CaUC08G146690 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC08G146690
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	MRN complex-interacting protein isoform X1
Location	Ciama_Chr08: 17788908 .. 17790094 (-)
RNA-Seq Expression	CaUC08G146690
Synteny	CaUC08G146690

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGACGATCTTCATCGCCGTCCAGTGTTTTCAATGCTCCACCATGCAGGTACCGATCTCTTTCTCTCTGTTTCTTAATCCTTCAATGTCTCTCTCCGTAACTTCTGTAAGGGCGGTGGTTTCGATTTAGGTGAAGCAGCAGCGAAAGAGCGGGAATAAGTGGATCTGTGCAGTGTGTAACGAGAGGCAATCGGTGCAGAAGGTGTTTGCTCGAGGTCCTATGGCTAAAGACGTCCGTAAATTCGTACAGAGCTTCAATATGTCTCGGAAATATGCGGATGAACAGATGAAAGTCGATGAACTACTTGACGGAGGAACTGTCGACGACGATGAGCTTGATTGCAGCGCGAGGAGAAAAAGACGTAACGATTGGAGTGAATATCTCGATCCCGAGGAAGATCGCAGCGAAAGAGGAAGAGAAAACGCACGAGAATTAGGTCACTCAATTTTTAAATTAGCTTTTTCTTCAATTTCGTAGTAAAATCTTCATTAAATGATGATCTTTTCTCTGGATCAGGGAGTGATTTTATTGACGGAAAGATTGTGACGGAGCTTCCAGAAGTTAAAACTAGGAAATCTGATTCAACGAGCTGTTCAAGCTGGTCGGAAGGAGGAGAAGGCGATGGATTTTACAGACCAATTTTCTCGAAGAGGAAACATATTGCCAAGAATTTGAGCTCCCAAGGTAAAATTCGATGCTCATATAACTTATTGTACTTTTTCAAGACAAAAAAATAGAGCAAAAACGGCCAAAAAATTGCAGTTGAGGTTCAAAACTGGGGGTCTCCATCAGCAATTCACACATCGAAATGGATTAAAGGCGATGATAAACTAATTTTCTCGAAGGCTAAGAACTTGAGTGCGCCTTTCCTGGACAAAAAGATGAGCAAGAACAGTCATAAAATTGGAGATGAGATTCAAAACTGGGAGTTGCCATCGGACATTGAGGCATCAAAATGGAGTAGTAAAGGTATGTCAAAAGATGATGAAAATGCAAGGACGAAAAGTTGCATATTAGCAAAGGCAAGAGGATCTTCTAAGTGGAGTGAATACATAACTGAAGAAGAGAACTGTGGAGGCGGAAATGGAGAAAATAGGGCAGCAGAAGAGGGCATAGATATCTTGAAGATGATGATGATAAATGATGAAATTGTTGAAGACGATATCCACCCTGATTTCAAATGA

mRNA sequence

ATGGCGACGATCTTCATCGCCGTCCAGTGTTTTCAATGCTCCACCATGCAGGTGAAGCAGCAGCGAAAGAGCGGGAATAAGTGGATCTGTGCAGTGTGTAACGAGAGGCAATCGGTGCAGAAGGTGTTTGCTCGAGGTCCTATGGCTAAAGACGTCCGTAAATTCGTACAGAGCTTCAATATGTCTCGGAAATATGCGGATGAACAGATGAAAGTCGATGAACTACTTGACGGAGGAACTGTCGACGACGATGAGCTTGATTGCAGCGCGAGGAGAAAAAGACGTAACGATTGGAGTGAATATCTCGATCCCGAGGAAGATCGCAGCGAAAGAGGAAGAGAAAACGCACGAGAATTAGGGAGTGATTTTATTGACGGAAAGATTGTGACGGAGCTTCCAGAAGTTAAAACTAGGAAATCTGATTCAACGAGCTGTTCAAGCTGGTCGGAAGGAGGAGAAGGCGATGGATTTTACAGACCAATTTTCTCGAAGAGGAAACATATTGCCAAGAATTTGAGCTCCCAAGTTGAGGTTCAAAACTGGGGGTCTCCATCAGCAATTCACACATCGAAATGGATTAAAGGCGATGATAAACTAATTTTCTCGAAGGCTAAGAACTTGAGTGCGCCTTTCCTGGACAAAAAGATGAGCAAGAACAGTCATAAAATTGGAGATGAGATTCAAAACTGGGAGTTGCCATCGGACATTGAGGCATCAAAATGGAGTAGTAAAGGTATGTCAAAAGATGATGAAAATGCAAGGACGAAAAGTTGCATATTAGCAAAGGCAAGAGGATCTTCTAAGTGGAGTGAATACATAACTGAAGAAGAGAACTGTGGAGGCGGAAATGGAGAAAATAGGGCAGCAGAAGAGGGCATAGATATCTTGAAGATGATGATGATAAATGATGAAATTGTTGAAGACGATATCCACCCTGATTTCAAATGA

Coding sequence (CDS)

