPGHGISVGS
Sbjct: 185 NAPGYSPNTDGIHITRSIGINVTNTNISTGDDCISLGDGSRQVTITNITCGPGHGISVGS 244

Query: 270 LGRYNAEEPVEGIIVKNCTLMNTSNGVRIKTWPASPAAGTASDMHYEDIIMVNVSNPVLI 329
           LG+Y AE PV+G+I KNCTL+NT+NGVRIKTWP+SP+ GTASDMH+EDIIMVNVSNP++I
Sbjct: 245 LGKYVAEAPVQGVIAKNCTLINTTNGVRIKTWPSSPSFGTASDMHFEDIIMVNVSNPIII 304

Query: 330 DQEYCPYNQ 338
           DQ+YCP+NQ
Sbjct: 305 DQKYCPWNQ 313

[Close]

BLAST of CaUC08G146900 vs. ExPASy Swiss-Prot
Match: P24548 (Exopolygalacturonase (Fragment) OS=Oenothera organensis OX=3945 PE=2 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 1.4e-99
Identity = 173/277 (62.45%), Postives = 210/277 (75.81%), Query Frame = 0


Query: 65  DISQALKDAWKEACASTTQSKLVIPKATYKLSAVELVGPCKSPIEIQLQGTLQAPPD--- 124
           D +QAL  AWKEACAS + S +++PK  + +  + L GPCKS I +QLQGTL+AP D   
Sbjct: 1   DSTQALTTAWKEACASASPSTILVPKGNFAVGLITLEGPCKSSIGLQLQGTLKAPADPSK 60

Query: 125 LTGDGWVSFRYIDYFTLTGGGVLDGQGKAAWEKNDCHKNTK-CDPIPMTLKLSFISNGIV 184
           + G GW++   ID  T+ GGGV DGQGK+AW +NDCHKN   C  + M L+L  ++N I+
Sbjct: 61  IKGLGWINLNKIDLLTIFGGGVFDGQGKSAWVQNDCHKNGPICKTLSMNLRLYAVTNSIL 120

Query: 185 SDVTSKDSKNFHVNVLGCKNLTFQHFTINAPETSINTDGIHIGRSVGINVLNTNIATGDD 244
            DVT+ DSKNFHVNV+GCKNLTF+ F I+A ETSINTDGIHIGRS G+N++NT I TGDD
Sbjct: 121 RDVTTLDSKNFHVNVIGCKNLTFERFKISAAETSINTDGIHIGRSDGVNIINTEIKTGDD 180

Query: 245 CISLGDGSKQVTITNVTCGPGHGISVGSLGRYNAEEPVEGIIVKNCTLMNTSNGVRIKTW 304
           CISLGDGSK + ITN+TCGPGHGISVGSLGRY  EE V GI VKNCT+  + NGVRIKTW
Sbjct: 181 CISLGDGSKNINITNITCGPGHGISVGSLGRYKNEESVVGIYVKNCTITGSQNGVRIKTW 240

Query: 305 PASPAAGTASDMHYEDIIMVNVSNPVLIDQEYCPYNQ 338
           P S   G AS+MH++DI M +V  P+LIDQ YCPYNQ
Sbjct: 241 PKS-EPGEASEMHFQDITMNSVGTPILIDQGYCPYNQ 276

[Close]

BLAST of CaUC08G146900 vs. ExPASy Swiss-Prot
Match: Q40312 (Polygalacturonase OS=Medicago sativa OX=3879 PE=2 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 1.8e-99
Identity = 177/314 (56.37%), Postives = 223/314 (71.02%), Query Frame = 0


Query: 36  ISVSFCFLGQ-SQASDGVFDVTKYGAVPDADISQALKDAWKEACASTTQSKLVIPKATYK 95
           I VSF F+     A  GV D++K+G  P++DI QAL  AW EACASTT +K+VIP  TY+
Sbjct: 7   IIVSFLFIADFCAAQSGVLDISKFGGKPNSDIGQALTSAWNEACASTTAAKIVIPAGTYQ 66

Query: 96  LSAVELVGPCKSPIEIQLQGTLQAPPDLT----GDGWVSFRYIDYFTLTGGGVLDGQGKA 155
           L+ +EL GPCK+PIE+Q+ GT+QAP D +     + W  F Y+D+ TL+G GV DGQG  
Sbjct: 67  LNGIELKGPCKAPIELQVDGTIQAPADPSVIKGTEQWFKFLYMDHLTLSGKGVFDGQGAT 126

Query: 156 AWEK-------NDCHKNTKCDPIPMTLKLSFISNGIVSDVTSKDSKNFHVNVLGCKNLTF 215
            ++K       +  + N+K   + M    +F++N IV  VTSKDSKNFHV V GCKN+TF
Sbjct: 127 VYKKAAPASAWSGKNSNSK---VFMNFGFNFVNNSIVRGVTSKDSKNFHVMVFGCKNITF 186

Query: 216 QHFTINAPETSINTDGIHIGRSVGINVLNTNIATGDDCISLGDGSKQVTITNVTCGPGHG 275
             FTI AP  S NTDGIH+G+S  + +LNTNI TGDDC+S+GDGSKQ+T+  V CGPGHG
Sbjct: 187 DGFTITAPGDSPNTDGIHMGKSTDVKILNTNIGTGDDCVSIGDGSKQITVQGVNCGPGHG 246

