CaUC07G132540 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC07G132540
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Unknown protein
Location	Ciama_Chr07: 20581136 .. 20581870 (-)
RNA-Seq Expression	CaUC07G132540
Synteny	CaUC07G132540

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTTGTTCTTCTTCCACAAAGCAGAGAAGGATTCGACCCCTATTCCCAGATGCAATCTCCTCCATATCTTCGCCAAGTTCTTCCGTCTCCTAGAGCTTTGTTTTCTACTGCTTTTCCTTTCCTGGACCCTCTCTCGCCTTCCAATCGCCCTTAGAATCTCCGGCGAATATTTCGGAAAACTCTTCGGCTTCATCGCCACTCCTCTCTTCGGTTTCCTCCTCTGCAACGCCATCATCGTCGCTCTCGTAGCCAAGCCTTCCCAATTCTCTGCCTGGAGAAGCGCCCAAACCGATCGGCTCTACGAAGACCTAATTGAAAAAACCGGAAACGGAGACCTAACTGATTCGCCCTCGGAGGAAGTGGAGATTGTGTACCAGGACAAACAGATGATTGTGGAGGGGATTAATTCAATGGACAGTGAAATGGAAGTGAAGAACACGGATCTGGAGTCGGAATCAGGATTAGGTCATCCGAAACTGTTAGTGAGGACTCTGTCGGAGAAACTTAACCGAGAATGCGTGAAAACACAGAGTGAGAAGCTCCGGCGATCGGAGACGGAGAAGAGCCGGAATCTGGAGCATTCGCACGACATTTTGTACTACCAGGACGATTTGAGCAGTGAGGAATTTCAGAGGAAGATTGAGGCGTTCATAGCGAAAGAGAAGAAGTTTCGACGGGAAGAATCTTCGGCCATTGTTGTGCTCCACTGCGAAGGGTTAACCTCCGGCTGA

mRNA sequence

ATGGATTTGTTCTTCTTCCACAAAGCAGAGAAGGATTCGACCCCTATTCCCAGATGCAATCTCCTCCATATCTTCGCCAAGTTCTTCCGTCTCCTAGAGCTTTGTTTTCTACTGCTTTTCCTTTCCTGGACCCTCTCTCGCCTTCCAATCGCCCTTAGAATCTCCGGCGAATATTTCGGAAAACTCTTCGGCTTCATCGCCACTCCTCTCTTCGGTTTCCTCCTCTGCAACGCCATCATCGTCGCTCTCGTAGCCAAGCCTTCCCAATTCTCTGCCTGGAGAAGCGCCCAAACCGATCGGCTCTACGAAGACCTAATTGAAAAAACCGGAAACGGAGACCTAACTGATTCGCCCTCGGAGGAAGTGGAGATTGTGTACCAGGACAAACAGATGATTGTGGAGGGGATTAATTCAATGGACAGTGAAATGGAAGTGAAGAACACGGATCTGGAGTCGGAATCAGGATTAGGTCATCCGAAACTGTTAGTGAGGACTCTGTCGGAGAAACTTAACCGAGAATGCGTGAAAACACAGAGTGAGAAGCTCCGGCGATCGGAGACGGAGAAGAGCCGGAATCTGGAGCATTCGCACGACATTTTGTACTACCAGGACGATTTGAGCAGTGAGGAATTTCAGAGGAAGATTGAGGCGTTCATAGCGAAAGAGAAGAAGTTTCGACGGGAAGAATCTTCGGCCATTGTTGTGCTCCACTGCGAAGGGTTAACCTCCGGCTGA

Coding sequence (CDS)