ATGGCGACGATCTTCATCGCCGTCCAGTGTTTTCAATGCTCCACCATGCAGGTGAAGCAGCAGCGAAAGAGCGGGAATAAGTGGATCTGTGCAGTGTGTAACGAGAGGCAATCGGTGCAGAAGGTGTTTGCTCGAGGTCCTATGGCTAAAGACGTCCGTAAATTCGTACAGAGCTTCAATATGTCTCGGAAATATGCGGATGAACAGATGAAAGTCGATGAACTACTTGACGGAGGAACTGTCGACGACGATGAGCTTGATTGCAGCGCGAGGAGAAAAAGACGTAACGATTGGAGTGAATATCTCGATCCCGAGGAAGATCGCAGCGAAAGAGGAAGAGAAAACGCACGAGAATTAGGGAGTGATTTTATTGACGGAAAGATTGTGACGGAGCTTCCAGAAGTTAAAACTAGGAAATCTGATTCAACGAGCTGTTCAAGCTGGTCGGAAGGAGGAGAAGGCGATGGATTTTACAGACCAATTTTCTCGAAGAGGAAACATATTGCCAAGAATTTGAGCTCCCAAGTTGAGGTTCAAAACTGGGGGTCTCCATCAGCAATTCACACATCGAAATGGATTAAAGGCGATGATAAACTAATTTTCTCGAAGGCTAAGAACTTGAGTGCGCCTTTCCTGGACAAAAAGATGAGCAAGAACAGTCATAAAATTGGAGATGAGATTCAAAACTGGGAGTTGCCATCGGACATTGAGGCATCAAAATGGAGTAGTAAAGGTATGTCAAAAGATGATGAAAATGCAAGGACGAAAAGTTGCATATTAGCAAAGGCAAGAGGATCTTCTAAGTGGAGTGAATACATAACTGAAGAAGAGAACTGTGGAGGCGGAAATGGAGAAAATAGGGCAGCAGAAGAGGGCATAGATATCTTGAAGATGATGATGATAAATGATGAAATTGTTGAAGACGATATCCACCCTGATTTCAAATGA

Protein sequence

MATIFIAVQCFQCSTMQVKQQRKSGNKWICAVCNERQSVQKVFARGPMAKDVRKFVQSFNMSRKYADEQMKVDELLDGGTVDDDELDCSARRKRRNDWSEYLDPEEDRSERGRENARELGSDFIDGKIVTELPEVKTRKSDSTSCSSWSEGGEGDGFYRPIFSKRKHIAKNLSSQVEVQNWGSPSAIHTSKWIKGDDKLIFSKAKNLSAPFLDKKMSKNSHKIGDEIQNWELPSDIEASKWSSKGMSKDDENARTKSCILAKARGSSKWSEYITEEENCGGGNGENRAAEEGIDILKMMMINDEIVEDDIHPDFK

Homology

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BLAST of CaUC08G146690 vs. NCBI nr
Match: XP_038885326.1 (MRN complex-interacting protein [Benincasa hispida])

HSP 1 Score: 489.2 bits (1258), Expect = 2.7e-134
Identity = 255/316 (80.70%), Postives = 274/316 (86.71%), Query Frame = 0


Query: 1   MATIFIAVQCFQCSTMQVKQQRKSGNKWICAVCNERQSVQKVFARGPMAKDVRKFVQSFN 60
           MATIFIAVQCFQCSTMQVKQQRKSGN+WICAVCNE+QS+QKVFAR  MAKDVRKFVQ+FN
Sbjct: 1   MATIFIAVQCFQCSTMQVKQQRKSGNRWICAVCNEKQSLQKVFARASMAKDVRKFVQNFN 60

Query: 61  MSRKYADEQMKVDELLDGGTVDDDELDCSARRKRRNDWSEYLDPEEDRSERGRENARELG 120
           MSRKYADEQ K DELLDGG VD+D+LDCSARRKRRNDWSEYLDPEEDRS  GREN  EL 
Sbjct: 61  MSRKYADEQAKADELLDGGIVDEDKLDCSARRKRRNDWSEYLDPEEDRSHNGRENEGELE 120

Query: 121 SDFIDGKIVTELPEVKTRKSDSTSCSSWSEGGEGDGFYRPIFSKRKHIAKNLSSQVEVQN 180
           S+  D KIVTE+PEVKTRKS STSCS WSE GEGDGFYRPIFSKRKHIA NLSSQ EV+N
Sbjct: 121 SESTDEKIVTEIPEVKTRKSGSTSCSRWSE-GEGDGFYRPIFSKRKHIANNLSSQDEVRN 180

Query: 181 WGSPSAIHTSKWIKGDDKLIFSKAKNLSAPFLDKKMSKNSHKIGDEIQNWELPSDIEASK 240
           W S S I T KW KG+D+ I SKAKNLSAPF DKKMSKNSHKI DEIQNWEL S+IEASK
Sbjct: 181 WESTSTIQTMKWSKGNDEQIISKAKNLSAPFQDKKMSKNSHKIADEIQNWELQSEIEASK 240

Query: 241 WSSKGMSKDDENARTKSCILAKARG-SSKWSEYITEEENCGGGNGENRAAEEGIDILKMM 300
             SK MSKDDEN+RTK+ ILAK RG SSKWSEYITEE+NC G NGEN A ++ IDILK  
Sbjct: 241 -GSKDMSKDDENSRTKTSILAKVRGPSSKWSEYITEEDNCRGRNGENMATDQCIDILK-K 300

Query: 301 MINDEIVEDDIHPDFK 316
           +INDEIV+DDIHPDFK
Sbjct: 301 IINDEIVDDDIHPDFK 313

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BLAST of CaUC08G146690 vs. NCBI nr
Match: XP_008456719.1 (PREDICTED: UPF0544 protein C5orf45 homolog [Cucumis melo] >KAA0031637.1 UPF0544 protein C5orf45-like protein [Cucumis melo var. makuwa] >TYK04473.1 UPF0544 protein C5orf45-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 486.9 bits (1252), Expect = 1.3e-133
Identity = 254/316 (80.38%), Postives = 270/316 (85.44%), Query Frame = 0