Query: 276 ISVGSLGRYNAEEPVEGIIVKNCTLMNTSNGVRIKTWPASPAAGTASDMHYEDIIMVNVS 335
           +SVGSLG++  EE VEGI VKNCTL  T NGVRIKTWP +P   T SD+H+EDI M NV 
Sbjct: 247 LSVGSLGKFTTEENVEGITVKNCTLTATDNGVRIKTWPDAPGTITVSDIHFEDITMTNVK 306

Query: 336 NPVLIDQEYCPYNQ 338
           NPV+IDQEY P+NQ
Sbjct: 307 NPVIIDQEYYPWNQ 317

[Close]

BLAST of CaUC08G146900 vs. ExPASy Swiss-Prot
Match: Q05967 (Polygalacturonase OS=Nicotiana tabacum OX=4097 GN=PG1 PE=2 SV=1)

HSP 1 Score: 351.7 bits (901), Expect = 9.4e-96
Identity = 171/312 (54.81%), Postives = 229/312 (73.40%), Query Frame = 0


Query: 29  HLSVVVLISVSFCFLGQSQASDGVFDVTKYGAVPDADISQALKDAWKEACASTTQSKLVI 88
           H ++V+L    F   G+SQ   GVFD+TKYGA  +ADIS+AL +A+KEAC ST+ S +VI
Sbjct: 8   HFALVLLFLAHF---GESQT--GVFDITKYGANSNADISEALLNAFKEACQSTSPSTIVI 67

Query: 89  PKATYKLSAVELVGPCKSPIEIQLQGTLQAPPD---LTGDGWVSFRYIDYFTLTGGGVLD 148
           PK T+ ++ V+L GPCKSP+E+Q+Q TL+AP D   L    W++   +D FT++GGG+LD
Sbjct: 68  PKGTFTMNQVKLEGPCKSPLELQIQATLKAPSDPSQLKVGEWLTVNKLDQFTMSGGGILD 127

Query: 149 GQGKAAWEKNDCHKNTKCDPIPMTLKLSFISNGIVSDVTSKDSKNFHVNVLGCKNLTFQH 208
           GQ  AAWE   C ++ KC+ +P  L  + ++N  + D+T+ DSK+FHVNV  CKNLTF  
Sbjct: 128 GQAAAAWE---CKQSKKCNKLPNNLSFNSLTNSTIKDITTLDSKSFHVNVNQCKNLTFIR 187

Query: 209 FTINAPETSINTDGIHIGRSVGINVLNTNIATGDDCISLGDGSKQVTITNVTCGPGHGIS 268
           F ++AP  S NTDGIH+ RS  +N+ ++N +TGDDCIS+GD ++Q+ IT VTCGPGHGIS
Sbjct: 188 FNVSAPANSPNTDGIHVSRSSSVNITDSNFSTGDDCISVGDETEQLYITRVTCGPGHGIS 247

Query: 269 VGSLGRYNAEEPVEGIIVKNCTLMNTSNGVRIKTWPASPAAGTASDMHYEDIIMVNVSNP 328
           VGSLG    E+PV G+ V+NCT  NT NGVRIKTWPAS   G  +D+H+EDII+ NVSNP
Sbjct: 248 VGSLGGNPDEKPVVGVFVRNCTFTNTDNGVRIKTWPAS-HPGVVNDVHFEDIIVQNVSNP 307

Query: 329 VLIDQEYCPYNQ 338
           V+IDQ YCP+N+
Sbjct: 308 VVIDQVYCPFNK 310

[Close]

BLAST of CaUC08G146900 vs. ExPASy Swiss-Prot
Match: Q39766 (Polygalacturonase OS=Gossypium barbadense OX=3634 GN=G9 PE=2 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 8.0e-95
Identity = 164/316 (51.90%), Postives = 219/316 (69.30%), Query Frame = 0


Query: 29  HLSVV-VLISVSFCFLGQSQASDGVFD-VTKYGAVPD--ADISQALKDAWKEACASTTQS 88
           HL++V  +  +   F+  S+     FD V K+GA  D   D+S+   DAWKEACAS T S
Sbjct: 4   HLNIVPSMFVLLLLFISASKVQPDAFDVVAKFGAKADGKTDLSKPFLDAWKEACASVTPS 63

Query: 89  KLVIPKATYKLSAVELVGPCKSPIEIQLQGTLQAPPD---LTGDGWVSFRYIDYFTLTGG 148
            +VIPK TY LS V L GPCK+PIEI +QGT+QAP D        WV F  ++ F + GG
Sbjct: 64  TVVIPKGTYLLSKVNLEGPCKAPIEINVQGTIQAPADPSAFKDPNWVRFYSVENFKMFGG 123

Query: 149 GVLDGQGKAAWEKNDCHKNTKCDPIPMTLKLSFISNGIVSDVTSKDSKNFHVNVLGCKNL 208
           G+ DGQG  A+EKN C        +P+ ++  F++N ++ D+TSKDSK FH+NV  CKN+
Sbjct: 124 GIFDGQGSIAYEKNTCENREFRSKLPVNIRFDFVTNALIQDITSKDSKLFHINVFACKNI 183

Query: 209 TFQHFTINAPETSINTDGIHIGRSVGINVLNTNIATGDDCISLGDGSKQVTITNVTCGPG 268
           T +   I AP+ S NTDGIH+G+S G+N++ ++I TGDDCIS+GDG+K + I  +TCGPG
Sbjct: 184 TLERLKIEAPDESPNTDGIHMGKSEGVNIIASDIKTGDDCISIGDGTKNMVIKEITCGPG 243

