CaUC07G135070 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC07G135070
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
Description40S ribosomal protein S3
LocationCiama_Chr07: 25048536 .. 25057241 (+)
RNA-Seq ExpressionCaUC07G135070
SyntenyCaUC07G135070
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGTCCCAAATCAGCAAGAAACGAAAGGTTACTTCCTTCGATTCACAACCAATTAAGAGATGGATCCCCTTTTTCGTTCATCTGACGTGTATTTTGGTTCCTAATTGGATTCAGTTTGTCGCTGATGGAGTTTTCTTCGCTGAGATCAACGAGGTGCTGACCAGAGAGCTCGCTGAGGATGGTTACTCCGGCGTCGAGGTCAGGGTTACGCCGATGCGTACTCAGATTATAATCAGGGCATCACGAACACAAAATGTTCTAGCTTAGAAATTTGTATCTGTTTTTGGTTTCTTATACAAAGCTTTGGGCGGAAAAATTAACAATTCAGATACCATCATGCTCTTTTCTTTTCGATTCTATTTTGGTTAGCTCTACGGATACTGTTTCTGATCAATTCTTTTGTTATTATGACTGATTCTGTTCTAAATAATATAGCAAATGATTCATCCTTAACTTCGCGTACAGAATTGAATATATAGGAAGTTGTAATAGATATTAGGTACTTGTTCAGTACTGTAGTAGTAGCTATTGTTAATATCATGATTTCAAAATTAGTGATTCGAAATTCTTAGTTTCCTCTTCAGTAAGTTAGTTTTGAGCTGTGAATTTGAAATGGATGTAATGGAACGTTTCTGCTTGGATGTGAGTTAGATATGCAAAGCTTTAATGAGTTTCGCATATCTTTGGTAATTTTATTATGAAACATGAAGGATGGCAGGATAAAATGTAAGAGTTCCTCCGTAAATAATGTAGATCAGAAAAATATGTTCTAAATGATATGGAATTATTTAAATATTTTTTCTCAACTACTATTTTTTTTTATACTTAGGAAATAGTCCTTTAATGCAATATTATGGATATTGACAAAATCAACTTTAGTCCAGTGTGTAATAATCCTTGGTGGCATGGTCTAAGGTGTTTCATAGAAAATGTCCAAACATTTGAAGTAGTTACTTGCTATAATAGACCTAGATAGTAATCTATTACGATATTTATCGTAAATAGACTATGTTGTTTTGCTATTATTTGTAAATATTTCAACAATTTTGCATTTAGAATAATTTCTTTAAAATTAATTTAAATTTATTAGTAGATTATTTAGGTTGAGATTATATTCACGTTAGCCATAATATATTAACAATTAAATAGTAATATATTATAAAAACATATAAAATGTATCATAACTAATTTCTAAAAAGGATGGTTGTAAATATAGCAACATTTCTAAAAAAAATTACAAAGAATTTATCAACTATAGAAGTCTACTGTAGATTGATTTTGCTATATTTGTAATTCTTTAAAAATGTTTGTTATACACATGATTATTATTCCTAAAATTGATATTCATTATTATTACCTTTTTTTAAATAAATATATTAAAAATATTTTATTTCCAGTTATTAAAAAATGTCTATTTTGAATTATTTTTAAATTAAAACACACACTAATAATTATAAAAGATAAAAATTGGACCTTTTGAATGAAACTGGGCCTCTCGAAAAGCCCAGTACAGTTCCACCATCTGATTCTCTTAAGACCTACTCTGTCTGGCCTTGCTCTCTTCTTCTCGGCCTGGAGCTTTTCTTCCTTCCCACCTTCTCCGTCTTTCAAGCTCCACAGATCCTCGCCCAGTCGATCACAGTGAGTCATATTCAACTAATTTGCTTCTATCATTTTCTTTCTTTTTCCGGTTGATTTATAGCCTTCTGAATTATCCATTAATAACTATACCTTCCGGTTCGTTGAAGCATATAATTGGACTTAAACTTGAATTCGTAACTATGATCTTCTTTCTCTTATTTTCTTTTGTTATTTTGGAAATTTATCGACCAGCAAAACGGAGACTGGTCGGAAGTTAATACTTCAATGAGGCATTCATTGGTTTCGATCAACTTACATTGTTTGGTGTTGTTTTCTTGAAGGCAAATTCGGTTGAACACAACATATACCTTAATTCTTCTGGCGTTGGTGCTTCGATTGTGGTTTTTCAGTTGAAGACGTAGCAAAATGGGAATCATTGAAAGAATTAAAGAAATCGAGGCCGAGATGGCTCGGACTCAGAAAAATAAGGCCACGGGTACTTGGCTTCATTCATTAATCTGTTGTCATCAGTCTCTTCCTTTTACGTGAGTTGTGCATATACCACAATTTTTGTAATTACTCTTTTTGGTCTAAATGTTCAAAACGGCTTTTTGTATTACTTTCTCAAACCGCAGAATATCATCTTGGTCAGCTCAAGGCAAAGATAGCAAAGTTGAGGACGCAGTTGTTGGAACCTCCAAAAGTATGGATATCTTGTGTTCCTCCATGTCTGCTGATTCTTTCTTTTAGTTTGTAAGCCTTGTTTAAATTAGACCCGAAAGTATGCATCTGCTTCTCCCGTGGTGTACTCACTTATCTAATTGGGAATCGATAGTTTTCTATTTGTTCAAGTGCTTTGTCGAATAGGCACTTGGGGTTGTTTTTGGAACTCCCAAAAGTAATTTCGTCATAGTACAAGTCGTTTTCTGAATAATTCACTCATTATTGGCACCGAGAAGTTAATTCAAAATTTAATTCAATATTGCCTCTTTTAAAACTACTCGAGCAATCCATCTCCTTCTTCTTCGTTCTCTTCTTTTCTCTCCCAAAGAAATTATAAATCCAAACCGTTATTATCAAGTGTTGTGTACTTTTCTTGTACGGTCAACTCCAATCCCAACCTTGTTCTAAATTTAGGCCAAGTTTACTTCCCAGTAAACTAGGAAAATTGGGGTCTATTTAAATACGTTCTCAGAAAACTAGTTAACAATATTATGTGAATTATGAATAATAAAAAAATTCATTACGATTGTAGCAATTTTGATTATGAAGTAGTAAACATAGCCTTAGTTCATATTATACACATTATTGAATGAATTTCATGTGATTAAAGCAGACATTGTTGTACAAGTGTTTCATTACCCAAGTGGAATTAATTTGATGTTATTAATCAGCGTGTTCACGGTTCCCATATTCCTGATTTTATTCCATGCTTAATTTGCCAAGATGCTCTTGGATATTTCTTCTTGGCCCCTTTGTATGGTGGAATTTGTGAAAAATTGACTTTCAAATTTACCATTTTTAAACTGATGCATCCAGGGTTCAAGTGGAGGTGGAGAGGGTTTTGAAGTTACAAAATATGGCCATGGGCGTGTTGCACTCATAGGATTTCCAAGGTTTTTCCTATTTTACACTTTTACCATAGTTATTTCTCTTAGAACTGTAGAAAAGAGATACTTGAATTTGATATGGAAGGAGACACCAGTCTTGATGCTCTGAACAAAACTTGTCCATAAGAAGTTTTGAACCTATATGCTCAGATCTTGCGGATATTCGTCTCCAAACCTTATAGACTTCTTAGTTTTTCTCTTCTTTTCTTTTGATAATAAACAAGAGTTTTGTGTGTCTCATCCTTGTGAAGGGGTATACTAATCTTCTTTGTATTATTCCAATTTTATTGGAGGTCATCTTCCTCGAAGGAAATTCATATGAAACTATTTATTACTTATTATTGTTATGTTTTAAAAAATTAATGTGCTGTCAAATTTTATTAGAATTAAGTTGCAGGTTCTGTTATGCCTTGTATTTGTTACTCATTAAGCAATCCTGGTCTATTCATCTATAGAAAAATATTGTTTTAGTATTAAAGAAATCAACCTGACAAGTTTCCCTTTTCCTTTTGTAGTGTGGGAAAATCCACACTTTTAACAATGTTGACGGGCACCCAATCAGAAGCCGCCTCCTATGAGTTTACAACGCTGACTTGCATCCCTGGGATTATACACTACAATGATACCAAAATTCAGCTGCTTGATCTTCCTGGGATTATTGAAGGTGCTTCTGAAGGAAAGGGGCGTGGTAGACAGGTAAAATAGTTTCTTATTTTTATGTTGTAGGCTTATAGCACACGATTAACCATTTTTAGGTGGTCTAATCTTATAATCTCATGTTTTGTTTATTTTATTTGAAGTGTAATTGGTTATAATCCTTTTGCTTCAGCCATTCAGTCCACTTCCCTTTTAACTATTAAAAACACTGGGTATCATGGATGCTAAATCTTCTTGTACTTTATTTACAGGTTATTGCTGTTTCCAAGTCTTCAGACTTAGTCTTGATGGTTCTTGATGCCTCAAAAGTAAGTCTTAACAAATAACAGCTATATTCTTTTTATGTGCAAGATTTTAACCAAATTTTCTTGTAAATGTTGCATTCAGTAGCTTTGATGTTAACTTCCCAGGATTTATTTTCTTCGCCCACTTTGGGTTTTTTTATGCCCATTTTCTGATCATGATACTCTGGAGGTTGTGGCCTTCTTTCTATTATTTTTTATCAGAGGGTTTGTTTAGGGAGAATGGGATGTTAGGATTTGGAACCCTCTCCCATCTAAGGAGTTCACCTGTCGTTCTTTTTTCCATTTGCTTTGTTCCCTTTCTCCTATTCACGTAGCCTTAGTTTTTCCTTTCTTTGGAAGACTAAAATTCCTTAGAAAGTGAAGTTCTTTGCCTAGCAAATCTTGCATGGGAGAGTGAACACTCGAGATCGTATCTAGCGACACTCTACCTTTGTGTTTCGGTTGCAACAGTGTGTTCTTTGCAGATGTCGTGAGGATCTTGACCATCTCTTATGGAGCACTCTCTTTTGAATTGGTGCTTTAGTGTGTTTGCGGTGTTGTGGGTGTGTAATGGGAATTGTCATTCTTTGATCGAGGAGATTTTGATGAACTCCACCTTTCGTGATAAGGAAAGAGTGTTATGGTAGGCATGTTTCTCAATTTTGTGGGGCAGTGTGACTGGAGAGATTAGTAGGATCTTTAGGGGGTTGAGTGATCTCTAGAAGAGGTCTAGGAGGTTGTGAAGTTTGGCACTCGTCAATTCATGACATGAGCACCAACCTTCTTTTAGTTGTAGGTTGTGGATTCCTTTTGTGGGATCTTTTTTCTAATCCCTCATACATTCTTTTGTTTTCTCAATGAAAGTTTGGTTTCTTATCTTAAAAAAATTCACAGGGAAATCTGGGACAATAACAAGAAAATATCTAATGTAGTCATTGAATTACTATAACTGCATGGTGCATTGGTGCTTATAATTTATTGGATGTGTTTGCTGCTGCCTGCCGTAATTACTTTTGTACTGTTCCGTATTCATGGTAGTTCTAGTTCATTTTCAAGAACTGTTTGAAAGCCTAATCTAATATCAATTCATATTTTCTAGTTGTATATATATTCTTGCATGGTTTTTGTTAAGAGAATGATGTCCCTTCCCAATGATGTGACAGTTACATGGGTCTCTTCACAAGCAATTTTTTCCTTGATTTGCTGGATAGATCTCTATAAGGCCAATATCTTGTTTTTAAAGTTCTTACTATTTGAAAGTGATGACCAACATATGCTATTTTTTTGAATGATTATTTAATCTTATTTGGAACTCTATTGTTTATAATCAGTTCACAAGCACTTTCTGTAATATATTTATTGTAATTTACTTAGTTTAGTTCTTACCTTCTTATGGGTGTAATTTAAGCCAACATTCTCATGAGACACTATTTCTGTGTAATCTCTAGAGCGAGGGCCACCGCCAGATTCTAACAAGAGAGCTGGAAGCAGTGGGTTTGCGTTTGAACAAGAGACCACCTCAAGTAAGTTTTTGGCTTTGCTAGTTTTTTTGCTGGTGTTCCCATTTTTACTTCAATTTGACTGAAATAGAAAATTTTTCTCATTTATCCTTGTCGACCGATTAATCAGTTAGCACCTCAATTATCTCTGTTTTAATTCTTATATGCAGATATATTTCAAGAAGAAAAAAACAGGTGGTATTTCATTCAATAGTACCCTTCCTTTAACTCATGTTGACGAGAAGCTGTGCTATCAAATTCTACACGAGTATAAAATTCACAATGCAGAGGTATAGCTTTCAACTGAAAGTAGGTTACTGGTTTTCACCCTTAATATCTGATCTATGTTCCTTTTATTGGAACCTGCCTTTGATGGCTGAATCATCGGTGATTACTTCCTATGATATTCTCATTTTTTCCCCTTTTGATTTTTTATTTATTGGGAAGCAAGAGAAATCCATATTTCTGAACTGGAAGTCACCGAACTGGTTGAAGATGTGATTGTCCACTGACAGAAGGTGTAGAGTGCATAAAAAAAGCTTACCACCTAGCTATGATTAGAGAGAGTGATTGAAAAACATGTTCCACTAAACTATTTTGGCTTTAGTCTGGCCTTAAAAGAGGCTCATGGTTGGCATCAATGCCGATTTCAAATAGGACAGATCCGACTTATGTCACCCAATCATATTGCAGATTGGCCTTCTTTATTTTTGTTTTTCTTAGAATGATATATTCATGTGCGGAGGGTGGATTCAAATCTACAACCTCATAAAATATGCCTTACCTATTAAGCTAAGTTCATATTTGCATCCTTTTTTAATTTGAACTTACATTTAGGGAAGTTGACTAGTACTAGTAGTATCCATGGCGCTAGGTGGATTCATCCATTTTTGCACTCTTGCTCTCGCATGTGAAATCTCTGATTACTTTCCATTATAGCTGGTAAAATTGATCGTATAGCAATAAGCTTGATAAAGTTGATTGTACTAAAGAGAGTTTATCTCCAAAATTTGAAAATTGATGCTTTGTTCCACTTTGAACTTTTGCCCTTGATTTCCATCTGGAGCCCAGAACACTTGCACAGTTGGATCACCTCTGACAGATGGTTCCAACGTCTAGGTATTTGGAGGTTGACCTTTTGGTTCACGAAGGCTCAAGTAGCATATGTGCACGATTCTTTTTCTTTCTTCTGCATTATTTTATTTTATTTTTTAAAAAAAAATCTGCACAGATAGAAGGTATTAGATTAGTTCCACGCCATTCTTTCGGTATTTGACATATACGCATGCCCACCATGTTGATTTTTTTCCAGGTACTCTTTCGAGAGGATGCCACGGTTGATGATCTTATTGATGTAATTGAGGGGAACCGTAAGTACATGAAGTGTGTGTATGTCTACAACAAGATTGATGTAGTTGGTATTGACGATGTAGACAAATTAGCCCGCCAGCCCAATTCAGTTGTCATTAGTTGTAATCTGAAGGTATGTTCTATCATTTCAGTTTCCACTGAGTTTGAGTGGAGACTTTAATGCCTGCCCGTTGATATCCATGTTGGACCAACATATTAACATGTCTTGCATCCTCGCGCTTGAAATTCTCCATCAGTAATTTAGCTTCTGAGTTTGACTGTAGCATGCTGACGTGCACAATCTTTTTTGGTTTTCTCTAATCTTCTATTTAGTTGTGTAATAAAATATTGCCCAAGAGCCAAAACCTGTAGTTAAAATGCATTCACATCGCATGTCTGGTGTGCACTCAAGGTAGCTTGCAGTACGTTGTTTGAACGTGGCTTGTCCTATATAGATTATAACGAGTTTCTCTTTTCCGTTATTTGGACAGTTGAACTTAGACAGACTACTATCTAGGATGTGGGAGGAGATGGGCCTTGTTAGGGTTTATACCAAGCCTCAAGGCCAGCAACCTGATTTCTCAGATCCAGTTGTTCTTTCTGCTGTATGCCTCACCCTCCCTTTCCCTTCTGAAATCATTTATCGATGTATTTATTTTAATCCTATTCTTATTGCCATTGCTCCATGGATCTAATTTTAGGATAGAGGTGGCTGTACAGTTGAGGACTTCTGCAATCATATCCATAGGAGTTTGGTTAAAGATGTCAAATACGTGCTTGTATGGGGTACAAGTGCACGGCACTATCCGCAGCATTGTGGCCTTGGTCATGTTCTTAATGATGAGGATGTCGTTCAGATTGTTAAGAAAAAGGTACAGAATGTTGTTTGTCTTGGCTAATTTAACTGGGATCATTTCATAGTAATTATTCAAACATTTAGGGACCTAATACATAACTACTCACTTTTCATTAACTATCGTGGGTTGGCCTAGCGGTAAAAAAGGAGACATAGTCTTGATAAATGACTAAGAATTTATGAGTTCAATCCATGGTGGCCACCTACCTAGGATTTAATATCTTTCGAGTTTCCTCAACACCTAAATGTTGTAGGGTCAGGTGGGTTGTCCCATAAGATTAGTTGAGGTGCATGTAAGTTGGTCTAGAGACTCACGAATAAAAAAATGAAACTACTCACTTTTCATTTTGACTATGAAATTAAAGATTTTATTTATTCATGTATTTTGATTGTGTATATGACACCTGCAATTTGAATTTTTCAGGAAAAGGAAGAGGGAGGGAGAGGTCGTTTCAAGTCACATACAACTGGTCCAGCTCGGATATCTGACAGAGAAAAGAAGGCTCCTTTAAAGACATAATTACAACATTAGATGATTTTCAAGTTAATCTGGAGTGCTTGTTTGAAGCAGAAGAGCTACTATTCGTTGAAGATATGTGACATATCCGGTTAGTTTTATGTCCCAATCAATCCATGAAGATTATGATGTGAGATTATTATGTTGCTTTCACTGGCCCCTGCTCAACATCGGCAAATCTTTTTTTAGACCACAATGTATAATTGGAAGATATTGATAAGAAATCCTTTGTACGTTAGATGTTAAGGTGTACTAGAACTACAATTCGATGCCCTGTTCTTAAAATTTATAAATTATGAAAGATATGCCAAAAGTTTTATATTTTGGCTTGATGAAATTTGGTTGCAAT

