CaUC07G135910 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC07G135910
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
LocationCiama_Chr07: 26066605 .. 26067370 (-)
RNA-Seq ExpressionCaUC07G135910
SyntenyCaUC07G135910
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATCACTTCCCTTCTTCCTCCTCCTCACCGCCTTTGCTTCTTTTAGCACTCAACCCAATCATACTCAAATCCTTCAAACCCGAAACTCCATTCCATTGCATTACATGTCTTTCCCCCATTTTCCAATGCCGAAATCACTTCCTCTTCTTCGATCCGACCCCTCATCGTCGTTGCTCAAACCATTCTCGCCTCCTTCTCCCGCATTTTAGTCACTCACTCTGCTCTCTCGCTTTCTTTTTCTGTGATTTCAGAGGTAACCTTACTTCTCACCTCTTTATGATTTCATCTCTCATTCTCTGGATCATTCGCATTTGATTGCTCATTTCCTCCGATTTTTGTTTTATTGTGCGTATCAGTTTTTTTTTTTTTGGGATACATAGTTTATGTTTTAGGTAATTCGTTGTTGAAACGATCAATTGTCTTTGCATCGATCGGATTGATTGTTTGCTTTATATTTAATCAACGGTGGTTTGTATAGAAATGTTTTAATCTACGGCGAAGAAATTAAGTTTAGAAGTATTTGAAATTTTTGAATAATCTAATAGTTATATTGATAGATCCTCTAGATTCATAAGGTTTTTATCCTCTCTGCTGATTATTACTGTTATTTAGACATTTACGTTCCTATTGGGTCTTAAGATTGACATGATGACATCCTAATGAAACTCCGGATCTCTTATCGTTTCTGCTTTTGCTGTTTTGGTCTCCAGGGCGTACTAGTCACCGAGTTCCTAATTGGCAATTATTCTACATCTGGTTTTGA

mRNA sequence

ATGAATCACTTCCCTTCTTCCTCCTCCTCACCGCCTTTGCTTCTTTTAGCACTCAACCCAATCATACTCAAATCCTTCAAACCCGAAACTCCATTCCATTGCATTACATGTCTTTCCCCCATTTTCCAATGCCGAAATCACTTCCTCTTCTTCGATCCGACCCCTCATCGTCGTTGCTCAAACCATTCTCGCCTCCTTCTCCCGCATTTTAGTCACTCACTCTGCTCTCTCGCTTTCTTTTTCTGTGATTTCAGAGGGCGTACTAGTCACCGAGTTCCTAATTGGCAATTATTCTACATCTGGTTTTGA

Coding sequence (CDS)

ATGAATCACTTCCCTTCTTCCTCCTCCTCACCGCCTTTGCTTCTTTTAGCACTCAACCCAATCATACTCAAATCCTTCAAACCCGAAACTCCATTCCATTGCATTACATGTCTTTCCCCCATTTTCCAATGCCGAAATCACTTCCTCTTCTTCGATCCGACCCCTCATCGTCGTTGCTCAAACCATTCTCGCCTCCTTCTCCCGCATTTTAGTCACTCACTCTGCTCTCTCGCTTTCTTTTTCTGTGATTTCAGAGGGCGTACTAGTCACCGAGTTCCTAATTGGCAATTATTCTACATCTGGTTTTGA

Protein sequence

MNHFPSSSSSPPLLLLALNPIILKSFKPETPFHCITCLSPIFQCRNHFLFFDPTPHRRCSNHSRLLLPHFSHSLCSLAFFFCDFRGRTSHRVPNWQLFYIWF
Homology
[Close]
BLAST of CaUC07G135910 vs. NCBI nr
Match: KAA0050792.1 (putative plastidic glucose transporter 3 isoform X1 [Cucumis melo var. makuwa] >TYK08554.1 putative plastidic glucose transporter 3 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 63.9 bits (154), Expect = 9.0e-07
Identity = 44/91 (48.35%), Postives = 46/91 (50.55%), Query Frame = 0 

Query: 1   MNHFPSSSSSPPLLLLALNPIILKSFKPETPFHCITC-LSP--IFQCRNHFLFFDPTPHR 60
           MNHFP     P        P  L  F      +CITC LSP  IFQC NHFL FD  PHR
Sbjct: 28  MNHFPLLPPHPFASSFTTQPKPLLKFL--KLHYCITCHLSPFLIFQCWNHFLLFDSIPHR 87

Query: 61  RCSNHSRLLLPHFSHSLCSLAFFFCDF-RGR 88
             S     +  HFS  LC LA FFC F RGR
Sbjct: 88  PSSIRFCFIRLHFSRFLCLLALFFCGFQRGR 116

[Close]
BLAST of CaUC07G135910 vs. ExPASy TrEMBL
Match: A0A0A0L8G0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G485840 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 1.0e-11
Identity = 45/90 (50.00%), Postives = 48/90 (53.33%), Query Frame = 0 

Query: 27  KPETPFHCITCLS---PIFQCRNHFLFFDPTPHRRCSNHSRLLLPHFSHSLCSLAFFFCD 86
           KP    HCITC     PIFQCRNH L F   PH   S     +   FSHSLC LA FFCD
Sbjct: 48  KPLLKLHCITCHPSPFPIFQCRNHSLLFHSIPHPPSSIPFCFIRLPFSHSLCLLALFFCD 107

Query: 87  FR-----------GRTSHRVPNWQLFYIWF 103
           F+           G TS+  PN QLFYIWF
Sbjct: 108 FQRSSKFMSFFSPGLTSYPFPNRQLFYIWF 137

[Close]
BLAST of CaUC07G135910 vs. ExPASy TrEMBL
Match: A0A5D3CBE6 (Putative plastidic glucose transporter 3 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold323G00960 PE=3 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 4.4e-07
Identity = 44/91 (48.35%), Postives = 46/91 (50.55%), Query Frame = 0 

Query: 1   MNHFPSSSSSPPLLLLALNPIILKSFKPETPFHCITC-LSP--IFQCRNHFLFFDPTPHR 60
           MNHFP     P        P  L  F      +CITC LSP  IFQC NHFL FD  PHR
Sbjct: 28  MNHFPLLPPHPFASSFTTQPKPLLKFL--KLHYCITCHLSPFLIFQCWNHFLLFDSIPHR 87

Query: 61  RCSNHSRLLLPHFSHSLCSLAFFFCDF-RGR 88
             S     +  HFS  LC LA FFC F RGR
Sbjct: 88  PSSIRFCFIRLHFSRFLCLLALFFCGFQRGR 116

The following BLAST results are available for this feature:
BLAST of CaUC07G135910 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0050792.19.0e-0748.35putative plastidic glucose transporter 3 isoform X1 [Cucumis melo var. makuwa] >... [more]
BLAST of CaUC07G135910 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CaUC07G135910 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L8G01.0e-1150.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G485840 PE=4 SV=1[more]
A0A5D3CBE64.4e-0748.35Putative plastidic glucose transporter 3 isoform X1 OS=Cucumis melo var. makuwa ... [more]
BLAST of CaUC07G135910 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC07G135910.1CaUC07G135910.1mRNA