ATGGATTTGTTCTTCTTCCACAAAGCAGAGAAGGATTCGACCCCTATTCCCAGATGCAATCTCCTCCATATCTTCGCCAAGTTCTTCCGTCTCCTAGAGCTTTGTTTTCTACTGCTTTTCCTTTCCTGGACCCTCTCTCGCCTTCCAATCGCCCTTAGAATCTCCGGCGAATATTTCGGAAAACTCTTCGGCTTCATCGCCACTCCTCTCTTCGGTTTCCTCCTCTGCAACGCCATCATCGTCGCTCTCGTAGCCAAGCCTTCCCAATTCTCTGCCTGGAGAAGCGCCCAAACCGATCGGCTCTACGAAGACCTAATTGAAAAAACCGGAAACGGAGACCTAACTGATTCGCCCTCGGAGGAAGTGGAGATTGTGTACCAGGACAAACAGATGATTGTGGAGGGGATTAATTCAATGGACAGTGAAATGGAAGTGAAGAACACGGATCTGGAGTCGGAATCAGGATTAGGTCATCCGAAACTGTTAGTGAGGACTCTGTCGGAGAAACTTAACCGAGAATGCGTGAAAACACAGAGTGAGAAGCTCCGGCGATCGGAGACGGAGAAGAGCCGGAATCTGGAGCATTCGCACGACATTTTGTACTACCAGGACGATTTGAGCAGTGAGGAATTTCAGAGGAAGATTGAGGCGTTCATAGCGAAAGAGAAGAAGTTTCGACGGGAAGAATCTTCGGCCATTGTTGTGCTCCACTGCGAAGGGTTAACCTCCGGCTGA

Protein sequence

MDLFFFHKAEKDSTPIPRCNLLHIFAKFFRLLELCFLLLFLSWTLSRLPIALRISGEYFGKLFGFIATPLFGFLLCNAIIVALVAKPSQFSAWRSAQTDRLYEDLIEKTGNGDLTDSPSEEVEIVYQDKQMIVEGINSMDSEMEVKNTDLESESGLGHPKLLVRTLSEKLNRECVKTQSEKLRRSETEKSRNLEHSHDILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSAIVVLHCEGLTSG

Homology

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BLAST of CaUC07G132540 vs. NCBI nr
Match: XP_038888396.1 (uncharacterized protein LOC120078241 [Benincasa hispida])

HSP 1 Score: 380.2 bits (975), Expect = 1.4e-101
Identity = 201/247 (81.38%), Postives = 219/247 (88.66%), Query Frame = 0


Query: 1   MDLFFFHKAEKDSTPIPRCNLLHIFAKFFRLLELCFLLLFLSWTLSRLPIALRISGEYFG 60
           MD FFF KAEK S PIPRCNLL IFAKFFR LEL FLLLFLSW LSRLPIAL +S EYFG
Sbjct: 1   MDFFFFDKAEKVSNPIPRCNLLQIFAKFFRFLELSFLLLFLSWILSRLPIALTVSAEYFG 60

Query: 61  KLFGFIATPLFGFLLCNAIIVALVAKPSQF-------SAWRSAQTDRLYEDLIEKTGNGD 120
           KLF F+ATPLFGFLLCNAIIVALVAKP+QF       S+  SA+ DR+YEDLIEKTG+GD
Sbjct: 61  KLFAFVATPLFGFLLCNAIIVALVAKPTQFPRPASSTSSTSSAEADRIYEDLIEKTGSGD 120

Query: 121 LTDSPSEEVEIVYQDKQMIVEGINSMDSEMEVKNTDLESESGLGHPKLLVRTLSEKLNRE 180
           LTDS SEEVEIVYQDKQ+I EGINS+D E+EVKNTDLE+ESGLGH K+++RTLSEKLNRE
Sbjct: 121 LTDSLSEEVEIVYQDKQIIAEGINSIDREIEVKNTDLETESGLGHSKVMLRTLSEKLNRE 180

Query: 181 CVKTQSEKLRRSETEKSRNLEHSHDILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSAI 240
           CV T+ EKLRRSETEK RNLEHS+DILY+QDDLSSEEFQRKIEAFIAKEKKFRREESSAI
Sbjct: 181 CVITEREKLRRSETEKCRNLEHSNDILYHQDDLSSEEFQRKIEAFIAKEKKFRREESSAI 240

[Close]

BLAST of CaUC07G132540 vs. NCBI nr
Match: XP_008452094.1 (PREDICTED: uncharacterized protein LOC103493205 [Cucumis melo] >TYK16675.1 putative TRNA--methyltransferase non-catalytic subunit trm6MTase subunit trm6 [Cucumis melo var. makuwa])

