CaUC07G139600 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC07G139600
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	MADS-box transcription factor 1
Location	Ciama_Chr07: 30369497 .. 30377389 (+)
RNA-Seq Expression	CaUC07G139600
Synteny	CaUC07G139600

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAAAAAGAAAGAAAGAGGGAAATTAAAAGAGAAGGGGAGATTTAGGGTAAAAAATTGAAAGGGGGGGTTTAAAAAAGAAAGAAAAAAAATGGGAAGAGGAAGAGTAGAGTTGAAGAGGATAGAGAACAAGATAAACAGGCAAGTAACATTTGCAAAGAGAAGAAATGGGCTTTTGAAGAAGGCTTATGAACTTTCTGTTCTTTGTGATGCCGAAGTTGCTCTCATCATCTTCTCCAATCGTGGCAAGCTCTATGAGTTCTGTAGTACTTCCAAGTAATTCTCTTTTTCTTCCTTTTTTTTTTTTTTCTCCATCTTTCTACCCTTTCAATTTCTCTCTCAATAACTCAAAATGAAAAAAAAAAAAAAAGTTGTTTTTTTTTTATATTAAAGTTTTTTATTTTATATGATTTTCATAATATTTATTGAACCATCTTTCCTTATTACACAGAATCAATGTCCTATTTTTTCCTTAATGGATGACATAGATTATTTAAACAACAAGGACAAAACACCTTAAAAATTAAAAATTTCTGACCCAAAAAAAAAAAAAAAAAAAAAAGGAAGAAGAATTTGGGGATCTTAATGATGGTTTTGGTTGTAAATTGGAATGTTTGGATCAGCATGCTCAAAACACTGGAGAGGTACCAAAAATGCAGTTATGGAGCGGTGGAGGTCACAAAACCGGCCAAAGAACTCGAGGTTAATTTTAGATTTATTAATTATTTTTTGAATTTAGATCTATGTTTTTATTTTATTTTATTTTATTTTTTTTTGGGGGGGGGGGGGGGGGTTTATTCTTGCAGAGTAGCTATAGAGAATACTTGAAGCTGAAGGCTAGGTTTGAGTCTTTACAAAGAACTCAGAGGTAATATTACAACGATACTTTTCTTTTTCTATTTTTAGGGATTTAGTGTATTTTTGTTAAATTATACATCTTAAATGATGGGATTAGCCTAATTATTTAATCAAATATGATTTTTCATATAAATATGTACACGTATAAAATAGCAAGTTTTGCTCAAAACATAATATTTACGTACAAATTATTCCTAGATATTTAATTCAAATCTCAAAATTTGAGTTATGAAAGAAACCTAAACCAGGTACTGAAGATCTATTTAGTAACTAATTTATTTCTTTATTTAATTAGTAATAGTTAAACTTATTTGTTTCTTTCTTTCTTTTATAAGCTCATTTTATTAATAAGAACTACCCATTTTCATTATTTTTATTCTTGAAATCTTGATAAGTTATTATTATTATTATTATTTTATAATGGATAAGAAAACTGATGGTAAGATTTAATTATTTGAGAACATTTTCTTTTTAAAATGTTTTTTTTTTTTAAACATTAATAACTTCATATATAAAAAGAGTAATTTCTTAGAAACAAACCAGCATATAAAGGAAGGATGCATTTCAATATATCCAATGGTCATGAGAGTGTGGTTACCATATTTGTGTTTGGTTATTGATAATGTTCTTGGTTTTGTAAAGTTGTATTTTGAAATTGGAAGTAGTCTAATGTGAAAGGATGGGTGGAAATGAATTATAAAGGTTTCTTTTGGTAACTATTTGGCTTTTTGTTTTTAGCTTTTGAAAATTAAGTTTATTTTCTCTCAAGTTCTTAAACTAGTTTGTATCTTTCTTGAGTTGAATTCTCAGCCTAATTCCAAAAACAATAATACGTTTTTAAAAACTACTTTTTTTTTTCCAAAACTTGGTTTGATTTTTTAAAAACATTGGTAAAAAGTAATTAACAAAACAAGAAATTTAGAGATGTAAGAGGTGTTTATAGGTTTAATCTTCAAAAACAAAAAGCAAAAAGCCAAATAATTACCAAATGAGGCCAACATGTTTCCAAAGTTGTTTTAGATTAGCTTAACTATGATGATTTAATATTTTACAAGTTTTCTTGACAACCAAATGTAGTAGGATGTAATAATTGTATCATGAACATTAGTTGATGTCGGTGCAAATTGACTTTGATATTCATGAATAAAAAAAAAAAAGGAAAAAAACACAATCTTGTACAAGAGAGGATGAAATCTAGGGTTTTTATTATAAAGCCTCATTTCAAAGTTCATCAAATTATAAATAAATAAACGACATTGGTAAATTAAAAGCTTTGAGGAATATTTTGAAATCTCTTGAGCTCTCTTTTGGGTTGTTTTTGGTTAATGAAATGTATTAATTAGATTTCCTGAAAAAGAACATTGAGGATAAAAAACCATATTGATAATCTCGTAATAAAAACAAAAATTTACCTCTAAGTTTCGATCAAGAAATGAACATGAACATGTTGATATTTCTCTTAAACGATATTTCAACTGAGTTGAGTGCATCCCTTAATCCTTTCTATCTTTTAGTATCTTGCTAAAAAAAAATATATATATTTCTCTCAAATTTCTCTATAGGTGTGTTTGAGAGTGCTCACAGAATAACCCCTTTTAGGCAAAAGCACGTTGATTCAAGTTATAACCTCTTGTTCTTTGGCAAAGTTTATAATAAACAAGCGTTTGGACCAAAAATCATTCAATAACTTCTTTCTTACATACTTTAGACTTTTTTCCAATAGCCCTTTTATGGTTAATTGCAAAACATGATATAATTCTTAAGAGAAAAGTACTTTCAAACCATACAAAAAGTGAATTGGAGAATACCAAGACCATACAAATAGGTAGGGTTAAAAAGTTATAGTTGTGTTATGGCAGAAATCTTCTTGGTGAGGACTTGGGTCCATTGAACTCAAAAGAGCTTGAGCAACTGGAGCGTCAGCTTGAGTCTTCTTTGAAGCAAGTTAGGTCCACTAAGGTATGTTTTAATGAATTCAAGCTCGACATACACTTTGTTTGATAACCATTATGGCTTCGTTGGATTCAGAACCATTGAATTTTTTTTTTTTTCTTTCTTTTTTATCATTGAGCTTATAAACACTATGTTCGCTTATAGTTTATTTGTTTTATTAATATCTAATAGTAAGGAGTATTTTTAAACTTGAAGTCAAGTTTTGAAAACAAAAGTTTTTGAGGATTTATTTTTTGTTTTGGAATTTTTATTAAGAATTCAAATGTCTACTTAGGAAAAATAAATAATATTATTAGAAAGTTATGAGAATATAATCACAATTTTCAGAAAACTAAAAACCAAAACCAAAACCTGATGTAGATTTCGTTTCTAGTTTTCCATCTTAGTCATAGCCTAAAAATAAAAACAAATTATTTAAAACTACTCTTTTTTTTTAGTTTTTAAAACTTTTCCTAGTTTTTGAAAACATTGGTTAAAAGTGGACAACAAAACAAATAAACTTATAGATAGAAGTATTGTTTATGAACTTAATTTACAAAAGCTAGAAACAAAAAATCGAATGGTAATCAAAGCGCTCTTCATATCTTTTTAAAAATAAACTTAGCCTATGAACACTAATTCCATCCGATATTTTTATTTACTTTATTAGCTACTTTTTAAAAATGTTTTAAAAAATATGACCTAATTCTTGATTATTTTTATTGAAAAAAGCTGGTTAGAAATTCAAATGTGTTAGCAATCCTATTTAATAGACCTAATTTTTTAGAAAAAGAAATATTTCAAAACAAAATTGCTAGCAATCAGATTCTAACCTAGAAAATTAGTTGTTTTCCCTCTCTTTTAAAGAGAGATGAGCTATGTAGATAGAAGAGAATAAAAAAATAATAATTATGTATTTTATAGGTTGTATACTTGCTGAAGAATCTTTGAGTATATTGATCAAATTTGATAGTTAAAGGATGGATTGATATTCAATGTTTCTTGTTCTTTGTTTCCAGCATTTAAGGAAATAGGTCTGTTCAGTTCATGCATGATTCTCATTCTTACCACTGTTTATAATTAACTTGTGTATAAATTCTAGAAAATAAATTTTTATTTCGCCAATCTTTCATTAGTTTTCAAATTACTTTCTTTGTATCTACAATATTTGAGAATTAGTGCTTACTTACCTAGAGAAACCTGAGATTTATGAATGTTAATCTTTTTCCATTTATAGATTATAGATTAAAAACAATGCATATTCAAAATCTACAGATTAAACATATGTTTTTGGACTTTTTAATTCAAATATTTGAACCTTTTGTTTTGTCTTTAAATTACAAGCCAAGATTAAAAGAAAAAATTAACCTCTTTTTTTTTTCTTTGAAATTAAATTCTTTCTTAATTATGGATATGACAATTTGATTAAAAGACTTGTTCTAAGTGATGGAGATGATTTGCGGCTTTATTTTTATATAATTAGTTCAACAATATGTGAAGTGAGAATTTGAATATTTGACCTCATATTCAATAGGTTATTCTGTTATGCTAGTTGAGCTAGCTATGTTGTTTTGTATATGTACTTTAATGATATATATTTGGATAATAATTATTTTTAAACCTTTAACACTCCAATATTTTATAGAAAATAGCTTTGGAAGTCTTTGGAGTACAAGTTCTCATGCTAACTTAGTGTTCTTAAAATTATTGTTTGAAATTAAGTGATTATCTATAGACAAAAATTGAAGACGAAGGCTTCTTTGATGACCATTTGATTTTTGGTTTTTGAAACTTAAACTTATAAAGTCTACTTGCATGCACCTATTGATTTCATTGTTTTGTTCTCTACATGTTAGGAGTGTTTTTAAAATCTAAGCTAGTCCATTCTTGAAATTTTAAGGCTTCATTTTTAATAACCATTTAGTTTTTAGTTTTCAAAAATTAAGCTTCTAAATGCTTTTTCTACCTATTGATTTCCTTGTTTGGCTATTTAATTTAGAGTGTTTTTAAAAACCAAGGTAAGTTTTGAAAACTAGAAAAAAGTAGTTTTTGTTTTTAAAATTTGGCTATGAATCAAGTGTTTAGCTAGAAAAGATGAAAAGTAGGACAAAGAAGTTGTAAGAAAACAAGTATAACCTTTAAAAATAGAAAACGAACTAGGTAATCAAACTGGACTTAAAAAATAGCTCTTAAAAACTTGTTTTTCTTTGTAGAATAATGTGGCCACAAATTCTATTGTTAAGCTTAGGAAAGTTGAAAACCATAATTAAGAAATTGGGAGAAAACAAGCATATTTTTTAAAAATTAAAAACAAAAAACTTAATAATTCCATTGTTATGTTAAGGTCGTTTGAGTCCAATAAACTTGTAATCTAACTATTAAGGTCCTACTTGGTAACTATGTGATTTTTTATTTATTGTTTGTGAACATTAAGTCTATAAAAACCGCTTCCATCTCTAAATTTCTTGCTTTGTTATCTACTTTTTACTAATGTTCTAAAAAACTAAGCTAAAATTGGAAAACTAAAAAGTGTAGGCCCTGTAAAGTAACCATTTTGTTTCTGGCTTTTGGTTTTTGAAAATTAAGCCTATTTCCTCCACATTTCTTACAATGATTTGCATCTTTCTTGAAATACAATGGTTGAATTCTTAGCCAAATCCCAAAACAAAAACAAGTTTTTAAAAGCTATTTTTTTTTAGTTTTCAAAATTTGGCTTGGTTTTTTTAAACCATTGGTAAAAACTAGACAACAAAGGAAGAAATTTGGAAGTGGAAGTAGTGTCTATAAGCTTAATTTTAAAAAACCAAAACCAAAAAACGAAATTGTTACCAAACGAAACCGTAGTTATTAAGAACATATTTTTATTTTTGATATTTGGCTAAGAATTCAATTGTTTTGCTTAAGAAAGATATAAATAAAAAAATATGTTTAATTTTCAAAAACCAAAAACCAAAAAATAAAACGGTTACCCTATAGATCAAAAAAATAATCTAAATTAATAAACCTATGAGCATTGAAAGTGAAAATAGAGGATCAAAATACATTTTCTTGTGTTTTCTTTTTTAATCTCGAAATCTAATTTCAGCATGAAAAAAGAGCCAATATGTTGAAAAAGGAACATTGTTGCGTTAAATGTTTTGCTTTTATTTTAATTCTTGAACTTGGTCTGCATGTCTTGTCCCTAACAGTATCTATGTGGCTGTGCTTTGTCTGTATCCATTCTTAAAAGACAATTATTGAAGCTTCACTACTTTCGTACTTTGAATATGGTTAACCAAAAGCTGCAGTTTACACCACCCACTTGTTCTGTTTCTTAATCAATATCCATTTAACTTCCACTTTTCTTGGTTTTTAACCAAAAGTTTTAAAGCTACAAAGTAAGTTCAAGACAGTCTTTTTAACTTATGGGAAATCTGGATTAAGATTATTGAAACTTGTAGTTTGTTTGTGTAACTTGTGTTTAGTTTATGAGCTTATTATAACTTCGAGCGTGGTTCTCCTTTTGTAATTATTTCTTGAGGTTGATTCTCTTTCTGTTTGAGCTCTTAATTATATAACTAGTTAGTTCAATTTTACCATGACTTCTTGAGCCTCTTTTTGGAGAAAAAAAAATTATTAAGCGAGATATTATCATGTAGTGTTCTCTCGTACTAACTATTGATCGTGGATTCTAAAATGTGCAAGTTCCTAATAAACACAATGGTCCAAAAATTGTCAGTCACATTGTAGCGGTCGACTAGTCCGACTAGTATTTTATTTCAGTAAAGGCCAATTTTTATTGTAATTTGTCAAATTATGACCAAATTGTGAAAAAAATTGGAACTTTGCAGACTCAGTACATGCTGGACCAGCTGTCTGATCTTCAGAACAAGGTTAGGGTTGACTTGATATGTAGTTTTAATGGTGAACTCGATCATTTTATTTTGTTGAATTGTCATTAATATATATATGATGAGTTTTTTGTATCTTTTGTCAAGTACAGGAACAAATGCTGATTGAAACCAACAGAGCTCTGCAAATAAAGGTAATCAATCAACCATTTTTAATTTCCATACACAACAAAAAGCTGACTTTAGTTTATTGATTCCCAAACTTTGGAACCAAAAAATCAGTACTCTTATGGAAGAATATTGAAGTTACCATTGTGTAACAATGGTATTTTCCTATATATTGTTAGGTCTACATTAGTGAGATTCTGTTTATAATTTTGCGTTTCTTGTCGATGTCGAACTTATAGAGGACATGTTGATAAAAATGTAAGATAATGTTGAATAAATTGAAGAGGCAAAACTAAAAATGGTTATGAAACTGTGTGTTGGTATGTGGAATTGGTTGATCAGCTGGAAGAAATAAGTTCAAGAAATAACATAAGGCTTACATGGGAAGGTGGAGACCAAAGTATGTCATATGGTCCACAAAATGCCCAAACTCAAGGCTTCTTTCAGCCACTAGATTGCAATCCCACTTTGCAAATTGGGTGAGATTTTATTATTATCATTATTTTTTTAAGAGCAAATATTCTTTTTCCCTTTTTTCTTTTGGGGTAATTTGGTCATTTTTTGTGTTGGGTTTTAATTAGGTACACTTCTGCAGTATCAGACCAAATTACAAGCACCACTGCTCCAACTCATGCCCAACAAGTCAATGGCTTCCTCCCTGGTTGGATGCTTTGAAGACCAAAAAAAACTACCTCTCCTTTTTCTACTTTTGTTGCTTACTTTTTTTTCTTTTTTCTTTTTGCACTATGCTACCAATACTATGCAAAATGTTAATAAGCATTATATTTTACTTTTCATTTTAGAACTTGAAAGAAAATCCCAAAATTTGAACCACTTGTATTGAGAACCTATCATATTTACTTGTATCTTTTCAAATTTTAAGACTCTTTGAATTTTGAATTGTTTTCTTTTCTTTTTCCCTTTTTTTTTTCCTATCTGTTTTGTGTTTTGTGTGCTTTGAACATTGAGAATTGCAAGTGAAGTTTATGTCTTTTGAAGGAGATTCTTTATCTATTGAGGGGTATTTTCTACACATGTTGGTGACAGACAGACTCTTATATGTTCTTGGAGAAAATAAGAATATGAACTAGATCCTAGAATAT

