CaUC07G139160 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC07G139160
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	ROTUNDIFOLIA like 10
Location	Ciama_Chr07: 29964353 .. 29964538 (-)
RNA-Seq Expression	CaUC07G139160
Synteny	CaUC07G139160

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGAGCTTTTTCAAGTGCATTGTAAATCCAAAACAAAAAACGAGAGGATGATGAAAAGCCATAGCCATAGGCTTACTTCCAAGTGTGCTGCTTTGATAAAGCAACAAAGAGGCAGAATTTACCTCCTTCGCCGCTGTGCAACCATGTTGCTATGTTCCTATATTCATGGAGATCATGACTAA

mRNA sequence

ATGGCTGAGCTTTTTCAAGTGCATTGTAAATCCAAAACAAAAAACGAGAGGATGATGAAAAGCCATAGCCATAGGCTTACTTCCAAGTGTGCTGCTTTGATAAAGCAACAAAGAGGCAGAATTTACCTCCTTCGCCGCTGTGCAACCATGTTGCTATGTTCCTATATTCATGGAGATCATGACTAA

Coding sequence (CDS)

ATGGCTGAGCTTTTTCAAGTGCATTGTAAATCCAAAACAAAAAACGAGAGGATGATGAAAAGCCATAGCCATAGGCTTACTTCCAAGTGTGCTGCTTTGATAAAGCAACAAAGAGGCAGAATTTACCTCCTTCGCCGCTGTGCAACCATGTTGCTATGTTCCTATATTCATGGAGATCATGACTAA

Protein sequence

MAELFQVHCKSKTKNERMMKSHSHRLTSKCAALIKQQRGRIYLLRRCATMLLCSYIHGDHD

Homology

[Close]

BLAST of CaUC07G139160 vs. NCBI nr
Match: KAE8649101.1 (hypothetical protein Csa_023809, partial [Cucumis sativus])

HSP 1 Score: 87.0 bits (214), Expect = 6.0e-14
Identity = 42/48 (87.50%), Postives = 46/48 (95.83%), Query Frame = 0


Query: 16 ERMMKSHSHR--LTSKCAALIKQQRGRIYLLRRCATMLLCSYIHGDHD 62
          ++MMKSHSHR  L+SKCAALIKQQRGRIYLLRRCAT+LLCSYIHGDHD
Sbjct: 4  KKMMKSHSHRHKLSSKCAALIKQQRGRIYLLRRCATILLCSYIHGDHD 51

[Close]

BLAST of CaUC07G139160 vs. NCBI nr
Match: XP_034901554.1 (uncharacterized protein LOC118039075 [Populus alba])

HSP 1 Score: 66.6 bits (161), Expect = 8.3e-08
Identity = 35/58 (60.34%), Postives = 41/58 (70.69%), Query Frame = 0


Query: 5  FQVHCKSKT---KNERMMKSHSHRLTSKCAALIKQQRGRIYLLRRCATMLLCSYIHGD 60
          FQV+ KS T   K     +S  H  T+KCAAL+K+QR RIY+LRRCATMLLC YI GD
Sbjct: 6  FQVYNKSSTGVKKAPATRRSKGHGFTNKCAALVKEQRARIYILRRCATMLLCWYIQGD 63

[Close]

BLAST of CaUC07G139160 vs. NCBI nr
Match: XP_017648585.1 (PREDICTED: uncharacterized protein LOC108488810 [Gossypium arboreum] >KAB2060923.1 hypothetical protein ES319_A10G052700v1 [Gossypium barbadense] >KAG4178538.1 hypothetical protein ERO13_A10G049600v2 [Gossypium hirsutum] >KAG8482367.1 hypothetical protein CXB51_027337 [Gossypium anomalum] >TYG97661.1 hypothetical protein ES288_A10G056300v1 [Gossypium darwinii] >TYI04984.1 hypothetical protein ES332_A10G056800v1 [Gossypium tomentosum] >TYJ13462.1 hypothetical protein E1A91_A10G053500v1 [Gossypium mustelinum])

HSP 1 Score: 66.2 bits (160), Expect = 1.1e-07
Identity = 34/63 (53.97%), Postives = 43/63 (68.25%), Query Frame = 0


Query: 1  MAELFQVHC----KSKTKNERMMKSHSHRLTSKCAALIKQQRGRIYLLRRCATMLLCSYI 60
          MAE   + C    K+ TK +R      H  ++KCA+L+KQQR R+Y+LRRCATMLLC YI
Sbjct: 1  MAEFHSLQCNCGIKASTKRKR------HGFSTKCASLVKQQRARLYILRRCATMLLCWYI 57

