CaUC08G143640 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGGATCCCGCGAACCACCGAGTCTTTGAACGCAAGTTGCGCCCGGAGCCTTCTGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCGCTGCCCCCCCACACAACACCCCACGCGGGCTCGTTGCGTAGGCAGGGGCACACGCTGGCCTCCCGTGCGCACCGTCGTGCGGATGGCTTAA ATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGGATCCCGCGAACCACCGAGTCTTTGAACGCAAGTTGCGCCCGGAGCCTTCTGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCGCTGCCCCCCCACACAACACCCCACGCGGGCTCGTTGCGTAGGCAGGGGCACACGCTGGCCTCCCGTGCGCACCGTCGTGCGGATGGCTTAA ATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGGATCCCGCGAACCACCGAGTCTTTGAACGCAAGTTGCGCCCGGAGCCTTCTGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCGCTGCCCCCCCACACAACACCCCACGCGGGCTCGTTGCGTAGGCAGGGGCACACGCTGGCCTCCCGTGCGCACCGTCGTGCGGATGGCTTAA MKNVAKCDTWCELQDPANHRVFERKLRPEPSGRGHVCLGVTHRCPPTQHPTRARCVGRGTRWPPVRTVVRMA Homology
BLAST of CaUC08G143640 vs. NCBI nr
Match: KAG2411222.1 (hypothetical protein I3760_Q020200 [Carya illinoinensis]) HSP 1 Score: 110.5 bits (275), Expect = 5.9e-21 Identity = 51/66 (77.27%), Postives = 54/66 (81.82%), Query Frame = 0
BLAST of CaUC08G143640 vs. NCBI nr
Match: KAG2411239.1 (hypothetical protein I3760_Q018500 [Carya illinoinensis]) HSP 1 Score: 109.0 bits (271), Expect = 1.7e-20 Identity = 49/65 (75.38%), Postives = 51/65 (78.46%), Query Frame = 0
BLAST of CaUC08G143640 vs. NCBI nr
Match: TKY53825.1 (hypothetical protein E2542_SST25368 [Spatholobus suberectus]) HSP 1 Score: 106.7 bits (265), Expect = 8.6e-20 Identity = 49/72 (68.06%), Postives = 52/72 (72.22%), Query Frame = 0
BLAST of CaUC08G143640 vs. NCBI nr
Match: TKY45628.1 (hypothetical protein E2542_SST30378 [Spatholobus suberectus] >TKY53828.1 hypothetical protein E2542_SST25371 [Spatholobus suberectus]) HSP 1 Score: 106.7 bits (265), Expect = 8.6e-20 Identity = 49/72 (68.06%), Postives = 52/72 (72.22%), Query Frame = 0
BLAST of CaUC08G143640 vs. NCBI nr
Match: KAG8611767.1 (hypothetical protein MANES_S026816v8 [Manihot esculenta]) HSP 1 Score: 106.3 bits (264), Expect = 1.1e-19 Identity = 51/66 (77.27%), Postives = 53/66 (80.30%), Query Frame = 0
BLAST of CaUC08G143640 vs. ExPASy TrEMBL
Match: A0A2Z6SHB0 (Uncharacterized protein OS=Rhizophagus clarus OX=94130 GN=RclHR1_00930028 PE=4 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 1.6e-19 Identity = 47/65 (72.31%), Postives = 50/65 (76.92%), Query Frame = 0
BLAST of CaUC08G143640 vs. ExPASy TrEMBL
Match: V4UD02 (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10029524mg PE=4 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 2.7e-19 Identity = 46/61 (75.41%), Postives = 49/61 (80.33%), Query Frame = 0
BLAST of CaUC08G143640 vs. ExPASy TrEMBL
Match: M1D9E9 (Uncharacterized protein OS=Solanum tuberosum OX=4113 PE=4 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 1.3e-18 Identity = 47/66 (71.21%), Postives = 50/66 (75.76%), Query Frame = 0
BLAST of CaUC08G143640 vs. ExPASy TrEMBL
Match: M1DSR7 (Uncharacterized protein OS=Solanum tuberosum OX=4113 PE=4 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 1.3e-18 Identity = 47/66 (71.21%), Postives = 50/66 (75.76%), Query Frame = 0
BLAST of CaUC08G143640 vs. ExPASy TrEMBL
Match: U5FGY4 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_005G132300 PE=4 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 8.7e-18 Identity = 49/79 (62.03%), Postives = 54/79 (68.35%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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