Query: 269 HGISVGSLGRYNAEEPVEGIIVKNCTLMNTSNGVRIKTWPASPAAGTASDMHYEDIIMVN 328
           HGIS+GSLG++  EEPVEGI + NCT+ NTSNG RIKTWP     G  S++H+EDI M N
Sbjct: 244 HGISIGSLGKFQNEEPVEGIKISNCTITNTSNGARIKTWPGE-HGGAVSEIHFEDITMNN 303

Query: 329 VSNPVLIDQEYCPYNQ 338
           VS+P+LIDQ+YCP+N+
Sbjct: 304 VSSPILIDQQYCPWNK 318

[Close]

BLAST of CaUC08G146900 vs. ExPASy Swiss-Prot
Match: Q39786 (Polygalacturonase OS=Gossypium hirsutum OX=3635 GN=G9 PE=2 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 8.0e-95
Identity = 164/316 (51.90%), Postives = 219/316 (69.30%), Query Frame = 0


Query: 29  HLSVV-VLISVSFCFLGQSQASDGVFD-VTKYGAVPD--ADISQALKDAWKEACASTTQS 88
           HL++V  +  +   F+  S+     FD V K+GA  D   D+S+   DAWKEACAS T S
Sbjct: 4   HLNIVPSMFVLLLLFISASKVQSDAFDVVAKFGAKADGKTDLSKPFLDAWKEACASVTPS 63

Query: 89  KLVIPKATYKLSAVELVGPCKSPIEIQLQGTLQAPPD---LTGDGWVSFRYIDYFTLTGG 148
            +VIPK TY LS V L GPCK+PIEI +QGT+QAP D        WV F  ++ F + GG
Sbjct: 64  TVVIPKGTYLLSKVNLEGPCKAPIEINVQGTIQAPADPSAFKDPNWVRFYSVENFKMFGG 123

Query: 149 GVLDGQGKAAWEKNDCHKNTKCDPIPMTLKLSFISNGIVSDVTSKDSKNFHVNVLGCKNL 208
           G+ DGQG  A+EKN C        +P+ ++  F++N ++ D+TSKDSK FH+NV  CKN+
Sbjct: 124 GIFDGQGSIAYEKNTCENREFRSKLPVNIRFDFLTNALIQDITSKDSKLFHINVFACKNI 183

Query: 209 TFQHFTINAPETSINTDGIHIGRSVGINVLNTNIATGDDCISLGDGSKQVTITNVTCGPG 268
           T +   I AP+ S NTDGIH+G+S G+N++ ++I TGDDCIS+GDG+K + I  +TCGPG
Sbjct: 184 TLERLKIEAPDESPNTDGIHMGKSEGVNIIASDIKTGDDCISIGDGTKNMVIKEITCGPG 243

Query: 269 HGISVGSLGRYNAEEPVEGIIVKNCTLMNTSNGVRIKTWPASPAAGTASDMHYEDIIMVN 328
           HGIS+GSLG++  EEPVEGI + NCT+ NTSNG RIKTWP     G  S++H+EDI M N
Sbjct: 244 HGISIGSLGKFQNEEPVEGIKISNCTITNTSNGARIKTWPGE-HGGAVSEIHFEDITMNN 303

Query: 329 VSNPVLIDQEYCPYNQ 338
           VS+P+LIDQ+YCP+N+
Sbjct: 304 VSSPILIDQQYCPWNK 318

[Close]

BLAST of CaUC08G146900 vs. ExPASy TrEMBL
Match: A0A6J1DUC6 (exopolygalacturonase-like OS=Momordica charantia OX=3673 GN=LOC111024096 PE=3 SV=1)

HSP 1 Score: 509.2 bits (1310), Expect = 1.3e-140
Identity = 237/308 (76.95%), Postives = 269/308 (87.34%), Query Frame = 0


Query: 30  LSVVVLISVSFCFLGQSQASDGVFDVTKYGAVPDADISQALKDAWKEACASTTQSKLVIP 89
           LSVV+L    F    ++Q+SDG+FDVTK+GA+P+ADIS+AL  AWKEACAS  QSK++IP
Sbjct: 10  LSVVLL----FVSTTKAQSSDGIFDVTKFGAMPNADISKALMSAWKEACASPIQSKVIIP 69

Query: 90  KATYKLSAVELVGPCKSPIEIQLQGTLQAPPDLTGDGWVSFRYIDYFTLTGGGVLDGQGK 149
           K  YKL  ++L GPCKSPIE+QLQGT+QAP DLTG+GWV F+YID+FTL+GGG  DGQGK
Sbjct: 70  KVAYKLGTIDLTGPCKSPIEVQLQGTIQAPIDLTGEGWVQFKYIDHFTLSGGGTFDGQGK 129

Query: 150 AAWEKNDCHKNTKCDPIPMTLKLSFISNGIVSDVTSKDSKNFHVNVLGCKNLTFQHFTIN 209
           AAWEKNDC KN KCD +PM+L+ SFI+N IVSD+TSKDSKNFHV +LGC NLTFQH  +N
Sbjct: 130 AAWEKNDCDKNPKCDRLPMSLRFSFITNSIVSDITSKDSKNFHVQILGCNNLTFQHVNVN 189

Query: 210 APETSINTDGIHIGRSVGINVLNTNIATGDDCISLGDGSKQVTITNVTCGPGHGISVGSL 269
           AP  SINTDGIHIGRS GIN+L+TNI TGDDCISLGDGSKQVTITNVTCGPGHGISVGSL
Sbjct: 190 APGDSINTDGIHIGRSTGINILSTNIGTGDDCISLGDGSKQVTITNVTCGPGHGISVGSL 249

