CaUC08G141840 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC08G141840
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, chloroplastic
Location	Ciama_Chr08: 1770205 .. 1771590 (+)
RNA-Seq Expression	CaUC08G141840
Synteny	CaUC08G141840

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTAGAGGTGATGAAACATATAGGTGGCTTACAAGTTGGGGGTGGGATAAATTCAGAAAATGCTTCTAGTTATATTGAAGAAGGAGCTAGCCATGTCATTGTTACTTCAGTAAGTTATTTCCTTTTATCTATTTATGATTTATGATATTGCTAAATGCATTGGCCGAAATGAGGCAATGTAACATGATCCTGAACTTCTGCAACACTGAACCTCGTTGAGCTATTTTAGTACTTGAACATAAAATATAATTAAGATGACATTAAAAAGGTTAATTGGCCTTAAGTGAACTGTTTTGGAACTATCCATTTTAAATGTTGTATGTTTCTTGGTTCTGTCACAGTATGTGTTCAACAATGGACAAATGGATCTTACAAGGCTTAAAGATCTTGTTCGCATTGTTGGGAAACAGAGGCTTGTGCTGGATCTTAGTTGTAGAAAAAAGGTACTTCTTTTTGTGCTATTTTTGTTGATTTAGAAGCTATCATGATTGATTAACATCCAAAGTTATGGTTAACCCTTTAGACGTCAGCCATTTTTTTTTTTCCTATCTGTGAGTATCCGGGCTAGTTTATGCATACCTCAACTATTCTATCATGGTTTTTAGATGTAAGCATATTATCTATCATGGATTTAATCTGAGAAGTGACCCGAAGTCAACTGCACTGAAACGAACAAACCGAACGAACTATTAAATTTATAGCACCTTCTTGCTCTATTTTAGATTCAACATTGCCTTTTTCAGTTTGAGGCTTCACTAACATTTGTTTATGCTCATGTATTGATTAACATTTAGTTTCGATTTAGGAAGGTAAATATGCAATTGTGACTGATAGATGGCAGAAGTTCAGCGATGTTTTTCTTGATGAGGAAGTCCTGGCTTTCCTGGCTGACTATGCAGATGAGTTTTTGGTCCATGGTGTGGATGTTGAAGGGAAAAAGTAAGTCGTGATGCTGAAATTATGTTTCTGTGGTTGAATTCATTTATATATCTTGACATATGTTATTTGATTAATATAGACTTGGCATTGATGAAGAGCTAGTGATTCATCGGTTCGTCTGCTCCTCATTGCCTCCAAATTTTTTTACTTGTTTGCCCATCTCTCGAAGGACAAAAGACGGATAATGATCTGGTAATATCAACAGTACATGCAAACTTCCTACCCTCGTGTTGCATCAAAATACTGATCTTGCTTTTAAACATGGCAGATTCCTGTCACATATGCAGGCGGGGTCACAACAATGGCAGACTTTGAAAGGATAAAAGATGCGGGCATGGGGCGTGTGGACGTTACCGTGGGAAGTGCTTTGGATATTTTTGGGAGAAATATGGCATACAAGGATGTTGTTGCATGGCATGCCAGGCAGAAGGTATTAACAGTTTAG

mRNA sequence

ATGTTAGAGGTGATGAAACATATAGGTGGCTTACAAGTTGGGGGTGGGATAAATTCAGAAAATGCTTCTAGTTATATTGAAGAAGGAGCTAGCCATGTCATTGTTACTTCATATGTGTTCAACAATGGACAAATGGATCTTACAAGGCTTAAAGATCTTGTTCGCATTGTTGGGAAACAGAGGCTTGTGCTGGATCTTAGTTGTAGAAAAAAGGAAGGTAAATATGCAATTGTGACTGATAGATGGCAGAAGTTCAGCGATGTTTTTCTTGATGAGGAAGTCCTGGCTTTCCTGGCTGACTATGCAGATGAGTTTTTGGTCCATGGTGTGGATGTTGAAGGGAAAAAACTTGGCATTGATGAAGAGCTAGTGATTCATCGGTTCATTCCTGTCACATATGCAGGCGGGGTCACAACAATGGCAGACTTTGAAAGGATAAAAGATGCGGGCATGGGGCGTGTGGACGTTACCGTGGGAAGTGCTTTGGATATTTTTGGGAGAAATATGGCATACAAGGATGTTGTTGCATGGCATGCCAGGCAGAAGGTATTAACAGTTTAG

Coding sequence (CDS)

