CaUC08G143950 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC08G143950
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	transcription factor IBH1
Location	Ciama_Chr08: 10318762 .. 10324039 (+)
RNA-Seq Expression	CaUC08G143950
Synteny	CaUC08G143950

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCTAAATCAGGTATAACCCTAATGAATTCAACCTCGTCCCGCCTCCGTCTCGCTCGAACCTTCCTCCGATCCTTCTCCAAAATCAAATCCCAAACCTCATCTCCACACCTCAAACGCCAGAGCCGACGGATAAAGATGGCTGCATACTCCTCCATGGCTCGCGTCGCCGGCCCAAGGAGAGCTTGGGCTAGAGCCCTGCTCTTCAACCTCCACACGCGACCTACACACAGGACTCTAATGAATACACCCCCTGGTGCCTCCACGACCACACCACCCTCCTCTCGCTCCGACAACCAAGTCGGGAAGCTCCGCCGCCTGCTCCCCGGTGGCGATAGGATGGACGTTTGCACCTTGCTGGAGGAAACTGCTAATTACATCCATTGCTTGTCCACACAAGTTAAGGTGATGAAAGCCATATCTGATCATCACTTTTGATCCACACTTCCATCTTCTTCCTCAAATATATCCTCATTAACAGAGATCATATCCAAATACAAACCATAGATTATACACAACAACAGACACCCAAACTAGAAAGAGAGATTTCATATGATAATATAGTAGCCTTATTTATTATTATTTTTTTTTTCATGCATATAAAAACCAAGTTACACAGAGATTTTAGAACAATATATACATCTATATAATATTTGTCCATGCATTTTGGGTGGTAATTCTTGCAAAATCCATTGTTCTTATATTCTGATTTTTTTTCTTTTTCTTTTTTTCTTTTTAAATTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATATATTTTATGATAGAGAAAAATCTGAAATACCCTTTTCCTCTCTCTCTAATTTTGTCTCTCTTGATATTGTCTGTAAGCTTTGGAAATCTCTGGAGAAGAAGGAAAACCTTGAGTTTATGTATGAATGTTTTAGACTTTCTGTTTTTATGATTGCATTTGTTTTGTTTTGTTTTGTAGAAAAGTTTGTTTGTGCTGAATATATGGTTTTCTGGGAAGGTGGTAAGCTTGTTTAATTAAGAGATTATAAGATTCTATTTTCTCAAATGAAACTTTTCTCCTTCTTATTTTAAGAGATTTTGAACTTTGCATATATATATAGATCCATTCAATCTTGAAGAATTAAATATAAAGTTGTGTGCAACTTGGTCTCTCTCTTTCTTTCTCAAGAACATGGTCAATTCATTGTAGGTTCATCTTGATCCCCTCTCTTTTGTTAAAAACATGTTTGGATTGCCTAAAAAAAAAAGAGTTTGGATAACTGTTTGTTTGTTTGTTTTTTTTTATTATTATTTTTTTTTTTGGTTTAATATAATGTTGTGTAGAAATATGTTAGAATAATTTTTAGAGTATTGGATGTTCTATGTTTTAATAAATATGAAATTTCTATATCGGTAATTTTTTAATTGAATTTTTGTTTTGGTATTGAAACGTTTTTTTTAAAACCTTCTTTATGCTTTTTAGAATGGATGTTGAATAAAACACGTTTAATAATTGTTATTTAGCTTAAATTTTAAAAAAGAGAAAACCTTCTGAGCTTTATCATTTGTGTTAAAAATACATGTATTATTTCTTGGAAAGTTGCCACGCTATTAACATTCAATTTTCATAAATATTTCAAAACTACTATTGGAGTAAAAATTCATTAGAATTTTGATTAGAAATTGGGGCCTAAACTTGATTGGCGATGTTTTGATTCCAATTTTTTTTCATGTTATTGCTACATTTTTTGACCTAATTTTCGTCCAACGTTATATTTTGATGGAATTTTTTCTTTTGAAACATCTATGAAAGATCAAGAATAATATTGTAATTGATATTTTTAAAAGAAAGGAACAAGTTAAAGGGTACTAATCATTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTGTAATTTAGCATTTTTAAGGGCTTTTTTCAAATATATCAAAATGAATCAACTTATTTATAAATATAACAAAATATCACTGTTTACTAGTGATAGCACCGATAAATATCTATCATTGTCTATCTTGGTCTATCACTGATAGATAGTAATATTTTGCTATATTTGAAAATATTTTTAGTAGTTTTACCATTTAAAACATTACTTTTTTTTTTTAATTGTGTTCTTTTGTATGATGATCTTTTATTATTATTATTATTAATAATAATAATATGTCATTGTTCATCTCTTAAAATGATGAAGTTGCATGTAATGATTCCATCCCTTCGTAATATATCGATATGTTGGAAATAATATGGAAACTTATTTCTTTTAACAATATGTGGGGTGAAAAAATCGAATCTTTAACTTCGAGATTGATAATAAAAATTTATGTCAGTTCAACTATGACCATGCATGCAGGCAAAATAAAAAACCATCTTAACTTCTTTTTCATTATTTCTACTTTCAACATTTTTTAAATCTTTTTAATTTGAATCTAGATTTCAATTGCAAAACCCTTAATAATAATAGTTCTATCTCTAGATACACTCATATACACTTATATGGATATGTTATTATATAGATATATGTGTACCTACACATAGGTCAAGAGTGATTGATATGCATTCTCTTTCGGAGGTGTGAATCGAATCTCTGATTTTAAGGAATGCATTCTCTTTTGGAAGTGTGAATCGAATCTCCGACTTTAAAGAAGAGATAACATATCAATTATTATTGAGTTTAGTTAACTTTAACAAATTTTCTGAAATTAAACCATTAAAAGTACTCTTTTAAAATTTAACCAAACAATACTTTATTAAAAGAAAAAACACATTTATAGATTTTCTTAAACACTTTAAAATGCATGCAAAACAGGCAGGTAGTTGGTCTATTTCTATAAGTAACCTAGGTTGTTTGATAATTCATTTAGTTTTTTATTTTCAAAAATTGTATTTATTTTCTTACTAAATACGTCTCTATACTTTAAGTAATTCTTAATTAAATTAAAACAAAACAAAAAATTTTAAATCTATTTTCTTTTAATTTGCAAAACTTGACATGAAATTTGAGAACACTATCTTTGGAGAGAAGACAAAGAAACAAACAAACCCATAAATGAAGTATTAATTATAAGCTAAAATTTTAAAAACAAAAAATAAAAAACCATGATTATGAACCTAATAACAAAGGTTTTGTATTATTTTAAAGGTTCTAAAAGATATTTTCAAAACCTCCAAATAAAGAAAAAAAAGAACACTTTTTTTTTCTCTCTCATAGATAGAATTATGCTACTGCTAGCTAGGGTTTTGATATAAAACCACAATCATTATTAATAACAATAATATTGCACTTTAGTTCTTATATTATAAAAATTTTCTTCTTTTTAAATTGAATCTATATCTTTTGTAAATATATACATTTATTTTATTATAATAGGTGGAGAAATTCGAACCACGTAACTCTTAATTGCTAACACATTGATAAGTCAGTTGAACCATAATTAAGTTAATCTAACCTACAAACCTACGATATAGAAAATAATTCATATATTCACAATATTTTTAGTATGTGTGCGAAGAATATACTTAATATCCATAAATTAATGTCATAATCAACTGTTTATTAACATATATCAATCTAATCTGTCTCTGATTAAAGTAGCCGCGGTAATTTTGATCTCATTGTTTTCATATAATTTTGAATGAAAACAAAAATTTAACAAAAAAAAGAAGCTCAATAAATCATTAAAACGTCATTTCATTTTATTCTTACACTTTAAAAAAAGATGTTTCAAAAATAGAAAAATTGTTGAAAATAATTACAAATATAGCAAAAAATTTATTACTCAAATAGACATTTATTTATCTCTATCGCTAAAGTGATAGATGTCTATCTGGGTATATCACAATAGAAAATAAAAATTTACTATATTTATAAATAATTTGATATTTTTTTTCTATTTATAATAATTTTTTCTAAAATAAAAAAAAAACATTCTTAAGGTGTGTAATATGATTAAAAGAACACTTCATGAAATTATTACAAAAAGAAAAAACAAACTTGAATTAAAGATCCACCCACCAATAACATATATAAAATATATATGTCATGATATATGTTTCTTGTCACTATAATCAGGCTTTAATTTTGTAATAATTACAAATTTAGTTCATGAATTTTTAAATATATTTTTAATAAGCCAAAACAAGTTTAGCTATACAGTAATTGATATAACCTTCTATCTTAAAGGTGGGAGGTCCAATCCCCATTCCCACAATTGTTGTACTAAAAAAATGTGTCCAATAGATTCATGAGTATTAAAAAATGTCAAATAAGTAAACAAAACCCATTAGACATATTTCTATTTGTGACATCCCAAATTTTCAGGTAATTTTAAATTAATTATCTTAAATTATTTGGTTAGTTTTTTGAATTTTGAAGCATAATTGGATTATATTGAGAAAATAATTCAATTTAAAGTGAACCAAATAAAAGGGTTGTATTCAATTAGATTAGTGGAAAATTGAATTCATCTGGGAAGATTTAAAAGTTGAATTTAATTTGAAAATTTGGCTTTGGGTGAGATTTAATGATTTGGTTAATTTAAGTGAAAATGTGGATAAATTATTATGGAATTGAATTTAAGTGGGAAGAGATTTGATCTTACGGGTTGAAAAATATATTAAATAAGTTGTATTTGTAGAGGGAAAAGAAAAGAAAAAAAGAAAAAAAGAAAAAAAAAAAATATATATATATATATATATATATATATATATATATATATATATATATATTCAGCCTTCCTCTCCAACCCCTCGACGGTCAAACTCTATCTCTCTGCCCCGATCGGAAAGTTCTCTGCCGCTAGCCATCCGTCGCGCCTCACGCCGCAGCCGCACGAACCGCCATCGGGACTCATCGCCGACAATCGCGTTGCTGGATCTCGTCGCCCCAGCCGGTCCCTATCCATCAGATGCATCGGTTGCCGACCGTCCGCGTGCCGTCGACTGGTCGTCGGTCGTCCAAAGCCTCGCACCGCTGTTTGATTGA