[Close]

BLAST of CaUC07G139160 vs. NCBI nr
Match: MBA0724339.1 (hypothetical protein [Gossypium laxum])

HSP 1 Score: 65.9 bits (159), Expect = 1.4e-07
Identity = 34/63 (53.97%), Postives = 43/63 (68.25%), Query Frame = 0


Query: 1  MAELFQVHC----KSKTKNERMMKSHSHRLTSKCAALIKQQRGRIYLLRRCATMLLCSYI 60
          MAE   + C    K+ TK +R      H  ++KCA+L+KQQR R+Y+LRRCATMLLC YI
Sbjct: 1  MAEFHSLKCNCGIKASTKRKR------HGFSTKCASLVKQQRARLYILRRCATMLLCWYI 57

[Close]

BLAST of CaUC07G139160 vs. NCBI nr
Match: KAF5743827.1 (hypothetical protein HS088_TW08G00415 [Tripterygium wilfordii])

HSP 1 Score: 65.5 bits (158), Expect = 1.9e-07
Identity = 35/59 (59.32%), Postives = 41/59 (69.49%), Query Frame = 0


Query: 1  MAELFQVHCKSKTKNERMMKSHSHRLTSKCAALIKQQRGRIYLLRRCATMLLCSYIHGD 60
          MAEL    C +K  ++    S    L+SKCA L+KQQR RIY+LRRCATMLLC YIHGD
Sbjct: 1  MAELKVKEC-NKFASKSKAPSKGSNLSSKCAKLVKQQRARIYILRRCATMLLCWYIHGD 58

[Close]

BLAST of CaUC07G139160 vs. ExPASy Swiss-Prot
Match: Q6IM82 (Small polypeptide DEVIL 19 OS=Arabidopsis thaliana OX=3702 GN=DVL19 PE=3 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 6.0e-09
Identity = 25/36 (69.44%), Postives = 30/36 (83.33%), Query Frame = 0


Query: 24 HRLTSKCAALIKQQRGRIYLLRRCATMLLCSYIHGD 60
          H  TSKC +L+K+QR R+Y+LRRCATML C YIHGD
Sbjct: 12 HAFTSKCVSLVKEQRARLYILRRCATMLCCWYIHGD 47

[Close]

BLAST of CaUC07G139160 vs. ExPASy Swiss-Prot
Match: F4HTB2 (Small polypeptide DEVIL 22 OS=Arabidopsis thaliana OX=3702 GN=DVL22 PE=3 SV=2)

HSP 1 Score: 59.3 bits (142), Expect = 1.7e-08
Identity = 25/36 (69.44%), Postives = 30/36 (83.33%), Query Frame = 0


Query: 24 HRLTSKCAALIKQQRGRIYLLRRCATMLLCSYIHGD 60
          H  TSKCA+L+K+QR R+Y+LRRCATML C YI GD
Sbjct: 12 HAFTSKCASLVKEQRARLYILRRCATMLCCWYIQGD 47

[Close]

BLAST of CaUC07G139160 vs. ExPASy Swiss-Prot
Match: Q8L7D0 (Small polypeptide DEVIL 13 OS=Arabidopsis thaliana OX=3702 GN=DVL13 PE=3 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 2.0e-04
Identity = 20/46 (43.48%), Postives = 29/46 (63.04%), Query Frame = 0


Query: 14  KNERMMKSHSHRLTSKCAALIKQQRGRIYLLRRCATMLLCSYIHGD 60
           K  R   S S  +T K ++L K+Q+ R Y++RRC  ML+C + HGD
Sbjct: 69  KERRSSSSSSSSITQKYSSLAKEQKARFYIMRRCVAMLVCWHKHGD 114

[Close]

BLAST of CaUC07G139160 vs. ExPASy TrEMBL
Match: A0A5D2NPT1 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A10G056800v1 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 5.3e-08
Identity = 34/63 (53.97%), Postives = 43/63 (68.25%), Query Frame = 0


Query: 1  MAELFQVHC----KSKTKNERMMKSHSHRLTSKCAALIKQQRGRIYLLRRCATMLLCSYI 60
          MAE   + C    K+ TK +R      H  ++KCA+L+KQQR R+Y+LRRCATMLLC YI
Sbjct: 1  MAEFHSLQCNCGIKASTKRKR------HGFSTKCASLVKQQRARLYILRRCATMLLCWYI 57

[Close]

