CaUC07G133270 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCATCCCTTGGAGCTTCCTACGCCAAAATTCACCTCCTACAGAAACAACAGAAGGAGAAGCTTGAGAGAATGGAAGCGGATCGATTCTCCCGAGGAGAGGCCGGAACCACCACCAGCTCCACCAGCGGCGGTTCATTGCTTGCAAGGAATAACAAAGTTCACCCGGGAAGCATTGCTCCGGCGGCTCCCGACAGCTACAAAAACAGGACATGA ATGTCATCCCTTGGAGCTTCCTACGCCAAAATTCACCTCCTACAGAAACAACAGAAGGAGAAGCTTGAGAGAATGGAAGCGGATCGATTCTCCCGAGGAGAGGCCGGAACCACCACCAGCTCCACCAGCGGCGGTTCATTGCTTGCAAGGAATAACAAAGTTCACCCGGGAAGCATTGCTCCGGCGGCTCCCGACAGCTACAAAAACAGGACATGA ATGTCATCCCTTGGAGCTTCCTACGCCAAAATTCACCTCCTACAGAAACAACAGAAGGAGAAGCTTGAGAGAATGGAAGCGGATCGATTCTCCCGAGGAGAGGCCGGAACCACCACCAGCTCCACCAGCGGCGGTTCATTGCTTGCAAGGAATAACAAAGTTCACCCGGGAAGCATTGCTCCGGCGGCTCCCGACAGCTACAAAAACAGGACATGA MSSLGASYAKIHLLQKQQKEKLERMEADRFSRGEAGTTTSSTSGGSLLARNNKVHPGSIAPAAPDSYKNRT Homology
BLAST of CaUC07G133270 vs. NCBI nr
Match: KAE8649159.1 (hypothetical protein Csa_014463, partial [Cucumis sativus]) HSP 1 Score: 110.9 bits (276), Expect = 4.5e-21 Identity = 60/72 (83.33%), Postives = 62/72 (86.11%), Query Frame = 0
BLAST of CaUC07G133270 vs. NCBI nr
Match: KAG6600624.1 (hypothetical protein SDJN03_05857, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 109.0 bits (271), Expect = 1.7e-20 Identity = 61/72 (84.72%), Postives = 64/72 (88.89%), Query Frame = 0
BLAST of CaUC07G133270 vs. NCBI nr
Match: KAG6577271.1 (hypothetical protein SDJN03_24845, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 102.4 bits (254), Expect = 1.6e-18 Identity = 57/71 (80.28%), Postives = 61/71 (85.92%), Query Frame = 0
BLAST of CaUC07G133270 vs. NCBI nr
Match: EOX92223.1 (Uncharacterized protein TCM_001203 [Theobroma cacao]) HSP 1 Score: 57.0 bits (136), Expect = 7.7e-05 Identity = 30/71 (42.25%), Postives = 47/71 (66.20%), Query Frame = 0
BLAST of CaUC07G133270 vs. NCBI nr
Match: PON54203.1 (hypothetical protein TorRG33x02_303210 [Trema orientale]) HSP 1 Score: 55.1 bits (131), Expect = 2.9e-04 Identity = 32/67 (47.76%), Postives = 43/67 (64.18%), Query Frame = 0
BLAST of CaUC07G133270 vs. ExPASy TrEMBL
Match: A0A2N9EUS9 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS6201 PE=4 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 2.8e-05 Identity = 30/57 (52.63%), Postives = 43/57 (75.44%), Query Frame = 0
BLAST of CaUC07G133270 vs. ExPASy TrEMBL
Match: A0A061DQL6 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_001203 PE=4 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 3.7e-05 Identity = 30/71 (42.25%), Postives = 47/71 (66.20%), Query Frame = 0
BLAST of CaUC07G133270 vs. ExPASy TrEMBL
Match: A0A2P5BZF9 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_303210 PE=4 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 1.4e-04 Identity = 32/67 (47.76%), Postives = 43/67 (64.18%), Query Frame = 0
BLAST of CaUC07G133270 vs. ExPASy TrEMBL
Match: A0A2P5WEM7 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_A11G210100v1 PE=4 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 2.4e-04 Identity = 32/70 (45.71%), Postives = 48/70 (68.57%), Query Frame = 0
BLAST of CaUC07G133270 vs. ExPASy TrEMBL
Match: A0A5D2NCK3 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A11G224200v1 PE=4 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 2.4e-04 Identity = 32/70 (45.71%), Postives = 48/70 (68.57%), Query Frame = 0
BLAST of CaUC07G133270 vs. TAIR 10
Match: AT4G39675.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 40.8 bits (94), Expect = 5.3e-04 Identity = 25/61 (40.98%), Postives = 40/61 (65.57%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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