ATGTTAGAGGTGATGAAACATATAGGTGGCTTACAAGTTGGGGGTGGGATAAATTCAGAAAATGCTTCTAGTTATATTGAAGAAGGAGCTAGCCATGTCATTGTTACTTCATATGTGTTCAACAATGGACAAATGGATCTTACAAGGCTTAAAGATCTTGTTCGCATTGTTGGGAAACAGAGGCTTGTGCTGGATCTTAGTTGTAGAAAAAAGGAAGGTAAATATGCAATTGTGACTGATAGATGGCAGAAGTTCAGCGATGTTTTTCTTGATGAGGAAGTCCTGGCTTTCCTGGCTGACTATGCAGATGAGTTTTTGGTCCATGGTGTGGATGTTGAAGGGAAAAAACTTGGCATTGATGAAGAGCTAGTGATTCATCGGTTCATTCCTGTCACATATGCAGGCGGGGTCACAACAATGGCAGACTTTGAAAGGATAAAAGATGCGGGCATGGGGCGTGTGGACGTTACCGTGGGAAGTGCTTTGGATATTTTTGGGAGAAATATGGCATACAAGGATGTTGTTGCATGGCATGCCAGGCAGAAGGTATTAACAGTTTAG

Protein sequence

MLEVMKHIGGLQVGGGINSENASSYIEEGASHVIVTSYVFNNGQMDLTRLKDLVRIVGKQRLVLDLSCRKKEGKYAIVTDRWQKFSDVFLDEEVLAFLADYADEFLVHGVDVEGKKLGIDEELVIHRFIPVTYAGGVTTMADFERIKDAGMGRVDVTVGSALDIFGRNMAYKDVVAWHARQKVLTV

Homology

[Close]

BLAST of CaUC08G141840 vs. NCBI nr
Match: XP_008459605.1 (PREDICTED: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, chloroplastic isoform X1 [Cucumis melo] >XP_016902441.1 PREDICTED: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 327.8 bits (839), Expect = 6.1e-86
Identity = 168/179 (93.85%), Postives = 169/179 (94.41%), Query Frame = 0


Query: 9   GGLQVGGGINSENASSYIEEGASHVIVTSYVFNNGQMDLTRLKDLVRIVGKQRLVLDLSC 68
           GGLQVGGGIN ENASSYIEEGASHVIVTSYVFNNGQMDLTRLKDLVRIVGKQRLVLDLSC
Sbjct: 132 GGLQVGGGINPENASSYIEEGASHVIVTSYVFNNGQMDLTRLKDLVRIVGKQRLVLDLSC 191

Query: 69  RKKEGKYAIVTDRWQKFSDVFLDEEVLAFLADYADEFLVHGVDVEGKKLGIDEELVI--- 128
           RKKEGKYAIVTDRWQKFSDVFLDEEVLAFLADYADEFLVHGVDVEGKKLGIDEELV    
Sbjct: 192 RKKEGKYAIVTDRWQKFSDVFLDEEVLAFLADYADEFLVHGVDVEGKKLGIDEELVTLLG 251

Query: 129 -HRFIPVTYAGGVTTMADFERIKDAGMGRVDVTVGSALDIFGRNMAYKDVVAWHARQKV 184
            +  IPVTYAGGVTTMAD ERIKDAGMGRVDVTVGSALDIFG NMAYKDVVAWHARQKV
Sbjct: 252 KYSSIPVTYAGGVTTMADLERIKDAGMGRVDVTVGSALDIFGGNMAYKDVVAWHARQKV 310

[Close]

BLAST of CaUC08G141840 vs. NCBI nr
Match: XP_022978894.1 (1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, chloroplastic isoform X2 [Cucurbita maxima])

HSP 1 Score: 327.8 bits (839), Expect = 6.1e-86
Identity = 168/182 (92.31%), Postives = 170/182 (93.41%), Query Frame = 0


Query: 9   GGLQVGGGINSENASSYIEEGASHVIVTSYVFNNGQMDLTRLKDLVRIVGKQRLVLDLSC 68
           GGLQVGGGINSENAS YIEEGASHVIVTSYVFNNGQMDLTRLKDLVRIVGKQRLVLDLSC
Sbjct: 132 GGLQVGGGINSENASRYIEEGASHVIVTSYVFNNGQMDLTRLKDLVRIVGKQRLVLDLSC 191