BLAST of CaUC07G139160 vs. ExPASy TrEMBL
Match: A0A6P4QMQ4 (uncharacterized protein LOC108488810 OS=Gossypium arboreum OX=29729 GN=LOC108488810 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 5.3e-08
Identity = 34/63 (53.97%), Postives = 43/63 (68.25%), Query Frame = 0


Query: 1  MAELFQVHC----KSKTKNERMMKSHSHRLTSKCAALIKQQRGRIYLLRRCATMLLCSYI 60
          MAE   + C    K+ TK +R      H  ++KCA+L+KQQR R+Y+LRRCATMLLC YI
Sbjct: 1  MAEFHSLQCNCGIKASTKRKR------HGFSTKCASLVKQQRARLYILRRCATMLLCWYI 57

[Close]

BLAST of CaUC07G139160 vs. ExPASy TrEMBL
Match: A0A5J5TZV6 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_A10G052700v1 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 5.3e-08
Identity = 34/63 (53.97%), Postives = 43/63 (68.25%), Query Frame = 0


Query: 1  MAELFQVHC----KSKTKNERMMKSHSHRLTSKCAALIKQQRGRIYLLRRCATMLLCSYI 60
          MAE   + C    K+ TK +R      H  ++KCA+L+KQQR R+Y+LRRCATMLLC YI
Sbjct: 1  MAEFHSLQCNCGIKASTKRKR------HGFSTKCASLVKQQRARLYILRRCATMLLCWYI 57

[Close]

BLAST of CaUC07G139160 vs. ExPASy TrEMBL
Match: A0A5D2EWW7 (Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_A10G056300v1 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 5.3e-08
Identity = 34/63 (53.97%), Postives = 43/63 (68.25%), Query Frame = 0


Query: 1  MAELFQVHC----KSKTKNERMMKSHSHRLTSKCAALIKQQRGRIYLLRRCATMLLCSYI 60
          MAE   + C    K+ TK +R      H  ++KCA+L+KQQR R+Y+LRRCATMLLC YI
Sbjct: 1  MAEFHSLQCNCGIKASTKRKR------HGFSTKCASLVKQQRARLYILRRCATMLLCWYI 57

[Close]

BLAST of CaUC07G139160 vs. ExPASy TrEMBL
Match: A0A5D2XIA3 (Uncharacterized protein OS=Gossypium mustelinum OX=34275 GN=E1A91_A10G053500v1 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 5.3e-08
Identity = 34/63 (53.97%), Postives = 43/63 (68.25%), Query Frame = 0


Query: 1  MAELFQVHC----KSKTKNERMMKSHSHRLTSKCAALIKQQRGRIYLLRRCATMLLCSYI 60
          MAE   + C    K+ TK +R      H  ++KCA+L+KQQR R+Y+LRRCATMLLC YI
Sbjct: 1  MAEFHSLQCNCGIKASTKRKR------HGFSTKCASLVKQQRARLYILRRCATMLLCWYI 57

[Close]

BLAST of CaUC07G139160 vs. TAIR 10
Match: AT3G14362.1 (ROTUNDIFOLIA like 10 )

HSP 1 Score: 60.8 bits (146), Expect = 4.3e-10
Identity = 25/36 (69.44%), Postives = 30/36 (83.33%), Query Frame = 0


Query: 24 HRLTSKCAALIKQQRGRIYLLRRCATMLLCSYIHGD 60
          H  TSKC +L+K+QR R+Y+LRRCATML C YIHGD
Sbjct: 12 HAFTSKCVSLVKEQRARLYILRRCATMLCCWYIHGD 47

[Close]

BLAST of CaUC07G139160 vs. TAIR 10
Match: AT1G53708.1 (ROTUNDIFOLIA like 9 )

HSP 1 Score: 59.3 bits (142), Expect = 1.2e-09
Identity = 25/36 (69.44%), Postives = 30/36 (83.33%), Query Frame = 0


Query: 24 HRLTSKCAALIKQQRGRIYLLRRCATMLLCSYIHGD 60
          H  TSKCA+L+K+QR R+Y+LRRCATML C YI GD
Sbjct: 12 HAFTSKCASLVKEQRARLYILRRCATMLCCWYIQGD 47

[Close]

BLAST of CaUC07G139160 vs. TAIR 10
Match: AT2G29125.1 (ROTUNDIFOLIA like 2 )

HSP 1 Score: 45.8 bits (107), Expect = 1.4e-05
Identity = 20/46 (43.48%), Postives = 29/46 (63.04%), Query Frame = 0