mRNA sequence

AAAAAAAAAAAGAAAGAAAGAGGGAAATTAAAAGAGAAGGGGAGATTTAGGGTAAAAAATTGAAAGGGGGGGTTTAAAAAAGAAAGAAAAAAAATGGGAAGAGGAAGAGTAGAGTTGAAGAGGATAGAGAACAAGATAAACAGGCAAGTAACATTTGCAAAGAGAAGAAATGGGCTTTTGAAGAAGGCTTATGAACTTTCTGTTCTTTGTGATGCCGAAGTTGCTCTCATCATCTTCTCCAATCGTGGCAAGCTCTATGAGTTCTGTAGTACTTCCAACATGCTCAAAACACTGGAGAGGTACCAAAAATGCAGTTATGGAGCGGTGGAGGTCACAAAACCGGCCAAAGAACTCGAGAGTAGCTATAGAGAATACTTGAAGCTGAAGGCTAGGTTTGAGTCTTTACAAAGAACTCAGAGAAATCTTCTTGGTGAGGACTTGGGTCCATTGAACTCAAAAGAGCTTGAGCAACTGGAGCGTCAGCTTGAGTCTTCTTTGAAGCAAGTTAGGTCCACTAAGACTCAGTACATGCTGGACCAGCTGTCTGATCTTCAGAACAAGGAACAAATGCTGATTGAAACCAACAGAGCTCTGCAAATAAAGCTGGAAGAAATAAGTTCAAGAAATAACATAAGGCTTACATGGGAAGGTGGAGACCAAAGTATGTCATATGGTCCACAAAATGCCCAAACTCAAGGCTTCTTTCAGCCACTAGATTGCAATCCCACTTTGCAAATTGGGTACACTTCTGCAGTATCAGACCAAATTACAAGCACCACTGCTCCAACTCATGCCCAACAAGTCAATGGCTTCCTCCCTGGTTGGATGCTTTGAAGACCAAAAAAAACTACCTCTCCTTTTTCTACTTTTGTTGCTTACTTTTTTTTCTTTTTTCTTTTTGCACTATGCTACCAATACTATGCAAAATGTTAATAAGCATTATATTTTACTTTTCATTTTAGAACTTGAAAGAAAATCCCAAAATTTGAACCACTTGTATTGAGAACCTATCATATTTACTTGTATCTTTTCAAATTTTAAGACTCTTTGAATTTTGAATTGTTTTCTTTTCTTTTTCCCTTTTTTTTTTCCTATCTGTTTTGTGTTTTGTGTGCTTTGAACATTGAGAATTGCAAGTGAAGTTTATGTCTTTTGAAGGAGATTCTTTATCTATTGAGGGGTATTTTCTACACATGTTGGTGACAGACAGACTCTTATATGTTCTTGGAGAAAATAAGAATATGAACTAGATCCTAGAATAT

Coding sequence (CDS)

ATGGGAAGAGGAAGAGTAGAGTTGAAGAGGATAGAGAACAAGATAAACAGGCAAGTAACATTTGCAAAGAGAAGAAATGGGCTTTTGAAGAAGGCTTATGAACTTTCTGTTCTTTGTGATGCCGAAGTTGCTCTCATCATCTTCTCCAATCGTGGCAAGCTCTATGAGTTCTGTAGTACTTCCAACATGCTCAAAACACTGGAGAGGTACCAAAAATGCAGTTATGGAGCGGTGGAGGTCACAAAACCGGCCAAAGAACTCGAGAGTAGCTATAGAGAATACTTGAAGCTGAAGGCTAGGTTTGAGTCTTTACAAAGAACTCAGAGAAATCTTCTTGGTGAGGACTTGGGTCCATTGAACTCAAAAGAGCTTGAGCAACTGGAGCGTCAGCTTGAGTCTTCTTTGAAGCAAGTTAGGTCCACTAAGACTCAGTACATGCTGGACCAGCTGTCTGATCTTCAGAACAAGGAACAAATGCTGATTGAAACCAACAGAGCTCTGCAAATAAAGCTGGAAGAAATAAGTTCAAGAAATAACATAAGGCTTACATGGGAAGGTGGAGACCAAAGTATGTCATATGGTCCACAAAATGCCCAAACTCAAGGCTTCTTTCAGCCACTAGATTGCAATCCCACTTTGCAAATTGGGTACACTTCTGCAGTATCAGACCAAATTACAAGCACCACTGCTCCAACTCATGCCCAACAAGTCAATGGCTTCCTCCCTGGTTGGATGCTTTGA

Protein sequence

MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTSNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKARFESLQRTQRNLLGEDLGPLNSKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRALQIKLEEISSRNNIRLTWEGGDQSMSYGPQNAQTQGFFQPLDCNPTLQIGYTSAVSDQITSTTAPTHAQQVNGFLPGWML