Query: 270 GRYNAEEPVEGIIVKNCTLMNTSNGVRIKTWPASPAAGTASDMHYEDIIMVNVSNPVLID 329
           GRY AEEPVEGI   NCT+MNTSNGVRIKTWPASP AGTASDMH+ED+IMVNVSNP+LID
Sbjct: 250 GRYTAEEPVEGIRATNCTIMNTSNGVRIKTWPASPTAGTASDMHFEDMIMVNVSNPILID 309

Query: 330 QEYCPYNQ 338
           QEYCPYNQ
Sbjct: 310 QEYCPYNQ 313

[Close]

BLAST of CaUC08G146900 vs. ExPASy TrEMBL
Match: A0A5A7T7B3 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G001590 PE=3 SV=1)

HSP 1 Score: 491.1 bits (1263), Expect = 3.7e-135
Identity = 227/286 (79.37%), Postives = 249/286 (87.06%), Query Frame = 0


Query: 52  VFDVTKYGAVPDADISQALKDAWKEACASTTQSKLVIPKATYKLSAVELVGPCKSPIEIQ 111
           +FDVTKYGA P+ADI+QAL DAWKEACAST+  K+VIP  TYKL  +EL G CKSPIEIQ
Sbjct: 75  IFDVTKYGAKPNADITQALADAWKEACASTSPCKIVIPTGTYKLGTIELKGECKSPIEIQ 134

Query: 112 LQGTLQAPPDLTGDGWVSFRYIDYFTLTGGGVLDGQGKAAWEKNDCHKNTKCDPIPMTLK 171
           +QGTLQAPPDLTG+ WV F+YIDY ++T GGV DGQGK AWE NDC KN KC  IPM LK
Sbjct: 135 VQGTLQAPPDLTGEDWVHFKYIDYLSVTSGGVFDGQGKQAWESNDCDKNPKCARIPMNLK 194

Query: 172 LSFISNGIVSDVTSKDSKNFHVNVLGCKNLTFQHFTINAPETSINTDGIHIGRSVGINVL 231
            SFI N IVSD+TSKDSKNFH+ VLGC NLTFQH  +NAPETSINTDGIHIGRS+GIN+L
Sbjct: 195 FSFIKNAIVSDITSKDSKNFHIQVLGCNNLTFQHVNVNAPETSINTDGIHIGRSLGINIL 254

Query: 232 NTNIATGDDCISLGDGSKQVTITNVTCGPGHGISVGSLGRYNAEEPVEGIIVKNCTLMNT 291
           NTNI TGDDCISLGDGSKQVTITNVTCGPGHGISVGSLGRYN EEPVEG+ VKNCTL  T
Sbjct: 255 NTNIGTGDDCISLGDGSKQVTITNVTCGPGHGISVGSLGRYNLEEPVEGLQVKNCTLTGT 314

Query: 292 SNGVRIKTWPASPAAGTASDMHYEDIIMVNVSNPVLIDQEYCPYNQ 338
           +NG+RIKTWPASPAAG ASDMHYED++M NV NP+LIDQEYCPYNQ
Sbjct: 315 TNGLRIKTWPASPAAGVASDMHYEDVVMNNVMNPILIDQEYCPYNQ 360

[Close]

BLAST of CaUC08G146900 vs. ExPASy TrEMBL
Match: A0A1S3CC08 (exopolygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103498752 PE=3 SV=1)

HSP 1 Score: 491.1 bits (1263), Expect = 3.7e-135
Identity = 227/286 (79.37%), Postives = 249/286 (87.06%), Query Frame = 0


Query: 52  VFDVTKYGAVPDADISQALKDAWKEACASTTQSKLVIPKATYKLSAVELVGPCKSPIEIQ 111
           +FDVTKYGA P+ADI+QAL DAWKEACAST+  K+VIP  TYKL  +EL G CKSPIEIQ
Sbjct: 23  IFDVTKYGAKPNADITQALADAWKEACASTSPCKIVIPTGTYKLGTIELKGECKSPIEIQ 82

Query: 112 LQGTLQAPPDLTGDGWVSFRYIDYFTLTGGGVLDGQGKAAWEKNDCHKNTKCDPIPMTLK 171
           +QGTLQAPPDLTG+ WV F+YIDY ++T GGV DGQGK AWE NDC KN KC  IPM LK
Sbjct: 83  VQGTLQAPPDLTGEDWVHFKYIDYLSVTSGGVFDGQGKQAWESNDCDKNPKCARIPMNLK 142

Query: 172 LSFISNGIVSDVTSKDSKNFHVNVLGCKNLTFQHFTINAPETSINTDGIHIGRSVGINVL 231
            SFI N IVSD+TSKDSKNFH+ VLGC NLTFQH  +NAPETSINTDGIHIGRS+GIN+L
Sbjct: 143 FSFIKNAIVSDITSKDSKNFHIQVLGCNNLTFQHVNVNAPETSINTDGIHIGRSLGINIL 202

Query: 232 NTNIATGDDCISLGDGSKQVTITNVTCGPGHGISVGSLGRYNAEEPVEGIIVKNCTLMNT 291
           NTNI TGDDCISLGDGSKQVTITNVTCGPGHGISVGSLGRYN EEPVEG+ VKNCTL  T
Sbjct: 203 NTNIGTGDDCISLGDGSKQVTITNVTCGPGHGISVGSLGRYNLEEPVEGLQVKNCTLTGT 262

Query: 292 SNGVRIKTWPASPAAGTASDMHYEDIIMVNVSNPVLIDQEYCPYNQ 338
           +NG+RIKTWPASPAAG ASDMHYED++M NV NP+LIDQEYCPYNQ
Sbjct: 263 TNGLRIKTWPASPAAGVASDMHYEDVVMNNVMNPILIDQEYCPYNQ 308

