CaUC07G136570 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TCTTTTAAAATCCCATGTAACGCTCCTCTCTGTAAAATGGGAATGCATTAGGAAAGGGGAAAGCAAAGACTTTAAAAGAACCTAACCCCAAAGAAATCAAATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTCCCAAGCAATCTCCTTAAACCCTAACCTCTTCCCTTTCTGATTTGCATCGGATTTGAATTTGGTGTTTGCTCCGTGGACGAAGGCCTTCTTTAGGAATTAGCTTCTGCAAGCCACTACCCGGAGACCATGTCTGCTGTGGTGTGCGGTACCAAGAGATCCTTCTTTGAAGAACTCCCGCCTTCCCCTCCCATTGCCAAGCGCCTCCGCTGCTCCACTTCTACTTCTCCGATTCCATTCGCTGCCCCTTCTCATGTTGATCACCTCCACCATTTGTTTCCCCACATGGACCATCAGGTTTCTTCTTTCTTCCTTTTGTTTTTAAATTAACTTTCGCTTCAATTTGATAAACTGTCGTACTGAGATTGCTGGTTGTTTTTGTTTCCTGCGTTGCTTAGTTCCTGCTTGTGTGTAATTTGATACTTCTTGATAGAATAGGATTATAAACTGAATCTATATGGAACTTTTTACAATAGTTTTGGACCTTGGGGGGGAATCATGTTATTCTCTTCTTTTGGATTGTGATTTACCAACTAACTTGAATTAGTTGCGGTATGAAATTGGAGTGGTTCTATTCAGTTTTGATTTGTAATGCATCTCTTTCGGTGTCTTGTTAGATAACTGCTGCACATGTATGTTATAATTAATATTAAGTTTGTTTTTTCCCCAAGGTTTTCTTTATCATGCTTTGATTTTGCCTTTCAGCTTCTTGTGAGAGCCCTTGAAGAATGTGGCAACGACTTGGATGCTGCCATCAGAAGTCTGAGTGACCTGTGTTTGGGGTCTGCTGTTGAGAATCCTGTTACTACTGCAGAACCAGAGAAAAATTTGGATCAAGGTATCACTGAGTGCTAAGTAATGAAGGAGATGCTTCATATGTAGTTCCTTGTTTCTGTTGGCTCATGATTTTAATTATATTATGACGATGAATTTCTTACATTCAAGATTAAATTCCCCCATCAAGGATTTGATGCATGTTTATTTCATAGAAGAGATCTAATGGGTCCCCGTCCCTATAACTTGCTGTCCCTAGTTTGGAATCCTAATTATACCCCTGCCTTGTGCAGGTTAGAGGAAGCTTTAAGTTTTGATTGAAATTTGAAAAACAAGAAACAGAGTTCTCATGCAGAGTACTATGCATCCATTATATTAGAATAAGATGTATTCTTTTCTCGTGTAAGTGACTAAATGCTTTGCTACCTACCCTCCTGTTTGTATTTTTGGTTGATAAGCTTATGTTTACGAAATTGAATTGGCTGGTACATATACATAAACAGTTGGAAAAAAACCTTAAATCTGAATTTCTGGAGATAAAGCTGTATGAGGAGTTATAATCTTCTTTAATTCTTTTGTTATTGATGCTGTATTGCCCCTGATCGTTTTGTAATGTGCTTTTTTCTAGCCTGGACATTTATTTCTAGCTTTTCAGCACTATCTATCGTAATACGTTCTTTTTGGTTCTTTTGATGAAAATACATCTCTGCTTTTTATTAAAAAAAAGCACTATCTATTGTAAAACTTTGATATTAATGTTGAACTTATCATACAGCTTTTCTGCTGAAAGCACCGTTCTTAACCTTTTGTTGTTAGCCTTGAGCTTTTATCTTATTTCTTTTCTGAAAACATCAGTAATTCAGTGCACGTTTTATAAATTTGCAGGTTCATTTGCTAACAATGGAGAGGCTGCTGCTTCTGTGAATTGTTCAGCACCAAGCAGTGTTTCTCTTGATGGTAGAAAATGGATTGACTTGTTTGTTGTGGAAATGATGAACGCTACCACGATAGCTGATGCTAAGACTCGTGCAGCAAGAGCACTAGAGGCATTAGAGAACTCAATTAGTGAACATGCTGGTGTTGATGCTGCAAAAAATTTCCACAAGGTACTTCAATTTTAGTGCCCACAACTCTAAAAAAGTTTCCACCTCCTTGGGGGACAATTTTTGGATACTAATATGTTTTCGGAGCACTCGAAAGCAGTTAGATTTGGTTTGGGCTTATTTGCTTGTTAAACATGCTATTGCTATAAAGTAATGATCCAGGCTTGTAAACTTATGTTCTTTTCAATCTCACTCAGGAAAATACGCAACTGAAGGAACAAATTGATGTACTTCTACGAGAAAATACAATTCTTAAGCGGGCGGTTGCCATACAACATGAGCGTCAGAAGGAATTTGAGGATAAGAATCTAGAGTTGCAGCACCTTAAACAGATGGTATCTCAATATCAGGAGCAGCTCAGAACCCTAGAGGTCAGAATAAATGTAGAACTATTTTAAGTTCTTCCCCAGTGTTAACTGACCTGTTTTAATTTCTTAAACACGTTCATGTTGATGCAACTTTTCTGACCAGTTGAACAAAAATCCTGTCAATTTGTTACAGATAAACAATTATGCATTGACAATGCATTTGAAGCAGGCTCAACAAAGTAGCTCGATTCCAGGACGCTTCCATCCCGATGTCTTCTAG TCTTTTAAAATCCCATGTAACGCTCCTCTCTGTAAAATGGGAATGCATTAGGAAAGGGGAAAGCAAAGACTTTAAAAGAACCTAACCCCAAAGAAATCAAATTCTTCTTCTTCTTCTCTTTCCCAAGCAATCTCCTTAAACCCTAACCTCTTCCCTTTCTGATTTGCATCGGATTTGAATTTGGTGTTTGCTCCGTGGACGAAGGCCTTCTTTAGGAATTAGCTTCTGCAAGCCACTACCCGGAGACCATGTCTGCTGTGGTGTGCGGTACCAAGAGATCCTTCTTTGAAGAACTCCCGCCTTCCCCTCCCATTGCCAAGCGCCTCCGCTGCTCCACTTCTACTTCTCCGATTCCATTCGCTGCCCCTTCTCATGTTGATCACCTCCACCATTTGTTTCCCCACATGGACCATCAGCTTCTTGTGAGAGCCCTTGAAGAATGTGGCAACGACTTGGATGCTGCCATCAGAAGTCTGAGTGACCTGTGTTTGGGGTCTGCTGTTGAGAATCCTGTTACTACTGCAGAACCAGAGAAAAATTTGGATCAAGGTTCATTTGCTAACAATGGAGAGGCTGCTGCTTCTGTGAATTGTTCAGCACCAAGCAGTGTTTCTCTTGATGGTAGAAAATGGATTGACTTGTTTGTTGTGGAAATGATGAACGCTACCACGATAGCTGATGCTAAGACTCGTGCAGCAAGAGCACTAGAGGCATTAGAGAACTCAATTAGTGAACATGCTGGTGTTGATGCTGCAAAAAATTTCCACAAGGAAAATACGCAACTGAAGGAACAAATTGATGTACTTCTACGAGAAAATACAATTCTTAAGCGGGCGGTTGCCATACAACATGAGCGTCAGAAGGAATTTGAGGATAAGAATCTAGAGTTGCAGCACCTTAAACAGATGGTATCTCAATATCAGGAGCAGCTCAGAACCCTAGAGATAAACAATTATGCATTGACAATGCATTTGAAGCAGGCTCAACAAAGTAGCTCGATTCCAGGACGCTTCCATCCCGATGTCTTCTAG ATGTCTGCTGTGGTGTGCGGTACCAAGAGATCCTTCTTTGAAGAACTCCCGCCTTCCCCTCCCATTGCCAAGCGCCTCCGCTGCTCCACTTCTACTTCTCCGATTCCATTCGCTGCCCCTTCTCATGTTGATCACCTCCACCATTTGTTTCCCCACATGGACCATCAGCTTCTTGTGAGAGCCCTTGAAGAATGTGGCAACGACTTGGATGCTGCCATCAGAAGTCTGAGTGACCTGTGTTTGGGGTCTGCTGTTGAGAATCCTGTTACTACTGCAGAACCAGAGAAAAATTTGGATCAAGGTTCATTTGCTAACAATGGAGAGGCTGCTGCTTCTGTGAATTGTTCAGCACCAAGCAGTGTTTCTCTTGATGGTAGAAAATGGATTGACTTGTTTGTTGTGGAAATGATGAACGCTACCACGATAGCTGATGCTAAGACTCGTGCAGCAAGAGCACTAGAGGCATTAGAGAACTCAATTAGTGAACATGCTGGTGTTGATGCTGCAAAAAATTTCCACAAGGAAAATACGCAACTGAAGGAACAAATTGATGTACTTCTACGAGAAAATACAATTCTTAAGCGGGCGGTTGCCATACAACATGAGCGTCAGAAGGAATTTGAGGATAAGAATCTAGAGTTGCAGCACCTTAAACAGATGGTATCTCAATATCAGGAGCAGCTCAGAACCCTAGAGATAAACAATTATGCATTGACAATGCATTTGAAGCAGGCTCAACAAAGTAGCTCGATTCCAGGACGCTTCCATCCCGATGTCTTCTAG MSAVVCGTKRSFFEELPPSPPIAKRLRCSTSTSPIPFAAPSHVDHLHHLFPHMDHQLLVRALEECGNDLDAAIRSLSDLCLGSAVENPVTTAEPEKNLDQGSFANNGEAAASVNCSAPSSVSLDGRKWIDLFVVEMMNATTIADAKTRAARALEALENSISEHAGVDAAKNFHKENTQLKEQIDVLLRENTILKRAVAIQHERQKEFEDKNLELQHLKQMVSQYQEQLRTLEINNYALTMHLKQAQQSSSIPGRFHPDVF Homology