mRNA sequence

ATGGCTTCTAAATCAGGTATAACCCTAATGAATTCAACCTCGTCCCGCCTCCGTCTCGCTCGAACCTTCCTCCGATCCTTCTCCAAAATCAAATCCCAAACCTCATCTCCACACCTCAAACGCCAGAGCCGACGGATAAAGATGGCTGCATACTCCTCCATGGCTCGCGTCGCCGGCCCAAGGAGAGCTTGGGCTAGAGCCCTGCTCTTCAACCTCCACACGCGACCTACACACAGGACTCTAATGAATACACCCCCTGGTGCCTCCACGACCACACCACCCTCCTCTCGCTCCGACAACCAAGTCGGGAAGCTCCGCCGCCTGCTCCCCGGTGGCGATAGGATGGACGTTTGCACCTTGCTGGAGGAAACTGCTAATTACATCCATTGCTTGTCCACACAAGTTAAGCCTTCCTCTCCAACCCCTCGACGGTCAAACTCTATCTCTCTGCCCCGATCGGAAAGTTCTCTGCCGCTAGCCATCCGTCGCGCCTCACGCCGCAGCCGCACGAACCGCCATCGGGACTCATCGCCGACAATCGCGTTGCTGGATCTCGTCGCCCCAGCCGGTCCCTATCCATCAGATGCATCGGTTGCCGACCGTCCGCGTGCCGTCGACTGGTCGTCGGTCGTCCAAAGCCTCGCACCGCTGTTTGATTGA

Coding sequence (CDS)

ATGGCTTCTAAATCAGGTATAACCCTAATGAATTCAACCTCGTCCCGCCTCCGTCTCGCTCGAACCTTCCTCCGATCCTTCTCCAAAATCAAATCCCAAACCTCATCTCCACACCTCAAACGCCAGAGCCGACGGATAAAGATGGCTGCATACTCCTCCATGGCTCGCGTCGCCGGCCCAAGGAGAGCTTGGGCTAGAGCCCTGCTCTTCAACCTCCACACGCGACCTACACACAGGACTCTAATGAATACACCCCCTGGTGCCTCCACGACCACACCACCCTCCTCTCGCTCCGACAACCAAGTCGGGAAGCTCCGCCGCCTGCTCCCCGGTGGCGATAGGATGGACGTTTGCACCTTGCTGGAGGAAACTGCTAATTACATCCATTGCTTGTCCACACAAGTTAAGCCTTCCTCTCCAACCCCTCGACGGTCAAACTCTATCTCTCTGCCCCGATCGGAAAGTTCTCTGCCGCTAGCCATCCGTCGCGCCTCACGCCGCAGCCGCACGAACCGCCATCGGGACTCATCGCCGACAATCGCGTTGCTGGATCTCGTCGCCCCAGCCGGTCCCTATCCATCAGATGCATCGGTTGCCGACCGTCCGCGTGCCGTCGACTGGTCGTCGGTCGTCCAAAGCCTCGCACCGCTGTTTGATTGA

Protein sequence

MASKSGITLMNSTSSRLRLARTFLRSFSKIKSQTSSPHLKRQSRRIKMAAYSSMARVAGPRRAWARALLFNLHTRPTHRTLMNTPPGASTTTPPSSRSDNQVGKLRRLLPGGDRMDVCTLLEETANYIHCLSTQVKPSSPTPRRSNSISLPRSESSLPLAIRRASRRSRTNRHRDSSPTIALLDLVAPAGPYPSDASVADRPRAVDWSSVVQSLAPLFD