Homology

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BLAST of CaUC07G139600 vs. NCBI nr
Match: XP_038877181.1 (agamous-like MADS-box protein MADS2 isoform X2 [Benincasa hispida])

HSP 1 Score: 470.7 bits (1210), Expect = 7.7e-129
Identity = 243/246 (98.78%), Postives = 244/246 (99.19%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60
           MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS 
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSI 60

Query: 61  SNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKARFESLQRTQRNLLGEDLGPLN 120
           SNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKARFE+LQRTQRNLLGEDLGPLN
Sbjct: 61  SNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKARFETLQRTQRNLLGEDLGPLN 120

Query: 121 SKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRALQIKLEEISSRNNI 180
           SKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRALQIKLEEISSRNNI
Sbjct: 121 SKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRALQIKLEEISSRNNI 180

Query: 181 RLTWEGGDQSMSYGPQNAQTQGFFQPLDCNPTLQIGYTSAVSDQITSTTAPTHAQQVNGF 240
           RLTWEGGDQSMSYGPQNAQTQGFFQPLDCNPTLQIGYTSAVSDQITSTTAPTH QQVNGF
Sbjct: 181 RLTWEGGDQSMSYGPQNAQTQGFFQPLDCNPTLQIGYTSAVSDQITSTTAPTHGQQVNGF 240

Query: 241 LPGWML 247
           LPGWML
Sbjct: 241 LPGWML 246

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BLAST of CaUC07G139600 vs. NCBI nr
Match: NP_001267667.1 (developmental protein SEPALLATA 2-like [Cucumis sativus] >AAF23363.1 CAGL2 [Cucumis sativus] >KAE8649327.1 hypothetical protein Csa_015352 [Cucumis sativus])

HSP 1 Score: 467.6 bits (1202), Expect = 6.5e-128
Identity = 241/246 (97.97%), Postives = 244/246 (99.19%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60
           MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60

Query: 61  SNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKARFESLQRTQRNLLGEDLGPLN 120
           SNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLK+RFESLQRTQRNLLGEDLGPLN
Sbjct: 61  SNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKSRFESLQRTQRNLLGEDLGPLN 120

Query: 121 SKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRALQIKLEEISSRNNI 180
           SKELEQLERQL SSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRALQIKLEEISSRNNI
Sbjct: 121 SKELEQLERQLVSSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRALQIKLEEISSRNNI 180

Query: 181 RLTWEGGDQSMSYGPQNAQTQGFFQPLDCNPTLQIGYTSAVSDQITSTTAPTHAQQVNGF 240
           RLTW+GGDQSMSYGPQNAQTQGFFQPL+CNPTLQIGYTSAVSDQITSTT PTHAQQVNGF
Sbjct: 181 RLTWDGGDQSMSYGPQNAQTQGFFQPLECNPTLQIGYTSAVSDQITSTTTPTHAQQVNGF 240

Query: 241 LPGWML 247
           LPGWML
Sbjct: 241 LPGWML 246

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BLAST of CaUC07G139600 vs. NCBI nr
Match: XP_022155022.1 (developmental protein SEPALLATA 1 [Momordica charantia])

HSP 1 Score: 465.3 bits (1196), Expect = 3.2e-127
Identity = 238/246 (96.75%), Postives = 245/246 (99.59%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60
           MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60

Query: 61  SNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKARFESLQRTQRNLLGEDLGPLN 120
           SNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLK+RFESLQRTQRNLLGEDLGPLN
Sbjct: 61  SNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKSRFESLQRTQRNLLGEDLGPLN 120

Query: 121 SKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRALQIKLEEISSRNNI 180
           SKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRAL +KLEEISSRNNI
Sbjct: 121 SKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRALTLKLEEISSRNNI 180

Query: 181 RLTWEGGDQSMSYGPQNAQTQGFFQPLDCNPTLQIGYTSAVSDQITSTTAPTHAQQVNGF 240
           RLTW+GGDQSMSYGPQNAQTQGFFQPLDCNPTLQIGYT+AVSDQ+T++TAPTHAQQVNGF
Sbjct: 181 RLTWDGGDQSMSYGPQNAQTQGFFQPLDCNPTLQIGYTAAVSDQMTASTAPTHAQQVNGF 240

Query: 241 LPGWML 247
           LPGWML
Sbjct: 241 LPGWML 246

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BLAST of CaUC07G139600 vs. NCBI nr
Match: KAG7018196.1 (Developmental protein SEPALLATA 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 462.6 bits (1189), Expect = 2.1e-126
Identity = 240/246 (97.56%), Postives = 242/246 (98.37%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60
           MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST
Sbjct: 57  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 116

Query: 61  SNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKARFESLQRTQRNLLGEDLGPLN 120
           SNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKARFESLQ TQRNLLGEDLGPLN
Sbjct: 117 SNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKARFESLQTTQRNLLGEDLGPLN 176

Query: 121 SKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRALQIKLEEISSRNNI 180
           SKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRALQIKLEEISSRNNI
Sbjct: 177 SKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRALQIKLEEISSRNNI 236

Query: 181 RLTWEGGDQSMSYGPQNAQTQGFFQPLDCNPTLQIGYTSAVSDQITSTTAPTHAQQVNGF 240
           RLTWE GDQSMSY PQ+AQTQGFFQ LDCNPTLQIGYTSAVSDQIT+TTAPTHAQQVNGF
Sbjct: 237 RLTWEAGDQSMSYAPQDAQTQGFFQALDCNPTLQIGYTSAVSDQITATTAPTHAQQVNGF 296

Query: 241 LPGWML 247
           LPGWML
Sbjct: 297 LPGWML 302

[Close]

BLAST of CaUC07G139600 vs. NCBI nr
Match: XP_022955902.1 (developmental protein SEPALLATA 1 isoform X2 [Cucurbita moschata] >XP_022980708.1 developmental protein SEPALLATA 1 isoform X2 [Cucurbita maxima])

HSP 1 Score: 462.6 bits (1189), Expect = 2.1e-126
Identity = 240/246 (97.56%), Postives = 242/246 (98.37%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60
           MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60

Query: 61  SNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKARFESLQRTQRNLLGEDLGPLN 120
           SNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKARFESLQ TQRNLLGEDLGPLN
Sbjct: 61  SNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKARFESLQTTQRNLLGEDLGPLN 120

Query: 121 SKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRALQIKLEEISSRNNI 180
           SKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRALQIKLEEISSRNNI
Sbjct: 121 SKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRALQIKLEEISSRNNI 180

Query: 181 RLTWEGGDQSMSYGPQNAQTQGFFQPLDCNPTLQIGYTSAVSDQITSTTAPTHAQQVNGF 240
           RLTWE GDQSMSY PQ+AQTQGFFQ LDCNPTLQIGYTSAVSDQIT+TTAPTHAQQVNGF
Sbjct: 181 RLTWEAGDQSMSYAPQDAQTQGFFQALDCNPTLQIGYTSAVSDQITATTAPTHAQQVNGF 240

Query: 241 LPGWML 247
           LPGWML
Sbjct: 241 LPGWML 246

[Close]

BLAST of CaUC07G139600 vs. ExPASy Swiss-Prot
Match: Q8LLR2 (Agamous-like MADS-box protein MADS2 OS=Vitis vinifera OX=29760 GN=MADS2 PE=2 SV=2)