Query: 69  RKKEGKYAIVTDRWQKFSDVFLDEEVLAFLADYADEFLVHGVDVEGKKLGIDEELVI--- 128
           RKKEGKYAIVTDRWQKFSDVFLDEEVLAFLADYADEFLVHGVDVEGKKLGIDEELV    
Sbjct: 192 RKKEGKYAIVTDRWQKFSDVFLDEEVLAFLADYADEFLVHGVDVEGKKLGIDEELVTLLG 251

Query: 129 -HRFIPVTYAGGVTTMADFERIKDAGMGRVDVTVGSALDIFGRNMAYKDVVAWHARQKVL 187
            +  IPVTYAGGVTTMAD ERIKDAG GRVDVTVGSALDIFG NMAYKDVVAWHA+QKV 
Sbjct: 252 KYSLIPVTYAGGVTTMADLERIKDAGKGRVDVTVGSALDIFGGNMAYKDVVAWHAKQKVP 311

[Close]

BLAST of CaUC08G141840 vs. NCBI nr
Match: XP_023545111.1 (1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 327.8 bits (839), Expect = 6.1e-86
Identity = 168/182 (92.31%), Postives = 170/182 (93.41%), Query Frame = 0


Query: 9   GGLQVGGGINSENASSYIEEGASHVIVTSYVFNNGQMDLTRLKDLVRIVGKQRLVLDLSC 68
           GGLQVGGGINSENAS YIEEGASHVIVTSYVFNNGQMDLTRLKDLVRIVGKQRLVLDLSC
Sbjct: 132 GGLQVGGGINSENASRYIEEGASHVIVTSYVFNNGQMDLTRLKDLVRIVGKQRLVLDLSC 191

Query: 69  RKKEGKYAIVTDRWQKFSDVFLDEEVLAFLADYADEFLVHGVDVEGKKLGIDEELVI--- 128
           RKKEGKYAIVTDRWQKFSDVFLDEEVLAFLADYADEFLVHGVDVEGKKLGIDEELV    
Sbjct: 192 RKKEGKYAIVTDRWQKFSDVFLDEEVLAFLADYADEFLVHGVDVEGKKLGIDEELVTLLG 251

Query: 129 -HRFIPVTYAGGVTTMADFERIKDAGMGRVDVTVGSALDIFGRNMAYKDVVAWHARQKVL 187
            +  IPVTYAGGVTTMAD ERIKDAG GRVDVTVGSALDIFG NMAYKDVVAWHA+QKV 
Sbjct: 252 KYSLIPVTYAGGVTTMADLERIKDAGKGRVDVTVGSALDIFGGNMAYKDVVAWHAKQKVP 311

[Close]

BLAST of CaUC08G141840 vs. NCBI nr
Match: XP_008459606.1 (PREDICTED: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 327.8 bits (839), Expect = 6.1e-86
Identity = 168/179 (93.85%), Postives = 169/179 (94.41%), Query Frame = 0


Query: 9   GGLQVGGGINSENASSYIEEGASHVIVTSYVFNNGQMDLTRLKDLVRIVGKQRLVLDLSC 68
           GGLQVGGGIN ENASSYIEEGASHVIVTSYVFNNGQMDLTRLKDLVRIVGKQRLVLDLSC
Sbjct: 86  GGLQVGGGINPENASSYIEEGASHVIVTSYVFNNGQMDLTRLKDLVRIVGKQRLVLDLSC 145

Query: 69  RKKEGKYAIVTDRWQKFSDVFLDEEVLAFLADYADEFLVHGVDVEGKKLGIDEELVI--- 128
           RKKEGKYAIVTDRWQKFSDVFLDEEVLAFLADYADEFLVHGVDVEGKKLGIDEELV    
Sbjct: 146 RKKEGKYAIVTDRWQKFSDVFLDEEVLAFLADYADEFLVHGVDVEGKKLGIDEELVTLLG 205

Query: 129 -HRFIPVTYAGGVTTMADFERIKDAGMGRVDVTVGSALDIFGRNMAYKDVVAWHARQKV 184
            +  IPVTYAGGVTTMAD ERIKDAGMGRVDVTVGSALDIFG NMAYKDVVAWHARQKV
Sbjct: 206 KYSSIPVTYAGGVTTMADLERIKDAGMGRVDVTVGSALDIFGGNMAYKDVVAWHARQKV 264

[Close]

BLAST of CaUC08G141840 vs. NCBI nr
Match: KAG7034499.1 (1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 327.8 bits (839), Expect = 6.1e-86
Identity = 168/182 (92.31%), Postives = 170/182 (93.41%), Query Frame = 0