Homology

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BLAST of CaUC08G143950 vs. NCBI nr
Match: XP_008464343.1 (PREDICTED: transcription factor IBH1 [Cucumis melo] >KAA0031737.1 transcription factor IBH1 [Cucumis melo var. makuwa] >TYK01643.1 transcription factor IBH1 [Cucumis melo var. makuwa])

HSP 1 Score: 178.3 bits (451), Expect = 7.1e-41
Identity = 102/141 (72.34%), Postives = 109/141 (77.30%), Query Frame = 0


Query: 3   SKSGITLMNSTSSRLRLARTFLRSFSKIKSQTSS-------PHLKRQSRRIKMAAYSSMA 62
           SKS ITL+NSTSSR R ARTFLR FS+IKSQ S+         LKRQS+RIKM AYSSMA
Sbjct: 4   SKSAITLLNSTSSRFRFARTFLRLFSRIKSQRSATFASAPPDQLKRQSQRIKMVAYSSMA 63

Query: 63  RVAGPRRAWARALLFNLHTRPTHRTLMNTPPGASTTTPPSSRSDNQVGKLRRLLPGGDRM 122
           RVAGPRRAWARALLF L TRP HRTLM           PS+  D+QVGKLRRLLPGG+ M
Sbjct: 64  RVAGPRRAWARALLFKLQTRPRHRTLMR------RKRRPSTSPDDQVGKLRRLLPGGETM 123

Query: 123 DVCTLLEETANYIHCLSTQVK 137
           DVCTLLEETANYIHCLSTQVK
Sbjct: 124 DVCTLLEETANYIHCLSTQVK 138

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BLAST of CaUC08G143950 vs. NCBI nr
Match: KAG7025295.1 (Transcription factor IBH1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 167.9 bits (424), Expect = 9.5e-38
Identity = 98/143 (68.53%), Postives = 112/143 (78.32%), Query Frame = 0


Query: 1   MASKSGITLMNSTSSRLRLARTFLRSFSKIKSQ-------TSSPHLKRQSRRIKMAAYSS 60
           MAS+SG T MNS+SS LRLARTFLRSFS+IKS+        S+  L+R+SRRIK+AAYSS
Sbjct: 1   MASESGTTPMNSSSSSLRLARTFLRSFSRIKSRRPTTAASRSAFELRRRSRRIKIAAYSS 60

Query: 61  MARVAGPRRAWARALLFNLHTRPTHRTLMNTPPGASTTTPPSSRSDNQVGKLRRLLPGGD 120
           MARVAGP+RAWARALLF L+TR  H TLM        +T PS+  D+ VGKLRRLLPGGD
Sbjct: 61  MARVAGPQRAWARALLFKLNTRARHGTLMR----RRRSTMPSAYPDDHVGKLRRLLPGGD 120

Query: 121 RMDVCTLLEETANYIHCLSTQVK 137
            MDVCTLLEETA+YIHCLS QVK
Sbjct: 121 GMDVCTLLEETADYIHCLSAQVK 139

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BLAST of CaUC08G143950 vs. NCBI nr
Match: XP_023005092.1 (transcription factor IBH1 [Cucurbita maxima])

HSP 1 Score: 165.2 bits (417), Expect = 6.2e-37
Identity = 96/143 (67.13%), Postives = 111/143 (77.62%), Query Frame = 0


Query: 1   MASKSGITLMNSTSSRLRLARTFLRSFSKIKSQ-------TSSPHLKRQSRRIKMAAYSS 60
           MA +SGIT MNS+SS LRLARTFLRSFS+IKS+        S+  L+R+SRRIK+AAYSS
Sbjct: 1   MAYESGITPMNSSSSSLRLARTFLRSFSRIKSRRPTTAASRSAFELRRRSRRIKIAAYSS 60

Query: 61  MARVAGPRRAWARALLFNLHTRPTHRTLMNTPPGASTTTPPSSRSDNQVGKLRRLLPGGD 120
           MARVAGP+R WARALLF L+TR  HRT M        +T PS+  D+ VGKLRRL+PGGD
Sbjct: 61  MARVAGPQRTWARALLFKLNTRARHRTSMR----RRCSTMPSAYPDDHVGKLRRLVPGGD 120

