CaUC07G133270 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC07G133270
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
LocationCiama_Chr07: 22448437 .. 22448652 (+)
RNA-Seq ExpressionCaUC07G133270
SyntenyCaUC07G133270
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCATCCCTTGGAGCTTCCTACGCCAAAATTCACCTCCTACAGAAACAACAGAAGGAGAAGCTTGAGAGAATGGAAGCGGATCGATTCTCCCGAGGAGAGGCCGGAACCACCACCAGCTCCACCAGCGGCGGTTCATTGCTTGCAAGGAATAACAAAGTTCACCCGGGAAGCATTGCTCCGGCGGCTCCCGACAGCTACAAAAACAGGACATGA

mRNA sequence

ATGTCATCCCTTGGAGCTTCCTACGCCAAAATTCACCTCCTACAGAAACAACAGAAGGAGAAGCTTGAGAGAATGGAAGCGGATCGATTCTCCCGAGGAGAGGCCGGAACCACCACCAGCTCCACCAGCGGCGGTTCATTGCTTGCAAGGAATAACAAAGTTCACCCGGGAAGCATTGCTCCGGCGGCTCCCGACAGCTACAAAAACAGGACATGA

Coding sequence (CDS)

ATGTCATCCCTTGGAGCTTCCTACGCCAAAATTCACCTCCTACAGAAACAACAGAAGGAGAAGCTTGAGAGAATGGAAGCGGATCGATTCTCCCGAGGAGAGGCCGGAACCACCACCAGCTCCACCAGCGGCGGTTCATTGCTTGCAAGGAATAACAAAGTTCACCCGGGAAGCATTGCTCCGGCGGCTCCCGACAGCTACAAAAACAGGACATGA

Protein sequence

MSSLGASYAKIHLLQKQQKEKLERMEADRFSRGEAGTTTSSTSGGSLLARNNKVHPGSIAPAAPDSYKNRT
Homology
BLAST of CaUC07G133270 vs. NCBI nr
Match: KAE8649159.1 (hypothetical protein Csa_014463, partial [Cucumis sativus])

HSP 1 Score: 110.9 bits (276), Expect = 4.5e-21
Identity = 60/72 (83.33%), Postives = 62/72 (86.11%), Query Frame = 0

Query: 1  MSSLGASYAKIHLLQKQQKEKLERMEADRFSRGEAGTTTSSTSGGSLLARNNKVHPGSIA 60
          MSSLGASYAKIHLLQKQQKEKLERME +RFSRGE  T T S+SGGSLLARN KVHPGSIA
Sbjct: 11 MSSLGASYAKIHLLQKQQKEKLERMEPNRFSRGETATATGSSSGGSLLARNKKVHPGSIA 70

Query: 61 PAAP-DSYKNRT 72
          P    DSYKNRT
Sbjct: 71 PTTTVDSYKNRT 82

BLAST of CaUC07G133270 vs. NCBI nr
Match: KAG6600624.1 (hypothetical protein SDJN03_05857, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 109.0 bits (271), Expect = 1.7e-20
Identity = 61/72 (84.72%), Postives = 64/72 (88.89%), Query Frame = 0

Query: 1  MSSLGASYAKIHLLQKQQKEKLERMEADRFSRGEAGTTTSSTSGGSLLARNNKVHPGSIA 60
          MSS+GASYAKIHLLQKQQKEKLERMEADR SRGEA  T +S+ GGSLLAR NKVHPGSIA
Sbjct: 1  MSSIGASYAKIHLLQKQQKEKLERMEADRISRGEA-VTAASSGGGSLLARKNKVHPGSIA 60

Query: 61 P-AAPDSYKNRT 72
          P AA DSYKNRT
Sbjct: 61 PAAAADSYKNRT 71

BLAST of CaUC07G133270 vs. NCBI nr
Match: KAG6577271.1 (hypothetical protein SDJN03_24845, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 102.4 bits (254), Expect = 1.6e-18
Identity = 57/71 (80.28%), Postives = 61/71 (85.92%), Query Frame = 0