Query: 1   MATIFIAVQCFQCSTMQVKQQRKSGNKWICAVCNERQSVQKVFARGPMAKDVRKFVQSFN 60
           MATIFIAVQCFQCSTMQVKQQRKSGNKWICAVCNE+QSVQKVFAR PMAKDVRKFVQSFN
Sbjct: 1   MATIFIAVQCFQCSTMQVKQQRKSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFN 60

Query: 61  MSRKYADEQMKVDELLDGGTVDDDELDCSARRKRRNDWSEYLDPEEDRSERGRENARELG 120
           MSRKYA+EQ  VD+L+ GG VDDD+LDCS RRKRRNDWSEYLDPEEDRS  GREN  EL 
Sbjct: 61  MSRKYANEQANVDDLIHGGIVDDDKLDCSGRRKRRNDWSEYLDPEEDRSHSGRENEGELE 120

Query: 121 SDFIDGKIVTELPEVKTRKSDSTSCSSWSEGGEGDGFYRPIFSKRKHIAKNLSSQVEVQN 180
           SD    KI TELP++KT KS S SCSSWSE GEGDG YRP+FSKRKHIAKNLSSQ E+QN
Sbjct: 121 SDL---KIATELPDIKTWKSGSRSCSSWSE-GEGDGLYRPLFSKRKHIAKNLSSQDEIQN 180

Query: 181 WGSPSAIHTSKWIKGDDKLIFSKAKNLSAPFLDKKMSKNSHKIGDEIQNWELPSDIEASK 240
           W SPSAIHTSK  KGDD+  FS AK LSAPF DKKMSKNSHK+  EIQNWELPS+IEASK
Sbjct: 181 WESPSAIHTSKLSKGDDEQTFSTAKYLSAPFQDKKMSKNSHKVESEIQNWELPSEIEASK 240

Query: 241 WSSKGMSKDDENARTKSCILAKARG-SSKWSEYITEEENCGGGNGENRAAEEGIDILKMM 300
           W     +KDDEN+RTKSCIL K RG SSKWSEYITEEENCGG N EN A E+G+DILK  
Sbjct: 241 W-----TKDDENSRTKSCILGKVRGASSKWSEYITEEENCGGRNEENMAREQGMDILK-- 300

Query: 301 MINDEIVEDDIHPDFK 316
           MINDEIVEDDIHPDFK
Sbjct: 301 MINDEIVEDDIHPDFK 305

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BLAST of CaUC08G146690 vs. NCBI nr
Match: XP_004141004.1 (MRN complex-interacting protein [Cucumis sativus] >KGN46102.1 hypothetical protein Csa_005258 [Cucumis sativus])

HSP 1 Score: 476.5 bits (1225), Expect = 1.8e-130
Identity = 247/316 (78.16%), Postives = 265/316 (83.86%), Query Frame = 0


Query: 1   MATIFIAVQCFQCSTMQVKQQRKSGNKWICAVCNERQSVQKVFARGPMAKDVRKFVQSFN 60
           MATIFIAVQCFQCSTMQVKQQRKSGNKWICAVCN++QSVQKVFAR PMAKDVRKFVQSFN
Sbjct: 1   MATIFIAVQCFQCSTMQVKQQRKSGNKWICAVCNQKQSVQKVFARAPMAKDVRKFVQSFN 60

Query: 61  MSRKYADEQMKVDELLDGGTVDDDELDCSARRKRRNDWSEYLDPEEDRSERGRENARELG 120
           MSRKYA+EQ  VDEL+DGG VDDD+L CS RRK R+DWS+YLDP EDRS  GREN  EL 
Sbjct: 61  MSRKYANEQANVDELIDGGIVDDDKLVCSGRRKSRSDWSDYLDPVEDRSHSGRENEVELE 120

Query: 121 SDFIDGKIVTELPEVKTRKSDSTSCSSWSEGGEGDGFYRPIFSKRKHIAKNLSSQVEVQN 180
           SD    KIVTELP++KT KS S SCSSWSE GEGDG YRP+FSKRKHIA NLSSQ E++N
Sbjct: 121 SDL---KIVTELPDIKTWKSGSRSCSSWSEEGEGDGLYRPLFSKRKHIANNLSSQDEIRN 180

Query: 181 WGSPSAIHTSKWIKGDDKLIFSKAKNLSAPFLDKKMSKNSHKIGDEIQNWELPSDIEASK 240
           W SPSAIH SK  KGDD+   S AK LSAPF DKKM KN HK+ DEIQNWELPS+IEASK
Sbjct: 181 WESPSAIHASKLSKGDDEQTLSTAKYLSAPFQDKKMGKNGHKVEDEIQNWELPSEIEASK 240

Query: 241 WSSKGMSKDDENARTKSCILAKARG-SSKWSEYITEEENCGGGNGENRAAEEGIDILKMM 300
           W     SKDDEN RTKSCIL K RG SSKWSEYITEEENCGG N EN A EEG+D+LK M
Sbjct: 241 W-----SKDDENLRTKSCILGKVRGASSKWSEYITEEENCGGRNEENMAREEGMDVLK-M 300