mRNA sequence

ATGGTGTCCCAAATCAGCAAGAAACGAAAGGTTACTTCCTTCGATTCACAACCAATTAAGAGATGGATCCCCTTTTTCGTTCATCTGACGTGTATTTTGGTTCCTAATTGGATTCAGTTTGTCGCTGATGGAGTTTTCTTCGCTGAGATCAACGAGGTGCTGACCAGAGAGCTCGCTGAGGATGGTTACTCCGGCGTCGAGGTCAGGGTTACGCCGATGCGTACTCAGATTATAATCAGGGCATCACGAACACAAAATACCTACTCTGTCTGGCCTTGCTCTCTTCTTCTCGGCCTGGAGCTTTTCTTCCTTCCCACCTTCTCCGTCTTTCAAGCTCCACAGATCCTCGCCCAGTCGATCACAGCAAATTCGGTTGAACACAACATATACCTTAATTCTTCTGGCGTTGGTGCTTCGATTGTGGTTTTTCAGTTGAAGACGTAGCAAAATGGGAATCATTGAAAGAATTAAAGAAATCGAGGCCGAGATGGCTCGGACTCAGAAAAATAAGGCCACGGAATATCATCTTGGTCAGCTCAAGGCAAAGATAGCAAAGTTGAGGACGCAGTTGTTGGAACCTCCAAAAGGTTCAAGTGGAGGTGGAGAGGGTTTTGAAGTTACAAAATATGGCCATGGGCGTGTTGCACTCATAGGATTTCCAAGTGTGGGAAAATCCACACTTTTAACAATGTTGACGGGCACCCAATCAGAAGCCGCCTCCTATGAGTTTACAACGCTGACTTGCATCCCTGGGATTATACACTACAATGATACCAAAATTCAGCTGCTTGATCTTCCTGGGATTATTGAAGGTGCTTCTGAAGGAAAGGGGCGTGGTAGACAGGTTATTGCTGTTTCCAAGTCTTCAGACTTAGTCTTGATGGTTCTTGATGCCTCAAAAAGCGAGGGCCACCGCCAGATTCTAACAAGAGAGCTGGAAGCAGTGGGTTTGCGTTTGAACAAGAGACCACCTCAAATATATTTCAAGAAGAAAAAAACAGGTGGTATTTCATTCAATAGTACCCTTCCTTTAACTCATGTTGACGAGAAGCTGTGCTATCAAATTCTACACGAGTATAAAATTCACAATGCAGAGGTACTCTTTCGAGAGGATGCCACGGTTGATGATCTTATTGATGTAATTGAGGGGAACCGTAAGTACATGAAGTGTGTGTATGTCTACAACAAGATTGATGTAGTTGGTATTGACGATGTAGACAAATTAGCCCGCCAGCCCAATTCAGTTGTCATTAGTTGTAATCTGAAGTTGAACTTAGACAGACTACTATCTAGGATGTGGGAGGAGATGGGCCTTGTTAGGGTTTATACCAAGCCTCAAGGCCAGCAACCTGATTTCTCAGATCCAGTTGTTCTTTCTGCTGATAGAGGTGGCTGTACAGTTGAGGACTTCTGCAATCATATCCATAGGAGTTTGGTTAAAGATGTCAAATACGTGCTTGTATGGGGTACAAGTGCACGGCACTATCCGCAGCATTGTGGCCTTGGTCATGTTCTTAATGATGAGGATGTCGTTCAGATTGTTAAGAAAAAGGAAAAGGAAGAGGGAGGGAGAGGTCGTTTCAAGTCACATACAACTGGTCCAGCTCGGATATCTGACAGAGAAAAGAAGGCTCCTTTAAAGACATAATTACAACATTAGATGATTTTCAAGTTAATCTGGAGTGCTTGTTTGAAGCAGAAGAGCTACTATTCGTTGAAGATATGTGACATATCCGGTTAGTTTTATGTCCCAATCAATCCATGAAGATTATGATGTGAGATTATTATGTTGCTTTCACTGGCCCCTGCTCAACATCGGCAAATCTTTTTTTAGACCACAATGTATAATTGGAAGATATTGATAAGAAATCCTTTGTACGTTAGATGTTAAGGTGTACTAGAACTACAATTCGATGCCCTGTTCTTAAAATTTATAAATTATGAAAGATATGCCAAAAGTTTTATATTTTGGCTTGATGAAATTTGGTTGCAAT