HSP 1 Score: 392.1 bits (1006), Expect = 4.6e-108
Identity = 202/247 (81.78%), Postives = 230/247 (93.12%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60
           MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFS RGKLYEFCS+
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGKLYEFCSS 60

Query: 61  SNMLKTLERYQKCSYGAVEVTKPAKELE-SSYREYLKLKARFESLQRTQRNLLGEDLGPL 120
           S+MLKTLERYQKCSYGAVEV++P+KELE SSYREYLKLK++FESLQRTQRNLLGEDLGPL
Sbjct: 61  SSMLKTLERYQKCSYGAVEVSRPSKELEQSSYREYLKLKSKFESLQRTQRNLLGEDLGPL 120

Query: 121 NSKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRALQIKLEEISSRNN 180
           N+KELEQLERQLE+SLKQVRSTKTQ+MLDQLSDLQNKEQ+L+E+N+AL  KL+EIS +N+
Sbjct: 121 NTKELEQLERQLETSLKQVRSTKTQFMLDQLSDLQNKEQVLVESNKALTRKLDEISVKNH 180

Query: 181 IRLTWEGGDQSMSYGPQNAQTQGFFQPLDCNPTLQIGYTSAVSDQITSTTAPTHAQQVNG 240
           ++L+WE G+QSM YG Q AQ+QGFFQPL+CNPTLQIGY  A S Q+   +AP++AQ VNG
Sbjct: 181 LQLSWESGEQSMPYGHQQAQSQGFFQPLECNPTLQIGYNPAGSSQL---SAPSNAQNVNG 240

Query: 241 FLPGWML 247
           F+PGWML
Sbjct: 241 FIPGWML 244

[Close]

BLAST of CaUC07G139600 vs. ExPASy Swiss-Prot
Match: P29382 (Developmental protein SEPALLATA 1 OS=Arabidopsis thaliana OX=3702 GN=SEP1 PE=1 SV=2)

HSP 1 Score: 365.2 bits (936), Expect = 6.0e-100
Identity = 193/252 (76.59%), Postives = 221/252 (87.70%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60
           MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS+
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  SNMLKTLERYQKCSYGAVEV-TKPAKELESSYREYLKLKARFESLQRTQRNLLGEDLGPL 120
           SNMLKTL+RYQKCSYG++EV  KPAKELE+SYREYLKLK R+E+LQR QRNLLGEDLGPL
Sbjct: 61  SNMLKTLDRYQKCSYGSIEVNNKPAKELENSYREYLKLKGRYENLQRQQRNLLGEDLGPL 120

Query: 121 NSKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRALQIKLEEISSRNN 180
           NSKELEQLERQL+ SLKQVRS KTQYMLDQLSDLQNKEQML+ETNRAL +KL+++    +
Sbjct: 121 NSKELEQLERQLDGSLKQVRSIKTQYMLDQLSDLQNKEQMLLETNRALAMKLDDMIGVRS 180

Query: 181 IRL----TWEGGDQSMSYGPQNAQTQGFFQPLDCNPTLQIGYTSAV-SDQITSTTAPTHA 240
             +     WEGG+Q+++Y    AQ+QG +QPL+CNPTLQ+GY + V S+QIT+TT    A
Sbjct: 181 HHMGGGGGWEGGEQNVTYAHHQAQSQGLYQPLECNPTLQMGYDNPVCSEQITATT-QAQA 240

Query: 241 QQVNGFLPGWML 247
           QQ NG++PGWML
Sbjct: 241 QQGNGYIPGWML 251

[Close]

BLAST of CaUC07G139600 vs. ExPASy Swiss-Prot
Match: P29384 (Developmental protein SEPALLATA 2 OS=Arabidopsis thaliana OX=3702 GN=SEP2 PE=1 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 5.8e-95
Identity = 183/250 (73.20%), Postives = 212/250 (84.80%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60
           MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEV+LI+FSNRGKLYEFCST
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVSLIVFSNRGKLYEFCST 60

Query: 61  SNMLKTLERYQKCSYGAVEV-TKPAKELESSYREYLKLKARFESLQRTQRNLLGEDLGPL 120
           SNMLKTLERYQKCSYG++EV  KPAKELE+SYREYLKLK R+E+LQR QRNLLGEDLGPL
Sbjct: 61  SNMLKTLERYQKCSYGSIEVNNKPAKELENSYREYLKLKGRYENLQRQQRNLLGEDLGPL 120

Query: 121 NSKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRALQIKLEEISS--R 180
           NSKELEQLERQL+ SLKQVR  KTQYMLDQLSDLQ KE +L++ NRAL +KLE++     
Sbjct: 121 NSKELEQLERQLDGSLKQVRCIKTQYMLDQLSDLQGKEHILLDANRALSMKLEDMIGVRH 180

Query: 181 NNIRLTWEGGD-QSMSYGPQNAQTQGFFQPLDCNPTLQIGYTSAVSDQITSTTAPTHAQQ 240
           ++I   WEGGD Q+++YG   A +QG +Q L+C+PTLQIGY+  V  +  + T    +QQ
Sbjct: 181 HHIGGGWEGGDQQNIAYGHPQAHSQGLYQSLECDPTLQIGYSHPVCSEQMAVTVQGQSQQ 240

Query: 241 VNGFLPGWML 247
            NG++PGWML
Sbjct: 241 GNGYIPGWML 250

[Close]

BLAST of CaUC07G139600 vs. ExPASy Swiss-Prot
Match: Q8LLR0 (Agamous-like MADS-box protein MADS4 OS=Vitis vinifera OX=29760 GN=MADS4 PE=2 SV=2)

HSP 1 Score: 304.7 bits (779), Expect = 9.6e-82
Identity = 173/250 (69.20%), Postives = 197/250 (78.80%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60
           MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS+
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  SNMLKTLERYQKCSYGAVEV---TKPAKELESSYREYLKLKARFESLQRTQRNLLGEDLG 120
           S+MLKTLERYQKC+YGA E    T+ A EL SS +EYLKLKAR+E+LQR+QRNLLGEDLG
Sbjct: 61  SSMLKTLERYQKCNYGAPETNVSTREALEL-SSQQEYLKLKARYEALQRSQRNLLGEDLG 120

Query: 121 PLNSKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRALQIKLEEISSR 180
           PL++KELE LERQL+ SLKQ+RST+TQYMLDQL+DLQ KE ML E N+ L+ +L E +  
Sbjct: 121 PLSTKELESLERQLDVSLKQIRSTRTQYMLDQLTDLQRKEHMLNEANKTLKQRLLEGTQV 180

Query: 181 NNIRLTWEGGDQSMSYGPQNAQTQ--GFFQPLDCNPTLQIGYTSAVSDQITSTTAPTHAQ 240
           N  +L W    Q + YG Q AQ Q  GFF PL+C PTLQIGY     D IT   A     
Sbjct: 181 N--QLQWNPNAQDVGYGRQQAQPQGDGFFHPLECEPTLQIGYQ---PDPITVAAA---GP 240

Query: 241 QVNGFLPGWM 246
            VN ++PGW+
Sbjct: 241 SVNNYMPGWL 241

[Close]