Query: 301 MINDEIVEDDIHPDFK 316
           MIN+EIVEDDIHPDFK
Sbjct: 301 MINEEIVEDDIHPDFK 307

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BLAST of CaUC08G146690 vs. NCBI nr
Match: XP_023549686.1 (MRN complex-interacting protein isoform X2 [Cucurbita pepo subsp. pepo] >XP_023549687.1 MRN complex-interacting protein isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 378.6 bits (971), Expect = 5.1e-101
Identity = 217/319 (68.03%), Postives = 238/319 (74.61%), Query Frame = 0


Query: 1   MATIFIAVQCFQCSTMQVKQQRKSGNKWICAVCNERQSVQKVFARGPMAKDVRKFVQSFN 60
           M+TIFIAVQCFQCSTMQVKQQR+SGNKWICAVCNE+QSVQKVFAR PMAKDVRKFVQSFN
Sbjct: 1   MSTIFIAVQCFQCSTMQVKQQRRSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFN 60

Query: 61  MSRKYADEQMKVDELLDGGTVDDDELDCSARRKRRNDWSEYLDPEEDRSERGRENARELG 120
           MSRKYADEQ KVDE+LD   VD+D+LD +A+RKRR+DWSEYLD EEDRS+ GREN RELG
Sbjct: 61  MSRKYADEQTKVDEILDEEIVDEDQLDFNAKRKRRSDWSEYLDLEEDRSQTGRENERELG 120

Query: 121 SDFIDGKIVTELPEVKTRKSDSTSCSSWSEGGEGDGFYRPIFSKRKHIAKNLSSQVEVQN 180
           SDF DGKIVTELPE KTRK  STSCSS  EGGEG  FYRP+F KR HIAKN         
Sbjct: 121 SDFTDGKIVTELPEEKTRKHCSTSCSSRPEGGEGKRFYRPVFPKRTHIAKN--------- 180

Query: 181 WGSPSAIHTSKWIKG---DDKLIFSKAKNLSAPFLDKKMSKNSHKIGDEIQNWELPSDIE 240
               SAI  SKW KG   DD+ +  KA NLS+               DEI+NWE  SDIE
Sbjct: 181 ----SAIQASKWRKGVREDDEKVSLKA-NLSSK--------------DEIRNWESQSDIE 240

Query: 241 ASKWSSKGMSKDDENARTKSCILAKARG-SSKWSEYITEEENCGGGNGENRAAEEGIDIL 300
           ASKW SKGMSKDDENA    CILAK  G S KWSEY+TEE+       +N   E+ +D L
Sbjct: 241 ASKW-SKGMSKDDENA----CILAKVGGPSPKWSEYMTEED-------KNMGTEQDMDTL 278

Query: 301 KMMMINDEIVEDDIHPDFK 316
           K M+INDEIVEDDIHPDFK
Sbjct: 301 K-MIINDEIVEDDIHPDFK 278

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BLAST of CaUC08G146690 vs. NCBI nr
Match: XP_023549685.1 (MRN complex-interacting protein isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 372.9 bits (956), Expect = 2.8e-99
Identity = 218/340 (64.12%), Postives = 239/340 (70.29%), Query Frame = 0


Query: 1   MATIFIAVQCFQCSTMQVKQQRKSGNKWICAVCNERQSVQKVFARGPMAKDVRKFVQSFN 60
           M+TIFIAVQCFQCSTMQVKQQR+SGNKWICAVCNE+QSVQKVFAR PMAKDVRKFVQSFN
Sbjct: 1   MSTIFIAVQCFQCSTMQVKQQRRSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFN 60

Query: 61  MSRKYADEQMKVDELLDGGTVDDDELDCSARRKRRNDWSEYLDPEEDRSERGRENARELG 120
           MSRKYADEQ KVDE+LD   VD+D+LD +A+RKRR+DWSEYLD EEDRS+ GREN RELG
Sbjct: 61  MSRKYADEQTKVDEILDEEIVDEDQLDFNAKRKRRSDWSEYLDLEEDRSQTGRENERELG 120

Query: 121 SDFIDGKIVTELPEVKTRKSDSTSCSSWSEGGEGDGFYRPIFSKRKHIAKNLSSQVEVQN 180
           SDF DGKIVTELPE KTRK  STSCSS  EGGEG  FYRP+F KR HIAKN         
Sbjct: 121 SDFTDGKIVTELPEEKTRKHCSTSCSSRPEGGEGKRFYRPVFPKRTHIAKN--------- 180

Query: 181 WGSPSAIHTSKWIKG---DDKLIFSKAKNLSAPFLDKKMSKNSHKIGDEIQNWELPSDIE 240
               SAI  SKW KG   DD+ +  KA NLS+               DEI+NWE  SDIE
Sbjct: 181 ----SAIQASKWRKGVREDDEKVSLKA-NLSSK--------------DEIRNWESQSDIE 240

Query: 241 ASKWSSKGMSKDDENARTKSCILAKARG-SSKWSEYITEEENCGGGNGENRAAEEGIDIL 300
           ASKW SKGMSKDDENA    CILAK  G S KWSEY+TEE+       +N   E+ +D L
Sbjct: 241 ASKW-SKGMSKDDENA----CILAKVGGPSPKWSEYMTEED-------KNMGTEQDMDTL 300

Query: 301 KM---------------------MMINDEIVEDDIHPDFK 316
           KM                     M+INDEIVEDDIHPDFK
Sbjct: 301 KMIINDEIVEDDMGTEQDMDTLKMIINDEIVEDDIHPDFK 300

