CaUC07G137600 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC07G137600
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
LocationCiama_Chr07: 28168520 .. 28169253 (-)
RNA-Seq ExpressionCaUC07G137600
SyntenyCaUC07G137600
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCCATCCTTCTTTCTAAGACCTTCATTCTCTTCTTTTTCATCATCCTCATCTCCTCTTCCCTTCATTCAGGTACTCTTCTCCCTTTAATTTCCCCATTTTCAGTAACTTCATTATTATTGTTAATTCAAGTTTCTACCTACCCATTCCAATTCCTTTAATTACAAGATTAAAGAGAATTAAAGGGGAAAAAAAAAAAAAAGTTGGTTTTGAACAACTCAAAATTCTATACAACCCTTTAACATCCAACAAATAAACTGTTAATATGAAACCAACACGAACCAAAAACAATAATGTCATTTGAACTCATTTCAAATGTGAACCATCATACTTCATTTGATTTTATTTTTTCTTCTTATTATTATTTTTTTGTTATCATTGAGAATAATCTCAATCTTAGAGTAAATACGTGGTTTATGATGATATTCCATTGCAGAAGGAGTTGACGGCCTGAGATTAAAGGAGGGTTTAAATGAAGAACCAAACCCTCGTGGTCAGGTATATTAAGCTAATTAATATATTTTTTTTTTCATTTTTTTAAGCATCAAAAGTTGAATTTATTTAAATTTGGTTGTGTTAATTAATTTAGCAGAGAATTGGGGAAGCAAAAGTGATGAGAAAGGTTTTGGGCATTGAAGCAATGTTGATGGATTATAATGAACCAAGTGCTAACCCAAGTCACGAGCCAAGAAAAGGAATCCCCGGAGGTCGACCAAACTTCAATCCATGA

mRNA sequence

ATGGCTTCCATCCTTCTTTCTAAGACCTTCATTCTCTTCTTTTTCATCATCCTCATCTCCTCTTCCCTTCATTCAGAAGGAGTTGACGGCCTGAGATTAAAGGAGGGTTTAAATGAAGAACCAAACCCTCGTGGTCAGCAGAGAATTGGGGAAGCAAAAGTGATGAGAAAGGTTTTGGGCATTGAAGCAATGTTGATGGATTATAATGAACCAAGTGCTAACCCAAGTCACGAGCCAAGAAAAGGAATCCCCGGAGGTCGACCAAACTTCAATCCATGA

Coding sequence (CDS)

ATGGCTTCCATCCTTCTTTCTAAGACCTTCATTCTCTTCTTTTTCATCATCCTCATCTCCTCTTCCCTTCATTCAGAAGGAGTTGACGGCCTGAGATTAAAGGAGGGTTTAAATGAAGAACCAAACCCTCGTGGTCAGCAGAGAATTGGGGAAGCAAAAGTGATGAGAAAGGTTTTGGGCATTGAAGCAATGTTGATGGATTATAATGAACCAAGTGCTAACCCAAGTCACGAGCCAAGAAAAGGAATCCCCGGAGGTCGACCAAACTTCAATCCATGA

Protein sequence

MASILLSKTFILFFFIILISSSLHSEGVDGLRLKEGLNEEPNPRGQQRIGEAKVMRKVLGIEAMLMDYNEPSANPSHEPRKGIPGGRPNFNP
Homology
BLAST of CaUC07G137600 vs. NCBI nr
Match: KAA0044962.1 (hypothetical protein E6C27_scaffold74G002680 [Cucumis melo var. makuwa] >TYK16508.1 hypothetical protein E5676_scaffold21G003170 [Cucumis melo var. makuwa])

HSP 1 Score: 84.0 bits (206), Expect = 7.6e-13
Identity = 45/61 (73.77%), Postives = 50/61 (81.97%), Query Frame = 0

Query: 31 LRLKEGLNEE-PNPRGQQRIG-EAKVMRKVLG-IEAMLMDYNEPSANPSHEPRKGIPGGR 89
          + LKEGLNEE  NP GQ RIG + KVMRK+LG  E +LMDYNEPSANPSHEPR+G PGGR
Sbjct: 1  MSLKEGLNEEHNNPCGQMRIGRKGKVMRKILGNEEGILMDYNEPSANPSHEPRRGTPGGR 60

BLAST of CaUC07G137600 vs. NCBI nr
Match: KAG6600410.1 (hypothetical protein SDJN03_05643, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 81.3 bits (199), Expect = 4.9e-12
Identity = 46/82 (56.10%), Postives = 56/82 (68.29%), Query Frame = 0