HSP 1 Score: 358.6 bits (919), Expect = 4.2e-95
Identity = 200/247 (80.97%), Postives = 215/247 (87.04%), Query Frame = 0


Query: 1   MDLFFFHKAEKDSTPIPRCNLLHIFAKFFRLLELCFLLLFLSWTLSRLPIALRISGEYFG 60
           MD FFF KAEK STPIPRCNLL IF+KFFR LEL FLLL LSW  SRLPIALRIS +YF 
Sbjct: 1   MDFFFFDKAEKLSTPIPRCNLLQIFSKFFRFLELSFLLLSLSWIFSRLPIALRISADYFT 60

Query: 61  KLFGFIATPLFGFLLCNAIIVALVAKPSQFS-AWRSAQTDRLYEDLIEKTGNG-DLTDSP 120
           KLF FIATPLFGFLLCNAIIVALVAKPSQFS    S QTDR+YEDLIEKTG G DLTDS 
Sbjct: 61  KLFAFIATPLFGFLLCNAIIVALVAKPSQFSRPATSDQTDRIYEDLIEKTGTGSDLTDSA 120

Query: 121 SEEV-EIVYQDKQMIVEG----INSMDSEMEVKNTDLESESGLGHPKLLVRTLSEKLNRE 180
           SEEV EIVYQDK++I EG      S D E+E+KNTDLES+SGLGH K+++R+LSEKLNRE
Sbjct: 121 SEEVEEIVYQDKEIIAEGRVGSNYSTDCEIELKNTDLESDSGLGHSKVILRSLSEKLNRE 180

Query: 181 CVKTQSEKLRRSETEKSRNLEHSHDILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSAI 240
           CVKTQSEKLRRSETEK RNLE+S+DILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSAI
Sbjct: 181 CVKTQSEKLRRSETEKCRNLEYSNDILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSAI 240

[Close]

BLAST of CaUC07G132540 vs. NCBI nr
Match: KAA0044789.1 (putative TRNA--methyltransferase non-catalytic subunit trm6MTase subunit trm6 [Cucumis melo var. makuwa])

HSP 1 Score: 354.4 bits (908), Expect = 8.0e-94
Identity = 198/247 (80.16%), Postives = 214/247 (86.64%), Query Frame = 0


Query: 1   MDLFFFHKAEKDSTPIPRCNLLHIFAKFFRLLELCFLLLFLSWTLSRLPIALRISGEYFG 60
           MD FFF KAEK STPIPRCNLL IF+KFFR+LEL FLLL LSW  SRLPIALRIS +YF 
Sbjct: 1   MDFFFFDKAEKLSTPIPRCNLLQIFSKFFRVLELSFLLLSLSWIFSRLPIALRISADYFT 60

Query: 61  KLFGFIATPLFGFLLCNAIIVALVAKPSQFS-AWRSAQTDRLYEDLIEKTGNG-DLTDSP 120
           KLF FIATPLFGFLLCNAIIVALVAKPSQFS    S QTDR+YEDLIE TG G DLTDS 
Sbjct: 61  KLFAFIATPLFGFLLCNAIIVALVAKPSQFSRPATSDQTDRIYEDLIENTGTGSDLTDSA 120

Query: 121 SEEV-EIVYQDKQMIVEG----INSMDSEMEVKNTDLESESGLGHPKLLVRTLSEKLNRE 180
           SEEV EIVYQDK++I EG      S D E+E+KNTDLES+SGL H K+++R+LSEKLNRE
Sbjct: 121 SEEVEEIVYQDKEIIAEGRVGSNYSTDCEIELKNTDLESDSGLDHSKVILRSLSEKLNRE 180

Query: 181 CVKTQSEKLRRSETEKSRNLEHSHDILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSAI 240
           CVKTQSEKLRRSETEK RNLE+S+DILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSAI
Sbjct: 181 CVKTQSEKLRRSETEKCRNLEYSNDILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSAI 240

[Close]

BLAST of CaUC07G132540 vs. NCBI nr
Match: XP_011653156.1 (uncharacterized protein LOC105435182 [Cucumis sativus] >KGN53297.1 hypothetical protein Csa_015101 [Cucumis sativus])