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BLAST of CaUC08G146690 vs. ExPASy Swiss-Prot
Match: Q32PP1 (MRN complex-interacting protein OS=Danio rerio OX=7955 GN=mrnip PE=2 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.5e-07
Identity = 61/224 (27.23%), Postives = 95/224 (42.41%), Query Frame = 0


Query: 1   MATIFIAVQCFQCSTMQVKQQRKSGNKWICAVCNERQSVQKVFARGPMAKDVRKFVQSFN 60
           M   F  ++CF C T QV QQ K   KW C VC E+QS+ K F RG  A D R+ VQ  N
Sbjct: 1   MVQEFNVLRCFSCQTFQV-QQVKKAKKWTCKVCGEKQSLIKEFGRG-AAADCRRHVQKLN 60

Query: 61  MSRKYADEQMKVDELLDGGTVDDDE------LDCSARRKRR--NDWSEYLDPEEDRSERG 120
             R     Q+   +LL  G  +++       LD  + ++    + WS+Y D   +     
Sbjct: 61  ALRG-EQHQLNTQQLLAQGDEENENEDVYEVLDPKSEQEEAHVSRWSKYTDQTTEGPNEE 120

Query: 121 RENARELGSDFIDGKIVTELPEVK---TRKSDSTS--------CSSWSEGGEGDGFYRPI 180
           +++  E      D  + TE P+ +   TRK    S        C ++ E   G   +R  
Sbjct: 121 KDDEDE------DENVYTERPQFRIQGTRKRKKMSSLEPFGGNCDNYEESRAGYSQFR-- 180

Query: 181 FSKRKHIAKNLSSQVEVQNWGSPSAIHTSKWIKGDDKLIFSKAK 206
             K+ ++   L  +    +W   S    S   + DD +  ++ K
Sbjct: 181 --KQAYLPLQLEKR-SSSSWNKGSVSKYSNCQRPDDVVPSARTK 210

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BLAST of CaUC08G146690 vs. ExPASy TrEMBL
Match: A0A5D3BXL1 (UPF0544 protein C5orf45-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G00830 PE=4 SV=1)

HSP 1 Score: 486.9 bits (1252), Expect = 6.5e-134
Identity = 254/316 (80.38%), Postives = 270/316 (85.44%), Query Frame = 0


Query: 1   MATIFIAVQCFQCSTMQVKQQRKSGNKWICAVCNERQSVQKVFARGPMAKDVRKFVQSFN 60
           MATIFIAVQCFQCSTMQVKQQRKSGNKWICAVCNE+QSVQKVFAR PMAKDVRKFVQSFN
Sbjct: 1   MATIFIAVQCFQCSTMQVKQQRKSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFN 60

Query: 61  MSRKYADEQMKVDELLDGGTVDDDELDCSARRKRRNDWSEYLDPEEDRSERGRENARELG 120
           MSRKYA+EQ  VD+L+ GG VDDD+LDCS RRKRRNDWSEYLDPEEDRS  GREN  EL 
Sbjct: 61  MSRKYANEQANVDDLIHGGIVDDDKLDCSGRRKRRNDWSEYLDPEEDRSHSGRENEGELE 120

Query: 121 SDFIDGKIVTELPEVKTRKSDSTSCSSWSEGGEGDGFYRPIFSKRKHIAKNLSSQVEVQN 180
           SD    KI TELP++KT KS S SCSSWSE GEGDG YRP+FSKRKHIAKNLSSQ E+QN
Sbjct: 121 SDL---KIATELPDIKTWKSGSRSCSSWSE-GEGDGLYRPLFSKRKHIAKNLSSQDEIQN 180

Query: 181 WGSPSAIHTSKWIKGDDKLIFSKAKNLSAPFLDKKMSKNSHKIGDEIQNWELPSDIEASK 240
           W SPSAIHTSK  KGDD+  FS AK LSAPF DKKMSKNSHK+  EIQNWELPS+IEASK
Sbjct: 181 WESPSAIHTSKLSKGDDEQTFSTAKYLSAPFQDKKMSKNSHKVESEIQNWELPSEIEASK 240

Query: 241 WSSKGMSKDDENARTKSCILAKARG-SSKWSEYITEEENCGGGNGENRAAEEGIDILKMM 300
           W     +KDDEN+RTKSCIL K RG SSKWSEYITEEENCGG N EN A E+G+DILK  
Sbjct: 241 W-----TKDDENSRTKSCILGKVRGASSKWSEYITEEENCGGRNEENMAREQGMDILK-- 300

Query: 301 MINDEIVEDDIHPDFK 316
           MINDEIVEDDIHPDFK
Sbjct: 301 MINDEIVEDDIHPDFK 305

[Close]

BLAST of CaUC08G146690 vs. ExPASy TrEMBL
Match: A0A1S3C3H7 (UPF0544 protein C5orf45 homolog OS=Cucumis melo OX=3656 GN=LOC103496578 PE=4 SV=1)

HSP 1 Score: 486.9 bits (1252), Expect = 6.5e-134
Identity = 254/316 (80.38%), Postives = 270/316 (85.44%), Query Frame = 0


Query: 1   MATIFIAVQCFQCSTMQVKQQRKSGNKWICAVCNERQSVQKVFARGPMAKDVRKFVQSFN 60
           MATIFIAVQCFQCSTMQVKQQRKSGNKWICAVCNE+QSVQKVFAR PMAKDVRKFVQSFN
Sbjct: 1   MATIFIAVQCFQCSTMQVKQQRKSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFN 60