Query: 121 RMDVCTLLEETANYIHCLSTQVK 137
            MDVCTLLEETA+YIHCLS QVK
Sbjct: 121 GMDVCTLLEETADYIHCLSAQVK 139

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BLAST of CaUC08G143950 vs. NCBI nr
Match: KAG6575326.1 (Transcription factor IBH1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013866.1 Transcription factor IBH1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 157.9 bits (398), Expect = 9.9e-35
Identity = 94/141 (66.67%), Postives = 103/141 (73.05%), Query Frame = 0


Query: 1   MASKSGITLMNSTSSRLRLARTFLRSFSKIKSQ-----TSSPHLKRQSRRIKMAAYSSMA 60
           MASKSG T + STSS LRLARTFLRSF+ IKSQ      S P L+R+SRRIKM AYSSMA
Sbjct: 1   MASKSGRTPIRSTSSTLRLARTFLRSFANIKSQEPAILPSPPELRRRSRRIKMMAYSSMA 60

Query: 61  RVAGPRRAWARALLFNLHTRPTHRTLMNTPPGASTTTPPSSRSDNQVGKLRRLLPGGDRM 120
           R AGPR AWARALLF L TR  HRTL+       T      RSD++VGKLRRL+PGG+ M
Sbjct: 61  RTAGPRCAWARALLFKLRTRARHRTLI-------TRRRHHHRSDDRVGKLRRLVPGGESM 120

Query: 121 DVCTLLEETANYIHCLSTQVK 137
           DVCTLLEET  YI CLS QVK
Sbjct: 121 DVCTLLEETGEYIQCLSAQVK 134

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BLAST of CaUC08G143950 vs. NCBI nr
Match: XP_023548405.1 (transcription factor IBH1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 156.0 bits (393), Expect = 3.7e-34
Identity = 93/141 (65.96%), Postives = 102/141 (72.34%), Query Frame = 0


Query: 1   MASKSGITLMNSTSSRLRLARTFLRSFSKIKSQ-----TSSPHLKRQSRRIKMAAYSSMA 60
           MASKSG T + STS+ LRLARTFLRSF+ IKSQ      S P LKRQSRRIKM AYSSMA
Sbjct: 1   MASKSGRTPIRSTSTALRLARTFLRSFANIKSQEPAILPSPPELKRQSRRIKMVAYSSMA 60

Query: 61  RVAGPRRAWARALLFNLHTRPTHRTLMNTPPGASTTTPPSSRSDNQVGKLRRLLPGGDRM 120
           R AGPR AWARALLF L  R  HRTL+       T       SD++VGKLRRL+PGG+RM
Sbjct: 61  RAAGPRCAWARALLFKLRMRARHRTLI-------TRRRYHHHSDDRVGKLRRLVPGGERM 120

Query: 121 DVCTLLEETANYIHCLSTQVK 137
           DVC+LLEET  YI CL TQVK
Sbjct: 121 DVCSLLEETGEYIQCLRTQVK 134

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BLAST of CaUC08G143950 vs. ExPASy Swiss-Prot
Match: Q7XR02 (Transcription factor IBH1 OS=Oryza sativa subsp. japonica OX=39947 GN=IBH1 PE=1 SV=2)

HSP 1 Score: 67.8 bits (164), Expect = 1.8e-10
Identity = 56/158 (35.44%), Postives = 78/158 (49.37%), Query Frame = 0


Query: 12  STSSRLRLARTFLRSFSKIKSQTSSPHLKRQSRRIKMAAYSSMARVAGPRRAWARALLFN 71
           + +++  LA  FLR+ S+I   T    + R++R I+ AAYSSMAR A PRRAW+RALL  
Sbjct: 37  AAATKHMLAFHFLRALSRIHRATP---VTRRTRTIRRAAYSSMARAASPRRAWSRALLGQ 96

Query: 72  LHTRPTHRTLM------------------------------NTPPGASTTTPPSSRSDNQ 131
           +  R + RTLM                                   A+   PP  R   +
Sbjct: 97  VRARRS-RTLMRRAAVLVRRRVVAAPAPSPASARGVRIIAAGETSAAARAVPPPPRQQGE 156

Query: 132 VGK---LRRLLPGGDRMDVCTLLEETANYIHCLSTQVK 137
             +   LRRL+PGG  M+  +LLEETA+Y+  L  QV+
Sbjct: 157 PPRAEALRRLVPGGAGMEYSSLLEETADYLRSLRAQVQ 190

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BLAST of CaUC08G143950 vs. ExPASy Swiss-Prot
Match: Q01I07 (Transcription factor IBH1 OS=Oryza sativa subsp. indica OX=39946 GN=IBH1 PE=3 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 3.0e-10
Identity = 56/158 (35.44%), Postives = 76/158 (48.10%), Query Frame = 0