Query: 1  MSSLGASYAKIHLLQKQQKEKLERMEADRFSRGEAGTTTSSTSGGSLLARNNKVHPGSIA 60
          MSS+GASYAKIHLLQKQQK+KLE MEA+R SRGEA   TSS  GGSLLAR+NKVHPGSIA
Sbjct: 1  MSSIGASYAKIHLLQKQQKDKLESMEANRPSRGEAAAATSSGGGGSLLARSNKVHPGSIA 60

Query: 61 PAAPDSYKNRT 72
          P A DS KNRT
Sbjct: 61 PVA-DSNKNRT 70

BLAST of CaUC07G133270 vs. NCBI nr
Match: EOX92223.1 (Uncharacterized protein TCM_001203 [Theobroma cacao])

HSP 1 Score: 57.0 bits (136), Expect = 7.7e-05
Identity = 30/71 (42.25%), Postives = 47/71 (66.20%), Query Frame = 0

Query: 1  MSSLGASYAKIHLLQKQQKEKLERMEADRFSRGEAGTTTSSTSGGSLLARNNKVHPGSIA 60
          MSS+GAS A+++L++K+QKEK++RME +R  RGE  T       G+++ R +KVHPG+  
Sbjct: 1  MSSIGASCAEVYLMRKRQKEKMKRMEEERVKRGETTTGIEERKAGTIVGR-SKVHPGNFT 60

Query: 61 PAAPDSYKNRT 72
            A  +  N +
Sbjct: 61 SPADSAAGNES 70

BLAST of CaUC07G133270 vs. NCBI nr
Match: PON54203.1 (hypothetical protein TorRG33x02_303210 [Trema orientale])

HSP 1 Score: 55.1 bits (131), Expect = 2.9e-04
Identity = 32/67 (47.76%), Postives = 43/67 (64.18%), Query Frame = 0

Query: 1  MSSLGASYAKIHLLQKQQKEKLERMEADRFSRGEAGTTTSSTSGGS-----LLARNNKVH 60
          MSS+GAS A ++++QK+QKEK+ERME +R  RGE+     + SGGS        R+ KVH
Sbjct: 1  MSSIGASCAGVYVMQKRQKEKMERMEEERARRGESQDNKVAGSGGSGGASNTFGRSKKVH 60

Query: 61 PGSIAPA 63
          PG    A
Sbjct: 61 PGKFPGA 67

BLAST of CaUC07G133270 vs. ExPASy TrEMBL
Match: A0A2N9EUS9 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS6201 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 2.8e-05
Identity = 30/57 (52.63%), Postives = 43/57 (75.44%), Query Frame = 0

Query: 1  MSSLGASYAKIHLLQKQQKEKLERMEADRFSRGEAGTTTSSTSGGSLLARNNKVHPG 58
          MSS+GAS A+I++++K+QKEKL+RME +R  +GE+    S  S GS + R+ KVHPG
Sbjct: 1  MSSIGASCAEIYVMRKRQKEKLKRMEEERVRKGESSVEESKVS-GSTIGRSKKVHPG 56

BLAST of CaUC07G133270 vs. ExPASy TrEMBL
Match: A0A061DQL6 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_001203 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 3.7e-05
Identity = 30/71 (42.25%), Postives = 47/71 (66.20%), Query Frame = 0

Query: 1  MSSLGASYAKIHLLQKQQKEKLERMEADRFSRGEAGTTTSSTSGGSLLARNNKVHPGSIA 60
          MSS+GAS A+++L++K+QKEK++RME +R  RGE  T       G+++ R +KVHPG+  
Sbjct: 1  MSSIGASCAEVYLMRKRQKEKMKRMEEERVKRGETTTGIEERKAGTIVGR-SKVHPGNFT 60

Query: 61 PAAPDSYKNRT 72
            A  +  N +
Sbjct: 61 SPADSAAGNES 70

BLAST of CaUC07G133270 vs. ExPASy TrEMBL
Match: A0A2P5BZF9 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_303210 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.4e-04
Identity = 32/67 (47.76%), Postives = 43/67 (64.18%), Query Frame = 0