Coding sequence (CDS)

ATGGTGTCCCAAATCAGCAAGAAACGAAAGGTTACTTCCTTCGATTCACAACCAATTAAGAGATGGATCCCCTTTTTCGTTCATCTGACGTGTATTTTGGTTCCTAATTGGATTCAGTTTGTCGCTGATGGAGTTTTCTTCGCTGAGATCAACGAGGTGCTGACCAGAGAGCTCGCTGAGGATGGTTACTCCGGCGTCGAGGTCAGGGTTACGCCGATGCGTACTCAGATTATAATCAGGGCATCACGAACACAAAATACCTACTCTGTCTGGCCTTGCTCTCTTCTTCTCGGCCTGGAGCTTTTCTTCCTTCCCACCTTCTCCGTCTTTCAAGCTCCACAGATCCTCGCCCAGTCGATCACAGCAAATTCGGTTGAACACAACATATACCTTAATTCTTCTGGCGTTGGTGCTTCGATTGTGGTTTTTCAGTTGAAGACGTAG

Protein sequence

MVSQISKKRKVTSFDSQPIKRWIPFFVHLTCILVPNWIQFVADGVFFAEINEVLTRELAEDGYSGVEVRVTPMRTQIIIRASRTQNTYSVWPCSLLLGLELFFLPTFSVFQAPQILAQSITANSVEHNIYLNSSGVGASIVVFQLKT
Homology
[Close]
BLAST of CaUC07G135070 vs. NCBI nr
Match: RRT44184.1 (hypothetical protein B296_00025724 [Ensete ventricosum] >RZR97180.1 hypothetical protein BHM03_00026314 [Ensete ventricosum])

HSP 1 Score: 105.9 bits (263), Expect = 3.0e-19
Identity = 56/87 (64.37%), Postives = 68/87 (78.16%), Query Frame = 0 

Query: 1  MVSQISKKRKVTSFDSQ-PIKRWIPFFVHLTCILVPNWIQFVADGVFFAEINEVLTRELA 60
          M +Q+SKKRKV++   Q P    + F+     ++   + QFVADGVFFAE+NEVLTRELA
Sbjct: 1  MATQMSKKRKVSNLPIQMPSFPSLRFYFDFGLLISSRFSQFVADGVFFAELNEVLTRELA 60

Query: 61 EDGYSGVEVRVTPMRTQIIIRASRTQN 87
          EDGYSGVEVRVTPMRT+IIIRA+RTQN
Sbjct: 61 EDGYSGVEVRVTPMRTEIIIRATRTQN 87

[Close]
BLAST of CaUC07G135070 vs. NCBI nr
Match: KAF8406838.1 (hypothetical protein HHK36_005959 [Tetracentron sinense])

HSP 1 Score: 97.4 bits (241), Expect = 1.1e-16
Identity = 57/86 (66.28%), Postives = 62/86 (72.09%), Query Frame = 0 

Query: 1  MVSQISKKRKVTSFDSQPIKRWIPFFVHLTCILVPNWIQFVADGVFFAEINEVLTRELAE 60
          M +QISKKRK +   S        FFV L          FVADGVFFAE+NEVLTRELAE
Sbjct: 1  MATQISKKRKASPLFSL-------FFVLL----------FVADGVFFAELNEVLTRELAE 60

Query: 61 DGYSGVEVRVTPMRTQIIIRASRTQN 87
          DGYSGVEVRVTPMRT+IIIRA+RTQN
Sbjct: 61 DGYSGVEVRVTPMRTEIIIRATRTQN 69

[Close]
BLAST of CaUC07G135070 vs. NCBI nr
Match: RZS25761.1 (hypothetical protein BHM03_00059010 [Ensete ventricosum])