Query: 14  KNERMMKSHSHRLTSKCAALIKQQRGRIYLLRRCATMLLCSYIHGD 60
           K  R   S S  +T K ++L K+Q+ R Y++RRC  ML+C + HGD
Sbjct: 69  KERRSSSSSSSSITQKYSSLAKEQKARFYIMRRCVAMLVCWHKHGD 114

[Close]

BLAST of CaUC07G139160 vs. TAIR 10
Match: AT3G55515.1 (ROTUNDIFOLIA like 7 )

HSP 1 Score: 43.1 bits (100), Expect = 9.2e-05
Identity = 18/49 (36.73%), Postives = 27/49 (55.10%), Query Frame = 0


Query: 13 TKNERMMKSHSHRLTSKCAALIKQQRGRIYLLRRCATMLLCSYIHGDHD 62
          T      K   +  T KC  L+K+QR R Y++RRC  ML+C   H +++
Sbjct: 27 TTRSSRQKQGKYGFTRKCGRLVKEQRARFYIMRRCVVMLICWTDHNNNN 75

[Close]

BLAST of CaUC07G139160 vs. TAIR 10
Match: AT4G13395.1 (ROTUNDIFOLIA like 12 )

HSP 1 Score: 42.4 bits (98), Expect = 1.6e-04
Identity = 18/37 (48.65%), Postives = 24/37 (64.86%), Query Frame = 0


Query: 25 RLTSKCAALIKQQRGRIYLLRRCATMLLCSYIHGDHD 62
          R   +C  + KQQR R+Y+LRRC +MLLC + H   D
Sbjct: 19 RFGDRCLLMAKQQRTRLYILRRCVSMLLCWHDHSISD 55

The following BLAST results are available for this feature:

BLAST of CaUC07G139160 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8649101.1	6.0e-14	87.50	hypothetical protein Csa_023809, partial [Cucumis sativus]	[more]
XP_034901554.1	8.3e-08	60.34	uncharacterized protein LOC118039075 [Populus alba]	[more]
XP_017648585.1	1.1e-07	53.97	PREDICTED: uncharacterized protein LOC108488810 [Gossypium arboreum] >KAB2060923...	[more]
MBA0724339.1	1.4e-07	53.97	hypothetical protein [Gossypium laxum]	[more]
KAF5743827.1	1.9e-07	59.32	hypothetical protein HS088_TW08G00415 [Tripterygium wilfordii]	[more]

BLAST of CaUC07G139160 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6IM82	6.0e-09	69.44	Small polypeptide DEVIL 19 OS=Arabidopsis thaliana OX=3702 GN=DVL19 PE=3 SV=1	[more]
F4HTB2	1.7e-08	69.44	Small polypeptide DEVIL 22 OS=Arabidopsis thaliana OX=3702 GN=DVL22 PE=3 SV=2	[more]
Q8L7D0	2.0e-04	43.48	Small polypeptide DEVIL 13 OS=Arabidopsis thaliana OX=3702 GN=DVL13 PE=3 SV=1	[more]

BLAST of CaUC07G139160 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D2NPT1	5.3e-08	53.97	Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A10G056800v1 P...	[more]
A0A6P4QMQ4	5.3e-08	53.97	uncharacterized protein LOC108488810 OS=Gossypium arboreum OX=29729 GN=LOC108488...	[more]
A0A5J5TZV6	5.3e-08	53.97	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_A10G052700v1 PE...	[more]
A0A5D2EWW7	5.3e-08	53.97	Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_A10G056300v1 PE=...	[more]
A0A5D2XIA3	5.3e-08	53.97	Uncharacterized protein OS=Gossypium mustelinum OX=34275 GN=E1A91_A10G053500v1 P...	[more]

BLAST of CaUC07G139160 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G14362.1	4.3e-10	69.44	ROTUNDIFOLIA like 10	[more]
AT1G53708.1	1.2e-09	69.44	ROTUNDIFOLIA like 9	[more]
AT2G29125.1	1.4e-05	43.48	ROTUNDIFOLIA like 2	[more]
AT3G55515.1	9.2e-05	36.73	ROTUNDIFOLIA like 7	[more]
AT4G13395.1	1.6e-04	48.65	ROTUNDIFOLIA like 12	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012552	DVL	PFAM	PF08137	DVL	coord: 35..53 e-value: 1.9E-7 score: 30.7
None	No IPR available	PANTHER	PTHR33102:SF4	DVL19-RELATED	coord: 1..60
None	No IPR available	PANTHER	PTHR33102	DVL19-RELATED-RELATED	coord: 1..60

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC07G139160.1	CaUC07G139160.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008285	negative regulation of cell population proliferation