CaUC08G146480 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTACCTTTCAAAGCTCTTAATTCTCACATCTCTTCTAGTTTTTGCCTTCTCATTCATGGTGGAGTCTAGGCCAAACCCTAAAGTAAGCCTAGCTACACGATTGAATTTAGAACGCAATGCATCAGATTGTTGGGGATCGTTGTTTCGACTCGAAGCATGTAGCAGTGAAATTATCACATTCTTTCTCAATGGAAATATTAACTTAAGTCCCAACTGTTGTCGGTCGATCGAAATCATCCAACATAATTGTTGGCCAACATTACTCGGCTCGTTGGGATATACAGTAGAAGAAGCTAACATTCTAGAGGTCTATTGTGATACTAAAGGAAGCAAGCCTCCGACACCGCCATCATCTCCACTTGCACCATCCATTGAGCCTGAAGGTCTTGCTCCTTGA ATGGCTTACCTTTCAAAGCTCTTAATTCTCACATCTCTTCTAGTTTTTGCCTTCTCATTCATGGTGGAGTCTAGGCCAAACCCTAAAGTAAGCCTAGCTACACGATTGAATTTAGAACGCAATGCATCAGATTGTTGGGGATCGTTGTTTCGACTCGAAGCATGTAGCAGTGAAATTATCACATTCTTTCTCAATGGAAATATTAACTTAAGTCCCAACTGTTGTCGGTCGATCGAAATCATCCAACATAATTGTTGGCCAACATTACTCGGCTCGTTGGGATATACAGTAGAAGAAGCTAACATTCTAGAGGTCTATTGTGATACTAAAGGAAGCAAGCCTCCGACACCGCCATCATCTCCACTTGCACCATCCATTGAGCCTGAAGGTCTTGCTCCTTGA ATGGCTTACCTTTCAAAGCTCTTAATTCTCACATCTCTTCTAGTTTTTGCCTTCTCATTCATGGTGGAGTCTAGGCCAAACCCTAAAGTAAGCCTAGCTACACGATTGAATTTAGAACGCAATGCATCAGATTGTTGGGGATCGTTGTTTCGACTCGAAGCATGTAGCAGTGAAATTATCACATTCTTTCTCAATGGAAATATTAACTTAAGTCCCAACTGTTGTCGGTCGATCGAAATCATCCAACATAATTGTTGGCCAACATTACTCGGCTCGTTGGGATATACAGTAGAAGAAGCTAACATTCTAGAGGTCTATTGTGATACTAAAGGAAGCAAGCCTCCGACACCGCCATCATCTCCACTTGCACCATCCATTGAGCCTGAAGGTCTTGCTCCTTGA MAYLSKLLILTSLLVFAFSFMVESRPNPKVSLATRLNLERNASDCWGSLFRLEACSSEIITFFLNGNINLSPNCCRSIEIIQHNCWPTLLGSLGYTVEEANILEVYCDTKGSKPPTPPSSPLAPSIEPEGLAP Homology
BLAST of CaUC08G146480 vs. NCBI nr
Match: KGN46138.1 (hypothetical protein Csa_005151 [Cucumis sativus]) HSP 1 Score: 223.0 bits (567), Expect = 1.5e-54 Identity = 106/133 (79.70%), Postives = 118/133 (88.72%), Query Frame = 0
BLAST of CaUC08G146480 vs. NCBI nr
Match: XP_023551508.1 (egg cell-secreted protein 1.1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 197.6 bits (501), Expect = 6.8e-47 Identity = 92/113 (81.42%), Postives = 99/113 (87.61%), Query Frame = 0
BLAST of CaUC08G146480 vs. NCBI nr
Match: KAA0054959.1 (egg cell-secreted protein 1.2-like [Cucumis melo var. makuwa] >TYK22748.1 egg cell-secreted protein 1.2-like [Cucumis melo var. makuwa]) HSP 1 Score: 195.3 bits (495), Expect = 3.4e-46 Identity = 91/113 (80.53%), Postives = 100/113 (88.50%), Query Frame = 0
BLAST of CaUC08G146480 vs. NCBI nr
Match: KAG6578886.1 (Egg cell-secreted protein 1.1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 184.9 bits (468), Expect = 4.6e-43 Identity = 88/114 (77.19%), Postives = 96/114 (84.21%), Query Frame = 0
BLAST of CaUC08G146480 vs. NCBI nr
Match: XP_023524587.1 (egg cell-secreted protein 1.1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 154.8 bits (390), Expect = 5.1e-34 Identity = 79/140 (56.43%), Postives = 95/140 (67.86%), Query Frame = 0
BLAST of CaUC08G146480 vs. ExPASy Swiss-Prot
Match: Q9SRD8 (Egg cell-secreted protein 1.1 OS=Arabidopsis thaliana OX=3702 GN=EC1.1 PE=2 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 3.7e-19 Identity = 47/120 (39.17%), Postives = 70/120 (58.33%), Query Frame = 0
BLAST of CaUC08G146480 vs. ExPASy Swiss-Prot