Query: 11 ILFFFIILISSSLHSEGVDGLRLKEGLNEEPNPRGQQRIGEAKVMRKVLGIEAMLMDYNE 70
          I+F F+I  S S  S    G  L+  LNE+PNP  Q+      VMRKVLG++A LMDY+E
Sbjct: 7  IIFTFLIFTSPS--SGRAHGPSLQPDLNEKPNPYSQR-----IVMRKVLGMDATLMDYHE 66

Query: 71 PSANPSHEPRKGIPGGRPNFNP 93
          P ANPSHEPR+G PGGR +FNP
Sbjct: 67 PGANPSHEPRRGSPGGRASFNP 81

BLAST of CaUC07G137600 vs. NCBI nr
Match: KAG6577122.1 (hypothetical protein SDJN03_24696, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 71.2 bits (173), Expect = 5.1e-09
Identity = 32/43 (74.42%), Postives = 36/43 (83.72%), Query Frame = 0

Query: 50 GEAKVMRKVLGIEAMLMDYNEPSANPSHEPRKGIPGGRPNFNP 93
          G  +V RK+LG EA+LMDYNEPSANP HEPRKG PGGR +FNP
Sbjct: 27 GNVQVTRKLLGNEAILMDYNEPSANPRHEPRKGSPGGRASFNP 69

BLAST of CaUC07G137600 vs. NCBI nr
Match: KAG6600409.1 (hypothetical protein SDJN03_05642, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 70.5 bits (171), Expect = 8.7e-09
Identity = 49/87 (56.32%), Postives = 56/87 (64.37%), Query Frame = 0

Query: 1  MASILLSKTFILFFFIILISSSLHSEGVDGLRLKEGLNEEPNPRGQQRIGEAKVMRKVLG 60
          MAS+   KTFI   FI L+    +S   DGLRLKEGL + PNP GQ  I E K +RK+LG
Sbjct: 1  MASMAAFKTFI---FIFLVFICPNSGDADGLRLKEGL-KLPNPCGQVII-EKKGVRKLLG 60

Query: 61 IEAMLMDYNEPSANPSHEPRKGIPGGR 88
           E  L+DY  PS NP HEPR G PGGR
Sbjct: 61 AEE-LLDYASPSHNPRHEPRVGNPGGR 81

BLAST of CaUC07G137600 vs. NCBI nr
Match: KAG6577123.1 (hypothetical protein SDJN03_24697, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 66.6 bits (161), Expect = 1.3e-07
Identity = 41/78 (52.56%), Postives = 48/78 (61.54%), Query Frame = 0

Query: 10 FILFFFIILISSSLHSEGVDGLRLKEGLNEEPNPRGQQRIGEAKVMRKVLGIEAMLMDYN 69
          F  FFFI L+ +  +S   DGL LKEGL + PNP GQ R+ + KV RK+LG E    DY 
Sbjct: 7  FNTFFFIFLLFTYPNSGVADGLNLKEGL-KLPNPCGQVRVEKNKVARKLLGAEE-FSDYA 66

Query: 70 EPSANPSHEPRKGIPGGR 88
           P  N  HEPR G PGGR
Sbjct: 67 SPEHNRRHEPRIGSPGGR 82

BLAST of CaUC07G137600 vs. ExPASy TrEMBL
Match: A0A5A7TNM7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G003170 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 3.7e-13
Identity = 45/61 (73.77%), Postives = 50/61 (81.97%), Query Frame = 0

Query: 31 LRLKEGLNEE-PNPRGQQRIG-EAKVMRKVLG-IEAMLMDYNEPSANPSHEPRKGIPGGR 89
          + LKEGLNEE  NP GQ RIG + KVMRK+LG  E +LMDYNEPSANPSHEPR+G PGGR
Sbjct: 1  MSLKEGLNEEHNNPCGQMRIGRKGKVMRKILGNEEGILMDYNEPSANPSHEPRRGTPGGR 60

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0044962.17.6e-1373.77hypothetical protein E6C27_scaffold74G002680 [Cucumis melo var. makuwa] >TYK1650... [more]
KAG6600410.14.9e-1256.10hypothetical protein SDJN03_05643, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6577122.15.1e-0974.42hypothetical protein SDJN03_24696, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6600409.18.7e-0956.32hypothetical protein SDJN03_05642, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6577123.11.3e-0752.56hypothetical protein SDJN03_24697, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7TNM73.7e-1373.77Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 69..92

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC07G137600.1CaUC07G137600.1mRNA