[Close]

BLAST of CaUC08G146900 vs. ExPASy TrEMBL
Match: A0A6J1DBN7 (exopolygalacturonase-like OS=Momordica charantia OX=3673 GN=LOC111019009 PE=3 SV=1)

HSP 1 Score: 488.0 bits (1255), Expect = 3.1e-134
Identity = 232/307 (75.57%), Postives = 263/307 (85.67%), Query Frame = 0


Query: 35  LISVSFCFL----GQSQASDGVFDVTKYGAVPDADISQALKDAWKEACASTTQSKLVIPK 94
           L+++SF  L    G++Q++DGVFDVTKYGA P  DISQAL  AWKEACASTTQSK++IPK
Sbjct: 11  LVALSFVLLFVSRGKAQSTDGVFDVTKYGAKPGTDISQALLKAWKEACASTTQSKVIIPK 70

Query: 95  ATYKLSAVELVGPCKSPIEIQLQGTLQAPPDLTGDGWVSFRYIDYFTLTGGGVLDGQGKA 154
           A+Y+L+ V+LVGPCKSPI I+ QGTLQAP D TG+GWV+F+YID+F+LTGGGV DGQGK 
Sbjct: 71  ASYQLTGVDLVGPCKSPIGIEFQGTLQAPIDPTGEGWVNFKYIDHFSLTGGGVFDGQGKL 130

Query: 155 AWEKNDCHKNTKCDPIPMTLKLSFISNGIVSDVTSKDSKNFHVNVLGCKNLTFQHFTINA 214
           AWEKNDC +N  C   PM+LK SFI+N IVS++TSKDSKNFHV VLGC NLTF+H TI+A
Sbjct: 131 AWEKNDCGQNPNCAQFPMSLKFSFITNSIVSEITSKDSKNFHVFVLGCNNLTFEHVTIDA 190

Query: 215 PETSINTDGIHIGRSVGINVLNTNIATGDDCISLGDGSKQVTITNVTCGPGHGISVGSLG 274
           P  SINTDGIHIGRS  +NVL+T I TGDDCISLGDGSK VTI NVTCGPGHGISVGSLG
Sbjct: 191 PGHSINTDGIHIGRSNEVNVLSTRIGTGDDCISLGDGSKHVTINNVTCGPGHGISVGSLG 250

Query: 275 RYNAEEPVEGIIVKNCTLMNTSNGVRIKTWPASPAAGTASDMHYEDIIMVNVSNPVLIDQ 334
           RY  EEPVEGIIVKNCT  NT NGVRIKTWPASP  GTA++MHYEDIIMVNVSNP+LIDQ
Sbjct: 251 RYTVEEPVEGIIVKNCTFTNTDNGVRIKTWPASPTPGTATNMHYEDIIMVNVSNPILIDQ 310

Query: 335 EYCPYNQ 338
           EYCPYNQ
Sbjct: 311 EYCPYNQ 317

[Close]

BLAST of CaUC08G146900 vs. ExPASy TrEMBL
Match: A0A6J1HJP4 (exopolygalacturonase-like OS=Cucurbita maxima OX=3661 GN=LOC111465122 PE=3 SV=1)

HSP 1 Score: 467.6 bits (1202), Expect = 4.3e-128
Identity = 212/308 (68.83%), Postives = 259/308 (84.09%), Query Frame = 0


Query: 30  LSVVVLISVSFCFLGQSQASDGVFDVTKYGAVPDADISQALKDAWKEACASTTQSKLVIP 89
           LS V+L+ VS   +  +Q+SDGVFDVT YGA P+ADI+Q L  AWK+ACAS  QSKL+IP
Sbjct: 10  LSFVLLLYVS---IRTAQSSDGVFDVTTYGAKPNADITQILDKAWKDACASPIQSKLIIP 69

Query: 90  KATYKLSAVELVGPCKSPIEIQLQGTLQAPPDLTGDGWVSFRYIDYFTLTGGGVLDGQGK 149
           K TY L  + L+GPCKSPI+I +QGT+ AP D+TGDGW+ FRY+D  +LTGGGV DGQG+
Sbjct: 70  KETYMLGVITLLGPCKSPIDIVVQGTIMAPVDITGDGWIQFRYVDKISLTGGGVFDGQGQ 129

Query: 150 AAWEKNDCHKNTKCDPIPMTLKLSFISNGIVSDVTSKDSKNFHVNVLGCKNLTFQHFTIN 209
            AWE+NDCHKN KC  IPM+LK SF+ + IV D+TSKDSKNFHVN+LGCKNLTF H TIN
Sbjct: 130 KAWERNDCHKNPKCARIPMSLKFSFVKDSIVRDITSKDSKNFHVNILGCKNLTFDHVTIN 189

Query: 210 APETSINTDGIHIGRSVGINVLNTNIATGDDCISLGDGSKQVTITNVTCGPGHGISVGSL 269
           AP TSIN+DGIH+GR  G+N++N+ I TGDDCISLGDGS++VTITNVTCGPGHGISVGSL
Sbjct: 190 APGTSINSDGIHMGRCDGVNIINSVIGTGDDCISLGDGSREVTITNVTCGPGHGISVGSL 249

Query: 270 GRYNAEEPVEGIIVKNCTLMNTSNGVRIKTWPASPAAGTASDMHYEDIIMVNVSNPVLID 329
           G+Y  EEPV G+ VKNCTL+ T+NG+RIKTWPASPA G+ +DMHYEDI++V+V NP+++D
Sbjct: 250 GQYLVEEPVAGLYVKNCTLIGTTNGLRIKTWPASPATGSVTDMHYEDIVLVDVQNPIILD 309

