CaUC07G140320 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGATCAACTCTTTCTGTTCTTTAGCCGTCGCCTCCGGCTATAAGTTTGGCATTTCTTCCTCCTCTAAAACCCTAAAAAGAATGGGGGGTTTAGAAAATGCAGACAAGTCTTCTGAAGCTTCTCTTAGAAACCCTAGAAGGAAGCGCAAACAGCGGCCTCCAAACAAGCCTAAGAACGCCAAGAAGAGGAAGCCCAATGCTACCCACAATCACAATGCCCATAACCCCACCAATGGTAGTGAAAACAATGCATCGGAGGCACTTCCATTGGAACCCTTCAGCTTTTTTCTGGATGAGTTCCAGACTGCTAATGGTGTGCAGGTTTCTTCGCTTGAGTTTGAGTCCATGAAAGGTACTTTACTAATCTGGATCATATTCTTGTAACATCTTTTGGAGTGTTTAATTGCTTTTGGCATTCTAATTAACCGTTTTAGTAAAATGGTCTTTAAAGTATGCATTTTTCTGTAATGCGTGAGAATTTATCTGATTTTTGTTATCATCGGAGAATTTTGTAGATAGATGCATTCTGGGTCCTCCTGAAAGTTCAGTTCAGGATGATAAAACTTTGGTGAAACATATCAAGGAAGCTTTTGGGTCATCCTGGAAAGAAGTTCTTTGTAAAGGGGAACACTTGGAAGGAAGGACTGAACCTGGCAGTCCTGCTGTTCTTATAATCAGCACATCTGCACTTAGGTCAATTGAACTTTTAAAGTAAGATGGAGACTGCTTTTCTGCTGGTATTGATGTATATGGAATAAGTGCCTGTTTTTGTCTAACTCATTTTTATTCATCAGGGGTTTTCGATCGCTAACTCAAGAATGCCATGCTGTAAAGCTATTTTCAAAGCACATGAAGATTGAGGAACAGGTACTTTGAAGTTTCTTTCCATGCTCTTTTCTCTTTTAGATGATTCAAAGATAGGAGTAACATATGTTTTCGTTGGTCAATAATGTTGCAAGTTGTTGGTGGTTCACTTATTTGTCAATTGAATGTTTGTCGTATATCAACACTATACAGAGTGCGGATGATTATTGTCTACATTTTGCTTGCTGGAACAAGTGGGAGAAACTCCACGACATGTTTTAGAGTTTCAAAGTATTCAAATTGTTATCTTTATTTTGAAACCACCTCTTAGTTTCAAAATTTTGGGTTTGGGAGATGAAGATAATTAAAATAATCATCAGAGGCAAAAGCACTGCTGAATTTGATGGTTTGCACGTCAGTCTGATCCTGTATTTTCATTACTTTTGCTTTTAATTGTCCTGATTTCAGAACCCGGTCTTCTCTTTGTACTTAGTTCCTGTTTTGATCTTCATGGTCACATGATTAATTATGAATAATGTTTATAATATGCTGCTTTTCTTGATGCAAGCTCAAGCAGTGATTTAGCTTCTTGATTTTTGAACGCATATCAGCAATAGCAATTTGTGATTTTTATGGCTCTATTGTTTTTTTGGTAACTGGATGTCTTGGCCAATTACTGGGTTGCAAGTTATTTCATATTTTTGGAGTGAGACATGTTATGCATCTGTCCTACTAGTTTATTTTATTGGGTTTGGGATATGATGACAAGCTAGAAAAATCTCTCAGATGCAGCTGCTGTGCTGAACTTGATATTTGCACGTCAGTCTGATCCCATATTCTCAATGACATATCGACATAGTTGTCATTTCTGAGCTTCTGAATGCTAGACTTGTATTTACGTTATTATTTTTATTGATTTTTTAAATATGGATAAAGAAAATGGTATTCTAGCATTCCCTCTAGCCTCTTGAAACAAACATTTACATCTTTAACGTTTCCTGCTTTAAAAATTGTGTGTTTCCCATTCTTCTTTTGATTTAAGTACAACCATTTTATGCACGAATCTGTTACTTTTATAAGAAATCTTCTAAGTTTGGGAAATGATGACAAATTTGAAATGTTCAACTGAGGTAGATACTGTGCTGAACTCTATTGCACGTCAGTCTGATCCCTATAATCTTTTATTGGGTGTAATCTAAGTTCTTACCGTGGAAAGTATTTCTTTTGGTCCAAGATTGAGGGGACAGGGTGAATTCCGGGTTTTGTACTTCTGTTGTGATTTGGATCATTATCTCGAATCCACATTTCTGCTGAATTGGCAAAAATCCTTTTATCAAATGAAACTGCATCTCCTCGAACCTCCATGTAGTCATAGTATTAGATTAGCATAATTCCAAATGACATCTTATTTCAATTTTCTCAAACTGTCTATAATGCAGTCTTACTTCGTGTTTTTGTTGCATTGCCATGTGATTTCTTAAAATCTTCAATTGTCAGTGTTGGTTTTCAGTTTTGCTATTTTTAATGGTGGACGTGCTGAAGGGATTGACCATAAGCTTCTTGAACTGTTATTGTTTTTCCCTTTATGATGGGTGCAGGTACAGCTGTTGAAGAACTGTGTTAACATTGCGAGTGGTACACCGAGCAGGTTAGCTTTTTCGGTATTGGGTTTATCACTATTGTGGTTCAAGAGTTGCAGTTCTAGGATTTTGTTTTTGATAAAGGAGTGCTGTTGAGTATCGTTGGAGGAAAATAAATATTGAAAATCTACAACTTTCTTCCTGGATCTACCACCTCTTGCATTGATACTAAAAATTCATTTAGTTTCTTTCCATTCATTATAAAGTTTGTCGACTGTTTGACTGATCCTTTATCACATTCCCTCTCTTCTGTATCAATTTTAGGATTAAAAAATTGATTGATCTTGAGGCCTTGGGGCTTTCAAGATTAGCAGTGATTGTGCTTGACATTCAACCAGACGTTAAGGGATATTCTTTATTTTCGCTTCCACAAGTCAGGTTTGAACCACATACTTGTGTCAATTTCCCTAATGTATGTTCAATTCTTTTGTTCTATGCTCTTAGATTATGAAAATACAAGTTAAAAAATTGTTTTTGTTTAGATACGGGAAAACTGATCATTGGACTCTCACTCATAAAATTCATTATTGCAGAGATGAATTCTGGGATTTGTACAAGAGCTACTTACACTCGCGAGTAGTCGACGGTGAGCTGCAAATTTGCCTCTTTGGACCTTTACAACCTTCTAGTAAACGAAGGAAAAAAGAAGTTGCCAGTCCAGGCGAATAA ATGATCAACTCTTTCTGTTCTTTAGCCGTCGCCTCCGGCTATAAGTTTGGCATTTCTTCCTCCTCTAAAACCCTAAAAAGAATGGGGGGTTTAGAAAATGCAGACAAGTCTTCTGAAGCTTCTCTTAGAAACCCTAGAAGGAAGCGCAAACAGCGGCCTCCAAACAAGCCTAAGAACGCCAAGAAGAGGAAGCCCAATGCTACCCACAATCACAATGCCCATAACCCCACCAATGGTAGTGAAAACAATGCATCGGAGGCACTTCCATTGGAACCCTTCAGCTTTTTTCTGGATGAGTTCCAGACTGCTAATGGTGTGCAGGTTTCTTCGCTTGAGTTTGAGTCCATGAAAGATAGATGCATTCTGGGTCCTCCTGAAAGTTCAGTTCAGGATGATAAAACTTTGGTGAAACATATCAAGGAAGCTTTTGGGTCATCCTGGAAAGAAGTTCTTTGTAAAGGGGAACACTTGGAAGGAAGGACTGAACCTGGCAGTCCTGCTGTTCTTATAATCAGCACATCTGCACTTAGGTCAATTGAACTTTTAAAGGGTTTTCGATCGCTAACTCAAGAATGCCATGCTGTAAAGCTATTTTCAAAGCACATGAAGATTGAGGAACAGAGTGCGGATGATTATTGTCTACATTTTGCTTGCTGGAACAATTTCAAAATTTTGGAACCCGGTCTTCTCTTTGTACAGCTGTTGAAGAACTGTGTTAACATTGCGAGTGGTACACCGAGCAGGATTAAAAAATTGATTGATCTTGAGGCCTTGGGGCTTTCAAGATTAGCAGTGATTGTGCTTGACATTCAACCAGACGTTAAGGGATATTCTTTATTTTCGCTTCCACAAGTCAGATACGGGAAAACTGATCATTGGACTCTCACTCATAAAATTCATTATTGCAGAGATGAATTCTGGGATTTGTACAAGAGCTACTTACACTCGCGAGTAGTCGACGGTGAGCTGCAAATTTGCCTCTTTGGACCTTTACAACCTTCTAGTAAACGAAGGAAAAAAGAAGTTGCCAGTCCAGGCGAATAA ATGATCAACTCTTTCTGTTCTTTAGCCGTCGCCTCCGGCTATAAGTTTGGCATTTCTTCCTCCTCTAAAACCCTAAAAAGAATGGGGGGTTTAGAAAATGCAGACAAGTCTTCTGAAGCTTCTCTTAGAAACCCTAGAAGGAAGCGCAAACAGCGGCCTCCAAACAAGCCTAAGAACGCCAAGAAGAGGAAGCCCAATGCTACCCACAATCACAATGCCCATAACCCCACCAATGGTAGTGAAAACAATGCATCGGAGGCACTTCCATTGGAACCCTTCAGCTTTTTTCTGGATGAGTTCCAGACTGCTAATGGTGTGCAGGTTTCTTCGCTTGAGTTTGAGTCCATGAAAGATAGATGCATTCTGGGTCCTCCTGAAAGTTCAGTTCAGGATGATAAAACTTTGGTGAAACATATCAAGGAAGCTTTTGGGTCATCCTGGAAAGAAGTTCTTTGTAAAGGGGAACACTTGGAAGGAAGGACTGAACCTGGCAGTCCTGCTGTTCTTATAATCAGCACATCTGCACTTAGGTCAATTGAACTTTTAAAGGGTTTTCGATCGCTAACTCAAGAATGCCATGCTGTAAAGCTATTTTCAAAGCACATGAAGATTGAGGAACAGAGTGCGGATGATTATTGTCTACATTTTGCTTGCTGGAACAATTTCAAAATTTTGGAACCCGGTCTTCTCTTTGTACAGCTGTTGAAGAACTGTGTTAACATTGCGAGTGGTACACCGAGCAGGATTAAAAAATTGATTGATCTTGAGGCCTTGGGGCTTTCAAGATTAGCAGTGATTGTGCTTGACATTCAACCAGACGTTAAGGGATATTCTTTATTTTCGCTTCCACAAGTCAGATACGGGAAAACTGATCATTGGACTCTCACTCATAAAATTCATTATTGCAGAGATGAATTCTGGGATTTGTACAAGAGCTACTTACACTCGCGAGTAGTCGACGGTGAGCTGCAAATTTGCCTCTTTGGACCTTTACAACCTTCTAGTAAACGAAGGAAAAAAGAAGTTGCCAGTCCAGGCGAATAA MINSFCSLAVASGYKFGISSSSKTLKRMGGLENADKSSEASLRNPRRKRKQRPPNKPKNAKKRKPNATHNHNAHNPTNGSENNASEALPLEPFSFFLDEFQTANGVQVSSLEFESMKDRCILGPPESSVQDDKTLVKHIKEAFGSSWKEVLCKGEHLEGRTEPGSPAVLIISTSALRSIELLKGFRSLTQECHAVKLFSKHMKIEEQSADDYCLHFACWNNFKILEPGLLFVQLLKNCVNIASGTPSRIKKLIDLEALGLSRLAVIVLDIQPDVKGYSLFSLPQVRYGKTDHWTLTHKIHYCRDEFWDLYKSYLHSRVVDGELQICLFGPLQPSSKRRKKEVASPGE Homology
BLAST of CaUC07G140320 vs. NCBI nr
Match: XP_038906103.1 (protein CMSS1 isoform X2 [Benincasa hispida]) HSP 1 Score: 478.0 bits (1229), Expect = 6.8e-131 Identity = 258/337 (76.56%), Postives = 273/337 (81.01%), Query Frame = 0
BLAST of CaUC07G140320 vs. NCBI nr
Match: XP_038906095.1 (protein CMSS1 isoform X1 [Benincasa hispida]) HSP 1 Score: 477.2 bits (1227), Expect = 1.2e-130 Identity = 257/335 (76.72%), Postives = 272/335 (81.19%), Query Frame = 0
BLAST of CaUC07G140320 vs. NCBI nr
Match: XP_038906109.1 (protein CMS1 isoform X3 [Benincasa hispida]) HSP 1 Score: 452.6 bits (1163), Expect = 3.1e-123 Identity = 245/318 (77.04%), Postives = 259/318 (81.45%), Query Frame = 0
BLAST of CaUC07G140320 vs. NCBI nr
Match: KAA0044636.1 (protein CMSS1 [Cucumis melo var. makuwa]) HSP 1 Score: 441.4 bits (1134), Expect = 7.1e-120 Identity = 242/315 (76.83%), Postives = 254/315 (80.63%), Query Frame = 0
BLAST of CaUC07G140320 vs. NCBI nr
Match: XP_004152079.1 (protein CMSS1 [Cucumis sativus] >KGN53128.1 hypothetical protein Csa_014754 [Cucumis sativus]) HSP 1 Score: 438.3 bits (1126), Expect = 6.0e-119 Identity = 237/315 (75.24%), Postives = 254/315 (80.63%), Query Frame = 0
BLAST of CaUC07G140320 vs. ExPASy Swiss-Prot
Match: Q5FVR6 (Protein CMSS1 OS=Rattus norvegicus OX=10116 GN=Cmss1 PE=1 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 5.8e-08 Identity = 42/150 (28.00%), Postives = 74/150 (49.33%), Query Frame = 0
BLAST of CaUC07G140320 vs. ExPASy Swiss-Prot
Match: Q2T9Y1 (Uncharacterized protein C3orf26 homolog OS=Bos taurus OX=9913 PE=2 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 9.9e-08 Identity = 45/150 (30.00%), Postives = 73/150 (48.67%), Query Frame = 0
BLAST of CaUC07G140320 vs. ExPASy Swiss-Prot