Query: 9   GGLQVGGGINSENASSYIEEGASHVIVTSYVFNNGQMDLTRLKDLVRIVGKQRLVLDLSC 68
           GGLQVGGGINSENAS YIEEGASHVIVTSYVFNNGQMDLTRLKDLVRIVGKQRLVLDLSC
Sbjct: 151 GGLQVGGGINSENASRYIEEGASHVIVTSYVFNNGQMDLTRLKDLVRIVGKQRLVLDLSC 210

Query: 69  RKKEGKYAIVTDRWQKFSDVFLDEEVLAFLADYADEFLVHGVDVEGKKLGIDEELVI--- 128
           RKKEGKYAIVTDRWQKFSDVFLDEEVLAFLADYADEFLVHGVDVEGKKLGIDEELV    
Sbjct: 211 RKKEGKYAIVTDRWQKFSDVFLDEEVLAFLADYADEFLVHGVDVEGKKLGIDEELVTLLG 270

Query: 129 -HRFIPVTYAGGVTTMADFERIKDAGMGRVDVTVGSALDIFGRNMAYKDVVAWHARQKVL 187
            +  IPVTYAGGVTTMAD ERIKDAG GRVDVTVGSALDIFG NMAYKDVVAWHA+QKV 
Sbjct: 271 KYSLIPVTYAGGVTTMADLERIKDAGKGRVDVTVGSALDIFGGNMAYKDVVAWHAKQKVP 330

[Close]

BLAST of CaUC08G141840 vs. ExPASy Swiss-Prot
Match: O82782 (1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HISN3 PE=2 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 3.0e-75
Identity = 143/180 (79.44%), Postives = 155/180 (86.11%), Query Frame = 0


Query: 9   GGLQVGGGINSENASSYIEEGASHVIVTSYVFNNGQMDLTRLKDLVRIVGKQRLVLDLSC 68
           GGLQVGGGINSEN  SYIEEGASHVIVTSYVFNNG++DL RLKD+V IVGKQRL+LDLSC
Sbjct: 124 GGLQVGGGINSENCMSYIEEGASHVIVTSYVFNNGKIDLERLKDIVSIVGKQRLILDLSC 183

Query: 69  RKKEGKYAIVTDRWQKFSDVFLDEEVLAFLADYADEFLVHGVDVEGKKLGIDEELVI--- 128
           RKK+G+YAIVTDRWQKFSDV LDE+ L FL  ++DEFLVHGVDVEGKKLGIDEELV    
Sbjct: 184 RKKDGRYAIVTDRWQKFSDVILDEKSLEFLGGFSDEFLVHGVDVEGKKLGIDEELVALLG 243

Query: 129 -HRFIPVTYAGGVTTMADFERIKDAGMGRVDVTVGSALDIFGRNMAYKDVVAWHARQKVL 185
            +  IPVTYAGGVT M D ERIKDAG GRVDVTVGSALDIFG N+ YKDVVAWH +Q  L
Sbjct: 244 NYSPIPVTYAGGVTVMDDVERIKDAGKGRVDVTVGSALDIFGGNLPYKDVVAWHHKQHSL 303

[Close]

BLAST of CaUC08G141840 vs. ExPASy Swiss-Prot
Match: Q10184 (1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC3F10.09 PE=3 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 6.9e-40
Identity = 84/176 (47.73%), Postives = 117/176 (66.48%), Query Frame = 0


Query: 9   GGLQVGGGINSENASSYIEEGASHVIVTSYVFNNGQMDLTRLKDLVRIVGKQRLVLDLSC 68
           G LQ+GGGIN  NA ++++EGAS VIVTS++F + Q DL RLK +   +GK RLV+D+SC
Sbjct: 81  GALQIGGGINISNAQNWLQEGASKVIVTSWLFPDAQFDLDRLKAISSKIGKDRLVVDVSC 140

Query: 69  RKKEGKYAIVTDRWQKFSDVFLDEEVLAFLADYADEFLVHGVDVEGKKLGIDEELVIHR- 128
           R+K+ ++    ++WQ  +   L+EE L  L+ Y  EFL+H  DVEG   GIDE+LVI   
Sbjct: 141 RRKDNRWFAAINKWQVMTAFELNEENLDLLSQYCSEFLIHAADVEGLCKGIDEDLVIKLG 200