Query: 61  MSRKYADEQMKVDELLDGGTVDDDELDCSARRKRRNDWSEYLDPEEDRSERGRENARELG 120
           MSRKYA+EQ  VD+L+ GG VDDD+LDCS RRKRRNDWSEYLDPEEDRS  GREN  EL 
Sbjct: 61  MSRKYANEQANVDDLIHGGIVDDDKLDCSGRRKRRNDWSEYLDPEEDRSHSGRENEGELE 120

Query: 121 SDFIDGKIVTELPEVKTRKSDSTSCSSWSEGGEGDGFYRPIFSKRKHIAKNLSSQVEVQN 180
           SD    KI TELP++KT KS S SCSSWSE GEGDG YRP+FSKRKHIAKNLSSQ E+QN
Sbjct: 121 SDL---KIATELPDIKTWKSGSRSCSSWSE-GEGDGLYRPLFSKRKHIAKNLSSQDEIQN 180

Query: 181 WGSPSAIHTSKWIKGDDKLIFSKAKNLSAPFLDKKMSKNSHKIGDEIQNWELPSDIEASK 240
           W SPSAIHTSK  KGDD+  FS AK LSAPF DKKMSKNSHK+  EIQNWELPS+IEASK
Sbjct: 181 WESPSAIHTSKLSKGDDEQTFSTAKYLSAPFQDKKMSKNSHKVESEIQNWELPSEIEASK 240

Query: 241 WSSKGMSKDDENARTKSCILAKARG-SSKWSEYITEEENCGGGNGENRAAEEGIDILKMM 300
           W     +KDDEN+RTKSCIL K RG SSKWSEYITEEENCGG N EN A E+G+DILK  
Sbjct: 241 W-----TKDDENSRTKSCILGKVRGASSKWSEYITEEENCGGRNEENMAREQGMDILK-- 300

Query: 301 MINDEIVEDDIHPDFK 316
           MINDEIVEDDIHPDFK
Sbjct: 301 MINDEIVEDDIHPDFK 305

[Close]

BLAST of CaUC08G146690 vs. ExPASy TrEMBL
Match: A0A0A0KCJ3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G052770 PE=4 SV=1)

HSP 1 Score: 476.5 bits (1225), Expect = 8.7e-131
Identity = 247/316 (78.16%), Postives = 265/316 (83.86%), Query Frame = 0


Query: 1   MATIFIAVQCFQCSTMQVKQQRKSGNKWICAVCNERQSVQKVFARGPMAKDVRKFVQSFN 60
           MATIFIAVQCFQCSTMQVKQQRKSGNKWICAVCN++QSVQKVFAR PMAKDVRKFVQSFN
Sbjct: 1   MATIFIAVQCFQCSTMQVKQQRKSGNKWICAVCNQKQSVQKVFARAPMAKDVRKFVQSFN 60

Query: 61  MSRKYADEQMKVDELLDGGTVDDDELDCSARRKRRNDWSEYLDPEEDRSERGRENARELG 120
           MSRKYA+EQ  VDEL+DGG VDDD+L CS RRK R+DWS+YLDP EDRS  GREN  EL 
Sbjct: 61  MSRKYANEQANVDELIDGGIVDDDKLVCSGRRKSRSDWSDYLDPVEDRSHSGRENEVELE 120

Query: 121 SDFIDGKIVTELPEVKTRKSDSTSCSSWSEGGEGDGFYRPIFSKRKHIAKNLSSQVEVQN 180
           SD    KIVTELP++KT KS S SCSSWSE GEGDG YRP+FSKRKHIA NLSSQ E++N
Sbjct: 121 SDL---KIVTELPDIKTWKSGSRSCSSWSEEGEGDGLYRPLFSKRKHIANNLSSQDEIRN 180

Query: 181 WGSPSAIHTSKWIKGDDKLIFSKAKNLSAPFLDKKMSKNSHKIGDEIQNWELPSDIEASK 240
           W SPSAIH SK  KGDD+   S AK LSAPF DKKM KN HK+ DEIQNWELPS+IEASK
Sbjct: 181 WESPSAIHASKLSKGDDEQTLSTAKYLSAPFQDKKMGKNGHKVEDEIQNWELPSEIEASK 240

Query: 241 WSSKGMSKDDENARTKSCILAKARG-SSKWSEYITEEENCGGGNGENRAAEEGIDILKMM 300
           W     SKDDEN RTKSCIL K RG SSKWSEYITEEENCGG N EN A EEG+D+LK M
Sbjct: 241 W-----SKDDENLRTKSCILGKVRGASSKWSEYITEEENCGGRNEENMAREEGMDVLK-M 300

Query: 301 MINDEIVEDDIHPDFK 316
           MIN+EIVEDDIHPDFK
Sbjct: 301 MINEEIVEDDIHPDFK 307

[Close]

BLAST of CaUC08G146690 vs. ExPASy TrEMBL
Match: A0A6J1FH51 (MRN complex-interacting protein isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111445345 PE=4 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 5.7e-98
Identity = 210/319 (65.83%), Postives = 231/319 (72.41%), Query Frame = 0


Query: 1   MATIFIAVQCFQCSTMQVKQQRKSGNKWICAVCNERQSVQKVFARGPMAKDVRKFVQSFN 60
           M+TIFIAVQCFQCSTMQVKQQR+SGNKWICAVCNE+QSVQKVFAR PMAKDVRKFVQSFN
Sbjct: 1   MSTIFIAVQCFQCSTMQVKQQRRSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFN 60