Match: Q9CZT6 (Protein CMSS1 OS=Mus musculus OX=10090 GN=Cmss1 PE=2 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 1.3e-07 Identity = 42/150 (28.00%), Postives = 74/150 (49.33%), Query Frame = 0
BLAST of CaUC07G140320 vs. ExPASy Swiss-Prot
Match: Q5XJK9 (Protein CMSS1 OS=Danio rerio OX=7955 GN=cmss1 PE=2 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 1.4e-06 Identity = 68/264 (25.76%), Postives = 114/264 (43.18%), Query Frame = 0
BLAST of CaUC07G140320 vs. ExPASy Swiss-Prot
Match: Q68EV5 (Protein CMSS1 OS=Xenopus laevis OX=8355 GN=cmss1 PE=2 SV=1) HSP 1 Score: 50.1 bits (118), Expect = 6.0e-05 Identity = 66/269 (24.54%), Postives = 112/269 (41.64%), Query Frame = 0
BLAST of CaUC07G140320 vs. ExPASy TrEMBL
Match: A0A5A7TR86 (Protein CMSS1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G003890 PE=4 SV=1) HSP 1 Score: 441.4 bits (1134), Expect = 3.4e-120 Identity = 242/315 (76.83%), Postives = 254/315 (80.63%), Query Frame = 0
BLAST of CaUC07G140320 vs. ExPASy TrEMBL
Match: A0A0A0KUA9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G017160 PE=4 SV=1) HSP 1 Score: 438.3 bits (1126), Expect = 2.9e-119 Identity = 237/315 (75.24%), Postives = 254/315 (80.63%), Query Frame = 0
BLAST of CaUC07G140320 vs. ExPASy TrEMBL
Match: A0A1S3BYM0 (protein CMSS1 OS=Cucumis melo OX=3656 GN=LOC103494501 PE=4 SV=1) HSP 1 Score: 436.8 bits (1122), Expect = 8.4e-119 Identity = 240/315 (76.19%), Postives = 252/315 (80.00%), Query Frame = 0
BLAST of CaUC07G140320 vs. ExPASy TrEMBL
Match: A0A5D3CZG6 (Protein CMSS1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G00910 PE=4 SV=1) HSP 1 Score: 434.5 bits (1116), Expect = 4.2e-118 Identity = 239/315 (75.87%), Postives = 251/315 (79.68%), Query Frame = 0
BLAST of CaUC07G140320 vs. ExPASy TrEMBL
Match: A0A6J1IXV6 (protein CMS1 OS=Cucurbita maxima OX=3661 GN=LOC111479452 PE=4 SV=1) HSP 1 Score: 433.3 bits (1113), Expect = 9.3e-118 Identity = 237/324 (73.15%), Postives = 258/324 (79.63%), Query Frame = 0
BLAST of CaUC07G140320 vs. TAIR 10
Match: AT2G43110.1 (unknown protein; Has 212 Blast hits to 211 proteins in 96 species: Archae - 0; Bacteria - 6; Metazoa - 62; Fungi - 91; Plants - 31; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). ) HSP 1 Score: 235.7 bits (600), Expect = 5.5e-62 Identity = 144/321 (44.86%), Postives = 196/321 (61.06%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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