Query: 330 QEYCPYNQ 338
           QEYCPYN+
Sbjct: 310 QEYCPYNK 314

[Close]

BLAST of CaUC08G146900 vs. TAIR 10
Match: AT3G07820.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 339.7 bits (870), Expect = 2.6e-93
Identity = 164/299 (54.85%), Postives = 216/299 (72.24%), Query Frame = 0


Query: 41  CFLGQSQASDGVFDVTKYGAVPDADISQALKDAWKEACASTTQSKLVIPKATYKLSAVEL 100
           C LG S A+  VF +   G+   +DI+QAL  A+  AC S++ SK+VIPK  +KL  +E+
Sbjct: 14  CLLGIS-ANAEVFTI---GSSSGSDITQALLKAFTSACQSSSPSKVVIPKGEFKLGEIEM 73

Query: 101 VGPCKSPIEIQLQGTLQAPPDLT--GDGWVSFRYIDYFTLTGGGVLDGQGKAAWEKNDCH 160
            GPCK+PIE+ LQGT++A  +     + WV F  ID F L GGG  DG+G AAW  N+CH
Sbjct: 74  RGPCKAPIEVTLQGTVKADGNAIQGKEKWVVFGNIDGFKLNGGGAFDGEGNAAWRVNNCH 133

Query: 161 KNTKCDPIPMTLKLSFISNGIVSDVTSKDSKNFHVNVLGCKNLTFQHFTINAPETSINTD 220
           K  +C  +P++++  FI N  + D++S D+KNFH+NVLG KN+T  +  I APE S NTD
Sbjct: 134 KTFECKKLPISIRFDFILNSEIRDISSIDAKNFHINVLGAKNMTMNNIKIVAPEDSPNTD 193

Query: 221 GIHIGRSVGINVLNTNIATGDDCISLGDGSKQVTITNVTCGPGHGISVGSLGRYNAEEPV 280
           GIH+GRS G+ +LN+ I+TGDDCIS+GDG K + +  VTCGPGHGISVGSLGRY  E+ V
Sbjct: 194 GIHLGRSDGVKILNSFISTGDDCISVGDGMKNLHVEKVTCGPGHGISVGSLGRYGHEQDV 253

Query: 281 EGIIVKNCTLMNTSNGVRIKTWPASPAAGTASDMHYEDIIMVNVSNPVLIDQEYCPYNQ 338
            GI V NCTL  T NG+RIKTWP++  + TASD+H+EDII+ +VSNP+LIDQEYCP+NQ
Sbjct: 254 SGIKVINCTLQETDNGLRIKTWPSAACSTTASDIHFEDIILKDVSNPILIDQEYCPWNQ 308

[Close]

BLAST of CaUC08G146900 vs. TAIR 10
Match: AT3G07840.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 339.3 bits (869), Expect = 3.4e-93
Identity = 166/313 (53.04%), Postives = 220/313 (70.29%), Query Frame = 0


Query: 27  GDHLSVVVLISVSFCFLGQSQASDGVFDVTKYGAVPDADISQALKDAWKEACASTTQSKL 86
           G +L +  ++ V    LG S A+  VF+V   G  P +DI+QAL  A+  AC + T SK+
Sbjct: 2   GSYLGISAVLFV-ISLLGFS-ANAEVFNV---GGSPGSDITQALLKAFTSACQAPTASKV 61

Query: 87  VIPKATYKLSAVELVGPCKSPIEIQLQGTLQAPPDLT--GDGWVSFRYIDYFTLTGGGVL 146
           VI K  +KL  +E+ GPCK+P+EI LQGTL+A        + WV F  I+ F L GGG+ 
Sbjct: 62  VITKGEFKLGEIEMTGPCKAPVEINLQGTLKADGKAIQGKERWVVFLRINGFKLNGGGIF 121

Query: 147 DGQGKAAWEKNDCHKNTKCDPIPMTLKLSFISNGIVSDVTSKDSKNFHVNVLGCKNLTFQ 206
           DG+G AAW  N+CHK  +C  +P++++  F+ N  + D++S D+KNFH+NVLG KN+TF 
Sbjct: 122 DGEGNAAWRVNNCHKTFECKKLPISIRFDFVENAEIRDISSIDAKNFHINVLGAKNMTFD 181

Query: 207 HFTINAPETSINTDGIHIGRSVGINVLNTNIATGDDCISLGDGSKQVTITNVTCGPGHGI 266
           +  + AP  S NTDGIH+GRS G+ +LN+ IATGDDCIS+GDG K + + NV CGPGHGI
Sbjct: 182 NVKVIAPAESPNTDGIHLGRSEGVKILNSKIATGDDCISVGDGMKNLHVENVMCGPGHGI 241

Query: 267 SVGSLGRYNAEEPVEGIIVKNCTLMNTSNGVRIKTWPASPAAGTASDMHYEDIIMVNVSN 326
           SVGSLGRY  E+ V GI V NCTL  T NG+RIKTWP++  A TAS +H+E+II+ NVSN
Sbjct: 242 SVGSLGRYVHEQDVTGITVVNCTLQGTDNGLRIKTWPSAACATTASGIHFENIILNNVSN 301

Query: 327 PVLIDQEYCPYNQ 338
           P+LIDQEYCP+NQ
Sbjct: 302 PILIDQEYCPWNQ 309

[Close]