HSP 1 Score: 345.5 bits (885), Expect = 3.7e-91
Identity = 194/246 (78.86%), Postives = 210/246 (85.37%), Query Frame = 0


Query: 1   MDLFFFHKAEKDSTPIPRCNLLHIFAKFFRLLELCFLLLFLSWTLSRLPIALRISGEYFG 60
           MD FFF KAEK STPIPRCNLL IF+KFFR LEL FLLL LSW  SRLPIALRIS EY  
Sbjct: 1   MDFFFFDKAEKLSTPIPRCNLLQIFSKFFRFLELSFLLLSLSWIFSRLPIALRISAEYST 60

Query: 61  KLFGFIATPLFGFLLCNAIIVALVAKPSQFSAWRSAQTDRLYEDLIEKTGNG-DLTDSPS 120
           KLF FIATPLFGFLLCNAIIVALVAKPSQFS   +++T R+YEDLI+KTG G DLTDS S
Sbjct: 61  KLFAFIATPLFGFLLCNAIIVALVAKPSQFSRRPTSETHRIYEDLIDKTGTGSDLTDSAS 120

Query: 121 EEV-EIVYQDKQMIVEG----INSMDSEMEVKNTDLESESGLGHPKLLVRTLSEKLNREC 180
           EEV EIVYQDKQ+I EG      S D E+EVKNTDLESESGLG  K+++R+LSEKLNREC
Sbjct: 121 EEVEEIVYQDKQIIAEGRVGSNYSTDCEIEVKNTDLESESGLGQSKVILRSLSEKLNREC 180

Query: 181 VKTQSEKLRRSETEKSRNLEHSHDILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSAIV 240
           VKT+SEKLRRSETEK  NLE ++DIL YQDDLSSEEFQRKIEAFIAKEKKFRREESSAIV
Sbjct: 181 VKTKSEKLRRSETEKCGNLECTNDILCYQDDLSSEEFQRKIEAFIAKEKKFRREESSAIV 240

[Close]

BLAST of CaUC07G132540 vs. NCBI nr
Match: XP_022136879.1 (uncharacterized protein LOC111008461, partial [Momordica charantia])

HSP 1 Score: 332.8 bits (852), Expect = 2.5e-87
Identity = 181/243 (74.49%), Postives = 205/243 (84.36%), Query Frame = 0


Query: 1   MDLFFFHKAEKDSTPIPR--CNLLHIFAKFFRLLELCFLLLFLSWTLSRLPIALRISGEY 60
           MD FFF KAEK  T IPR  CNLL IFAK FR LELC LL+FLSW LSRLP A+RISGEY
Sbjct: 1   MDFFFFDKAEKPPTAIPRSSCNLLQIFAKVFRFLELCLLLVFLSWILSRLPFAVRISGEY 60

Query: 61  FGKLFGFIATPLFGFLLCNAIIVALVAKPSQFSAWRSA-----QTDRLYEDLIEKTGNGD 120
           F KLF F+A+PLFGF+LCNAIIVALVAKPSQ S  R A     +TDRLYEDLI K+GNGD
Sbjct: 61  FTKLFAFVASPLFGFILCNAIIVALVAKPSQLSGRRVAVGDGGETDRLYEDLIVKSGNGD 120

Query: 121 LTDSPSEEVEIVYQDKQMIVEGINSMDSEMEVKNTDLESESGLGHPKLLVRTLSEKLNRE 180
           L +SPSE+ EIV+QDK++I E INS+D ++EVK+TD E+ESG+ HPK++ RTLSEK+ RE
Sbjct: 121 LPESPSEDGEIVFQDKEIIAEAINSIDRDVEVKSTDPEAESGIDHPKVIRRTLSEKIKRE 180

Query: 181 CVKTQSEKLRRSETEKSRN-LEHSHDILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSA 236
           C KTQSEKLRRSETEK RN LE SHDI+YYQDDLSSEEFQRKIEAFIA+EKKFRREESSA
Sbjct: 181 CSKTQSEKLRRSETEKCRNILEQSHDIVYYQDDLSSEEFQRKIEAFIAREKKFRREESSA 240

[Close]