BLAST of CaUC07G139600 vs. ExPASy Swiss-Prot
Match: Q39685 (MADS-box protein CMB1 OS=Dianthus caryophyllus OX=3570 GN=CMB1 PE=2 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 3.7e-81
Identity = 167/248 (67.34%), Postives = 195/248 (78.63%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60
           MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALI+FSNRGKLYEFCST
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLYEFCST 60

Query: 61  SNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKARFESLQRTQRNLLGEDLGPLN 120
           S M KTLERYQ+CSYG++E ++P+KE ESSY+EYLKLKA+ + LQR+ RNLLGEDLG L+
Sbjct: 61  SCMNKTLERYQRCSYGSLETSQPSKETESSYQEYLKLKAKVDVLQRSHRNLLGEDLGELS 120

Query: 121 SKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRALQIKLEEISSRNNI 180
           +KELEQLE QL+ SL+Q+RS KTQ+MLDQL+DLQ KE+ML E+NRAL+ KLEE  S  + 
Sbjct: 121 TKELEQLEHQLDKSLRQIRSIKTQHMLDQLADLQKKEEMLFESNRALKTKLEE--SCASF 180

Query: 181 RLTWEGGDQSMSYGPQNAQTQGFFQ--PLDCNPTLQIGYTSAVSDQITSTTAPTHAQQVN 240
           R  W+                GFF+  PL CN  LQIGY  A  DQ+ +TT+   AQ V+
Sbjct: 181 RPNWD----------VRQPGDGFFEPLPLPCNNNLQIGYNEATQDQMNATTS---AQNVH 233

Query: 241 GFLPGWML 247
           GF  GWML
Sbjct: 241 GFAQGWML 233

[Close]

BLAST of CaUC07G139600 vs. ExPASy TrEMBL
Match: Q9SEG4 (CAGL2 OS=Cucumis sativus OX=3659 GN=CAGL2 PE=2 SV=1)

HSP 1 Score: 467.6 bits (1202), Expect = 3.2e-128
Identity = 241/246 (97.97%), Postives = 244/246 (99.19%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60
           MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60

Query: 61  SNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKARFESLQRTQRNLLGEDLGPLN 120
           SNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLK+RFESLQRTQRNLLGEDLGPLN
Sbjct: 61  SNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKSRFESLQRTQRNLLGEDLGPLN 120

Query: 121 SKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRALQIKLEEISSRNNI 180
           SKELEQLERQL SSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRALQIKLEEISSRNNI
Sbjct: 121 SKELEQLERQLVSSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRALQIKLEEISSRNNI 180

Query: 181 RLTWEGGDQSMSYGPQNAQTQGFFQPLDCNPTLQIGYTSAVSDQITSTTAPTHAQQVNGF 240
           RLTW+GGDQSMSYGPQNAQTQGFFQPL+CNPTLQIGYTSAVSDQITSTT PTHAQQVNGF
Sbjct: 181 RLTWDGGDQSMSYGPQNAQTQGFFQPLECNPTLQIGYTSAVSDQITSTTTPTHAQQVNGF 240

Query: 241 LPGWML 247
           LPGWML
Sbjct: 241 LPGWML 246

[Close]

BLAST of CaUC07G139600 vs. ExPASy TrEMBL
Match: A0A6J1DN93 (developmental protein SEPALLATA 1 OS=Momordica charantia OX=3673 GN=LOC111022168 PE=4 SV=1)

HSP 1 Score: 465.3 bits (1196), Expect = 1.6e-127
Identity = 238/246 (96.75%), Postives = 245/246 (99.59%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60
           MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60

Query: 61  SNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKARFESLQRTQRNLLGEDLGPLN 120
           SNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLK+RFESLQRTQRNLLGEDLGPLN
Sbjct: 61  SNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKSRFESLQRTQRNLLGEDLGPLN 120

Query: 121 SKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRALQIKLEEISSRNNI 180
           SKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRAL +KLEEISSRNNI
Sbjct: 121 SKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRALTLKLEEISSRNNI 180

Query: 181 RLTWEGGDQSMSYGPQNAQTQGFFQPLDCNPTLQIGYTSAVSDQITSTTAPTHAQQVNGF 240
           RLTW+GGDQSMSYGPQNAQTQGFFQPLDCNPTLQIGYT+AVSDQ+T++TAPTHAQQVNGF
Sbjct: 181 RLTWDGGDQSMSYGPQNAQTQGFFQPLDCNPTLQIGYTAAVSDQMTASTAPTHAQQVNGF 240

Query: 241 LPGWML 247
           LPGWML
Sbjct: 241 LPGWML 246

[Close]

BLAST of CaUC07G139600 vs. ExPASy TrEMBL
Match: A0A6J1J038 (developmental protein SEPALLATA 1 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111479996 PE=4 SV=1)

HSP 1 Score: 462.6 bits (1189), Expect = 1.0e-126
Identity = 240/246 (97.56%), Postives = 242/246 (98.37%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60
           MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60

Query: 61  SNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKARFESLQRTQRNLLGEDLGPLN 120
           SNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKARFESLQ TQRNLLGEDLGPLN
Sbjct: 61  SNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKARFESLQTTQRNLLGEDLGPLN 120

Query: 121 SKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRALQIKLEEISSRNNI 180
           SKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRALQIKLEEISSRNNI
Sbjct: 121 SKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRALQIKLEEISSRNNI 180

Query: 181 RLTWEGGDQSMSYGPQNAQTQGFFQPLDCNPTLQIGYTSAVSDQITSTTAPTHAQQVNGF 240
           RLTWE GDQSMSY PQ+AQTQGFFQ LDCNPTLQIGYTSAVSDQIT+TTAPTHAQQVNGF
Sbjct: 181 RLTWEAGDQSMSYAPQDAQTQGFFQALDCNPTLQIGYTSAVSDQITATTAPTHAQQVNGF 240

Query: 241 LPGWML 247
           LPGWML
Sbjct: 241 LPGWML 246

[Close]

BLAST of CaUC07G139600 vs. ExPASy TrEMBL
Match: A0A6J1GUW6 (developmental protein SEPALLATA 1 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111457748 PE=4 SV=1)

HSP 1 Score: 462.6 bits (1189), Expect = 1.0e-126
Identity = 240/246 (97.56%), Postives = 242/246 (98.37%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60
           MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60

Query: 61  SNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKARFESLQRTQRNLLGEDLGPLN 120
           SNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKARFESLQ TQRNLLGEDLGPLN
Sbjct: 61  SNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKARFESLQTTQRNLLGEDLGPLN 120

Query: 121 SKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRALQIKLEEISSRNNI 180
           SKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRALQIKLEEISSRNNI
Sbjct: 121 SKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRALQIKLEEISSRNNI 180

Query: 181 RLTWEGGDQSMSYGPQNAQTQGFFQPLDCNPTLQIGYTSAVSDQITSTTAPTHAQQVNGF 240
           RLTWE GDQSMSY PQ+AQTQGFFQ LDCNPTLQIGYTSAVSDQIT+TTAPTHAQQVNGF
Sbjct: 181 RLTWEAGDQSMSYAPQDAQTQGFFQALDCNPTLQIGYTSAVSDQITATTAPTHAQQVNGF 240

Query: 241 LPGWML 247
           LPGWML
Sbjct: 241 LPGWML 246

[Close]