HSP 1 Score: 97.1 bits (240), Expect = 1.4e-16
Identity = 58/91 (63.74%), Postives = 68/91 (74.73%), Query Frame = 0 

Query: 1  MVSQISKKRKVTS--FDSQPIKR-WIPFFVHLTCILVPNW--IQFVADGVFFAEINEVLT 60
          M +Q+SKKRKV S  F +    R +I   V  +   +  +   QFVADGVFFAE+NEVLT
Sbjct: 1  MATQMSKKRKVFSLPFGTSSFPRCFIRSCVRRSLHFIDFYPLSQFVADGVFFAELNEVLT 60

Query: 61 RELAEDGYSGVEVRVTPMRTQIIIRASRTQN 87
          RELAEDGYSGVEVRVTPMRT+IIIRA+RTQN
Sbjct: 61 RELAEDGYSGVEVRVTPMRTEIIIRATRTQN 91

[Close]
BLAST of CaUC07G135070 vs. NCBI nr
Match: RRT40025.1 (hypothetical protein B296_00033642 [Ensete ventricosum])

HSP 1 Score: 97.1 bits (240), Expect = 1.4e-16
Identity = 58/91 (63.74%), Postives = 68/91 (74.73%), Query Frame = 0 

Query: 1  MVSQISKKRKVTS--FDSQPIKR-WIPFFVHLTCILVPNW--IQFVADGVFFAEINEVLT 60
          M +Q+SKKRKV S  F +    R +I   V  +   +  +   QFVADGVFFAE+NEVLT
Sbjct: 1  MATQMSKKRKVFSLPFGTSSFPRCFIRSCVRRSLHFIDFYPLSQFVADGVFFAELNEVLT 60

Query: 61 RELAEDGYSGVEVRVTPMRTQIIIRASRTQN 87
          RELAEDGYSGVEVRVTPMRT+IIIRA+RTQN
Sbjct: 61 RELAEDGYSGVEVRVTPMRTEIIIRATRTQN 91

[Close]
BLAST of CaUC07G135070 vs. NCBI nr
Match: KAF8401067.1 (hypothetical protein HHK36_014370 [Tetracentron sinense])

HSP 1 Score: 95.1 bits (235), Expect = 5.3e-16
Identity = 52/86 (60.47%), Postives = 64/86 (74.42%), Query Frame = 0 

Query: 1  MVSQISKKRKVTSFDSQPIKRWIPFFVHLTCILVPNWIQFVADGVFFAEINEVLTRELAE 60
          M SQ+SKK+K++          +  F+         +++FVADGVFFAE+NEVLTRELAE
Sbjct: 1  MASQMSKKKKIS----------LGLFIFY-------FLKFVADGVFFAELNEVLTRELAE 60

Query: 61 DGYSGVEVRVTPMRTQIIIRASRTQN 87
          DGYSGVEVRVTPMRT+IIIRA+RTQN
Sbjct: 61 DGYSGVEVRVTPMRTEIIIRATRTQN 69

[Close]
BLAST of CaUC07G135070 vs. ExPASy Swiss-Prot
Match: Q9SIP7 (40S ribosomal protein S3-1 OS=Arabidopsis thaliana OX=3702 GN=RPS3A PE=1 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.7e-17
Identity = 43/48 (89.58%), Postives = 48/48 (100.00%), Query Frame = 0 

Query: 39 QFVADGVFFAEINEVLTRELAEDGYSGVEVRVTPMRTQIIIRASRTQN 87
          +FVADGVF+AE+NEVLTRELAEDGYSGVEVRVTPMRT+IIIRA+RTQN
Sbjct: 10 KFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQN 57

[Close]
BLAST of CaUC07G135070 vs. ExPASy Swiss-Prot
Match: Q9M339 (40S ribosomal protein S3-2 OS=Arabidopsis thaliana OX=3702 GN=RPS3B PE=1 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.7e-17
Identity = 43/48 (89.58%), Postives = 48/48 (100.00%), Query Frame = 0 

Query: 39 QFVADGVFFAEINEVLTRELAEDGYSGVEVRVTPMRTQIIIRASRTQN 87
          +FVADGVF+AE+NEVLTRELAEDGYSGVEVRVTPMRT+IIIRA+RTQN
Sbjct: 10 KFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQN 57

[Close]
BLAST of CaUC07G135070 vs. ExPASy Swiss-Prot
Match: Q9FJA6 (40S ribosomal protein S3-3 OS=Arabidopsis thaliana OX=3702 GN=RPS3C PE=1 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.7e-17
Identity = 43/48 (89.58%), Postives = 48/48 (100.00%), Query Frame = 0 

Query: 39 QFVADGVFFAEINEVLTRELAEDGYSGVEVRVTPMRTQIIIRASRTQN 87
          +FVADGVF+AE+NEVLTRELAEDGYSGVEVRVTPMRT+IIIRA+RTQN
Sbjct: 10 KFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQN 57

[Close]
BLAST of CaUC07G135070 vs. ExPASy Swiss-Prot
Match: P02350 (40S ribosomal protein S3-A OS=Xenopus laevis OX=8355 GN=rps3-a PE=2 SV=2)

HSP 1 Score: 80.9 bits (198), Expect = 1.3e-14
Identity = 39/48 (81.25%), Postives = 44/48 (91.67%), Query Frame = 0 