BLAST of CaUC07G132540 vs. ExPASy TrEMBL
Match: A0A5D3CYU3 (Putative TRNA--methyltransferase non-catalytic subunit trm6MTase subunit trm6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G005060 PE=4 SV=1)

HSP 1 Score: 358.6 bits (919), Expect = 2.1e-95
Identity = 200/247 (80.97%), Postives = 215/247 (87.04%), Query Frame = 0


Query: 1   MDLFFFHKAEKDSTPIPRCNLLHIFAKFFRLLELCFLLLFLSWTLSRLPIALRISGEYFG 60
           MD FFF KAEK STPIPRCNLL IF+KFFR LEL FLLL LSW  SRLPIALRIS +YF 
Sbjct: 1   MDFFFFDKAEKLSTPIPRCNLLQIFSKFFRFLELSFLLLSLSWIFSRLPIALRISADYFT 60

Query: 61  KLFGFIATPLFGFLLCNAIIVALVAKPSQFS-AWRSAQTDRLYEDLIEKTGNG-DLTDSP 120
           KLF FIATPLFGFLLCNAIIVALVAKPSQFS    S QTDR+YEDLIEKTG G DLTDS 
Sbjct: 61  KLFAFIATPLFGFLLCNAIIVALVAKPSQFSRPATSDQTDRIYEDLIEKTGTGSDLTDSA 120

Query: 121 SEEV-EIVYQDKQMIVEG----INSMDSEMEVKNTDLESESGLGHPKLLVRTLSEKLNRE 180
           SEEV EIVYQDK++I EG      S D E+E+KNTDLES+SGLGH K+++R+LSEKLNRE
Sbjct: 121 SEEVEEIVYQDKEIIAEGRVGSNYSTDCEIELKNTDLESDSGLGHSKVILRSLSEKLNRE 180

Query: 181 CVKTQSEKLRRSETEKSRNLEHSHDILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSAI 240
           CVKTQSEKLRRSETEK RNLE+S+DILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSAI
Sbjct: 181 CVKTQSEKLRRSETEKCRNLEYSNDILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSAI 240

[Close]

BLAST of CaUC07G132540 vs. ExPASy TrEMBL
Match: A0A1S3BT40 (uncharacterized protein LOC103493205 OS=Cucumis melo OX=3656 GN=LOC103493205 PE=4 SV=1)

HSP 1 Score: 358.6 bits (919), Expect = 2.1e-95
Identity = 200/247 (80.97%), Postives = 215/247 (87.04%), Query Frame = 0


Query: 1   MDLFFFHKAEKDSTPIPRCNLLHIFAKFFRLLELCFLLLFLSWTLSRLPIALRISGEYFG 60
           MD FFF KAEK STPIPRCNLL IF+KFFR LEL FLLL LSW  SRLPIALRIS +YF 
Sbjct: 1   MDFFFFDKAEKLSTPIPRCNLLQIFSKFFRFLELSFLLLSLSWIFSRLPIALRISADYFT 60

Query: 61  KLFGFIATPLFGFLLCNAIIVALVAKPSQFS-AWRSAQTDRLYEDLIEKTGNG-DLTDSP 120
           KLF FIATPLFGFLLCNAIIVALVAKPSQFS    S QTDR+YEDLIEKTG G DLTDS 
Sbjct: 61  KLFAFIATPLFGFLLCNAIIVALVAKPSQFSRPATSDQTDRIYEDLIEKTGTGSDLTDSA 120

Query: 121 SEEV-EIVYQDKQMIVEG----INSMDSEMEVKNTDLESESGLGHPKLLVRTLSEKLNRE 180
           SEEV EIVYQDK++I EG      S D E+E+KNTDLES+SGLGH K+++R+LSEKLNRE
Sbjct: 121 SEEVEEIVYQDKEIIAEGRVGSNYSTDCEIELKNTDLESDSGLGHSKVILRSLSEKLNRE 180

Query: 181 CVKTQSEKLRRSETEKSRNLEHSHDILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSAI 240
           CVKTQSEKLRRSETEK RNLE+S+DILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSAI
Sbjct: 181 CVKTQSEKLRRSETEKCRNLEYSNDILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSAI 240

[Close]