Query: 61  MSRKYADEQMKVDELLDGGTVDDDELDCSARRKRRNDWSEYLDPEEDRSERGRENARELG 120
           MSRKYADEQ KVDE+LD   VD+D+LD +A+RKRR+DWSEYLD EEDRS+ GREN RELG
Sbjct: 61  MSRKYADEQTKVDEILDEEIVDEDQLDFNAKRKRRSDWSEYLDLEEDRSQTGRENERELG 120

Query: 121 SDFIDGKIVTELPEVKTRKSDSTSCSSWSEGGEGDGFYRPIFSKRKHIAKNLSSQVEVQN 180
           SDF DGK VTELPE KTRK  STSCSS  EG EG  FYRP+F KR HIAKN         
Sbjct: 121 SDFADGKFVTELPEEKTRKHCSTSCSSRPEGVEGKRFYRPVFPKRTHIAKN--------- 180

Query: 181 WGSPSAIHTSKWIKG---DDKLIFSKAKNLSAPFLDKKMSKNSHKIGDEIQNWELPSDIE 240
               SAI  SKW KG   DD+ +  KAK+     L  K         DEI+NWE PS   
Sbjct: 181 ----SAIQASKWRKGVREDDEKVSLKAKH----HLSSK---------DEIRNWESPS--- 240

Query: 241 ASKWSSKGMSKDDENARTKSCILAKARG-SSKWSEYITEEENCGGGNGENRAAEEGIDIL 300
                    SKDDE+A    CILAK  G SSKWSEYITE++NCGG  GEN   E+ +D L
Sbjct: 241 ---------SKDDESA----CILAKVGGPSSKWSEYITEDDNCGGRKGENMGTEQDMDTL 276

Query: 301 KMMMINDEIVEDDIHPDFK 316
           K M+ NDEIVEDDIHPDFK
Sbjct: 301 K-MITNDEIVEDDIHPDFK 276

[Close]

BLAST of CaUC08G146690 vs. ExPASy TrEMBL
Match: A0A6J1JWE4 (MRN complex-interacting protein isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488952 PE=4 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 5.9e-95
Identity = 203/318 (63.84%), Postives = 226/318 (71.07%), Query Frame = 0


Query: 1   MATIFIAVQCFQCSTMQVKQQRKSGNKWICAVCNERQSVQKVFARGPMAKDVRKFVQSFN 60
           M+TIFIAVQCFQCSTMQVKQQR+SGNKWICAVCNE+QSVQKVFAR PMAKDVRKFVQSFN
Sbjct: 1   MSTIFIAVQCFQCSTMQVKQQRRSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFN 60

Query: 61  MSRKYADEQMKVDELLDGGTVDDDELDCSARRKRRNDWSEYLDPEEDRSERGRENARELG 120
           MSRKYADEQ KVDE+ D   VD+D+LD + +RKRR+DWSEYLD EEDRS+ GREN RELG
Sbjct: 61  MSRKYADEQTKVDEIFDEEIVDEDQLDFNEKRKRRSDWSEYLDLEEDRSQTGRENERELG 120

Query: 121 SDFIDGKIVTELPEVKTRKSDSTSCSSWSEGGEGDGFYRPIFSKRKHIAKNLSSQVEVQN 180
           SDF DGKIVTELPE KTRK  STSCS+  E GEG  FYRP+F KR HIAKN         
Sbjct: 121 SDFADGKIVTELPEEKTRKHCSTSCSNRPESGEGKIFYRPVFPKRTHIAKN--------- 180

Query: 181 WGSPSAIHTSKWIKG---DDKLIFSKAKNLSAPFLDKKMSKNSHKIGDEIQNWELPSDIE 240
               SAI  SKW KG   DD+ +  KAK+     L  K         DEI+NWE  S   
Sbjct: 181 ----SAIQASKWSKGVREDDEKVSLKAKH----HLSSK---------DEIRNWESLS--- 240

Query: 241 ASKWSSKGMSKDDENARTKSCILAKARGSSKWSEYITEEENCGGGNGENRAAEEGIDILK 300
                    +KDDENA       +K  G SKWSEYITE++NCGG  GEN   E+ +D LK
Sbjct: 241 ---------TKDDENA------CSKVGGPSKWSEYITEDDNCGGRKGENMGTEQDMDTLK 273

Query: 301 MMMINDEIVEDDIHPDFK 316
            M+INDEIVEDDIHPDFK
Sbjct: 301 -MIINDEIVEDDIHPDFK 273

[Close]

BLAST of CaUC08G146690 vs. TAIR 10
Match: AT1G71760.1 (unknown protein; Has 92 Blast hits to 92 proteins in 41 species: Archae - 0; Bacteria - 0; Metazoa - 44; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). )

HSP 1 Score: 129.4 bits (324), Expect = 5.0e-30
Identity = 94/249 (37.75%), Postives = 137/249 (55.02%), Query Frame = 0


Query: 2   ATIFIAVQCFQCSTMQVKQQRKSGNKWICAVCNERQSVQKVFARGPMAKDVRKFVQSFNM 61
           +T+FIA+QC++CSTMQVKQ++KS NKW+C +CN++QSV+KVFA+G  AK++R FVQSFNM
Sbjct: 3   STLFIALQCYECSTMQVKQKKKSSNKWVCVICNQKQSVKKVFAQGYKAKELRFFVQSFNM 62

Query: 62  SRKYADEQM-KVDELLDGGTVDDDELDCSARRKRRNDWSEYLDPEEDRSERGRENARELG 121
           SRK ADE+   V +      V+ +  +     K+R+DWS+YLD +         + R L 
Sbjct: 63  SRKVADEEAHAVGDSFPEVYVEGEVNEEVNGTKKRSDWSQYLDFD------SVNDRRRLA 122