Query: 39 QFVADGVFFAEINEVLTRELAEDGYSGVEVRVTPMRTQIIIRASRTQN 87
          +FVADG+F AE+NE LTRELAEDGYSGVEVRVTP RT+III A+RTQN
Sbjct: 10 KFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQN 57

[Close]
BLAST of CaUC07G135070 vs. ExPASy Swiss-Prot
Match: P79891 (40S ribosomal protein S3 OS=Ambystoma mexicanum OX=8296 GN=RPS3 PE=2 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.3e-14
Identity = 39/48 (81.25%), Postives = 44/48 (91.67%), Query Frame = 0 

Query: 39 QFVADGVFFAEINEVLTRELAEDGYSGVEVRVTPMRTQIIIRASRTQN 87
          +FVADG+F AE+NE LTRELAEDGYSGVEVRVTP RT+III A+RTQN
Sbjct: 10 KFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQN 57

[Close]
BLAST of CaUC07G135070 vs. ExPASy TrEMBL
Match: A0A426XXK5 (KH type-2 domain-containing protein OS=Ensete ventricosum OX=4639 GN=B296_00025724 PE=3 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 1.4e-19
Identity = 56/87 (64.37%), Postives = 68/87 (78.16%), Query Frame = 0 

Query: 1  MVSQISKKRKVTSFDSQ-PIKRWIPFFVHLTCILVPNWIQFVADGVFFAEINEVLTRELA 60
          M +Q+SKKRKV++   Q P    + F+     ++   + QFVADGVFFAE+NEVLTRELA
Sbjct: 1  MATQMSKKRKVSNLPIQMPSFPSLRFYFDFGLLISSRFSQFVADGVFFAELNEVLTRELA 60

Query: 61 EDGYSGVEVRVTPMRTQIIIRASRTQN 87
          EDGYSGVEVRVTPMRT+IIIRA+RTQN
Sbjct: 61 EDGYSGVEVRVTPMRTEIIIRATRTQN 87

[Close]
BLAST of CaUC07G135070 vs. ExPASy TrEMBL
Match: A0A426XKP6 (KH type-2 domain-containing protein OS=Ensete ventricosum OX=4639 GN=B296_00033642 PE=3 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 6.7e-17
Identity = 58/91 (63.74%), Postives = 68/91 (74.73%), Query Frame = 0 

Query: 1  MVSQISKKRKVTS--FDSQPIKR-WIPFFVHLTCILVPNW--IQFVADGVFFAEINEVLT 60
          M +Q+SKKRKV S  F +    R +I   V  +   +  +   QFVADGVFFAE+NEVLT
Sbjct: 1  MATQMSKKRKVFSLPFGTSSFPRCFIRSCVRRSLHFIDFYPLSQFVADGVFFAELNEVLT 60

Query: 61 RELAEDGYSGVEVRVTPMRTQIIIRASRTQN 87
          RELAEDGYSGVEVRVTPMRT+IIIRA+RTQN
Sbjct: 61 RELAEDGYSGVEVRVTPMRTEIIIRATRTQN 91

[Close]
BLAST of CaUC07G135070 vs. ExPASy TrEMBL
Match: A0A2P5WPG9 (KH type-2 domain-containing protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA27698 PE=3 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 2.6e-16
Identity = 54/86 (62.79%), Postives = 61/86 (70.93%), Query Frame = 0 

Query: 1  MVSQISKKRKVTSFDSQPIKRWIPFFVHLTCILVPNWIQFVADGVFFAEINEVLTRELAE 60
          M +QISKKRKV   +               C +V     FVADGVF+AE+NEVLTRELAE
Sbjct: 1  MAAQISKKRKVRRVEG------------XRCSIV-----FVADGVFYAELNEVLTRELAE 60

Query: 61 DGYSGVEVRVTPMRTQIIIRASRTQN 87
          DGYSGVEVRVTPMRT+IIIRA+RTQN
Sbjct: 61 DGYSGVEVRVTPMRTEIIIRATRTQN 69

[Close]
BLAST of CaUC07G135070 vs. ExPASy TrEMBL
Match: A0A4D9A6X3 (30S ribosomal protein S3, chloroplastic OS=Salvia splendens OX=180675 GN=RP-S3e PE=3 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 2.6e-16
Identity = 46/54 (85.19%), Postives = 51/54 (94.44%), Query Frame = 0 

Query: 33  LVPNWIQFVADGVFFAEINEVLTRELAEDGYSGVEVRVTPMRTQIIIRASRTQN 87
           L P  ++FVADGVFFAE+NEVLTRELAEDGYSGVEVRVTPMRT+IIIRA+RTQN
Sbjct: 350 LAPAEVEFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQN 403

[Close]
BLAST of CaUC07G135070 vs. ExPASy TrEMBL
Match: A0A444CM74 (KH type-2 domain-containing protein OS=Ensete ventricosum OX=4639 GN=GW17_00051081 PE=3 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 4.4e-16
Identity = 46/62 (74.19%), Postives = 53/62 (85.48%), Query Frame = 0 

Query: 25 FFVHLTCILVPNWIQFVADGVFFAEINEVLTRELAEDGYSGVEVRVTPMRTQIIIRASRT 84
          F+     ++   + QFVADGVFFAE+NEVLTRELAEDGYSGVEVRVTPMRT+IIIRA+RT
Sbjct: 9  FYFDFGLLISSRFSQFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRT 68