Query: 1  MSSLGASYAKIHLLQKQQKEKLERMEADRFSRGEAGTTTSSTSGGS-----LLARNNKVH 60
          MSS+GAS A ++++QK+QKEK+ERME +R  RGE+     + SGGS        R+ KVH
Sbjct: 1  MSSIGASCAGVYVMQKRQKEKMERMEEERARRGESQDNKVAGSGGSGGASNTFGRSKKVH 60

Query: 61 PGSIAPA 63
          PG    A
Sbjct: 61 PGKFPGA 67

BLAST of CaUC07G133270 vs. ExPASy TrEMBL
Match: A0A2P5WEM7 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_A11G210100v1 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 2.4e-04
Identity = 32/70 (45.71%), Postives = 48/70 (68.57%), Query Frame = 0

Query: 1  MSSLGASYAKIHLLQKQQKEKLERMEADRFSRGE-AGTTTSSTSGGSLLARNNKVHPGSI 60
          MSS+GAS A+++L++K+QKEK++RME +   RGE +GTT +       ++  NKVHPG+ 
Sbjct: 1  MSSIGASCAEVYLMRKRQKEKMKRMEEESVRRGETSGTTGTIEERKPTVSGRNKVHPGNF 60

Query: 61 APAAPDSYKN 70
            + PDS  N
Sbjct: 61 T-SLPDSAGN 69

BLAST of CaUC07G133270 vs. ExPASy TrEMBL
Match: A0A5D2NCK3 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A11G224200v1 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 2.4e-04
Identity = 32/70 (45.71%), Postives = 48/70 (68.57%), Query Frame = 0

Query: 1  MSSLGASYAKIHLLQKQQKEKLERMEADRFSRGE-AGTTTSSTSGGSLLARNNKVHPGSI 60
          MSS+GAS A+++L++K+QKEK++RME +   RGE +GTT +       ++  NKVHPG+ 
Sbjct: 1  MSSIGASCAEVYLMRKRQKEKMKRMEEESVRRGETSGTTGTIEERKPTVSGRNKVHPGNF 60

Query: 61 APAAPDSYKN 70
            + PDS  N
Sbjct: 61 T-SLPDSAGN 69

BLAST of CaUC07G133270 vs. TAIR 10
Match: AT4G39675.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 40.8 bits (94), Expect = 5.3e-04
Identity = 25/61 (40.98%), Postives = 40/61 (65.57%), Query Frame = 0

Query: 1  MSSLGASYAKIHLLQKQQKEKLERMEADR-FSRGEAGTTTSSTSGGSLLARNNKVHPGSI 60
          MSS+GASYA + ++QK+QKEK++++E +R F   EA      TS  S    +NK++P  +
Sbjct: 1  MSSIGASYAHLQVMQKKQKEKMKKLEKERNFDHDEAHRLPVETSFASGRI-SNKIYPSRL 60

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAE8649159.14.5e-2183.33hypothetical protein Csa_014463, partial [Cucumis sativus][more]
KAG6600624.11.7e-2084.72hypothetical protein SDJN03_05857, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6577271.11.6e-1880.28hypothetical protein SDJN03_24845, partial [Cucurbita argyrosperma subsp. sorori... [more]
EOX92223.17.7e-0542.25Uncharacterized protein TCM_001203 [Theobroma cacao][more]
PON54203.12.9e-0447.76hypothetical protein TorRG33x02_303210 [Trema orientale][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A2N9EUS92.8e-0552.63Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS6201 PE=4 SV=1[more]
A0A061DQL63.7e-0542.25Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_001203 PE=4 SV=1[more]
A0A2P5BZF91.4e-0447.76Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_303210 PE=4 SV... [more]
A0A2P5WEM72.4e-0445.71Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_A11G210100v1 PE... [more]
A0A5D2NCK32.4e-0445.71Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A11G224200v1 P... [more]
Match NameE-valueIdentityDescription
AT4G39675.15.3e-0440.98unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -... [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 33..49
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 14..31
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..71
NoneNo IPR availablePANTHERPTHR34950OS04G0457400 PROTEINcoord: 1..64
NoneNo IPR availablePANTHERPTHR34950:SF2BNAC01G00560D PROTEINcoord: 1..64

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC07G133270.1CaUC07G133270.1mRNA