Query: 12  STSSRLRLARTFLRSFSKIKSQTSSPHLKRQSRRIKMAAYSSMARVAGPRRAWARALLFN 71
           + +++  LA  FLR+ S+I   T    + R++R I+ AAYSSMAR A PRRAW+RALL  
Sbjct: 37  AAATKHMLAFHFLRALSRIHRATP---VTRRTRTIRRAAYSSMARAASPRRAWSRALLGQ 96

Query: 72  LHTRPTHRTLM------------------------------NTPPGASTTTPPSSRSDNQ 131
              R + RTLM                                   A+   PP  R   +
Sbjct: 97  ARARRS-RTLMRRAAVLVRRRVVAAPAPSPASARGVRIIAAGETSAAARAVPPPPRQQGE 156

Query: 132 ---VGKLRRLLPGGDRMDVCTLLEETANYIHCLSTQVK 137
                 LRRL+PGG  M+  +LLEETA+Y+  L  QV+
Sbjct: 157 PPRADALRRLVPGGAGMEYSSLLEETADYLRSLRAQVQ 190

[Close]

BLAST of CaUC08G143950 vs. ExPASy Swiss-Prot
Match: Q9SKX1 (Transcription factor IBH1 OS=Arabidopsis thaliana OX=3702 GN=IBH1 PE=1 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 5.3e-07
Identity = 50/125 (40.00%), Postives = 67/125 (53.60%), Query Frame = 0


Query: 23  FLRSFSKIKSQT--SSPHLKR-QSRRIKMAAYSSMARVA-GPRRAWARALL------FNL 82
           FL+S S ++ Q    +P  K  + R+IK AAY SMAR A G  R W+RALL       N 
Sbjct: 22  FLQSLSNLRKQNPFDTPDQKNYRVRKIKKAAYVSMARAAGGSSRLWSRALLRRADKDDNK 81

Query: 83  HTRPTHRT-LMNTPPGASTTTPPSSRSDNQVGKLRRLLPGGDRMDVCTLLEETANYIHCL 137
             R + R   +++    S    P    +    +LR L+PGG  M+   L+EETA+YI CL
Sbjct: 82  IVRFSRRKWKISSKRRRSNQRAPV--VEEAAERLRNLVPGGGGMETSKLMEETAHYIKCL 141

[Close]

BLAST of CaUC08G143950 vs. ExPASy TrEMBL
Match: A0A5D3BPL2 (Transcription factor IBH1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold128G00050 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 3.4e-41
Identity = 102/141 (72.34%), Postives = 109/141 (77.30%), Query Frame = 0


Query: 3   SKSGITLMNSTSSRLRLARTFLRSFSKIKSQTSS-------PHLKRQSRRIKMAAYSSMA 62
           SKS ITL+NSTSSR R ARTFLR FS+IKSQ S+         LKRQS+RIKM AYSSMA
Sbjct: 4   SKSAITLLNSTSSRFRFARTFLRLFSRIKSQRSATFASAPPDQLKRQSQRIKMVAYSSMA 63

Query: 63  RVAGPRRAWARALLFNLHTRPTHRTLMNTPPGASTTTPPSSRSDNQVGKLRRLLPGGDRM 122
           RVAGPRRAWARALLF L TRP HRTLM           PS+  D+QVGKLRRLLPGG+ M
Sbjct: 64  RVAGPRRAWARALLFKLQTRPRHRTLMR------RKRRPSTSPDDQVGKLRRLLPGGETM 123

Query: 123 DVCTLLEETANYIHCLSTQVK 137
           DVCTLLEETANYIHCLSTQVK
Sbjct: 124 DVCTLLEETANYIHCLSTQVK 138

[Close]

BLAST of CaUC08G143950 vs. ExPASy TrEMBL
Match: A0A1S3CLD3 (transcription factor IBH1 OS=Cucumis melo OX=3656 GN=LOC103502249 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 3.4e-41
Identity = 102/141 (72.34%), Postives = 109/141 (77.30%), Query Frame = 0


Query: 3   SKSGITLMNSTSSRLRLARTFLRSFSKIKSQTSS-------PHLKRQSRRIKMAAYSSMA 62
           SKS ITL+NSTSSR R ARTFLR FS+IKSQ S+         LKRQS+RIKM AYSSMA
Sbjct: 4   SKSAITLLNSTSSRFRFARTFLRLFSRIKSQRSATFASAPPDQLKRQSQRIKMVAYSSMA 63

Query: 63  RVAGPRRAWARALLFNLHTRPTHRTLMNTPPGASTTTPPSSRSDNQVGKLRRLLPGGDRM 122
           RVAGPRRAWARALLF L TRP HRTLM           PS+  D+QVGKLRRLLPGG+ M
Sbjct: 64  RVAGPRRAWARALLFKLQTRPRHRTLMR------RKRRPSTSPDDQVGKLRRLLPGGETM 123