BLAST of CaUC08G146900 vs. TAIR 10
Match: AT5G48140.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 336.7 bits (862), Expect = 2.2e-92
Identity = 156/299 (52.17%), Postives = 217/299 (72.58%), Query Frame = 0


Query: 40  FCFLGQSQASDGVFDVTKYGAVPDADISQALKDAWKEACASTTQSKLVIPKATYKLSAVE 99
           FC LG S A+  +F++    + P +DI+ AL  A+ EAC   T+S ++IPK  YKL  + 
Sbjct: 14  FCLLGLS-ANAKIFNI---NSPPGSDITNALLKAFNEACQFPTKSTVMIPKGEYKLGEIV 73

Query: 100 LVGPCKSPIEIQLQGTLQAPPDLTG-DGWVSFRYIDYFTLTGGGVLDGQGKAAWEKNDCH 159
           ++GPCK+PI I L GT++A  +  G + WV+FR I+ F L GGGV DG+G AAW  N+CH
Sbjct: 74  MMGPCKAPIRIALLGTVKADGNANGKEKWVAFRNINGFKLNGGGVFDGEGNAAWRVNNCH 133

Query: 160 KNTKCDPIPMTLKLSFISNGIVSDVTSKDSKNFHVNVLGCKNLTFQHFTINAPETSINTD 219
           K   C  +P++++  F+++  +  +TS D+K+FH+NV+G KN+TF+   I AP  S NTD
Sbjct: 134 KTFNCKKLPISIRFDFVTDAKIRGITSLDAKHFHINVIGAKNVTFEDVKIIAPAESPNTD 193

Query: 220 GIHIGRSVGINVLNTNIATGDDCISLGDGSKQVTITNVTCGPGHGISVGSLGRYNAEEPV 279
           GIH+GRS GI ++N+ I+TGDDC+S+GDG K + +  VTCGPGHGIS+GSLGRY+ EE V
Sbjct: 194 GIHVGRSDGIKIINSFISTGDDCVSVGDGMKNLLVERVTCGPGHGISIGSLGRYSHEENV 253

Query: 280 EGIIVKNCTLMNTSNGVRIKTWPASPAAGTASDMHYEDIIMVNVSNPVLIDQEYCPYNQ 338
            GI + NCTL  T NG+RIKTWP++    TASD+H+E+I++ NVSNP+LIDQEYCP+NQ
Sbjct: 254 SGIKIINCTLQETDNGLRIKTWPSAACTTTASDIHFENILLKNVSNPILIDQEYCPWNQ 308

[Close]

BLAST of CaUC08G146900 vs. TAIR 10
Match: AT3G07830.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 333.2 bits (853), Expect = 2.5e-91
Identity = 156/299 (52.17%), Postives = 213/299 (71.24%), Query Frame = 0


Query: 41  CFLGQSQASDGVFDVTKYGAVPDADISQALKDAWKEACASTTQSKLVIPKATYKLSAVEL 100
           C LG S  +  V  +T   + P +DI+QAL  A+  AC S T  K+VIPK  +KL  + +
Sbjct: 14  CLLGFSANAHEVLRLT---SSPGSDITQALLRAFTTACQSPTPRKVVIPKGQFKLGEIMM 73

Query: 101 VGPCKSPIEIQLQGTLQAPPDLT--GDGWVSFRYIDYFTLTGGGVLDGQGKAAWEKNDCH 160
            GPCKSP+EI L GT+ A  +     + WV F+ +D F L GGG  DG+G AAW  N+CH
Sbjct: 74  SGPCKSPVEITLLGTVLADGNSIHGKEKWVVFQRMDGFRLNGGGTFDGEGNAAWRVNNCH 133

Query: 161 KNTKCDPIPMTLKLSFISNGIVSDVTSKDSKNFHVNVLGCKNLTFQHFTINAPETSINTD 220
           K  +C  +P++++  F++N  + D++S D+KNFH+NV+G KN+TF +  I AP  S NTD
Sbjct: 134 KTFECKKLPISIRFDFVTNAEIRDISSIDAKNFHINVIGAKNMTFDNVKIMAPAESPNTD 193

Query: 221 GIHIGRSVGINVLNTNIATGDDCISLGDGSKQVTITNVTCGPGHGISVGSLGRYNAEEPV 280
           GIH+GRSVG++++N+ I+TGDDC+S+GDG   + + NV CGPGHGISVGSLGRY  E+ V
Sbjct: 194 GIHLGRSVGVSIINSRISTGDDCVSVGDGMVNLLVKNVVCGPGHGISVGSLGRYGHEQDV 253

Query: 281 EGIIVKNCTLMNTSNGVRIKTWPASPAAGTASDMHYEDIIMVNVSNPVLIDQEYCPYNQ 338
            GI V NCTL  T NG+RIKTWP++  + TAS++H+E+II+ NVSNP+LIDQEYCP+NQ
Sbjct: 254 SGIRVINCTLQETDNGLRIKTWPSAACSTTASNIHFENIILRNVSNPILIDQEYCPWNQ 309

[Close]

BLAST of CaUC08G146900 vs. TAIR 10
Match: AT3G07850.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 303.1 bits (775), Expect = 2.7e-82
Identity = 145/289 (50.17%), Postives = 195/289 (67.47%), Query Frame = 0


Query: 54  DVTKYGAVPDA--DISQALKDAWKEACASTTQSKLVIPKATYKLSAVELVGPCKSPIEIQ 113
           DV   GA  D+  D S A   AWKEACA+   S + +PK  Y + ++E  GPCK P+ ++
Sbjct: 71  DVKASGAKGDSKTDDSAAFAAAWKEACAA--GSTITVPKGEYMVESLEFKGPCKGPVTLE 130