BLAST of CaUC07G136570 vs. NCBI nr
Match: XP_023528958.1 (uncharacterized protein LOC111791720 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 448.7 bits (1153), Expect = 3.3e-122 Identity = 230/261 (88.12%), Postives = 245/261 (93.87%), Query Frame = 0
BLAST of CaUC07G136570 vs. NCBI nr
Match: XP_038896372.1 (uncharacterized protein LOC120084606 [Benincasa hispida]) HSP 1 Score: 448.4 bits (1152), Expect = 4.3e-122 Identity = 230/260 (88.46%), Postives = 242/260 (93.08%), Query Frame = 0
BLAST of CaUC07G136570 vs. NCBI nr
Match: XP_022955806.1 (uncharacterized protein LOC111457686 [Cucurbita moschata]) HSP 1 Score: 448.4 bits (1152), Expect = 4.3e-122 Identity = 230/261 (88.12%), Postives = 243/261 (93.10%), Query Frame = 0
BLAST of CaUC07G136570 vs. NCBI nr
Match: XP_023528850.1 (uncharacterized protein LOC111791655 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023528851.1 uncharacterized protein LOC111791655 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 448.0 bits (1151), Expect = 5.7e-122 Identity = 230/261 (88.12%), Postives = 243/261 (93.10%), Query Frame = 0
BLAST of CaUC07G136570 vs. NCBI nr
Match: XP_022955509.1 (uncharacterized protein LOC111457514 [Cucurbita moschata]) HSP 1 Score: 448.0 bits (1151), Expect = 5.7e-122 Identity = 229/261 (87.74%), Postives = 245/261 (93.87%), Query Frame = 0
BLAST of CaUC07G136570 vs. ExPASy TrEMBL
Match: A0A6J1GUV7 (uncharacterized protein LOC111457686 OS=Cucurbita moschata OX=3662 GN=LOC111457686 PE=4 SV=1) HSP 1 Score: 448.4 bits (1152), Expect = 2.1e-122 Identity = 230/261 (88.12%), Postives = 243/261 (93.10%), Query Frame = 0
BLAST of CaUC07G136570 vs. ExPASy TrEMBL
Match: A0A6J1GWH1 (uncharacterized protein LOC111457514 OS=Cucurbita moschata OX=3662 GN=LOC111457514 PE=4 SV=1) HSP 1 Score: 448.0 bits (1151), Expect = 2.7e-122 Identity = 229/261 (87.74%), Postives = 245/261 (93.87%), Query Frame = 0