Match: Q9T039 (Egg cell-secreted protein 1.4 OS=Arabidopsis thaliana OX=3702 GN=EC1.4 PE=2 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 2.4e-18 Identity = 46/118 (38.98%), Postives = 67/118 (56.78%), Query Frame = 0
BLAST of CaUC08G146480 vs. ExPASy Swiss-Prot
Match: Q9SJ24 (Egg cell-secreted protein 1.2 OS=Arabidopsis thaliana OX=3702 GN=EC1.2 PE=2 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 5.9e-17 Identity = 42/112 (37.50%), Postives = 64/112 (57.14%), Query Frame = 0
BLAST of CaUC08G146480 vs. ExPASy Swiss-Prot
Match: Q9SJ23 (Egg cell-secreted protein 1.3 OS=Arabidopsis thaliana OX=3702 GN=EC1.3 PE=2 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 7.6e-17 Identity = 44/125 (35.20%), Postives = 71/125 (56.80%), Query Frame = 0
BLAST of CaUC08G146480 vs. ExPASy TrEMBL
Match: A0A0A0K9I7 (Prolamin_like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G056550 PE=4 SV=1) HSP 1 Score: 223.0 bits (567), Expect = 7.3e-55 Identity = 106/133 (79.70%), Postives = 118/133 (88.72%), Query Frame = 0
BLAST of CaUC08G146480 vs. ExPASy TrEMBL
Match: A0A5A7UNB2 (Egg cell-secreted protein 1.2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G00780 PE=4 SV=1) HSP 1 Score: 195.3 bits (495), Expect = 1.6e-46 Identity = 91/113 (80.53%), Postives = 100/113 (88.50%), Query Frame = 0
BLAST of CaUC08G146480 vs. ExPASy TrEMBL
Match: A0A6J1KEX2 (egg cell-secreted protein 1.1-like OS=Cucurbita maxima OX=3661 GN=LOC111493240 PE=4 SV=1) HSP 1 Score: 153.7 bits (387), Expect = 5.5e-34 Identity = 78/140 (55.71%), Postives = 96/140 (68.57%), Query Frame = 0
BLAST of CaUC08G146480 vs. ExPASy TrEMBL
Match: A0A6J1KD37 (egg cell-secreted protein 1.1-like OS=Cucurbita maxima OX=3661 GN=LOC111493241 PE=4 SV=1) HSP 1 Score: 149.1 bits (375), Expect = 1.3e-32 Identity = 77/140 (55.00%), Postives = 92/140 (65.71%), Query Frame = 0
BLAST of CaUC08G146480 vs. ExPASy TrEMBL
Match: A0A1S3CM80 (egg cell-secreted protein 1.2-like OS=Cucumis melo OX=3656 GN=LOC103502392 PE=4 SV=1) HSP 1 Score: 147.5 bits (371), Expect = 3.9e-32 Identity = 77/138 (55.80%), Postives = 90/138 (65.22%), Query Frame = 0
BLAST of CaUC08G146480 vs. TAIR 10
Match: AT1G76750.1 (Protein of unknown function (DUF1278) ) HSP 1 Score: 95.9 bits (237), Expect = 2.6e-20 Identity = 47/120 (39.17%), Postives = 70/120 (58.33%), Query Frame = 0
BLAST of CaUC08G146480 vs. TAIR 10
Match: AT4G39340.1 (Protein of unknown function (DUF1278) ) HSP 1 Score: 93.2 bits (230), Expect = 1.7e-19 Identity = 46/118 (38.98%), Postives = 67/118 (56.78%), Query Frame = 0
BLAST of CaUC08G146480 vs. TAIR 10
Match: AT2G21740.1 (Protein of unknown function (DUF1278) ) HSP 1 Score: 88.6 bits (218), Expect = 4.2e-18 Identity = 42/112 (37.50%), Postives = 64/112 (57.14%), Query Frame = 0
BLAST of CaUC08G146480 vs. TAIR 10
Match: AT2G21750.1 (Protein of unknown function (DUF1278) ) HSP 1 Score: 88.2 bits (217), Expect = 5.4e-18 Identity = 44/125 (35.20%), Postives = 71/125 (56.80%), Query Frame = 0
BLAST of CaUC08G146480 vs. TAIR 10
Match: AT5G52975.1 (Protein of unknown function (DUF1278) ) HSP 1 Score: 44.3 bits (103), Expect = 9.0e-05 Identity = 17/44 (38.64%), Postives = 23/44 (52.27%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|