Query: 114 LQGTLQAPPDLTGD----GWVSFRYIDYFTLTGG-GVLDGQGKAAWEKNDCHKNTKCDPI 173
           L G  +AP  +       GW+ F  I  FTL G   + DGQG  AW+ NDC K  KC+ +
Sbjct: 131 LNGNFKAPATVKTTKPHAGWIDFENIADFTLNGNKAIFDGQGSLAWKANDCAKTGKCNSL 190

Query: 174 PMTLKLSFISNGIVSDVTSKDSKNFHVNVLGCKNLTFQHFTINAPETSINTDGIHIGRSV 233
           P+ ++ + ++N  ++ +TS +SK FH+N+L CKN+T     I+AP  S+NTDGIHIGRS 
Sbjct: 191 PINIRFTGLTNSKINSITSTNSKLFHMNILNCKNITLSDIGIDAPPESLNTDGIHIGRSN 250

Query: 234 GINVLNTNIATGDDCISLGDGSKQVTITNVTCGPGHGISVGSLGRYNAEEPVEGIIVKNC 293
           G+N++   I TGDDC+S+GDG++ + + NV CGPGHGIS+GSLGRY  E+PV+G+ V+ C
Sbjct: 251 GVNLIGAKIKTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKGVTVRKC 310

Query: 294 TLMNTSNGVRIKTWPASPAAGTASDMHYEDIIMVNVSNPVLIDQEYCPY 336
            + NT NGVRIKTWP SP  G AS++ +EDI M NVS PVLIDQEYCPY
Sbjct: 311 LIKNTDNGVRIKTWPGSP-PGIASNILFEDITMDNVSLPVLIDQEYCPY 356

The following BLAST results are available for this feature:

BLAST of CaUC08G146900 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022157387.1	2.7e-140	76.95	exopolygalacturonase-like [Momordica charantia] >XP_022159278.1 exopolygalacturo...	[more]
XP_008459709.2	7.6e-135	79.37	PREDICTED: exopolygalacturonase-like [Cucumis melo]	[more]
KAA0039364.1	7.6e-135	79.37	exopolygalacturonase-like [Cucumis melo var. makuwa] >TYK00547.1 exopolygalactur...	[more]
XP_022150984.1	6.4e-134	75.57	exopolygalacturonase-like [Momordica charantia]	[more]
XP_038889253.1	2.8e-129	70.87	exopolygalacturonase-like [Benincasa hispida]	[more]

BLAST of CaUC08G146900 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P24548	1.4e-99	62.45	Exopolygalacturonase (Fragment) OS=Oenothera organensis OX=3945 PE=2 SV=1	[more]
Q40312	1.8e-99	56.37	Polygalacturonase OS=Medicago sativa OX=3879 PE=2 SV=1	[more]
Q05967	9.4e-96	54.81	Polygalacturonase OS=Nicotiana tabacum OX=4097 GN=PG1 PE=2 SV=1	[more]
Q39766	8.0e-95	51.90	Polygalacturonase OS=Gossypium barbadense OX=3634 GN=G9 PE=2 SV=1	[more]
Q39786	8.0e-95	51.90	Polygalacturonase OS=Gossypium hirsutum OX=3635 GN=G9 PE=2 SV=1	[more]

BLAST of CaUC08G146900 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DUC6	1.3e-140	76.95	exopolygalacturonase-like OS=Momordica charantia OX=3673 GN=LOC111024096 PE=3 SV...	[more]
A0A5A7T7B3	3.7e-135	79.37	Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S3CC08	3.7e-135	79.37	exopolygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103498752 PE=3 SV=1	[more]
A0A6J1DBN7	3.1e-134	75.57	exopolygalacturonase-like OS=Momordica charantia OX=3673 GN=LOC111019009 PE=3 SV...	[more]
A0A6J1HJP4	4.3e-128	68.83	exopolygalacturonase-like OS=Cucurbita maxima OX=3661 GN=LOC111465122 PE=3 SV=1	[more]

BLAST of CaUC08G146900 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G07820.1	2.6e-93	54.85	Pectin lyase-like superfamily protein	[more]
AT3G07840.1	3.4e-93	53.04	Pectin lyase-like superfamily protein	[more]
AT5G48140.1	2.2e-92	52.17	Pectin lyase-like superfamily protein	[more]
AT3G07830.1	2.5e-91	52.17	Pectin lyase-like superfamily protein	[more]
AT3G07850.1	2.7e-82	50.17	Pectin lyase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006626	Parallel beta-helix repeat	SMART	SM00710	pbh1	coord: 248..268 e-value: 2000.0 score: 5.0 coord: 278..299 e-value: 2.3 score: 17.2 coord: 225..246 e-value: 3200.0 score: 3.6 coord: 198..224 e-value: 580.0 score: 8.9
IPR000743	Glycoside hydrolase, family 28	PFAM	PF00295	Glyco_hydro_28	coord: 78..336 e-value: 1.9E-84 score: 283.5
IPR000743	Glycoside hydrolase, family 28	PROSITE	PS00502	POLYGALACTURONASE	coord: 255..268
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 39..337 e-value: 1.1E-88 score: 299.9
None	No IPR available	PANTHER	PTHR31375:SF248	POLYGALACTURONASE	coord: 42..336
None	No IPR available	PANTHER	PTHR31375	FAMILY NOT NAMED	coord: 42..336
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 39..336

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC08G146900.1	CaUC08G146900.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
molecular_function	GO:0004650	polygalacturonase activity