BLAST of CaUC07G136570 vs. ExPASy TrEMBL
Match: A0A0A0KVN0 (CUE domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G006460 PE=4 SV=1) HSP 1 Score: 446.0 bits (1146), Expect = 1.0e-121 Identity = 232/260 (89.23%), Postives = 243/260 (93.46%), Query Frame = 0
BLAST of CaUC07G136570 vs. ExPASy TrEMBL
Match: A0A6J1IXF9 (uncharacterized protein LOC111480055 OS=Cucurbita maxima OX=3661 GN=LOC111480055 PE=4 SV=1) HSP 1 Score: 444.5 bits (1142), Expect = 3.0e-121 Identity = 228/261 (87.36%), Postives = 243/261 (93.10%), Query Frame = 0
BLAST of CaUC07G136570 vs. ExPASy TrEMBL
Match: A0A6J1DJ22 (uncharacterized protein LOC111020986 OS=Momordica charantia OX=3673 GN=LOC111020986 PE=4 SV=1) HSP 1 Score: 440.3 bits (1131), Expect = 5.7e-120 Identity = 225/260 (86.54%), Postives = 240/260 (92.31%), Query Frame = 0
BLAST of CaUC07G136570 vs. TAIR 10
Match: AT5G32440.1 (Ubiquitin system component Cue protein ) HSP 1 Score: 263.1 bits (671), Expect = 2.4e-70 Identity = 148/275 (53.82%), Postives = 195/275 (70.91%), Query Frame = 0
BLAST of CaUC07G136570 vs. TAIR 10
Match: AT5G32440.3 (Ubiquitin system component Cue protein ) HSP 1 Score: 262.7 bits (670), Expect = 3.1e-70 Identity = 149/275 (54.18%), Postives = 197/275 (71.64%), Query Frame = 0
BLAST of CaUC07G136570 vs. TAIR 10
Match: AT1G80040.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin system component Cue (InterPro:IPR003892); BEST Arabidopsis thaliana protein match is: Ubiquitin system component Cue protein (TAIR:AT5G32440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 200.7 bits (509), Expect = 1.5e-51 Identity = 118/262 (45.04%), Postives = 165/262 (62.98%), Query Frame = 0
BLAST of CaUC07G136570 vs. TAIR 10
Match: AT1G80040.3 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: Ubiquitin system component Cue protein (TAIR:AT5G32440.1). ) HSP 1 Score: 194.9 bits (494), Expect = 8.1e-50 Identity = 119/273 (43.59%), Postives = 166/273 (60.81%), Query Frame = 0
BLAST of CaUC07G136570 vs. TAIR 10
Match: AT5G32440.2 (Ubiquitin system component Cue protein ) HSP 1 Score: 142.5 bits (358), Expect = 4.7e-34 Identity = 89/190 (46.84%), Postives = 118/190 (62.11%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|