BLAST of CaUC07G139600 vs. ExPASy TrEMBL
Match: A0A1S3CLU0 (developmental protein SEPALLATA 1 OS=Cucumis melo OX=3656 GN=LOC103502415 PE=4 SV=1)

HSP 1 Score: 458.4 bits (1178), Expect = 1.9e-125
Identity = 237/246 (96.34%), Postives = 241/246 (97.97%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60
           MGRG VELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST
Sbjct: 1   MGRGIVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60

Query: 61  SNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKARFESLQRTQRNLLGEDLGPLN 120
           SNMLKTLERYQKCSYGAVEVTKPAKELESSYREY+KLK+RFESLQRTQRNLLGEDLGPLN
Sbjct: 61  SNMLKTLERYQKCSYGAVEVTKPAKELESSYREYVKLKSRFESLQRTQRNLLGEDLGPLN 120

Query: 121 SKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRALQIKLEEISSRNNI 180
           SKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRALQ+KLEEISSRNNI
Sbjct: 121 SKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRALQMKLEEISSRNNI 180

Query: 181 RLTWEGGDQSMSYGPQNAQTQGFFQPLDCNPTLQIGYTSAVSDQITSTTAPTHAQQVNGF 240
           R  W+GGDQSMSYG QNAQTQGFFQPLDCNPTLQIGYTSAVSDQITSTT PTHAQQVNGF
Sbjct: 181 RHPWDGGDQSMSYGTQNAQTQGFFQPLDCNPTLQIGYTSAVSDQITSTTTPTHAQQVNGF 240

Query: 241 LPGWML 247
           LPGWML
Sbjct: 241 LPGWML 246

[Close]

BLAST of CaUC07G139600 vs. TAIR 10
Match: AT5G15800.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 365.2 bits (936), Expect = 4.3e-101
Identity = 193/252 (76.59%), Postives = 221/252 (87.70%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60
           MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS+
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  SNMLKTLERYQKCSYGAVEV-TKPAKELESSYREYLKLKARFESLQRTQRNLLGEDLGPL 120
           SNMLKTL+RYQKCSYG++EV  KPAKELE+SYREYLKLK R+E+LQR QRNLLGEDLGPL
Sbjct: 61  SNMLKTLDRYQKCSYGSIEVNNKPAKELENSYREYLKLKGRYENLQRQQRNLLGEDLGPL 120

Query: 121 NSKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRALQIKLEEISSRNN 180
           NSKELEQLERQL+ SLKQVRS KTQYMLDQLSDLQNKEQML+ETNRAL +KL+++    +
Sbjct: 121 NSKELEQLERQLDGSLKQVRSIKTQYMLDQLSDLQNKEQMLLETNRALAMKLDDMIGVRS 180

Query: 181 IRL----TWEGGDQSMSYGPQNAQTQGFFQPLDCNPTLQIGYTSAV-SDQITSTTAPTHA 240
             +     WEGG+Q+++Y    AQ+QG +QPL+CNPTLQ+GY + V S+QIT+TT    A
Sbjct: 181 HHMGGGGGWEGGEQNVTYAHHQAQSQGLYQPLECNPTLQMGYDNPVCSEQITATT-QAQA 240

Query: 241 QQVNGFLPGWML 247
           QQ NG++PGWML
Sbjct: 241 QQGNGYIPGWML 251

[Close]

BLAST of CaUC07G139600 vs. TAIR 10
Match: AT5G15800.2 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 356.7 bits (914), Expect = 1.5e-98
Identity = 193/263 (73.38%), Postives = 221/263 (84.03%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60
           MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS+
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  SNMLKTLERYQKCSYGAVEV-TKPAKELESSYREYLKLKARFESLQRTQRNLLGEDLGPL 120
           SNMLKTL+RYQKCSYG++EV  KPAKELE+SYREYLKLK R+E+LQR QRNLLGEDLGPL
Sbjct: 61  SNMLKTLDRYQKCSYGSIEVNNKPAKELENSYREYLKLKGRYENLQRQQRNLLGEDLGPL 120

Query: 121 NSKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRALQIKLEEISSRNN 180
           NSKELEQLERQL+ SLKQVRS KTQYMLDQLSDLQNKEQML+ETNRAL +KL+++    +
Sbjct: 121 NSKELEQLERQLDGSLKQVRSIKTQYMLDQLSDLQNKEQMLLETNRALAMKLDDMIGVRS 180

Query: 181 IRL----TWEGGDQSMSYGPQNAQTQGFFQPLDCNPTLQIG-----------YTSAV-SD 240
             +     WEGG+Q+++Y    AQ+QG +QPL+CNPTLQ+G           Y + V S+
Sbjct: 181 HHMGGGGGWEGGEQNVTYAHHQAQSQGLYQPLECNPTLQMGCCFGDDDDDDRYDNPVCSE 240

Query: 241 QITSTTAPTHAQQVNGFLPGWML 247
           QIT+TT    AQQ NG++PGWML
Sbjct: 241 QITATT-QAQAQQGNGYIPGWML 262

[Close]

BLAST of CaUC07G139600 vs. TAIR 10
Match: AT3G02310.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 348.6 bits (893), Expect = 4.1e-96
Identity = 183/250 (73.20%), Postives = 212/250 (84.80%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60
           MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEV+LI+FSNRGKLYEFCST
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVSLIVFSNRGKLYEFCST 60

Query: 61  SNMLKTLERYQKCSYGAVEV-TKPAKELESSYREYLKLKARFESLQRTQRNLLGEDLGPL 120
           SNMLKTLERYQKCSYG++EV  KPAKELE+SYREYLKLK R+E+LQR QRNLLGEDLGPL
Sbjct: 61  SNMLKTLERYQKCSYGSIEVNNKPAKELENSYREYLKLKGRYENLQRQQRNLLGEDLGPL 120

Query: 121 NSKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRALQIKLEEISS--R 180
           NSKELEQLERQL+ SLKQVR  KTQYMLDQLSDLQ KE +L++ NRAL +KLE++     
Sbjct: 121 NSKELEQLERQLDGSLKQVRCIKTQYMLDQLSDLQGKEHILLDANRALSMKLEDMIGVRH 180

Query: 181 NNIRLTWEGGD-QSMSYGPQNAQTQGFFQPLDCNPTLQIGYTSAVSDQITSTTAPTHAQQ 240
           ++I   WEGGD Q+++YG   A +QG +Q L+C+PTLQIGY+  V  +  + T    +QQ
Sbjct: 181 HHIGGGWEGGDQQNIAYGHPQAHSQGLYQSLECDPTLQIGYSHPVCSEQMAVTVQGQSQQ 240

Query: 241 VNGFLPGWML 247
            NG++PGWML
Sbjct: 241 GNGYIPGWML 250

[Close]

BLAST of CaUC07G139600 vs. TAIR 10
Match: AT1G24260.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 278.5 bits (711), Expect = 5.2e-75
Identity = 158/252 (62.70%), Postives = 194/252 (76.98%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60
           MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS+
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  SNMLKTLERYQKCSYGAVEVTKPAKEL---ESSYREYLKLKARFESLQRTQRNLLGEDLG 120
           S+ML+TLERYQKC+YGA E   P++E     SS +EYLKLK R+++LQRTQRNLLGEDLG
Sbjct: 61  SSMLRTLERYQKCNYGAPEPNVPSREALAELSSQQEYLKLKERYDALQRTQRNLLGEDLG 120