Query: 85 QN 87
          QN
Sbjct: 69 QN 70

[Close]
BLAST of CaUC07G135070 vs. TAIR 10
Match: AT2G31610.1 (Ribosomal protein S3 family protein )

HSP 1 Score: 90.5 bits (223), Expect = 1.2e-18
Identity = 43/48 (89.58%), Postives = 48/48 (100.00%), Query Frame = 0 

Query: 39 QFVADGVFFAEINEVLTRELAEDGYSGVEVRVTPMRTQIIIRASRTQN 87
          +FVADGVF+AE+NEVLTRELAEDGYSGVEVRVTPMRT+IIIRA+RTQN
Sbjct: 10 KFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQN 57

[Close]
BLAST of CaUC07G135070 vs. TAIR 10
Match: AT3G53870.1 (Ribosomal protein S3 family protein )

HSP 1 Score: 90.5 bits (223), Expect = 1.2e-18
Identity = 43/48 (89.58%), Postives = 48/48 (100.00%), Query Frame = 0 

Query: 39 QFVADGVFFAEINEVLTRELAEDGYSGVEVRVTPMRTQIIIRASRTQN 87
          +FVADGVF+AE+NEVLTRELAEDGYSGVEVRVTPMRT+IIIRA+RTQN
Sbjct: 10 KFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQN 57

[Close]
BLAST of CaUC07G135070 vs. TAIR 10
Match: AT5G35530.1 (Ribosomal protein S3 family protein )

HSP 1 Score: 90.5 bits (223), Expect = 1.2e-18
Identity = 43/48 (89.58%), Postives = 48/48 (100.00%), Query Frame = 0 

Query: 39 QFVADGVFFAEINEVLTRELAEDGYSGVEVRVTPMRTQIIIRASRTQN 87
          +FVADGVF+AE+NEVLTRELAEDGYSGVEVRVTPMRT+IIIRA+RTQN
Sbjct: 10 KFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQN 57

The following BLAST results are available for this feature:
BLAST of CaUC07G135070 vs. NCBI nr
Match NameE-valueIdentityDescription
RRT44184.13.0e-1964.37hypothetical protein B296_00025724 [Ensete ventricosum] >RZR97180.1 hypothetical... [more]
KAF8406838.11.1e-1666.28hypothetical protein HHK36_005959 [Tetracentron sinense][more]
RZS25761.11.4e-1663.74hypothetical protein BHM03_00059010 [Ensete ventricosum][more]
RRT40025.11.4e-1663.74hypothetical protein B296_00033642 [Ensete ventricosum][more]
KAF8401067.15.3e-1660.47hypothetical protein HHK36_014370 [Tetracentron sinense][more]
BLAST of CaUC07G135070 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SIP71.7e-1789.5840S ribosomal protein S3-1 OS=Arabidopsis thaliana OX=3702 GN=RPS3A PE=1 SV=1[more]
Q9M3391.7e-1789.5840S ribosomal protein S3-2 OS=Arabidopsis thaliana OX=3702 GN=RPS3B PE=1 SV=1[more]
Q9FJA61.7e-1789.5840S ribosomal protein S3-3 OS=Arabidopsis thaliana OX=3702 GN=RPS3C PE=1 SV=1[more]
P023501.3e-1481.2540S ribosomal protein S3-A OS=Xenopus laevis OX=8355 GN=rps3-a PE=2 SV=2[more]
P798911.3e-1481.2540S ribosomal protein S3 OS=Ambystoma mexicanum OX=8296 GN=RPS3 PE=2 SV=1[more]
BLAST of CaUC07G135070 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A426XXK51.4e-1964.37KH type-2 domain-containing protein OS=Ensete ventricosum OX=4639 GN=B296_000257... [more]
A0A426XKP66.7e-1763.74KH type-2 domain-containing protein OS=Ensete ventricosum OX=4639 GN=B296_000336... [more]
A0A2P5WPG92.6e-1662.79KH type-2 domain-containing protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA2... [more]
A0A4D9A6X32.6e-1685.1930S ribosomal protein S3, chloroplastic OS=Salvia splendens OX=180675 GN=RP-S3e ... [more]
A0A444CM744.4e-1674.19KH type-2 domain-containing protein OS=Ensete ventricosum OX=4639 GN=GW17_000510... [more]
BLAST of CaUC07G135070 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G31610.11.2e-1889.58Ribosomal protein S3 family protein [more]
AT3G53870.11.2e-1889.58Ribosomal protein S3 family protein [more]
AT5G35530.11.2e-1889.58Ribosomal protein S3 family protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015946K homology domain-like, alpha/betaGENE3D3.30.300.20coord: 36..89
e-value: 2.1E-21
score: 77.7
NoneNo IPR availablePANTHERPTHR1176030S/40S RIBOSOMAL PROTEIN S3coord: 39..87
NoneNo IPR availablePANTHERPTHR11760:SF4940S RIBOSOMAL PROTEIN S3-2-LIKEcoord: 39..87
IPR009019K homology domain superfamily, prokaryotic typeSUPERFAMILY54814Prokaryotic type KH domain (KH-domain type II)coord: 39..86

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC07G135070.1CaUC07G135070.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0005737 cytoplasm
cellular_component GO:0015935 small ribosomal subunit
molecular_function GO:0019843 rRNA binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0003723 RNA binding