Query: 129 ---FIPVTYAGGVTTMADFERIKDAGMGRVDVTVGSALDIFGRNMAYKDVVAWHAR 181
               IP TYAGG  ++ D + +     G+VD+T+GSALDIFG  + +  VVAW+ R
Sbjct: 201 EWVKIPTTYAGGGRSIEDLDLVDKLSKGKVDLTIGSALDIFGGVLEFTRVVAWNRR 256

[Close]

BLAST of CaUC08G141840 vs. ExPASy Swiss-Prot
Match: Q6C2U0 (1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=HIS6 PE=3 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 3.4e-39
Identity = 84/183 (45.90%), Postives = 120/183 (65.57%), Query Frame = 0


Query: 11  LQVGGGINSENASSYIEEGASHVIVTSYVFNNGQMDLTRLKDLVRIV----GKQRLVLDL 70
           LQ+GGGIN +NA  +I+ GASHVIVTS++F + ++D+ RL DL  I+    GK+R+V+DL
Sbjct: 79  LQIGGGINHDNAEKWIKLGASHVIVTSFLFPDAKLDMKRLTDLEAILEPYGGKKRIVVDL 138

Query: 71  SCRKKEGKYAIVTDRWQKFSDVFLDEEVLAFLADYADEFLVHGVDVEGKKLGIDEELVIH 130
           SCR+K+GK+ +  +RWQ  +D  +++E L  LA + DEFL+H  DVEG   GIDEELV  
Sbjct: 139 SCRRKDGKWVVAMNRWQTLTDTEVNKETLEQLAKHCDEFLIHAADVEGLCNGIDEELVTK 198

Query: 131 --------RFIPVTYAGGVTTMADFERIKDAGMGRVDVTVGSALDIFGRN-MAYKDVVAW 181
                      PVTYAGG   + D   ++    G+VD+T GSALD+FG + + + D V W
Sbjct: 199 LGEWLEEGHLPPVTYAGGAKNIDDLALVQKLSHGKVDLTYGSALDVFGGDKVKFSDCVEW 258

[Close]

BLAST of CaUC08G141840 vs. ExPASy Swiss-Prot
Match: Q7RXQ8 (1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=his-7 PE=3 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 1.6e-33
Identity = 77/181 (42.54%), Postives = 113/181 (62.43%), Query Frame = 0


Query: 9   GGLQVGGGINSENASSYIEEGASHVIVTSYVFNNGQMDLTRLKDLVRIV--GKQRLVLDL 68
           GGLQVGGGI   NA  ++E GA  VI+TSY+F NG+   + L  ++  +   K +LV+DL
Sbjct: 77  GGLQVGGGITDANAREWVEAGAEKVIITSYLFPNGKFSQSHLDAVLAALDGDKSKLVIDL 136

Query: 69  SCRKK-EGKYAIVTDRWQKFSDVFLDEEVLAFLADYADEFLVHGVDVEGKKLGIDEELVI 128
           SCR++ + ++ +  ++WQ  +D+ + EE +  L  Y  EFL+H  D EG + GIDE+LV 
Sbjct: 137 SCRRQGDDRWFVAMNKWQTITDMEVSEESIKALEPYCSEFLIHAADNEGLQKGIDEKLVQ 196

Query: 129 HR----FIPVTYAGGVTTMADFERIKDAGMGRVDVTVGSALDIF-GRNMAYKDVVAWHAR 182
                  IPVTYAGG   + D E +K    G+VD+T+GSALD F G+ +  ++ V W+ R
Sbjct: 197 RLSEWCSIPVTYAGGGRNLEDLETVKRLSGGKVDLTIGSALDCFGGKGVTLQECVEWNRR 256

[Close]

BLAST of CaUC08G141840 vs. ExPASy Swiss-Prot
Match: Q9HFV5 (1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase OS=Candida albicans OX=5476 GN=HIS6 PE=3 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 5.3e-32
Identity = 74/186 (39.78%), Postives = 119/186 (63.98%), Query Frame = 0


Query: 11  LQVGGGINSENASSYIEEGASHVIVTSYVFNNG-----QMDLTRLKDLVRIVGKQRLVLD 70
           LQVGGGIN +NA  ++++GASHVI+TS++F        ++D  +L+++ +++GK++L++D
Sbjct: 87  LQVGGGINLDNAQYWLDQGASHVILTSWLFTKNEQDKMELDFGKLREISKLIGKEKLIVD 146

Query: 71  LSCRK--KEGK--YAIVTDRWQKFSDVFLDEEVLAFLADYADEFLVHGVDVEGKKLGIDE 130
           LSCR   + GK  + +  ++WQ  +D  L  E L  ++ Y DEFL+H  DVEG   GIDE
Sbjct: 147 LSCRTVIENGKTNWYVAMNKWQTITDTILSAEFLLKVSAYCDEFLIHAADVEGLCKGIDE 206