Query: 123 DVCTLLEETANYIHCLSTQVK 137
           DVCTLLEETANYIHCLSTQVK
Sbjct: 124 DVCTLLEETANYIHCLSTQVK 138

[Close]

BLAST of CaUC08G143950 vs. ExPASy TrEMBL
Match: A0A6J1KS83 (transcription factor IBH1 OS=Cucurbita maxima OX=3661 GN=LOC111498183 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 3.0e-37
Identity = 96/143 (67.13%), Postives = 111/143 (77.62%), Query Frame = 0


Query: 1   MASKSGITLMNSTSSRLRLARTFLRSFSKIKSQ-------TSSPHLKRQSRRIKMAAYSS 60
           MA +SGIT MNS+SS LRLARTFLRSFS+IKS+        S+  L+R+SRRIK+AAYSS
Sbjct: 1   MAYESGITPMNSSSSSLRLARTFLRSFSRIKSRRPTTAASRSAFELRRRSRRIKIAAYSS 60

Query: 61  MARVAGPRRAWARALLFNLHTRPTHRTLMNTPPGASTTTPPSSRSDNQVGKLRRLLPGGD 120
           MARVAGP+R WARALLF L+TR  HRT M        +T PS+  D+ VGKLRRL+PGGD
Sbjct: 61  MARVAGPQRTWARALLFKLNTRARHRTSMR----RRCSTMPSAYPDDHVGKLRRLVPGGD 120

Query: 121 RMDVCTLLEETANYIHCLSTQVK 137
            MDVCTLLEETA+YIHCLS QVK
Sbjct: 121 GMDVCTLLEETADYIHCLSAQVK 139

[Close]

BLAST of CaUC08G143950 vs. ExPASy TrEMBL
Match: A0A0A0KDQ3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G020740 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 7.4e-36
Identity = 94/134 (70.15%), Postives = 100/134 (74.63%), Query Frame = 0


Query: 3   SKSGITLMNSTSSRLRLARTFLRSFSKIKSQTSSPHLKRQSRRIKMAAYSSMARVAGPRR 62
           SKS ITL+NSTSSRL  ART     S   +      LKRQSRRIKMAAYSSMARVAG RR
Sbjct: 4   SKSAITLLNSTSSRLCFART-----SATFASAPPDQLKRQSRRIKMAAYSSMARVAGRRR 63

Query: 63  AWARALLFNLHTRPTHRTLMNTPPGASTTTPPSSRSDNQVGKLRRLLPGGDRMDVCTLLE 122
           AWARALLF LHTRP H+TLM           PS+ SD+ VGKLRRLLPGG+ MDVCTLLE
Sbjct: 64  AWARALLFRLHTRPRHKTLMR------RKRRPSTSSDDMVGKLRRLLPGGETMDVCTLLE 123

Query: 123 ETANYIHCLSTQVK 137
           ETANYIHCLSTQVK
Sbjct: 124 ETANYIHCLSTQVK 126

[Close]

BLAST of CaUC08G143950 vs. ExPASy TrEMBL
Match: A0A2N9I4P0 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS46872 PE=4 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 1.8e-21
Identity = 68/150 (45.33%), Postives = 92/150 (61.33%), Query Frame = 0


Query: 6   GITLMNSTSSRLRLARTFLRSFSKIK----SQTSSPHLKRQSRRIKMAAYSSMARVAGPR 65
           G+TL N+ S R++ AR F+R+ SK+K    S +S   ++++S+RIK+AAYSSMA   G +
Sbjct: 5   GVTL-NTNSRRIKFARRFIRTLSKMKKTAPSSSSIDEVRKRSQRIKIAAYSSMAHAVGSK 64

Query: 66  RAWARALLFNLHTRPTH---------------RTLMNTPPGASTTTPPSSRSDNQVGKLR 125
           +AW+RA+LF L  R  H               R + N PPG            NQ  KLR
Sbjct: 65  KAWSRAILFKLRNRARHQGMMMRRRSIGFKKKRAIKNDPPG----------EQNQTKKLR 124

Query: 126 RLLPGGDRMDVCTLLEETANYIHCLSTQVK 137
           +L+PGG  MD+C+LLEETA+YI CLSTQVK
Sbjct: 125 QLVPGGKAMDMCSLLEETAHYIRCLSTQVK 143

[Close]

BLAST of CaUC08G143950 vs. TAIR 10
Match: AT2G43060.1 (ILI1 binding bHLH 1 )

HSP 1 Score: 56.2 bits (134), Expect = 3.8e-08
Identity = 50/125 (40.00%), Postives = 67/125 (53.60%), Query Frame = 0


Query: 23  FLRSFSKIKSQT--SSPHLKR-QSRRIKMAAYSSMARVA-GPRRAWARALL------FNL 82
           FL+S S ++ Q    +P  K  + R+IK AAY SMAR A G  R W+RALL       N 
Sbjct: 22  FLQSLSNLRKQNPFDTPDQKNYRVRKIKKAAYVSMARAAGGSSRLWSRALLRRADKDDNK 81

Query: 83  HTRPTHRT-LMNTPPGASTTTPPSSRSDNQVGKLRRLLPGGDRMDVCTLLEETANYIHCL 137
             R + R   +++    S    P    +    +LR L+PGG  M+   L+EETA+YI CL
Sbjct: 82  IVRFSRRKWKISSKRRRSNQRAPV--VEEAAERLRNLVPGGGGMETSKLMEETAHYIKCL 141

[Close]

BLAST of CaUC08G143950 vs. TAIR 10
Match: AT4G30180.1 (sequence-specific DNA binding transcription factors;transcription regulators )

HSP 1 Score: 42.0 bits (97), Expect = 7.4e-04
Identity = 29/81 (35.80%), Postives = 40/81 (49.38%), Query Frame = 0


Query: 63  AWARALLFNL--HTRPTHRTLMNTPPGASTTTPPSSRSDNQVG-------KLRRLLPGGD 122
           AW+R LL  L   + PT  T  ++  G      P     N+ G       +L++LLPGG+
Sbjct: 67  AWSRFLLQKLSSSSNPT-TTTSSSSDGIRILERPDKEGGNEEGGIEERLRELKKLLPGGE 126

Query: 123 RMDVCTLLEETANYIHCLSTQ 135
            M+V  +L E  NYI CL  Q
Sbjct: 127 EMNVEEMLSEIGNYIKCLELQ 146

The following BLAST results are available for this feature:

BLAST of CaUC08G143950 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008464343.1	7.1e-41	72.34	PREDICTED: transcription factor IBH1 [Cucumis melo] >KAA0031737.1 transcription ...	[more]
KAG7025295.1	9.5e-38	68.53	Transcription factor IBH1, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023005092.1	6.2e-37	67.13	transcription factor IBH1 [Cucurbita maxima]	[more]
KAG6575326.1	9.9e-35	66.67	Transcription factor IBH1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7...	[more]
XP_023548405.1	3.7e-34	65.96	transcription factor IBH1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CaUC08G143950 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7XR02	1.8e-10	35.44	Transcription factor IBH1 OS=Oryza sativa subsp. japonica OX=39947 GN=IBH1 PE=1 ...	[more]
Q01I07	3.0e-10	35.44	Transcription factor IBH1 OS=Oryza sativa subsp. indica OX=39946 GN=IBH1 PE=3 SV...	[more]
Q9SKX1	5.3e-07	40.00	Transcription factor IBH1 OS=Arabidopsis thaliana OX=3702 GN=IBH1 PE=1 SV=1	[more]

BLAST of CaUC08G143950 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BPL2	3.4e-41	72.34	Transcription factor IBH1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S3CLD3	3.4e-41	72.34	transcription factor IBH1 OS=Cucumis melo OX=3656 GN=LOC103502249 PE=4 SV=1	[more]
A0A6J1KS83	3.0e-37	67.13	transcription factor IBH1 OS=Cucurbita maxima OX=3661 GN=LOC111498183 PE=4 SV=1	[more]
A0A0A0KDQ3	7.4e-36	70.15	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G020740 PE=4 SV=1	[more]
A0A2N9I4P0	1.8e-21	45.33	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS46872 PE=4 SV=1	[more]

BLAST of CaUC08G143950 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G43060.1	3.8e-08	40.00	ILI1 binding bHLH 1	[more]
AT4G30180.1	7.4e-04	35.80	sequence-specific DNA binding transcription factors;transcription regulators	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 134..156
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 77..108
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 77..102
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 134..154
None	No IPR available	PANTHER	PTHR33124:SF76	TRANSCRIPTION FACTOR IBH1-LIKE	coord: 3..136
IPR044660	Transcription factor IBH1-like	PANTHER	PTHR33124	TRANSCRIPTION FACTOR IBH1-LIKE 1	coord: 3..136
IPR044549	Transcription factor IBH1-like, bHLH domain	CDD	cd11444	bHLH_AtIBH1_like	coord: 101..136 e-value: 2.08626E-11 score: 55.3212

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC08G143950.1	CaUC08G143950.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0005488	binding