Query: 122 SDFIDGKIVTELP-----EVKTRKSDSTSCSSWSEGGE---GDGFYRPIFSKRKHIAKNL 181
            +  D KIVTE+P       K  K  +   SS + GGE    +  ++P FS+R     + 
Sbjct: 123 GEEDDVKIVTEMPSNMFKRPKLNKESNAGGSSSNTGGENKDSNEIFKPSFSRRSIKKPDF 182

Query: 182 SS--------QVEVQNWGSPSAIH-TSKWIKGDDKLIFSKAKNLSAP-FLDKKMSKNSHK 232
            S         +E +N  S       SKW   D  LI  + ++ + P F  KK  K+   
Sbjct: 183 RSDEVVTRKKDMEERNLESERVTKPASKW---DAYLIDDEGEHQAPPRFGVKKALKD--- 237

[Close]

BLAST of CaUC08G146690 vs. TAIR 10
Match: AT1G71760.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; Has 84 Blast hits to 84 proteins in 35 species: Archae - 0; Bacteria - 0; Metazoa - 42; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 127.9 bits (320), Expect = 1.5e-29
Identity = 94/262 (35.88%), Postives = 145/262 (55.34%), Query Frame = 0


Query: 2   ATIFIAVQCFQCSTMQVKQQRKSGNKWICAVCNERQSVQKVFARGPMAKDVRKFVQSFNM 61
           +T+FIA+QC++CSTMQVKQ++KS NKW+C +CN++QSV+KVFA+G  AK++R FVQSFNM
Sbjct: 3   STLFIALQCYECSTMQVKQKKKSSNKWVCVICNQKQSVKKVFAQGYKAKELRFFVQSFNM 62

Query: 62  SRKYADEQM-KVDELLDGGTVDDDELDCSARRKRRNDWSEYLDPEEDRSERGRENARELG 121
           SRK ADE+   V +      V+ +  +     K+R+DWS+YLD +         + R L 
Sbjct: 63  SRKVADEEAHAVGDSFPEVYVEGEVNEEVNGTKKRSDWSQYLDFD------SVNDRRRLA 122

Query: 122 SDFIDGKIVTELP-----EVKTRKSDSTSCSSWSEGGE---GDGFYRPIFSKRKHIAKNL 181
            +  D KIVTE+P       K  K  +   SS + GGE    +  ++P FS+R     + 
Sbjct: 123 GEEDDVKIVTEMPSNMFKRPKLNKESNAGGSSSNTGGENKDSNEIFKPSFSRRSIKKPDF 182

Query: 182 SS--QVEVQNWGSPSAIHTSKWIKGDDKLIFSKAKNLSAPFLDKKMSK-NSHKIGDEIQN 241
            S  +      G  SA  +++ +     +   + +NL +  + K  SK +++ I DE ++
Sbjct: 183 RSGKRSSATYVGHISAFSSNEVVTRKKDM---EERNLESERVTKPASKWDAYLIDDEGEH 242

Query: 242 WELPSDIEASKWSSKGMSKDDE 252
              P      ++  K   KDDE
Sbjct: 243 QAPP------RFGVKKALKDDE 249

The following BLAST results are available for this feature:

BLAST of CaUC08G146690 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038885326.1	2.7e-134	80.70	MRN complex-interacting protein [Benincasa hispida]	[more]
XP_008456719.1	1.3e-133	80.38	PREDICTED: UPF0544 protein C5orf45 homolog [Cucumis melo] >KAA0031637.1 UPF0544 ...	[more]
XP_004141004.1	1.8e-130	78.16	MRN complex-interacting protein [Cucumis sativus] >KGN46102.1 hypothetical prote...	[more]
XP_023549686.1	5.1e-101	68.03	MRN complex-interacting protein isoform X2 [Cucurbita pepo subsp. pepo] >XP_0235...	[more]
XP_023549685.1	2.8e-99	64.12	MRN complex-interacting protein isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CaUC08G146690 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q32PP1	1.5e-07	27.23	MRN complex-interacting protein OS=Danio rerio OX=7955 GN=mrnip PE=2 SV=1	[more]

BLAST of CaUC08G146690 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BXL1	6.5e-134	80.38	UPF0544 protein C5orf45-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S3C3H7	6.5e-134	80.38	UPF0544 protein C5orf45 homolog OS=Cucumis melo OX=3656 GN=LOC103496578 PE=4 SV=...	[more]
A0A0A0KCJ3	8.7e-131	78.16	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G052770 PE=4 SV=1	[more]
A0A6J1FH51	5.7e-98	65.83	MRN complex-interacting protein isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1JWE4	5.9e-95	63.84	MRN complex-interacting protein isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]

BLAST of CaUC08G146690 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G71760.1	5.0e-30	37.75	unknown protein; Has 92 Blast hits to 92 proteins in 41 species: Archae - 0; Bac...	[more]
AT1G71760.2	1.5e-29	35.88	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032739	MRN complex-interacting protein	PFAM	PF15749	MRNIP	coord: 8..150 e-value: 1.9E-20 score: 73.6
IPR032739	MRN complex-interacting protein	PANTHER	PTHR15863	MRN COMPLEX-INTERACTING PROTEIN	coord: 1..314

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC08G146690.1	CaUC08G146690.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007095	mitotic G2 DNA damage checkpoint signaling
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003682	chromatin binding