Query: 121 PLNSKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRALQIKLEEISSR 180
           PL++KELE LERQL+SSLKQ+R+ +TQ+MLDQL+DLQ+KE+ML ETN+ L+++L +   +
Sbjct: 121 PLSTKELESLERQLDSSLKQIRALRTQFMLDQLNDLQSKERMLTETNKTLRLRLAD-GYQ 180

Query: 181 NNIRLTWEGGDQSMSYG----PQNAQTQGFFQPLDCNPTLQIGYTSAVSDQITSTTAPTH 240
             ++L     ++   YG     Q   +Q FFQPL+C P LQIGY      Q      P+ 
Sbjct: 181 MPLQLN-PNQEEVDHYGRHHHQQQQHSQAFFQPLECEPILQIGYQ---GQQDGMGAGPS- 240

Query: 241 AQQVNGFLPGWM 246
              VN ++ GW+
Sbjct: 241 ---VNNYMLGWL 243

[Close]

BLAST of CaUC07G139600 vs. TAIR 10
Match: AT1G24260.2 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 278.1 bits (710), Expect = 6.8e-75
Identity = 158/253 (62.45%), Postives = 194/253 (76.68%), Query Frame = 0


Query: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST 60
           MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS+
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  SNMLKTLERYQKCSYGAVEVTKPAKEL----ESSYREYLKLKARFESLQRTQRNLLGEDL 120
           S+ML+TLERYQKC+YGA E   P++E      SS +EYLKLK R+++LQRTQRNLLGEDL
Sbjct: 61  SSMLRTLERYQKCNYGAPEPNVPSREALAVELSSQQEYLKLKERYDALQRTQRNLLGEDL 120

Query: 121 GPLNSKELEQLERQLESSLKQVRSTKTQYMLDQLSDLQNKEQMLIETNRALQIKLEEISS 180
           GPL++KELE LERQL+SSLKQ+R+ +TQ+MLDQL+DLQ+KE+ML ETN+ L+++L +   
Sbjct: 121 GPLSTKELESLERQLDSSLKQIRALRTQFMLDQLNDLQSKERMLTETNKTLRLRLAD-GY 180

Query: 181 RNNIRLTWEGGDQSMSYG----PQNAQTQGFFQPLDCNPTLQIGYTSAVSDQITSTTAPT 240
           +  ++L     ++   YG     Q   +Q FFQPL+C P LQIGY      Q      P+
Sbjct: 181 QMPLQLN-PNQEEVDHYGRHHHQQQQHSQAFFQPLECEPILQIGYQ---GQQDGMGAGPS 240

Query: 241 HAQQVNGFLPGWM 246
               VN ++ GW+
Sbjct: 241 ----VNNYMLGWL 244

The following BLAST results are available for this feature:

BLAST of CaUC07G139600 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038877181.1	7.7e-129	98.78	agamous-like MADS-box protein MADS2 isoform X2 [Benincasa hispida]	[more]
NP_001267667.1	6.5e-128	97.97	developmental protein SEPALLATA 2-like [Cucumis sativus] >AAF23363.1 CAGL2 [Cucu...	[more]
XP_022155022.1	3.2e-127	96.75	developmental protein SEPALLATA 1 [Momordica charantia]	[more]
KAG7018196.1	2.1e-126	97.56	Developmental protein SEPALLATA 2, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022955902.1	2.1e-126	97.56	developmental protein SEPALLATA 1 isoform X2 [Cucurbita moschata] >XP_022980708....	[more]

BLAST of CaUC07G139600 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LLR2	4.6e-108	81.78	Agamous-like MADS-box protein MADS2 OS=Vitis vinifera OX=29760 GN=MADS2 PE=2 SV=...	[more]
P29382	6.0e-100	76.59	Developmental protein SEPALLATA 1 OS=Arabidopsis thaliana OX=3702 GN=SEP1 PE=1 S...	[more]
P29384	5.8e-95	73.20	Developmental protein SEPALLATA 2 OS=Arabidopsis thaliana OX=3702 GN=SEP2 PE=1 S...	[more]
Q8LLR0	9.6e-82	69.20	Agamous-like MADS-box protein MADS4 OS=Vitis vinifera OX=29760 GN=MADS4 PE=2 SV=...	[more]
Q39685	3.7e-81	67.34	MADS-box protein CMB1 OS=Dianthus caryophyllus OX=3570 GN=CMB1 PE=2 SV=1	[more]

BLAST of CaUC07G139600 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
Q9SEG4	3.2e-128	97.97	CAGL2 OS=Cucumis sativus OX=3659 GN=CAGL2 PE=2 SV=1	[more]
A0A6J1DN93	1.6e-127	96.75	developmental protein SEPALLATA 1 OS=Momordica charantia OX=3673 GN=LOC111022168...	[more]
A0A6J1J038	1.0e-126	97.56	developmental protein SEPALLATA 1 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1GUW6	1.0e-126	97.56	developmental protein SEPALLATA 1 isoform X2 OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A1S3CLU0	1.9e-125	96.34	developmental protein SEPALLATA 1 OS=Cucumis melo OX=3656 GN=LOC103502415 PE=4 S...	[more]

BLAST of CaUC07G139600 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G15800.1	4.3e-101	76.59	K-box region and MADS-box transcription factor family protein	[more]
AT5G15800.2	1.5e-98	73.38	K-box region and MADS-box transcription factor family protein	[more]
AT3G02310.1	4.1e-96	73.20	K-box region and MADS-box transcription factor family protein	[more]
AT1G24260.1	5.2e-75	62.70	K-box region and MADS-box transcription factor family protein	[more]
AT1G24260.2	6.8e-75	62.45	K-box region and MADS-box transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 121..144
None	No IPR available	COILS	Coil	Coil	coord: 150..170
None	No IPR available	PANTHER	PTHR48019:SF87	DEVELOPMENTAL PROTEIN SEPALLATA 1	coord: 1..231
None	No IPR available	PANTHER	PTHR48019	SERUM RESPONSE FACTOR HOMOLOG	coord: 1..231
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 3..23 score: 68.71 coord: 23..38 score: 86.34 coord: 38..59 score: 67.51
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 1..60 e-value: 1.3E-41 score: 154.2
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 10..57 e-value: 2.9E-26 score: 90.7
IPR002100	Transcription factor, MADS-box	PROSITE	PS00350	MADS_BOX_1	coord: 3..57
IPR002100	Transcription factor, MADS-box	PROSITE	PS50066	MADS_BOX_2	coord: 1..61 score: 33.529243
IPR036879	Transcription factor, MADS-box superfamily	GENE3D	3.40.1810.10		coord: 13..83 e-value: 8.8E-28 score: 98.0
IPR036879	Transcription factor, MADS-box superfamily	SUPERFAMILY	55455	SRF-like	coord: 2..77
IPR002487	Transcription factor, K-box	PFAM	PF01486	K-box	coord: 84..171 e-value: 2.7E-27 score: 94.8
IPR002487	Transcription factor, K-box	PROSITE	PS51297	K_BOX	coord: 87..177 score: 15.533208
IPR033896	MADS MEF2-like	CDD	cd00265	MADS_MEF2_like	coord: 2..76 e-value: 1.08475E-45 score: 145.388

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC07G139600.1	CaUC07G139600.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding