CaUC07G139150 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC07G139150
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	30S ribosomal protein S1
Location	Ciama_Chr07: 29955768 .. 29961662 (-)
RNA-Seq Expression	CaUC07G139150
Synteny	CaUC07G139150

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGACGTGTATGTTTTAGCGTCACGCAAATAAGCGATGGGTTCCGATGGGATTTGGAGCAGTTGGTGGGTTTCCATTAGTCACTACGCTCTTCCCCGCCATTTCCTTCTCTCTCAACTCTCAAAATGCCAATCTTTGCTACAACTCTCCCATTTCTCTCTGCTCCTTCCTTTCTCTCACTCTTCCCCTCCATTGATGCTTCTCACTCCCCTTCAACCTCCTTCCTTTTACCCCTTAAATCCCCTTCTACACGCCCTTCCAACTTCCCCTCCAGAGTTTCCCTCTCCGGAAAACCCGACCCCCTTGCTGCCGGACTTCTAGACACTTCCCCTTCCTCCCCGGAATCACTTCGACGTGCTCGGGTGACTACATTCTTCCTCCCTTCTCTTTAACCCTACTTTCCTCTTTACATTTGAACCTACAGCTTTGCTTTATTTTAATTTCCTCTTTCAGAATTTAACAAACCTAACATGCGTAACGAAGTAATATGTAATACTACTAACTTTGCTCTTACAAACACAAGGACCATTACACGTTGAAGTTCATTCATATTTGAAAACATTCATTATTTTATTGGCCATGTTTAATTAGGAACTTGGTTGCTATAACCAATTCAACATTTCCCATCAAAACTTTATGCTTAAACTGAGTCTGAGTTTCTATCACTATCCATCGTTTAACTCTTATAATCTAATACTTGGTTTCTGCAAAGAAGTAGAGATCTGCTGATTGGAAGGCAGCGAGGGAATTCCTTGATAATGGATTTATCTACGAGGGTAGGATTGAAGGTTCAAACGCTGGAGGTTTACTTGTCCGATTCTATTCTCTTATGGGGTTTCTTCCATTCCCTCAATTGAGCCCGTCTCATTCTTGTAAAGGTACAAGTTTTCTGAATCCTTTGTGCTATATTTTTAGTTTTGTCGTATAGTTACCTTGATGACATGTTTATGCGCCCCTTTTAACTTGGTCATTCCTTGTGATAAATTCTATGGAGAGGAAGTCAGCAGTTTACCTAATAATGAATTAAATTGCTTGAGGTAGATGTGTTTCCAACTTTTAACATGCTTCCTCCCTCCCCTTCCCTTCTGAATTCCTTGCAGAACCATACAAGAGTATTCAAGATATTGCAAAAAGCTTAATTGGTTCGCTTATACCAGTGAAGGTAGTTGGCTTCTATGGTTGTCCATAATTTTAATCATTTATAGTTTCGAAACGTTTCTTCTAGTTAGCTGAAGACTGGTATACCTCTATATACTTCGTCACTCCCTAGGTTTACTGCTGAAAGAAATCAGCAGACTTAGAGTCCAACATGTCCAACACATCAAAATAAAACTCTTTTTATATTTGTTTCTTTAATTTTTTGAGTTGTTGGGATACGCCCAAAAGAGGGAGTCAAATTATACATGGTTCGATAATGTACACACTCGGTCGCATGCCAAACACCAACTTTTGTCTTGGAGGAAGCAAACTACTCTACAACCATGAATCACTTTGAGGCTTGCTATATTTATTGTTATTGTTATTGTTATTATATTTTTTATATATTTAAAAGAAACGATCATTGTATTGAACCAAAAACAAGACAACCTAGGGGTTGGGGGAAGAGGAAACCCCTGACCAACAACTTACAAAAGTGCAGTGCCCACTGTCGCTGTCACTAATAATCATGAAGTGGTTGGAGTCACAAAAGAAGTTTTTGTGGTTTTTATGGTTTTTACACCACCAAGAGGTTGTATGTTGTACACTATTACGAAAAGAATCTGCCGAGGTATGATTTCCTTAAATAATACTCCAATTTCTCTCTTTCCAAATAAACCAAAGAGTAGCTCTGATAGTTCAATTCCATAAGATTCTAGCTTTTCCTTTGAAACTCAGACATTTAATACAGAAGCTGGAGGGAATTAGCAAGTTCAAATGTGTGAAAATAAAGCTCCACACTTTCTAAGCAAAATAGCAGCTGAGGGAAAATGGTTCATTGGTTCCATGTCTCTAAAGCAAAGGCAGCAGATGGGAGGAGAAAGAGTCCAGTGAGGAAACTTTCTCTGAACTCTGTCTTGGGTGTTTGGGCTCCTGTTCAACAAAGACCAAGTGAAGACCTTTACTTTCTTGGGGACTTCAAAGTTGCAGACTTTGTCCACCTCTGGAACTGTAAGGGTCGTCCTTGGCTTAGTGAGATGTATAAAGGCTGATTTAACAGAGAGTCCCAGACGTGTCAAGCTTCCACCTGGCACCATCAAAGCCCCTCCCAAATTGCACCGACTCAAGTAAGCCTGTGAACACAGCCCATCTTGGTAATCCTCTATCGAACAGTTTTTTACAAATACCGAAGTTCCACATCTGCTTTGAGGCAACCCAGCAATCAGGAATCAGCAATAGAAGCCCCCTTTTTAGACCAGAGGCCATATAACTTAGAAGTCAGGAAGAACAGAGGATAAAGAGGTTTTCCCCGTGCCACGAGTCTTTCCCAAAAAGATATGTGATGCCTGTTAGCCACCTTGAATTGAACAGAATTGACAAAGTCAAAGACATCTCTGTTTTTGTCTACATTCACCCACGGTCTGCCCCTATCTGAGGTTTGGTACTCCAGTTGTAATTCTCTACCCAAGACAAAGTAGCAATAACTCTCCTCCACAAGCTACTATCTTCATGAGAAAAGTTCAACAACCATTAAGGGTAAGATAGTTGTTGACAGCATTCATATCCCACAATGTAAGCGCTTGAGCTCTACTTGCGTTGTTGGCTTGGGATGATAAGAACAAGTTCTCGTCAATTGTTAAGAGTGCCAACAAAATCTCACATTTGCGTTTGCTAAGGAAGGGAGAGATCCATCTTTAATAAGTTAGGACAATTATCACCTCTAGTCTAAGGCTGACTTATACCTGTAGTCAACAATATCAAACCATTGTGGAGATGTGTGAAGGGTCCATTGTCCTTGACAAAATGTTCATCTTGTTATGGAGTGGGGACACCAAGTACTTCCTCCTATTCAATCTTTCTTTCTTTCTATCTTCTTTTTTTTTCTGTGTTCTTCAGCTTTAGCTATGTCAGATGCTTCTCTGGCTCCTATAACCACTTGAGAAAACGATCACTCTCCCTCCCGTTGAAATCTTTAGAGTACATACTGTCTCCACTTTGCTTCTCTGTATCTTTCAAATGTTTTTCTGAAATTCCTCAATGATTTCCCAAAATATGCACCGATATCTCCTATTAACAGCTGCAGGAACAGTAATACATTGCTTAGTGCCATCATGGGATAGTGAAGTGATTTCTTCAAATCAACCACTGTATTTTGATTTTTTTTGCACCAAGAGAATCACATCGTTAAACATTGAAAATTTTTTAAGTGCTTTTGAAGCAACTCCACGGATATTTCCTCGTTTCCTCCAGCTTTTGAAATATTTGAGGGAGGATGTGTTAAACCCTGTCATTTCTTATTTTCTAGGTAATCCAAGCAGATGAGAGAAACAAGAAATTGATATTTTCAGAGAAGGAAGCTGCGTGGTCAAAGTTTTCTGAGCAAGTTGGTGTAGGAGATGTGTATGAAGCTAGAGTTGGATCTGTGGAGGATTATGGTGCCTTTGTACATCTACGTTTCTCTGATGGTAATATTTTGTGTTCTATTAAATTATTAATCTTATTCGCTGATGTATTTAGAAACAAATTGCCACTTACTTTCCAAAATTCTGCAGGTCTTTATCATCTTACTGGGCTAGTACATGTATCAGAAGTTTCATGGGATCTAGTTCAGGATGTAAGAGACATATTAAGTGAGGGTGACGAAGTGACAGTGAAAGTCATTAATGTTGATAGGCAAGTGGTCTCAGATTCCTTCTTATTACCAACTAATTTTCACTTTCTATGAAAAATCTGTTATTTCAAGTATTTTCATTTATTATGTGGTAGATTGATCTTTTGATCTTTTTTTTTTTTTCAATATTTATTTATCTAATTATTTTGCATGGGCCTCGTGAAATTTGTTAGGGGCAGGGTTTTGGTTGTGTTAGATAGGGAAGTTAGTTAGTAAGTGAGAGTGCAGAAAGTGGGAAATTAGAGGAGTCACAAAGACAGCTGAAGATTCTCATAGATCCCTGTCCTATTTTTGAACAATTATTATTATTATTATTTAAAAAATAATCCACGCCCCATGTTACGAATTAGATTGCTTCTGATTCTTTCTCAATGAAATACAATCTGTTTTACTCTGATTATGCAATTTTCTGAATTTAGCCAAAGGAGACAGTTGATTTGTAATTTTTGCGCTAGGTTAAGAAATGGAAAACAAGGAAAATGTGTTAGACTTGCTAAATTTATATCATCTCAAACTTTTAGTCTATGACCATTGCCATGCACTTCAGCGTTGGCATACTGAATCTGTCTTATTGGTTTCATGCAGAGATAAGTCCAGGATCACATTGTCAATCAAGCAACTCGAGGAAGATCCACTTTTAGAAACATTGGACAAAGTAATACCGCAGGTTTGTGAAACATTATTGTACACATTTAGTCAACCTTTTCAACTACTTTCATCTCCTACCTGAGCTTTAGCTACATGAACGTCATAATAAACAGGATGGTTCTGCTGAACCTGATTCTTTTGGACCTAAAAGCGACAGTGAAATTATACCCCTACCTGGACTTGAAACAATAATTGAAGAGCTACTGCAGGAAGATGGGTATGTTACTGTTTTTAGCTTGACATATTGAGGGTTGTTTCGGAAAATGTGAAAGCTATGGAAGTAATACATGAGCACTGTCTATAAGGATTAATGATAATAATGTATCAGCATCGACAGTACTCATAAATATGCTTTGGCTTGTCCTGAATTCTTGAGTTTTAACTTTTATGTTCCTTGTTATGTCTAACTCAAAAGCTAGCTTCTAGTGATATTAGGGCACGTGCAATTTTGTGGACATACTAAATATTCTTAAAAAACAAAAGCACGGACAAAGTAATTTTACACATACAAACAAGGAGATGTGATATTTCTAGAAAATAAGGAGACAGGCAATGTGGTGGACATGCTAATAGTTGTATAGATTCATACACACGTTTAGGGTTCAATATTGAGATGAATTGACACTGAAAAAACTAAAGAGAGCTTCTCTGGAACTTACTCCCTTTCTTTCACGCCATTGATAACCTTTCTTGGGCTTTTAGTCATTGGTGGGGATCATATTATGAGTATGTGACTTCTCAAGCTATCTTAGCAATATGATCTTAATTTGGTTAGTTTGAATATCAGTATAGTAGATGTTCGTGTCAACCGACAAGGATTTGAGAAACGGGTGGTTTCACAAGACCTACAGCTTTGGCTATCAAATGTAAGTTGGTTTGTCCTATGAGTATGATGTGGGGCACCTCCACATCTCATTGGCTTCAATTTCTTGCTTCTCTCATCTCATTGTTACTGTAGGCACCTCCAGTTGAAAAGAAGTTCACTCTCCTTGCTCGTGCCGGGAGGCAGGTAGTTGTCTCTCCTCACACACGCGCACAAACACATGAACACAGATACTAATCCATTGAGTGTATGCGAATTTAGGTTCAAGAAATACAGCTGACAACATCACTCGATCAGGAAGGTATAAAAAGAGCATTGCAGCGAGTGTTGGAACGTGTCCCATGATTTTGCAAACAAAGTTTATTTTGTTCGATTTTGTATGAAGCTGTCTGTAAAGAAGATGTCAATTCAATTGTTTCCAGTAAGTTGTATATTTTGTCTGATCTCTACGGTAAAAGTAAAAGGTGTTGTAAGCATGAATGCTCGATCATTGTCCGACAGCCTTCTGCTTGGAAGATTTGTAGTTTTTGCTTTTCATAGCCAATATTATATATACACGTATGTATGTATATATTCTTTGTTTCATCGAATTCAAAACATAGGTAAATTTCAATTAAC

mRNA sequence

GGACGTGTATGTTTTAGCGTCACGCAAATAAGCGATGGGTTCCGATGGGATTTGGAGCAGTTGGTGGGTTTCCATTAGTCACTACGCTCTTCCCCGCCATTTCCTTCTCTCTCAACTCTCAAAATGCCAATCTTTGCTACAACTCTCCCATTTCTCTCTGCTCCTTCCTTTCTCTCACTCTTCCCCTCCATTGATGCTTCTCACTCCCCTTCAACCTCCTTCCTTTTACCCCTTAAATCCCCTTCTACACGCCCTTCCAACTTCCCCTCCAGAGTTTCCCTCTCCGGAAAACCCGACCCCCTTGCTGCCGGACTTCTAGACACTTCCCCTTCCTCCCCGGAATCACTTCGACGTGCTCGGAGATCTGCTGATTGGAAGGCAGCGAGGGAATTCCTTGATAATGGATTTATCTACGAGGGTAGGATTGAAGGTTCAAACGCTGGAGGTTTACTTGTCCGATTCTATTCTCTTATGGGGTTTCTTCCATTCCCTCAATTGAGCCCGTCTCATTCTTGTAAAGAACCATACAAGAGTATTCAAGATATTGCAAAAAGCTTAATTGGTTCGCTTATACCAGTGAAGAGAGTCCCAGACGTGTCAAGCTTCCACCTGGCACCATCAAAGCCCCTCCCAAATTGCACCGACTCAAGTAAGCCTGTGAACACAGCCCATCTTGCTGCAGGAACAGTAATACATTGCTTAGTGCCATCATGGGATAGTGAAGTGATTTCTTCAAATCAACCACTGGTAATCCAAGCAGATGAGAGAAACAAGAAATTGATATTTTCAGAGAAGGAAGCTGCGTGGTCAAAGTTTTCTGAGCAAGTTGGTGTAGGAGATGTGTATGAAGCTAGAGTTGGATCTGTGGAGGATTATGGTGCCTTTGTACATCTACGTTTCTCTGATGGTAATATTTTGTGTTCTATTAAATTATTAATCTTATTCGCTGATGTATTTAGAAACAAATTGCCACTTACTTTCCAAAATTCTGCAGGTCTTTATCATCTTACTGGGCTAGTACATGTATCAGAAGTTTCATGGGATCTAGTTCAGGATGTAAGAGACATATTAAGTGAGGGTGACGAAGTGACAGTGAAAGTCATTAATGTTGATAGGCAAATAGGGAAGTTAGTTAGTAAAGATAAGTCCAGGATCACATTGTCAATCAAGCAACTCGAGGAAGATCCACTTTTAGAAACATTGGACAAAGTAATACCGCAGGATGGTTCTGCTGAACCTGATTCTTTTGGACCTAAAAGCGACAGTGAAATTATACCCCTACCTGGACTTGAAACAATAATTGAAGAGCTACTGCAGGAAGATGGTTTGAATATCAGTATAGTAGATGTTCGTGTCAACCGACAAGGATTTGAGAAACGGGTGGTTTCACAAGACCTACAGCTTTGGCTATCAAATGCACCTCCAGTTGAAAAGAAGTTCACTCTCCTTGCTCGTGCCGGGAGGCAGGTTCAAGAAATACAGCTGACAACATCACTCGATCAGGAAGGTATAAAAAGAGCATTGCAGCGAGTGTTGGAACGTGTCCCATGATTTTGCAAACAAAGTTTATTTTGTTCGATTTTGTATGAAGCTGTCTGTAAAGAAGATGTCAATTCAATTGTTTCCAGTAAGTTGTATATTTTGTCTGATCTCTACGGTAAAAGTAAAAGGTGTTGTAAGCATGAATGCTCGATCATTGTCCGACAGCCTTCTGCTTGGAAGATTTGTAGTTTTTGCTTTTCATAGCCAATATTATATATACACGTATGTATGTATATATTCTTTGTTTCATCGAATTCAAAACATAGGTAAATTTCAATTAAC

Coding sequence (CDS)

ATGCCAATCTTTGCTACAACTCTCCCATTTCTCTCTGCTCCTTCCTTTCTCTCACTCTTCCCCTCCATTGATGCTTCTCACTCCCCTTCAACCTCCTTCCTTTTACCCCTTAAATCCCCTTCTACACGCCCTTCCAACTTCCCCTCCAGAGTTTCCCTCTCCGGAAAACCCGACCCCCTTGCTGCCGGACTTCTAGACACTTCCCCTTCCTCCCCGGAATCACTTCGACGTGCTCGGAGATCTGCTGATTGGAAGGCAGCGAGGGAATTCCTTGATAATGGATTTATCTACGAGGGTAGGATTGAAGGTTCAAACGCTGGAGGTTTACTTGTCCGATTCTATTCTCTTATGGGGTTTCTTCCATTCCCTCAATTGAGCCCGTCTCATTCTTGTAAAGAACCATACAAGAGTATTCAAGATATTGCAAAAAGCTTAATTGGTTCGCTTATACCAGTGAAGAGAGTCCCAGACGTGTCAAGCTTCCACCTGGCACCATCAAAGCCCCTCCCAAATTGCACCGACTCAAGTAAGCCTGTGAACACAGCCCATCTTGCTGCAGGAACAGTAATACATTGCTTAGTGCCATCATGGGATAGTGAAGTGATTTCTTCAAATCAACCACTGGTAATCCAAGCAGATGAGAGAAACAAGAAATTGATATTTTCAGAGAAGGAAGCTGCGTGGTCAAAGTTTTCTGAGCAAGTTGGTGTAGGAGATGTGTATGAAGCTAGAGTTGGATCTGTGGAGGATTATGGTGCCTTTGTACATCTACGTTTCTCTGATGGTAATATTTTGTGTTCTATTAAATTATTAATCTTATTCGCTGATGTATTTAGAAACAAATTGCCACTTACTTTCCAAAATTCTGCAGGTCTTTATCATCTTACTGGGCTAGTACATGTATCAGAAGTTTCATGGGATCTAGTTCAGGATGTAAGAGACATATTAAGTGAGGGTGACGAAGTGACAGTGAAAGTCATTAATGTTGATAGGCAAATAGGGAAGTTAGTTAGTAAAGATAAGTCCAGGATCACATTGTCAATCAAGCAACTCGAGGAAGATCCACTTTTAGAAACATTGGACAAAGTAATACCGCAGGATGGTTCTGCTGAACCTGATTCTTTTGGACCTAAAAGCGACAGTGAAATTATACCCCTACCTGGACTTGAAACAATAATTGAAGAGCTACTGCAGGAAGATGGTTTGAATATCAGTATAGTAGATGTTCGTGTCAACCGACAAGGATTTGAGAAACGGGTGGTTTCACAAGACCTACAGCTTTGGCTATCAAATGCACCTCCAGTTGAAAAGAAGTTCACTCTCCTTGCTCGTGCCGGGAGGCAGGTTCAAGAAATACAGCTGACAACATCACTCGATCAGGAAGGTATAAAAAGAGCATTGCAGCGAGTGTTGGAACGTGTCCCATGA

Protein sequence

MPIFATTLPFLSAPSFLSLFPSIDASHSPSTSFLLPLKSPSTRPSNFPSRVSLSGKPDPLAAGLLDTSPSSPESLRRARRSADWKAAREFLDNGFIYEGRIEGSNAGGLLVRFYSLMGFLPFPQLSPSHSCKEPYKSIQDIAKSLIGSLIPVKRVPDVSSFHLAPSKPLPNCTDSSKPVNTAHLAAGTVIHCLVPSWDSEVISSNQPLVIQADERNKKLIFSEKEAAWSKFSEQVGVGDVYEARVGSVEDYGAFVHLRFSDGNILCSIKLLILFADVFRNKLPLTFQNSAGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVDRQIGKLVSKDKSRITLSIKQLEEDPLLETLDKVIPQDGSAEPDSFGPKSDSEIIPLPGLETIIEELLQEDGLNISIVDVRVNRQGFEKRVVSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQLTTSLDQEGIKRALQRVLERVP

Homology

[Close]

BLAST of CaUC07G139150 vs. NCBI nr
Match: XP_038897871.1 (30S ribosomal protein S1 homolog B [Benincasa hispida])

HSP 1 Score: 610.9 bits (1574), Expect = 9.2e-171
Identity = 352/475 (74.11%), Postives = 360/475 (75.79%), Query Frame = 0


Query: 1   MPIFATTLPFLSAPSFLSLFPSIDASHSPSTSFLLPLKSPSTRPSNFPSRVSLSGKPDPL 60
           MPIFA TL  + A SFLSL  S     S STSF+LP KSPS RPSNFP+RVSLSGKPDP+
Sbjct: 1   MPIFAATLGSVFAHSFLSLLASTTDGAS-STSFILPQKSPSKRPSNFPARVSLSGKPDPI 60

Query: 61  AAGLLDTSPSSPESLRRARRSADWKAAREFLDNGFIYEGRIEGSNAGGLLVRFYSLMGFL 120
            AG+LDTSPSSPESLRRARRSADWKAARE+LDNGFIYEGRIEGSNAGGLLVRFYSLMGFL
Sbjct: 61  -AGVLDTSPSSPESLRRARRSADWKAAREYLDNGFIYEGRIEGSNAGGLLVRFYSLMGFL 120

Query: 121 PFPQLSPSHSCKEPYKSIQDIAKSLIGSLIPVKRVPDVSSFHLAPSKPLPNCTDSSKPVN 180
           PFPQLSPSHSCKEPYKSIQDIAKSLIGSLI VK                           
Sbjct: 121 PFPQLSPSHSCKEPYKSIQDIAKSLIGSLISVK--------------------------- 180

Query: 181 TAHLAAGTVIHCLVPSWDSEVISSNQPLVIQADERNKKLIFSEKEAAWSKFSEQVGVGDV 240
                                       VIQADERNKKLIFSEKEAAWSKFSEQVGVGDV
Sbjct: 181 ----------------------------VIQADERNKKLIFSEKEAAWSKFSEQVGVGDV 240

Query: 241 YEARVGSVEDYGAFVHLRFSDGNILCSIKLLILFADVFRNKLPLTFQNSAGLYHLTGLVH 300
           YEARVGSVEDYGAFVHLRFSD                             GLYHLTGLVH
Sbjct: 241 YEARVGSVEDYGAFVHLRFSD-----------------------------GLYHLTGLVH 300

Query: 301 VSEVSWDLVQDVRDILSEGDEVTVKVINVDRQIGKLVSKDKSRITLSIKQLEEDPLLETL 360
           VSEVSWDLVQDVRDILSEGDEVTVKVINVDR        DKSRITLSIKQLEEDPLLETL
Sbjct: 301 VSEVSWDLVQDVRDILSEGDEVTVKVINVDR--------DKSRITLSIKQLEEDPLLETL 360

Query: 361 DKVIPQDGSAEPDSFGPKSDSEIIPLPGLETIIEELLQEDGLNISIVDVRVNRQGFEKRV 420
           DKVIPQ GSAEPDSFGPKSDSEI+PLPGLETIIEELLQEDG    IVD+ VNRQGFEKRV
Sbjct: 361 DKVIPQGGSAEPDSFGPKSDSEIMPLPGLETIIEELLQEDG----IVDICVNRQGFEKRV 377

Query: 421 VSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQLTTSLDQEGIKRALQRVLERVP 476
           VSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQLTTSLDQEGIKRALQRVLERVP
Sbjct: 421 VSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQLTTSLDQEGIKRALQRVLERVP 377

[Close]

BLAST of CaUC07G139150 vs. NCBI nr
Match: XP_023526022.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111789621 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 588.2 bits (1515), Expect = 6.4e-164
Identity = 338/476 (71.01%), Postives = 358/476 (75.21%), Query Frame = 0


Query: 1   MPIF-ATTLPFLSAPSFLSLFPSIDASHSPSTSFLLPLKSPSTRPSNFPSRVSLSGKPDP 60
           MPIF ATTL  LSA SFL+L  S DAS+S STSF L  KSPS RPSNF +RVSLSGKPDP
Sbjct: 47  MPIFAATTLGSLSAHSFLALSASTDASNSLSTSFFLTHKSPSKRPSNFAARVSLSGKPDP 106

Query: 61  LAAGLLDTSPSSPESLRRARRSADWKAAREFLDNGFIYEGRIEGSNAGGLLVRFYSLMGF 120
           + AG+L++SPSSPES+RRARRSADWK ARE+LD+GFI++GRIEGSNAGGLLVRFYSL+GF
Sbjct: 107 I-AGVLESSPSSPESVRRARRSADWKTAREYLDSGFIFKGRIEGSNAGGLLVRFYSLVGF 166

Query: 121 LPFPQLSPSHSCKEPYKSIQDIAKSLIGSLIPVKRVPDVSSFHLAPSKPLPNCTDSSKPV 180
           LPFP LSP+HSCKEPYKSIQDIAKSLIGSLIPVK                          
Sbjct: 167 LPFPLLSPAHSCKEPYKSIQDIAKSLIGSLIPVK-------------------------- 226

Query: 181 NTAHLAAGTVIHCLVPSWDSEVISSNQPLVIQADERNKKLIFSEKEAAWSKFSEQVGVGD 240
                                        VIQADE+NK LIFSEKEAAWSKFSEQVGVGD
Sbjct: 227 -----------------------------VIQADEKNKNLIFSEKEAAWSKFSEQVGVGD 286

Query: 241 VYEARVGSVEDYGAFVHLRFSDGNILCSIKLLILFADVFRNKLPLTFQNSAGLYHLTGLV 300
           VYEARVGSVEDYGAFVHLRFSD                             GLYHLTGLV
Sbjct: 287 VYEARVGSVEDYGAFVHLRFSD-----------------------------GLYHLTGLV 346

Query: 301 HVSEVSWDLVQDVRDILSEGDEVTVKVINVDRQIGKLVSKDKSRITLSIKQLEEDPLLET 360
           H+SEVSWDLVQDVRDILSEGDEV VKVI+VDR        DKSRITLSIKQLEEDPLLET
Sbjct: 347 HISEVSWDLVQDVRDILSEGDEVRVKVIDVDR--------DKSRITLSIKQLEEDPLLET 406

Query: 361 LDKVIPQDGSAEPDSFGPKSDSEIIPLPGLETIIEELLQEDGLNISIVDVRVNRQGFEKR 420
           LDKVIPQD SAEPDSFGPKSDSEIIPLPGL+TI EELLQE+G    I DV +NRQGFEKR
Sbjct: 407 LDKVIPQDDSAEPDSFGPKSDSEIIPLPGLDTIFEELLQEEG----IEDVHINRQGFEKR 425

Query: 421 VVSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQLTTSLDQEGIKRALQRVLERVP 476
           VVSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQLTTSLDQEGIKRALQRVLERVP
Sbjct: 467 VVSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQLTTSLDQEGIKRALQRVLERVP 425

[Close]

BLAST of CaUC07G139150 vs. NCBI nr
Match: KAG7018465.1 (30S ribosomal protein S1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 587.8 bits (1514), Expect = 8.4e-164
Identity = 338/476 (71.01%), Postives = 359/476 (75.42%), Query Frame = 0


Query: 1   MPIF-ATTLPFLSAPSFLSLFPSIDASHSPSTSFLLPLKSPSTRPSNFPSRVSLSGKPDP 60
           MPIF ATTL  LSA SFLSL  S DAS+S STSFLL  KSPS RPSNF +RVSLSGKP+P
Sbjct: 1   MPIFAATTLGSLSAHSFLSLSASADASNSLSTSFLLTHKSPSKRPSNFAARVSLSGKPEP 60

Query: 61  LAAGLLDTSPSSPESLRRARRSADWKAAREFLDNGFIYEGRIEGSNAGGLLVRFYSLMGF 120
           + AG+L++SPSSPES+RRARRSADWK ARE+LD+GFI++GRIEGSNAGGLLVRFYSL+GF
Sbjct: 61  I-AGVLESSPSSPESVRRARRSADWKTAREYLDSGFIFKGRIEGSNAGGLLVRFYSLVGF 120

Query: 121 LPFPQLSPSHSCKEPYKSIQDIAKSLIGSLIPVKRVPDVSSFHLAPSKPLPNCTDSSKPV 180
           LPFP LSP+HSCKEPYKSIQDIAKSLIGSLIPVK                          
Sbjct: 121 LPFPLLSPAHSCKEPYKSIQDIAKSLIGSLIPVK-------------------------- 180

Query: 181 NTAHLAAGTVIHCLVPSWDSEVISSNQPLVIQADERNKKLIFSEKEAAWSKFSEQVGVGD 240
                                        VIQADE+NK LIFSEKEAAWSKFSE+VGVGD
Sbjct: 181 -----------------------------VIQADEKNKNLIFSEKEAAWSKFSEKVGVGD 240

Query: 241 VYEARVGSVEDYGAFVHLRFSDGNILCSIKLLILFADVFRNKLPLTFQNSAGLYHLTGLV 300
           VYEARVGSVEDYGAFVHLRFSD                             GLYHLTGLV
Sbjct: 241 VYEARVGSVEDYGAFVHLRFSD-----------------------------GLYHLTGLV 300

Query: 301 HVSEVSWDLVQDVRDILSEGDEVTVKVINVDRQIGKLVSKDKSRITLSIKQLEEDPLLET 360
           H+SEVSWDLVQDVRDILSEGDEV VKVI+VDR        DKSRITLSIKQLEEDPLLET
Sbjct: 301 HISEVSWDLVQDVRDILSEGDEVRVKVIDVDR--------DKSRITLSIKQLEEDPLLET 360

Query: 361 LDKVIPQDGSAEPDSFGPKSDSEIIPLPGLETIIEELLQEDGLNISIVDVRVNRQGFEKR 420
           LDKVIPQD SAEPDSFGPKSDSEIIPLPGL+TI EELLQE+G    I DV +NRQGFEKR
Sbjct: 361 LDKVIPQDDSAEPDSFGPKSDSEIIPLPGLDTIFEELLQEEG----IEDVHINRQGFEKR 379

Query: 421 VVSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQLTTSLDQEGIKRALQRVLERVP 476
           VVSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQLTTSLDQEGIKRALQRVLERVP
Sbjct: 421 VVSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQLTTSLDQEGIKRALQRVLERVP 379

[Close]

BLAST of CaUC07G139150 vs. NCBI nr
Match: XP_022979820.1 (uncharacterized protein LOC111479406 [Cucurbita maxima])

HSP 1 Score: 587.8 bits (1514), Expect = 8.4e-164
Identity = 336/476 (70.59%), Postives = 358/476 (75.21%), Query Frame = 0


Query: 1   MPIF-ATTLPFLSAPSFLSLFPSIDASHSPSTSFLLPLKSPSTRPSNFPSRVSLSGKPDP 60
           MPIF ATTL  LSA SFLSL  S DASHS S+SF+L  KSPS RPSNF +RVSLSGKP+P
Sbjct: 1   MPIFAATTLGSLSAHSFLSLLASTDASHSLSSSFVLTHKSPSKRPSNFAARVSLSGKPEP 60

Query: 61  LAAGLLDTSPSSPESLRRARRSADWKAAREFLDNGFIYEGRIEGSNAGGLLVRFYSLMGF 120
           + AG+L++SPSSPES+RRARRSADWK ARE+LD+GFI++GRIEGSNAGGLLVRFYSL+GF
Sbjct: 61  I-AGVLESSPSSPESVRRARRSADWKTAREYLDSGFIFKGRIEGSNAGGLLVRFYSLVGF 120

Query: 121 LPFPQLSPSHSCKEPYKSIQDIAKSLIGSLIPVKRVPDVSSFHLAPSKPLPNCTDSSKPV 180
           LPFP LSP+HSCKEPYKSIQDIAKSLIGSLIPVK                          
Sbjct: 121 LPFPLLSPAHSCKEPYKSIQDIAKSLIGSLIPVK-------------------------- 180

Query: 181 NTAHLAAGTVIHCLVPSWDSEVISSNQPLVIQADERNKKLIFSEKEAAWSKFSEQVGVGD 240
                                        VIQADE+NK LIFSEKEAAWSKFSEQVGVGD
Sbjct: 181 -----------------------------VIQADEKNKNLIFSEKEAAWSKFSEQVGVGD 240

Query: 241 VYEARVGSVEDYGAFVHLRFSDGNILCSIKLLILFADVFRNKLPLTFQNSAGLYHLTGLV 300
           VYEARVGSVEDYGAFVHLRFSD                             G YHLTGLV
Sbjct: 241 VYEARVGSVEDYGAFVHLRFSD-----------------------------GFYHLTGLV 300

Query: 301 HVSEVSWDLVQDVRDILSEGDEVTVKVINVDRQIGKLVSKDKSRITLSIKQLEEDPLLET 360
           H+SEVSWDLVQDVRDILSEGDEV VKV++VDR        DKSRITLSIKQLEEDPLLET
Sbjct: 301 HISEVSWDLVQDVRDILSEGDEVRVKVLDVDR--------DKSRITLSIKQLEEDPLLET 360

Query: 361 LDKVIPQDGSAEPDSFGPKSDSEIIPLPGLETIIEELLQEDGLNISIVDVRVNRQGFEKR 420
           LDKVIPQD SAEPDSFGPKSDSEIIPLPGL+TI EELLQE+G    I DV +NRQGFEKR
Sbjct: 361 LDKVIPQDDSAEPDSFGPKSDSEIIPLPGLDTIFEELLQEEG----IEDVHINRQGFEKR 379

Query: 421 VVSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQLTTSLDQEGIKRALQRVLERVP 476
           VVSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQLTTSLDQEGIKRALQRVLERVP
Sbjct: 421 VVSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQLTTSLDQEGIKRALQRVLERVP 379

[Close]

BLAST of CaUC07G139150 vs. NCBI nr
Match: XP_022955545.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111457527 [Cucurbita moschata])

HSP 1 Score: 586.6 bits (1511), Expect = 1.9e-163
Identity = 337/476 (70.80%), Postives = 359/476 (75.42%), Query Frame = 0


Query: 1   MPIF-ATTLPFLSAPSFLSLFPSIDASHSPSTSFLLPLKSPSTRPSNFPSRVSLSGKPDP 60
           MPIF ATTL  LSA SFLSL  S DAS+S STSFLL  KSPS RPSNF +RVSLSGKP+P
Sbjct: 47  MPIFAATTLGSLSAHSFLSLSASADASNSLSTSFLLTHKSPSKRPSNFAARVSLSGKPEP 106

Query: 61  LAAGLLDTSPSSPESLRRARRSADWKAAREFLDNGFIYEGRIEGSNAGGLLVRFYSLMGF 120
           + AG+L++SPSSPES+RRARRSADWK ARE+LD+GFI++GRIEGSNAGGLLVRFYSL+GF
Sbjct: 107 I-AGVLESSPSSPESVRRARRSADWKTAREYLDSGFIFKGRIEGSNAGGLLVRFYSLVGF 166

Query: 121 LPFPQLSPSHSCKEPYKSIQDIAKSLIGSLIPVKRVPDVSSFHLAPSKPLPNCTDSSKPV 180
           LPFP LSP+HSCKEPYKSIQDIAKSLIGSLIPVK                          
Sbjct: 167 LPFPLLSPAHSCKEPYKSIQDIAKSLIGSLIPVK-------------------------- 226

Query: 181 NTAHLAAGTVIHCLVPSWDSEVISSNQPLVIQADERNKKLIFSEKEAAWSKFSEQVGVGD 240
                                        VIQADE+NK LIFSEKEAAWSKFSE+VGVGD
Sbjct: 227 -----------------------------VIQADEKNKNLIFSEKEAAWSKFSEKVGVGD 286

Query: 241 VYEARVGSVEDYGAFVHLRFSDGNILCSIKLLILFADVFRNKLPLTFQNSAGLYHLTGLV 300
           VYEARVGS+EDYGAFVHLRFSD                             GLYHLTGLV
Sbjct: 287 VYEARVGSLEDYGAFVHLRFSD-----------------------------GLYHLTGLV 346

Query: 301 HVSEVSWDLVQDVRDILSEGDEVTVKVINVDRQIGKLVSKDKSRITLSIKQLEEDPLLET 360
           H+SEVSWDLVQDVRDILSEGDEV VKVI+VDR        DKSRITLSIKQLEEDPLLET
Sbjct: 347 HISEVSWDLVQDVRDILSEGDEVRVKVIDVDR--------DKSRITLSIKQLEEDPLLET 406

Query: 361 LDKVIPQDGSAEPDSFGPKSDSEIIPLPGLETIIEELLQEDGLNISIVDVRVNRQGFEKR 420
           LDKVIPQD SAEPDSFGPKSDSEIIPLPGL+TI EELLQE+G    I DV +NRQGFEKR
Sbjct: 407 LDKVIPQDDSAEPDSFGPKSDSEIIPLPGLDTIFEELLQEEG----IEDVHINRQGFEKR 425

Query: 421 VVSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQLTTSLDQEGIKRALQRVLERVP 476
           VVSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQLTTSLDQEGIKRALQRVLERVP
Sbjct: 467 VVSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQLTTSLDQEGIKRALQRVLERVP 425

[Close]

BLAST of CaUC07G139150 vs. ExPASy Swiss-Prot
Match: Q9JZ44 (30S ribosomal protein S1 OS=Neisseria meningitidis serogroup B (strain MC58) OX=122586 GN=rpsA PE=1 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 2.9e-10
Identity = 73/286 (25.52%), Postives = 103/286 (36.01%), Query Frame = 0


Query: 74  SLRRARRSADWKAAREFLDNGFIYEGRIEGSNAGGLLVRFYSLMGFLPFPQLSPSHSCKE 133
           S  +A+R+ADW A  E ++NG I  G I G   GGL V   S+  FLP            
Sbjct: 86  SREKAKRAADWIALEEAMENGDILSGIINGKVKGGLTVMISSIRAFLP------------ 145

Query: 134 PYKSIQDIAKSLIGSLIPVKRVPDVSSFHLAPSKPLPNCTDSSKPVNTAHLAAGTVIHCL 193
                        GSL+ V+ V D S F                         G  I   
Sbjct: 146 -------------GSLVDVRPVKDTSHFE------------------------GKEIEFK 205

Query: 194 VPSWDSE----VISSNQPLVIQADERNKKLIFSEKEAAWSKFSEQVGVGDVYEARVGSVE 253
           V   D +    V+S    L     E  K L+            E +  G V +  V ++ 
Sbjct: 206 VIKLDKKRNNVVVSRRAVLEATLGEERKALL------------ENLQEGSVIKGIVKNIT 265

Query: 254 DYGAFVHLRFSDGNILCSIKLLILFADVFRNKLPLTFQNSAGLYHLTGLVHVSEVSWDLV 313
           DYGAFV L   D                                   GL+H+++++W  V
Sbjct: 266 DYGAFVDLGGID-----------------------------------GLLHITDLAWRRV 267

Query: 314 QDVRDILSEGDEVTVKVINVDRQIGKLVSKDKSRITLSIKQLEEDP 356
           +   ++L  G EV  KV+  D        ++K R++L +KQL EDP
Sbjct: 326 KHPSEVLEVGQEVEAKVLKFD--------QEKQRVSLGMKQLGEDP 267

[Close]

BLAST of CaUC07G139150 vs. ExPASy Swiss-Prot
Match: P50889 (30S ribosomal protein S1 OS=Leuconostoc lactis OX=1246 GN=rps1 PE=2 SV=2)

HSP 1 Score: 62.8 bits (151), Expect = 1.2e-08
Identity = 50/162 (30.86%), Postives = 73/162 (45.06%), Query Frame = 0


Query: 209 VIQADERNKKLIFSEKEAAWSKFSEQ-------VGVGDVYEARVGSVEDYGAFVHLRFSD 268
           VI+ D  N +LI S K  A  + + Q       + VG+V E  V  + D+GAFV L   D
Sbjct: 195 VIEIDPANARLILSRKAVAAQELAAQLAEVFSKLSVGEVVEGTVARLTDFGAFVDLGGVD 254

Query: 269 GNILCSIKLLILFADVFRNKLPLTFQNSAGLYHLTGLVHVSEVSWDLVQDVRDILSEGDE 328
                                              GLVHVSE+S D V++  D+L++GD+
Sbjct: 255 -----------------------------------GLVHVSEISHDRVKNPADVLTKGDK 313

Query: 329 VTVKVINVDRQIGKLVSKDKSRITLSIKQLEEDPLLETLDKV 364
           V VK++ +D         +K RI+LSIK  +  P  E  D++
Sbjct: 315 VDVKILALD--------TEKGRISLSIKATQRGPWDEAADQI 313

[Close]

BLAST of CaUC07G139150 vs. ExPASy Swiss-Prot
Match: Q8DWB2 (Polyribonucleotide nucleotidyltransferase OS=Streptococcus mutans serotype c (strain ATCC 700610 / UA159) OX=210007 GN=pnp PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 2.3e-07
Identity = 47/153 (30.72%), Postives = 65/153 (42.48%), Query Frame = 0


Query: 210 IQADERNKKLIFSEKEAAWSKFSE-------QVGVGDVYEARVGSVEDYGAFVHLRFSDG 269
           I  DE     I+S  + A ++  E       +  VG++YEA V  +E +GAFVHL     
Sbjct: 590 IDIDEDGNIAIYSSDQEAINRTKEIIASLVREAKVGEIYEAEVVRIEKFGAFVHL----- 649

Query: 270 NILCSIKLLILFADVFRNKLPLTFQNSAGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEV 329
                                  F  +        LVH+SE++W     V D+L+ GD+V
Sbjct: 650 -----------------------FDKT------DALVHISEIAWTRTNKVEDVLAVGDKV 699

Query: 330 TVKVINVDRQIGKLVSKDKSRITLSIKQLEEDP 356
           TVKV+ VD         DK RI  S+K L   P
Sbjct: 710 TVKVVKVD---------DKGRIDASMKALLPRP 699

[Close]

BLAST of CaUC07G139150 vs. ExPASy Swiss-Prot
Match: Q9HZ71 (30S ribosomal protein S1 OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=rpsA PE=3 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 1.1e-06
Identity = 60/236 (25.42%), Postives = 97/236 (41.10%), Query Frame = 0


Query: 209 VIQADERNKKLIFSEKEA---AWSKFSEQVGVGDVYEARVGSVEDYGAF----------V 268
           V+  DE  +++    K+     W  FS Q   GD     + S+ D+G F          V
Sbjct: 332 VLDIDEERRRISLGIKQCKSNPWEDFSSQFNKGDRISGTIKSITDFGIFIGLDGGIDGLV 391

Query: 269 HL--------------RFSDGNILCSIKLLILFADVFRNKLPL--------TFQNSAGLY 328
           HL              RF  G+    ++ +IL  D  R ++ L         F N A L+
Sbjct: 392 HLSDISWNEVGEEAVRRFKKGD---ELETVILSVDPERERISLGIKQLEDDPFSNYASLH 451

Query: 329 H------------------------LTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINV 385
                                    + G++  SE+S D V+D R++L EG+EV  K+I++
Sbjct: 452 EKGSIVRGTVKEVDAKGAVISLGDDIEGILKASEISRDRVEDARNVLKEGEEVEAKIISI 511

[Close]

BLAST of CaUC07G139150 vs. ExPASy Swiss-Prot
Match: Q93VC7 (30S ribosomal protein S1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPS1 PE=1 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 2.0e-06
Identity = 44/157 (28.03%), Postives = 71/157 (45.22%), Query Frame = 0


Query: 200 EVISSNQPL-VIQADERNKKLIFSEKEAAWSKFSEQVGVGDVYEARVGSVEDYGAFVHLR 259
           E++    PL  ++ DE   KL+ S ++A  +    Q+G+G V    V S++ YGAF+ + 
Sbjct: 226 ELLEKEIPLKFVEVDEEQTKLVLSNRKAV-ADSQAQLGIGSVVLGVVQSLKPYGAFIDI- 285

Query: 260 FSDGNILCSIKLLILFADVFRNKLPLTFQNSAGLYHLTGLVHVSEVSWDLVQDVRDILSE 319
              G I                                GL+HVS++S D V D+  +L  
Sbjct: 286 ---GGI-------------------------------NGLLHVSQISHDRVSDIATVLQP 338

Query: 320 GDEVTVKVINVDRQIGKLVSKDKSRITLSIKQLEEDP 356
           GD + V +++ DR        D+ R++LS K+LE  P
Sbjct: 346 GDTLKVMILSHDR--------DRGRVSLSTKKLEPTP 338

[Close]

BLAST of CaUC07G139150 vs. ExPASy TrEMBL
Match: A0A6J1IUF3 (uncharacterized protein LOC111479406 OS=Cucurbita maxima OX=3661 GN=LOC111479406 PE=4 SV=1)

HSP 1 Score: 587.8 bits (1514), Expect = 4.1e-164
Identity = 336/476 (70.59%), Postives = 358/476 (75.21%), Query Frame = 0


Query: 1   MPIF-ATTLPFLSAPSFLSLFPSIDASHSPSTSFLLPLKSPSTRPSNFPSRVSLSGKPDP 60
           MPIF ATTL  LSA SFLSL  S DASHS S+SF+L  KSPS RPSNF +RVSLSGKP+P
Sbjct: 1   MPIFAATTLGSLSAHSFLSLLASTDASHSLSSSFVLTHKSPSKRPSNFAARVSLSGKPEP 60

Query: 61  LAAGLLDTSPSSPESLRRARRSADWKAAREFLDNGFIYEGRIEGSNAGGLLVRFYSLMGF 120
           + AG+L++SPSSPES+RRARRSADWK ARE+LD+GFI++GRIEGSNAGGLLVRFYSL+GF
Sbjct: 61  I-AGVLESSPSSPESVRRARRSADWKTAREYLDSGFIFKGRIEGSNAGGLLVRFYSLVGF 120

Query: 121 LPFPQLSPSHSCKEPYKSIQDIAKSLIGSLIPVKRVPDVSSFHLAPSKPLPNCTDSSKPV 180
           LPFP LSP+HSCKEPYKSIQDIAKSLIGSLIPVK                          
Sbjct: 121 LPFPLLSPAHSCKEPYKSIQDIAKSLIGSLIPVK-------------------------- 180

Query: 181 NTAHLAAGTVIHCLVPSWDSEVISSNQPLVIQADERNKKLIFSEKEAAWSKFSEQVGVGD 240
                                        VIQADE+NK LIFSEKEAAWSKFSEQVGVGD
Sbjct: 181 -----------------------------VIQADEKNKNLIFSEKEAAWSKFSEQVGVGD 240

Query: 241 VYEARVGSVEDYGAFVHLRFSDGNILCSIKLLILFADVFRNKLPLTFQNSAGLYHLTGLV 300
           VYEARVGSVEDYGAFVHLRFSD                             G YHLTGLV
Sbjct: 241 VYEARVGSVEDYGAFVHLRFSD-----------------------------GFYHLTGLV 300

Query: 301 HVSEVSWDLVQDVRDILSEGDEVTVKVINVDRQIGKLVSKDKSRITLSIKQLEEDPLLET 360
           H+SEVSWDLVQDVRDILSEGDEV VKV++VDR        DKSRITLSIKQLEEDPLLET
Sbjct: 301 HISEVSWDLVQDVRDILSEGDEVRVKVLDVDR--------DKSRITLSIKQLEEDPLLET 360

Query: 361 LDKVIPQDGSAEPDSFGPKSDSEIIPLPGLETIIEELLQEDGLNISIVDVRVNRQGFEKR 420
           LDKVIPQD SAEPDSFGPKSDSEIIPLPGL+TI EELLQE+G    I DV +NRQGFEKR
Sbjct: 361 LDKVIPQDDSAEPDSFGPKSDSEIIPLPGLDTIFEELLQEEG----IEDVHINRQGFEKR 379

Query: 421 VVSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQLTTSLDQEGIKRALQRVLERVP 476
           VVSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQLTTSLDQEGIKRALQRVLERVP
Sbjct: 421 VVSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQLTTSLDQEGIKRALQRVLERVP 379

[Close]

BLAST of CaUC07G139150 vs. ExPASy TrEMBL
Match: A0A6J1GVD7 (LOW QUALITY PROTEIN: uncharacterized protein LOC111457527 OS=Cucurbita moschata OX=3662 GN=LOC111457527 PE=4 SV=1)

HSP 1 Score: 586.6 bits (1511), Expect = 9.0e-164
Identity = 337/476 (70.80%), Postives = 359/476 (75.42%), Query Frame = 0


Query: 1   MPIF-ATTLPFLSAPSFLSLFPSIDASHSPSTSFLLPLKSPSTRPSNFPSRVSLSGKPDP 60
           MPIF ATTL  LSA SFLSL  S DAS+S STSFLL  KSPS RPSNF +RVSLSGKP+P
Sbjct: 47  MPIFAATTLGSLSAHSFLSLSASADASNSLSTSFLLTHKSPSKRPSNFAARVSLSGKPEP 106

Query: 61  LAAGLLDTSPSSPESLRRARRSADWKAAREFLDNGFIYEGRIEGSNAGGLLVRFYSLMGF 120
           + AG+L++SPSSPES+RRARRSADWK ARE+LD+GFI++GRIEGSNAGGLLVRFYSL+GF
Sbjct: 107 I-AGVLESSPSSPESVRRARRSADWKTAREYLDSGFIFKGRIEGSNAGGLLVRFYSLVGF 166

Query: 121 LPFPQLSPSHSCKEPYKSIQDIAKSLIGSLIPVKRVPDVSSFHLAPSKPLPNCTDSSKPV 180
           LPFP LSP+HSCKEPYKSIQDIAKSLIGSLIPVK                          
Sbjct: 167 LPFPLLSPAHSCKEPYKSIQDIAKSLIGSLIPVK-------------------------- 226

Query: 181 NTAHLAAGTVIHCLVPSWDSEVISSNQPLVIQADERNKKLIFSEKEAAWSKFSEQVGVGD 240
                                        VIQADE+NK LIFSEKEAAWSKFSE+VGVGD
Sbjct: 227 -----------------------------VIQADEKNKNLIFSEKEAAWSKFSEKVGVGD 286

Query: 241 VYEARVGSVEDYGAFVHLRFSDGNILCSIKLLILFADVFRNKLPLTFQNSAGLYHLTGLV 300
           VYEARVGS+EDYGAFVHLRFSD                             GLYHLTGLV
Sbjct: 287 VYEARVGSLEDYGAFVHLRFSD-----------------------------GLYHLTGLV 346

Query: 301 HVSEVSWDLVQDVRDILSEGDEVTVKVINVDRQIGKLVSKDKSRITLSIKQLEEDPLLET 360
           H+SEVSWDLVQDVRDILSEGDEV VKVI+VDR        DKSRITLSIKQLEEDPLLET
Sbjct: 347 HISEVSWDLVQDVRDILSEGDEVRVKVIDVDR--------DKSRITLSIKQLEEDPLLET 406

Query: 361 LDKVIPQDGSAEPDSFGPKSDSEIIPLPGLETIIEELLQEDGLNISIVDVRVNRQGFEKR 420
           LDKVIPQD SAEPDSFGPKSDSEIIPLPGL+TI EELLQE+G    I DV +NRQGFEKR
Sbjct: 407 LDKVIPQDDSAEPDSFGPKSDSEIIPLPGLDTIFEELLQEEG----IEDVHINRQGFEKR 425

Query: 421 VVSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQLTTSLDQEGIKRALQRVLERVP 476
           VVSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQLTTSLDQEGIKRALQRVLERVP
Sbjct: 467 VVSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQLTTSLDQEGIKRALQRVLERVP 425

[Close]

BLAST of CaUC07G139150 vs. ExPASy TrEMBL
Match: A0A5A7TNY0 (30S ribosomal protein S1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G003280 PE=4 SV=1)

HSP 1 Score: 581.6 bits (1498), Expect = 2.9e-162
Identity = 340/478 (71.13%), Postives = 356/478 (74.48%), Query Frame = 0


Query: 1   MPIFATTLPFLSAPSFLSLFPSI-DAS--HSPSTSFLLPLKSPSTRPSNFPSRVSLSGKP 60
           MPIF  T+  +S  SFLSL  S  DAS   S S+S +LPLKSPS RPS FPSRVSLSGKP
Sbjct: 1   MPIFLATIASVSTHSFLSLLASTSDASSTSSSSSSSILPLKSPSKRPSIFPSRVSLSGKP 60

Query: 61  DPLAAGLLDTSPSSPESLRRARRSADWKAAREFLDNGFIYEGRIEGSNAGGLLVRFYSLM 120
           DP+ AG+LDT   SPES+RRARRSADWKAARE+LD+GFIYEGRIEGSNAGGLLVRFYSLM
Sbjct: 61  DPI-AGVLDT---SPESVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLM 120

Query: 121 GFLPFPQLSPSHSCKEPYKSIQDIAKSLIGSLIPVKRVPDVSSFHLAPSKPLPNCTDSSK 180
           GFLPFPQLSPSHSCKEP KSIQDIAKSL GSLI VK                        
Sbjct: 121 GFLPFPQLSPSHSCKEPNKSIQDIAKSLTGSLISVK------------------------ 180

Query: 181 PVNTAHLAAGTVIHCLVPSWDSEVISSNQPLVIQADERNKKLIFSEKEAAWSKFSEQVGV 240
                                         +VIQADERNKKLIFSEKEA WSKFS QVGV
Sbjct: 181 ------------------------------VVIQADERNKKLIFSEKEATWSKFSGQVGV 240

Query: 241 GDVYEARVGSVEDYGAFVHLRFSDGNILCSIKLLILFADVFRNKLPLTFQNSAGLYHLTG 300
           GDVYEA+VGS+EDYGAFVHLRFSD                             GLYHLTG
Sbjct: 241 GDVYEAKVGSLEDYGAFVHLRFSD-----------------------------GLYHLTG 300

Query: 301 LVHVSEVSWDLVQDVRDILSEGDEVTVKVINVDRQIGKLVSKDKSRITLSIKQLEEDPLL 360
           LVHVSEVSWDLVQDVRDILSEGDEVTVKVINVDRQ+      DKSRITLSI+QLEEDPLL
Sbjct: 301 LVHVSEVSWDLVQDVRDILSEGDEVTVKVINVDRQV------DKSRITLSIRQLEEDPLL 360

Query: 361 ETLDKVIPQDGSAEPDSFGPKSDSEIIPLPGLETIIEELLQEDGLNISIVDVRVNRQGFE 420
           ETLDKVIPQD SAEPDSFGPKSDSEIIPLPGL TIIEEL QE+G    IVDVRVNRQGFE
Sbjct: 361 ETLDKVIPQDSSAEPDSFGPKSDSEIIPLPGLGTIIEELQQEEG----IVDVRVNRQGFE 381

Query: 421 KRVVSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQLTTSLDQEGIKRALQRVLERVP 476
           KRVVSQDLQLWLSNAPP+EKKFTLLARAGRQVQEIQLTTSLDQEGIKRALQRVLERVP
Sbjct: 421 KRVVSQDLQLWLSNAPPIEKKFTLLARAGRQVQEIQLTTSLDQEGIKRALQRVLERVP 381

[Close]

BLAST of CaUC07G139150 vs. ExPASy TrEMBL
Match: A0A1S3BXL4 (30S ribosomal protein S1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494553 PE=4 SV=1)

HSP 1 Score: 577.0 bits (1486), Expect = 7.2e-161
Identity = 339/478 (70.92%), Postives = 353/478 (73.85%), Query Frame = 0


Query: 1   MPIFATTLPFLSAPSFLSLFPSI-DAS--HSPSTSFLLPLKSPSTRPSNFPSRVSLSGKP 60
           MPIF  T+  +S  SFLSL  S  DAS   S S+S +LPLKSPS RPS FPSRVSLSGKP
Sbjct: 45  MPIFLATIASVSTHSFLSLLASTSDASSTSSSSSSSILPLKSPSKRPSIFPSRVSLSGKP 104

Query: 61  DPLAAGLLDTSPSSPESLRRARRSADWKAAREFLDNGFIYEGRIEGSNAGGLLVRFYSLM 120
           DP+ AG+LDT   SPES+RRARRSADWKAARE+LD+GFIYEGRIEGSNAGGLLVRFYSLM
Sbjct: 105 DPI-AGVLDT---SPESVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLM 164

Query: 121 GFLPFPQLSPSHSCKEPYKSIQDIAKSLIGSLIPVKRVPDVSSFHLAPSKPLPNCTDSSK 180
           GFLPFPQLSPSHSCKEP KSIQDIAKSL GSLI VK                        
Sbjct: 165 GFLPFPQLSPSHSCKEPNKSIQDIAKSLTGSLISVK------------------------ 224

Query: 181 PVNTAHLAAGTVIHCLVPSWDSEVISSNQPLVIQADERNKKLIFSEKEAAWSKFSEQVGV 240
                                          VIQADERNKKLIFSEKEA WSKFS QVGV
Sbjct: 225 -------------------------------VIQADERNKKLIFSEKEATWSKFSGQVGV 284

Query: 241 GDVYEARVGSVEDYGAFVHLRFSDGNILCSIKLLILFADVFRNKLPLTFQNSAGLYHLTG 300
           GDVYEA+VGS+EDYGAFVHLRFSD                             GLYHLTG
Sbjct: 285 GDVYEAKVGSLEDYGAFVHLRFSD-----------------------------GLYHLTG 344

Query: 301 LVHVSEVSWDLVQDVRDILSEGDEVTVKVINVDRQIGKLVSKDKSRITLSIKQLEEDPLL 360
           LVHVSEVSWDLVQDVRDILSEGDEVTVKVINVDR        DKSRITLSI+QLEEDPLL
Sbjct: 345 LVHVSEVSWDLVQDVRDILSEGDEVTVKVINVDR--------DKSRITLSIRQLEEDPLL 404

Query: 361 ETLDKVIPQDGSAEPDSFGPKSDSEIIPLPGLETIIEELLQEDGLNISIVDVRVNRQGFE 420
           ETLDKVIPQD SAEPDSFGPKSDSEIIPLPGL TIIEEL QE+G    IVDVRVNRQGFE
Sbjct: 405 ETLDKVIPQDSSAEPDSFGPKSDSEIIPLPGLGTIIEELQQEEG----IVDVRVNRQGFE 422

Query: 421 KRVVSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQLTTSLDQEGIKRALQRVLERVP 476
           KRVVSQDLQLWLSNAPP+EKKFTLLARAGRQVQEIQLTTSLDQEGIKRALQRVLERVP
Sbjct: 465 KRVVSQDLQLWLSNAPPIEKKFTLLARAGRQVQEIQLTTSLDQEGIKRALQRVLERVP 422

[Close]

BLAST of CaUC07G139150 vs. ExPASy TrEMBL
Match: A0A0A0KTX2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G012510 PE=4 SV=1)

HSP 1 Score: 570.5 bits (1469), Expect = 6.7e-159
Identity = 336/478 (70.29%), Postives = 354/478 (74.06%), Query Frame = 0


Query: 1   MPIFATTLPFLSAPSFLSLFPSI-DAS--HSPSTSFLLPLKSPSTRPSNFPSRVSLSGKP 60
           MPIF  T+  +SA SFLSL  S  DAS   S S+SF+LPLKSPS R S FPSRVSLSGKP
Sbjct: 1   MPIFVATIASVSAHSFLSLLASTSDASSTSSSSSSFILPLKSPSKRSSIFPSRVSLSGKP 60

Query: 61  DPLAAGLLDTSPSSPESLRRARRSADWKAAREFLDNGFIYEGRIEGSNAGGLLVRFYSLM 120
           DP+ AG+LDT   SPES+RRARRSADWKAARE+LD+GFIYEGRIEGSNAGGLLVRFYSL+
Sbjct: 61  DPI-AGVLDT---SPESVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLV 120

Query: 121 GFLPFPQLSPSHSCKEPYKSIQDIAKSLIGSLIPVKRVPDVSSFHLAPSKPLPNCTDSSK 180
           GFLPFPQLSPSHSCKEPYKSIQDIAKSLIGSLI VK                        
Sbjct: 121 GFLPFPQLSPSHSCKEPYKSIQDIAKSLIGSLISVK------------------------ 180

Query: 181 PVNTAHLAAGTVIHCLVPSWDSEVISSNQPLVIQADERNKKLIFSEKEAAWSKFSEQVGV 240
                                          VIQADE+N+KLIFSEKEAA SKFS QV V
Sbjct: 181 -------------------------------VIQADEKNRKLIFSEKEAARSKFSGQVAV 240

Query: 241 GDVYEARVGSVEDYGAFVHLRFSDGNILCSIKLLILFADVFRNKLPLTFQNSAGLYHLTG 300
           GDVYE +VGSVEDYGAFVHLR SD                             GLYHLTG
Sbjct: 241 GDVYEGKVGSVEDYGAFVHLRLSD-----------------------------GLYHLTG 300

Query: 301 LVHVSEVSWDLVQDVRDILSEGDEVTVKVINVDRQIGKLVSKDKSRITLSIKQLEEDPLL 360
           LVHVSEVSWDLVQDVRDILSEGDEVTVKVIN        V+K+KSRITLSI+QLEEDPLL
Sbjct: 301 LVHVSEVSWDLVQDVRDILSEGDEVTVKVIN--------VNKNKSRITLSIRQLEEDPLL 360

Query: 361 ETLDKVIPQDGSAEPDSFGPKSDSEIIPLPGLETIIEELLQEDGLNISIVDVRVNRQGFE 420
           ETLDKVIPQ+ SAEPDSFGPK DSEIIPLPGLETIIEELLQE+G    IVDVRVNRQGFE
Sbjct: 361 ETLDKVIPQESSAEPDSFGPKGDSEIIPLPGLETIIEELLQEEG----IVDVRVNRQGFE 378

Query: 421 KRVVSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQLTTSLDQEGIKRALQRVLERVP 476
           KRVVSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQLTTSLDQEGIKRALQRVLERVP
Sbjct: 421 KRVVSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQLTTSLDQEGIKRALQRVLERVP 378

[Close]

BLAST of CaUC07G139150 vs. TAIR 10
Match: AT3G23700.1 (Nucleic acid-binding proteins superfamily )

HSP 1 Score: 375.6 bits (963), Expect = 6.1e-104
Identity = 236/477 (49.48%), Postives = 280/477 (58.70%), Query Frame = 0


Query: 3   IFATTLPFLSAPSFLSLFPSIDASHSPSTSFLLPLKSPSTRPSNFPSRVS-LSGKPDPLA 62
           +F     FLS P  L L PS  +S S   S +  +KS S+  +    R S  S     L+
Sbjct: 19  LFDQQSTFLSCP--LRLLPSSSSSSSNRNSLVCIVKSFSSSATADTDRNSDQSASSSVLS 78

Query: 63  AG---LLDTSPSSPESLRRARRSADWKAAREFLDNGFIYEGRIEGSNAGGLLVRFYSLMG 122
           A    L DTS  +      A   +DWK A+ +  +G  +EG ++G N GGLL+RF+SL+G
Sbjct: 79  ASNSLLRDTSDEA-----SAAGPSDWKTAKAYCKSGDTFEGEVQGFNGGGLLIRFHSLVG 138

Query: 123 FLPFPQLSPSHSCKEPYKSIQDIAKSLIGSLIPVKRVPDVSSFHLAPSKPLPNCTDSSKP 182
           FLP+PQLSPS SCKEP KSI +IAK+L+GS +PVK                         
Sbjct: 139 FLPYPQLSPSRSCKEPQKSIHEIAKTLVGSKLPVK------------------------- 198

Query: 183 VNTAHLAAGTVIHCLVPSWDSEVISSNQPLVIQADERNKKLIFSEKEAAWSKFSEQVGVG 242
                                         V+QADE N+KLI SEK A W K+S+ V VG
Sbjct: 199 ------------------------------VVQADEENRKLILSEKLALWPKYSQNVNVG 258

Query: 243 DVYEARVGSVEDYGAFVHLRFSDGNILCSIKLLILFADVFRNKLPLTFQNSAGLYHLTGL 302
           DV+  RVGSVEDYGAF+HLRF D                             GLYHLTGL
Sbjct: 259 DVFNGRVGSVEDYGAFIHLRFDD-----------------------------GLYHLTGL 318

Query: 303 VHVSEVSWDLVQDVRDILSEGDEVTVKVINVDRQIGKLVSKDKSRITLSIKQLEEDPLLE 362
           VHVSEVSWD VQDVRD+L +GDEV V V N+D        K+KSRITLSIKQLE+DPLLE
Sbjct: 319 VHVSEVSWDYVQDVRDVLRDGDEVRVIVTNID--------KEKSRITLSIKQLEDDPLLE 378

Query: 363 TLDKVIPQDGSAEPDSFGPKSDSEIIPLPGLETIIEELLQEDGLNISIVDVRVNRQGFEK 422
           TLDKVI +D S    S    +   I PLPGLETI+EELL+EDG+      V++NRQGFEK
Sbjct: 379 TLDKVILKDSSTGSPSLSSNNGDTIEPLPGLETILEELLKEDGIEA----VKINRQGFEK 392

Query: 423 RVVSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQLTTSLDQEGIKRALQRVLERVP 476
           RVVSQDLQLWLSN PP + KF LLARAGRQVQEI LTTSL+Q GIK+ALQ VLERVP
Sbjct: 439 RVVSQDLQLWLSNTPPSDGKFVLLARAGRQVQEIHLTTSLEQGGIKKALQHVLERVP 392

[Close]

BLAST of CaUC07G139150 vs. TAIR 10
Match: AT1G12800.1 (Nucleic acid-binding, OB-fold-like protein )

HSP 1 Score: 75.5 bits (184), Expect = 1.3e-13
Identity = 102/420 (24.29%), Postives = 167/420 (39.76%), Query Frame = 0


Query: 76  RRARRSADWKAAREFLDNGFIYEGRIEGSNAGGLLVRFYSLMGFLPFPQLSPSHS--CKE 135
           R +    DW  A   +      +  +  S+  G  V + SL+GFLP+  L+        E
Sbjct: 406 RSSLEENDWNKAESLVKTELRADVELISSSTRGFAVSYGSLIGFLPYRNLAAKWKFLAFE 465

Query: 136 PYKSIQDIAKSLIGSLIPVKRVPDVSSFHLAPSKPLPNCTDSSKPVNT--AHLAAGTVIH 195
            +   + +  S     + V    DV+S       P P+ +  S+   T    +++   + 
Sbjct: 466 SWLRRKGVDPSPYRQNLGVIGGQDVTS-----KSPSPDSSLDSEVATTINGEVSSDMKLE 525

Query: 196 CLVPSWDSE--------VISSNQPLVIQADERNKKLIFS----EKEAAWSK---FSEQVG 255
            L+  +D E        V    +  V+ A+  ++KLIFS    E E    K      ++ 
Sbjct: 526 DLLMVYDREKQKFLSSFVGQKIKVNVVMANRNSRKLIFSMRPRENEEEVEKKRTLMAKLR 585

Query: 256 VGDVYEARVGSVEDYGAFVHLRFSDGNILCSIKLLILFADVFRNKLPLTFQNSAGLYHLT 315
           VGDV +  +  +  +G F  L                                     + 
Sbjct: 586 VGDVVKCCIKKITYFGIFCELE-----------------------------------GVP 645

Query: 316 GLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVDRQIGKLVSKDKSRITLSIKQLEEDPL 375
            LVH SEVSWD   D       G  V  KV  +D  +         RI LS+K++  DPL
Sbjct: 646 ALVHQSEVSWDATLDPASYFKIGQIVEAKVHQLDFAL--------ERIFLSLKEITPDPL 705

Query: 376 LETLDKVIPQDGSAEPDSFGPKSDSEIIPL--PGLETIIEELLQEDGLNISIVDVRVNRQ 435
            E L+ V+  D     D  G +  +  +    P +E++I+EL   +G+  S+   R    
Sbjct: 706 TEALESVVGGDN----DQLGGRLQAAELDAEWPDVESLIKELEMVEGIQ-SVSKSRF--- 765

Query: 436 GFEKRVVSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQLTTSLDQEGIKRALQRVLERV 475
            F    ++   Q+++  AP  E ++ LLARAG +VQE+ +  SL +E +K  +     RV
Sbjct: 766 -FLSPGLAPTFQVYM--APMFENQYKLLARAGNRVQELIVEASLSKEEMKSTIMSCTNRV 766

[Close]

BLAST of CaUC07G139150 vs. TAIR 10
Match: AT5G30510.1 (ribosomal protein S1 )

HSP 1 Score: 55.5 bits (132), Expect = 1.4e-07
Identity = 44/157 (28.03%), Postives = 71/157 (45.22%), Query Frame = 0


Query: 200 EVISSNQPL-VIQADERNKKLIFSEKEAAWSKFSEQVGVGDVYEARVGSVEDYGAFVHLR 259
           E++    PL  ++ DE   KL+ S ++A  +    Q+G+G V    V S++ YGAF+ + 
Sbjct: 226 ELLEKEIPLKFVEVDEEQTKLVLSNRKAV-ADSQAQLGIGSVVLGVVQSLKPYGAFIDI- 285

Query: 260 FSDGNILCSIKLLILFADVFRNKLPLTFQNSAGLYHLTGLVHVSEVSWDLVQDVRDILSE 319
              G I                                GL+HVS++S D V D+  +L  
Sbjct: 286 ---GGI-------------------------------NGLLHVSQISHDRVSDIATVLQP 338

Query: 320 GDEVTVKVINVDRQIGKLVSKDKSRITLSIKQLEEDP 356
           GD + V +++ DR        D+ R++LS K+LE  P
Sbjct: 346 GDTLKVMILSHDR--------DRGRVSLSTKKLEPTP 338

The following BLAST results are available for this feature:

BLAST of CaUC07G139150 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038897871.1	9.2e-171	74.11	30S ribosomal protein S1 homolog B [Benincasa hispida]	[more]
XP_023526022.1	6.4e-164	71.01	LOW QUALITY PROTEIN: uncharacterized protein LOC111789621 [Cucurbita pepo subsp....	[more]
KAG7018465.1	8.4e-164	71.01	30S ribosomal protein S1, chloroplastic [Cucurbita argyrosperma subsp. argyrospe...	[more]
XP_022979820.1	8.4e-164	70.59	uncharacterized protein LOC111479406 [Cucurbita maxima]	[more]
XP_022955545.1	1.9e-163	70.80	LOW QUALITY PROTEIN: uncharacterized protein LOC111457527 [Cucurbita moschata]	[more]

BLAST of CaUC07G139150 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9JZ44	2.9e-10	25.52	30S ribosomal protein S1 OS=Neisseria meningitidis serogroup B (strain MC58) OX=...	[more]
P50889	1.2e-08	30.86	30S ribosomal protein S1 OS=Leuconostoc lactis OX=1246 GN=rps1 PE=2 SV=2	[more]
Q8DWB2	2.3e-07	30.72	Polyribonucleotide nucleotidyltransferase OS=Streptococcus mutans serotype c (st...	[more]
Q9HZ71	1.1e-06	25.42	30S ribosomal protein S1 OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 2264...	[more]
Q93VC7	2.0e-06	28.03	30S ribosomal protein S1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPS1 ...	[more]

BLAST of CaUC07G139150 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IUF3	4.1e-164	70.59	uncharacterized protein LOC111479406 OS=Cucurbita maxima OX=3661 GN=LOC111479406...	[more]
A0A6J1GVD7	9.0e-164	70.80	LOW QUALITY PROTEIN: uncharacterized protein LOC111457527 OS=Cucurbita moschata ...	[more]
A0A5A7TNY0	2.9e-162	71.13	30S ribosomal protein S1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]
A0A1S3BXL4	7.2e-161	70.92	30S ribosomal protein S1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494553 PE=4...	[more]
A0A0A0KTX2	6.7e-159	70.29	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G012510 PE=4 SV=1	[more]

BLAST of CaUC07G139150 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G23700.1	6.1e-104	49.48	Nucleic acid-binding proteins superfamily	[more]
AT1G12800.1	1.3e-13	24.29	Nucleic acid-binding, OB-fold-like protein	[more]
AT5G30510.1	1.4e-07	28.03	ribosomal protein S1	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022967	RNA-binding domain, S1	SMART	SM00316	S1_6	coord: 236..349 e-value: 1.3E-9 score: 47.9
None	No IPR available	GENE3D	2.40.50.140		coord: 233..357 e-value: 1.2E-21 score: 78.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..57
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..52
None	No IPR available	PANTHER	PTHR47559	OS03G0844900 PROTEIN	coord: 209..263 coord: 287..475 coord: 22..155
IPR003029	S1 domain	PFAM	PF00575	S1	coord: 293..336 e-value: 9.8E-9 score: 35.4
IPR003029	S1 domain	PROSITE	PS50126	S1	coord: 238..349 score: 15.431423
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 233..358

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC07G139150.1	CaUC07G139150.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009987	cellular process
cellular_component	GO:0043229	intracellular organelle
cellular_component	GO:0016020	membrane
molecular_function	GO:0003676	nucleic acid binding