Query: 131 ELV--IHRFIPV------TYAGGVTTMADFERIKDAGMGRVDVTVGSALDIF-GRNMAYK 179
           +LV  +  + PV       YAGG  ++ D + +     G+VD+T GS+LDIF G+ + + 
Sbjct: 207 KLVENLGEWCPVGFEEKIVYAGGAKSINDLDTVAKLSKGKVDLTYGSSLDIFSGKLVNFT 266

[Close]

BLAST of CaUC08G141840 vs. ExPASy TrEMBL
Match: A0A1S3CBT6 (1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103498684 PE=3 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 3.0e-86
Identity = 168/179 (93.85%), Postives = 169/179 (94.41%), Query Frame = 0


Query: 9   GGLQVGGGINSENASSYIEEGASHVIVTSYVFNNGQMDLTRLKDLVRIVGKQRLVLDLSC 68
           GGLQVGGGIN ENASSYIEEGASHVIVTSYVFNNGQMDLTRLKDLVRIVGKQRLVLDLSC
Sbjct: 132 GGLQVGGGINPENASSYIEEGASHVIVTSYVFNNGQMDLTRLKDLVRIVGKQRLVLDLSC 191

Query: 69  RKKEGKYAIVTDRWQKFSDVFLDEEVLAFLADYADEFLVHGVDVEGKKLGIDEELVI--- 128
           RKKEGKYAIVTDRWQKFSDVFLDEEVLAFLADYADEFLVHGVDVEGKKLGIDEELV    
Sbjct: 192 RKKEGKYAIVTDRWQKFSDVFLDEEVLAFLADYADEFLVHGVDVEGKKLGIDEELVTLLG 251

Query: 129 -HRFIPVTYAGGVTTMADFERIKDAGMGRVDVTVGSALDIFGRNMAYKDVVAWHARQKV 184
            +  IPVTYAGGVTTMAD ERIKDAGMGRVDVTVGSALDIFG NMAYKDVVAWHARQKV
Sbjct: 252 KYSSIPVTYAGGVTTMADLERIKDAGMGRVDVTVGSALDIFGGNMAYKDVVAWHARQKV 310

[Close]

BLAST of CaUC08G141840 vs. ExPASy TrEMBL
Match: A0A6J1IV96 (1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111478709 PE=3 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 3.0e-86
Identity = 168/182 (92.31%), Postives = 170/182 (93.41%), Query Frame = 0


Query: 9   GGLQVGGGINSENASSYIEEGASHVIVTSYVFNNGQMDLTRLKDLVRIVGKQRLVLDLSC 68
           GGLQVGGGINSENAS YIEEGASHVIVTSYVFNNGQMDLTRLKDLVRIVGKQRLVLDLSC
Sbjct: 132 GGLQVGGGINSENASRYIEEGASHVIVTSYVFNNGQMDLTRLKDLVRIVGKQRLVLDLSC 191

Query: 69  RKKEGKYAIVTDRWQKFSDVFLDEEVLAFLADYADEFLVHGVDVEGKKLGIDEELVI--- 128
           RKKEGKYAIVTDRWQKFSDVFLDEEVLAFLADYADEFLVHGVDVEGKKLGIDEELV    
Sbjct: 192 RKKEGKYAIVTDRWQKFSDVFLDEEVLAFLADYADEFLVHGVDVEGKKLGIDEELVTLLG 251

Query: 129 -HRFIPVTYAGGVTTMADFERIKDAGMGRVDVTVGSALDIFGRNMAYKDVVAWHARQKVL 187
            +  IPVTYAGGVTTMAD ERIKDAG GRVDVTVGSALDIFG NMAYKDVVAWHA+QKV 
Sbjct: 252 KYSLIPVTYAGGVTTMADLERIKDAGKGRVDVTVGSALDIFGGNMAYKDVVAWHAKQKVP 311

[Close]

BLAST of CaUC08G141840 vs. ExPASy TrEMBL
Match: A0A1S3CA44 (1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103498684 PE=3 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 3.0e-86
Identity = 168/179 (93.85%), Postives = 169/179 (94.41%), Query Frame = 0


Query: 9   GGLQVGGGINSENASSYIEEGASHVIVTSYVFNNGQMDLTRLKDLVRIVGKQRLVLDLSC 68
           GGLQVGGGIN ENASSYIEEGASHVIVTSYVFNNGQMDLTRLKDLVRIVGKQRLVLDLSC
Sbjct: 86  GGLQVGGGINPENASSYIEEGASHVIVTSYVFNNGQMDLTRLKDLVRIVGKQRLVLDLSC 145

Query: 69  RKKEGKYAIVTDRWQKFSDVFLDEEVLAFLADYADEFLVHGVDVEGKKLGIDEELVI--- 128
           RKKEGKYAIVTDRWQKFSDVFLDEEVLAFLADYADEFLVHGVDVEGKKLGIDEELV    
Sbjct: 146 RKKEGKYAIVTDRWQKFSDVFLDEEVLAFLADYADEFLVHGVDVEGKKLGIDEELVTLLG 205

Query: 129 -HRFIPVTYAGGVTTMADFERIKDAGMGRVDVTVGSALDIFGRNMAYKDVVAWHARQKV 184
            +  IPVTYAGGVTTMAD ERIKDAGMGRVDVTVGSALDIFG NMAYKDVVAWHARQKV
Sbjct: 206 KYSSIPVTYAGGVTTMADLERIKDAGMGRVDVTVGSALDIFGGNMAYKDVVAWHARQKV 264

[Close]

BLAST of CaUC08G141840 vs. ExPASy TrEMBL
Match: A0A6J1IUK2 (1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111478709 PE=3 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 3.9e-86
Identity = 167/181 (92.27%), Postives = 170/181 (93.92%), Query Frame = 0


Query: 9   GGLQVGGGINSENASSYIEEGASHVIVTSYVFNNGQMDLTRLKDLVRIVGKQRLVLDLSC 68
           GGLQVGGGINSENAS YIEEGASHVIVTSYVFNNGQMDLTRLKDLVRIVGKQRLVLDLSC
Sbjct: 132 GGLQVGGGINSENASRYIEEGASHVIVTSYVFNNGQMDLTRLKDLVRIVGKQRLVLDLSC 191

Query: 69  RKKEGKYAIVTDRWQKFSDVFLDEEVLAFLADYADEFLVHGVDVEGKKLGIDEELVI--- 128
           RKKEGKYAIVTDRWQKFSDVFLDEEVLAFLADYADEFLVHGVDVEGKKLGIDEELV    
Sbjct: 192 RKKEGKYAIVTDRWQKFSDVFLDEEVLAFLADYADEFLVHGVDVEGKKLGIDEELVTLLG 251

Query: 129 -HRFIPVTYAGGVTTMADFERIKDAGMGRVDVTVGSALDIFGRNMAYKDVVAWHARQKVL 186
            +  IPVTYAGGVTTMAD ERIKDAG GRVDVTVGSALDIFG NMAYKDVVAWHA+QKVL
Sbjct: 252 KYSLIPVTYAGGVTTMADLERIKDAGKGRVDVTVGSALDIFGGNMAYKDVVAWHAKQKVL 311

[Close]

BLAST of CaUC08G141840 vs. ExPASy TrEMBL
Match: A0A6J1EDZ2 (1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111433295 PE=3 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 3.9e-86
Identity = 167/181 (92.27%), Postives = 170/181 (93.92%), Query Frame = 0


Query: 9   GGLQVGGGINSENASSYIEEGASHVIVTSYVFNNGQMDLTRLKDLVRIVGKQRLVLDLSC 68
           GGLQVGGGINSENAS YIEEGASHVIVTSYVFNNGQMDLTRLKDLVRIVGKQRLVLDLSC
Sbjct: 132 GGLQVGGGINSENASRYIEEGASHVIVTSYVFNNGQMDLTRLKDLVRIVGKQRLVLDLSC 191

Query: 69  RKKEGKYAIVTDRWQKFSDVFLDEEVLAFLADYADEFLVHGVDVEGKKLGIDEELVI--- 128
           RKKEGKYAIVTDRWQKFSDVFLDEEVLAFLADYADEFLVHGVDVEGKKLGIDEELV    
Sbjct: 192 RKKEGKYAIVTDRWQKFSDVFLDEEVLAFLADYADEFLVHGVDVEGKKLGIDEELVTLLG 251

Query: 129 -HRFIPVTYAGGVTTMADFERIKDAGMGRVDVTVGSALDIFGRNMAYKDVVAWHARQKVL 186
            +  IPVTYAGGVTTMAD ERIKDAG GRVDVTVGSALDIFG NMAYKDVVAWHA+QKVL
Sbjct: 252 KYSLIPVTYAGGVTTMADLERIKDAGKGRVDVTVGSALDIFGGNMAYKDVVAWHAKQKVL 311

[Close]

BLAST of CaUC08G141840 vs. TAIR 10
Match: AT2G36230.1 (Aldolase-type TIM barrel family protein )

HSP 1 Score: 282.7 bits (722), Expect = 2.1e-76
Identity = 143/180 (79.44%), Postives = 155/180 (86.11%), Query Frame = 0


Query: 9   GGLQVGGGINSENASSYIEEGASHVIVTSYVFNNGQMDLTRLKDLVRIVGKQRLVLDLSC 68
           GGLQVGGGINSEN  SYIEEGASHVIVTSYVFNNG++DL RLKD+V IVGKQRL+LDLSC
Sbjct: 124 GGLQVGGGINSENCMSYIEEGASHVIVTSYVFNNGKIDLERLKDIVSIVGKQRLILDLSC 183

Query: 69  RKKEGKYAIVTDRWQKFSDVFLDEEVLAFLADYADEFLVHGVDVEGKKLGIDEELVI--- 128
           RKK+G+YAIVTDRWQKFSDV LDE+ L FL  ++DEFLVHGVDVEGKKLGIDEELV    
Sbjct: 184 RKKDGRYAIVTDRWQKFSDVILDEKSLEFLGGFSDEFLVHGVDVEGKKLGIDEELVALLG 243

Query: 129 -HRFIPVTYAGGVTTMADFERIKDAGMGRVDVTVGSALDIFGRNMAYKDVVAWHARQKVL 185
            +  IPVTYAGGVT M D ERIKDAG GRVDVTVGSALDIFG N+ YKDVVAWH +Q  L
Sbjct: 244 NYSPIPVTYAGGVTVMDDVERIKDAGKGRVDVTVGSALDIFGGNLPYKDVVAWHHKQHSL 303

The following BLAST results are available for this feature:

BLAST of CaUC08G141840 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008459605.1	6.1e-86	93.85	PREDICTED: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imid...	[more]
XP_022978894.1	6.1e-86	92.31	1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-car...	[more]
XP_023545111.1	6.1e-86	92.31	1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-car...	[more]
XP_008459606.1	6.1e-86	93.85	PREDICTED: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imid...	[more]
KAG7034499.1	6.1e-86	92.31	1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-car...	[more]

BLAST of CaUC08G141840 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O82782	3.0e-75	79.44	1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-car...	[more]
Q10184	6.9e-40	47.73	1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-car...	[more]
Q6C2U0	3.4e-39	45.90	1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-car...	[more]
Q7RXQ8	1.6e-33	42.54	1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-car...	[more]
Q9HFV5	5.3e-32	39.78	1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-car...	[more]

BLAST of CaUC08G141840 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CBT6	3.0e-86	93.85	1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-car...	[more]
A0A6J1IV96	3.0e-86	92.31	1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-car...	[more]
A0A1S3CA44	3.0e-86	93.85	1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-car...	[more]
A0A6J1IUK2	3.9e-86	92.27	1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-car...	[more]
A0A6J1EDZ2	3.9e-86	92.27	1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-car...	[more]

BLAST of CaUC08G141840 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G36230.1	2.1e-76	79.44	Aldolase-type TIM barrel family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006062	Histidine biosynthesis protein	PFAM	PF00977	His_biosynth	coord: 11..162 e-value: 1.4E-23 score: 83.5
IPR013785	Aldolase-type TIM barrel	GENE3D	3.20.20.70	Aldolase class I	coord: 2..182 e-value: 2.5E-62 score: 212.5
IPR011858	His6-like, eukaryotic-type	TIGRFAM	TIGR02129	TIGR02129	coord: 8..178 e-value: 2.5E-74 score: 248.1
None	No IPR available	PANTHER	PTHR43090:SF5	1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] IMIDAZOLE-4-CARBOXAMIDE ISOMERASE, CHLOROPLASTIC	coord: 8..183
IPR044524	Histidine biosynthesis, HisA-like	PANTHER	PTHR43090	1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] IMIDAZOLE-4-CARBOXAMIDE ISOMERASE	coord: 8..183
IPR011060	Ribulose-phosphate binding barrel	SUPERFAMILY	51366	Ribulose-phoshate binding barrel	coord: 11..180

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC08G141840.1	CaUC08G141840.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000105	histidine biosynthetic process
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0003949	1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity
molecular_function	GO:0003824	catalytic activity