BLAST of CaUC07G132540 vs. ExPASy TrEMBL
Match: A0A5A7TU70 (Putative TRNA--methyltransferase non-catalytic subunit trm6MTase subunit trm6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G00800 PE=4 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 3.9e-94
Identity = 198/247 (80.16%), Postives = 214/247 (86.64%), Query Frame = 0


Query: 1   MDLFFFHKAEKDSTPIPRCNLLHIFAKFFRLLELCFLLLFLSWTLSRLPIALRISGEYFG 60
           MD FFF KAEK STPIPRCNLL IF+KFFR+LEL FLLL LSW  SRLPIALRIS +YF 
Sbjct: 1   MDFFFFDKAEKLSTPIPRCNLLQIFSKFFRVLELSFLLLSLSWIFSRLPIALRISADYFT 60

Query: 61  KLFGFIATPLFGFLLCNAIIVALVAKPSQFS-AWRSAQTDRLYEDLIEKTGNG-DLTDSP 120
           KLF FIATPLFGFLLCNAIIVALVAKPSQFS    S QTDR+YEDLIE TG G DLTDS 
Sbjct: 61  KLFAFIATPLFGFLLCNAIIVALVAKPSQFSRPATSDQTDRIYEDLIENTGTGSDLTDSA 120

Query: 121 SEEV-EIVYQDKQMIVEG----INSMDSEMEVKNTDLESESGLGHPKLLVRTLSEKLNRE 180
           SEEV EIVYQDK++I EG      S D E+E+KNTDLES+SGL H K+++R+LSEKLNRE
Sbjct: 121 SEEVEEIVYQDKEIIAEGRVGSNYSTDCEIELKNTDLESDSGLDHSKVILRSLSEKLNRE 180

Query: 181 CVKTQSEKLRRSETEKSRNLEHSHDILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSAI 240
           CVKTQSEKLRRSETEK RNLE+S+DILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSAI
Sbjct: 181 CVKTQSEKLRRSETEKCRNLEYSNDILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSAI 240

[Close]

BLAST of CaUC07G132540 vs. ExPASy TrEMBL
Match: A0A0A0KY10 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G046600 PE=4 SV=1)

HSP 1 Score: 345.5 bits (885), Expect = 1.8e-91
Identity = 194/246 (78.86%), Postives = 210/246 (85.37%), Query Frame = 0


Query: 1   MDLFFFHKAEKDSTPIPRCNLLHIFAKFFRLLELCFLLLFLSWTLSRLPIALRISGEYFG 60
           MD FFF KAEK STPIPRCNLL IF+KFFR LEL FLLL LSW  SRLPIALRIS EY  
Sbjct: 1   MDFFFFDKAEKLSTPIPRCNLLQIFSKFFRFLELSFLLLSLSWIFSRLPIALRISAEYST 60

Query: 61  KLFGFIATPLFGFLLCNAIIVALVAKPSQFSAWRSAQTDRLYEDLIEKTGNG-DLTDSPS 120
           KLF FIATPLFGFLLCNAIIVALVAKPSQFS   +++T R+YEDLI+KTG G DLTDS S
Sbjct: 61  KLFAFIATPLFGFLLCNAIIVALVAKPSQFSRRPTSETHRIYEDLIDKTGTGSDLTDSAS 120

Query: 121 EEV-EIVYQDKQMIVEG----INSMDSEMEVKNTDLESESGLGHPKLLVRTLSEKLNREC 180
           EEV EIVYQDKQ+I EG      S D E+EVKNTDLESESGLG  K+++R+LSEKLNREC
Sbjct: 121 EEVEEIVYQDKQIIAEGRVGSNYSTDCEIEVKNTDLESESGLGQSKVILRSLSEKLNREC 180

Query: 181 VKTQSEKLRRSETEKSRNLEHSHDILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSAIV 240
           VKT+SEKLRRSETEK  NLE ++DIL YQDDLSSEEFQRKIEAFIAKEKKFRREESSAIV
Sbjct: 181 VKTKSEKLRRSETEKCGNLECTNDILCYQDDLSSEEFQRKIEAFIAKEKKFRREESSAIV 240

[Close]

BLAST of CaUC07G132540 vs. ExPASy TrEMBL
Match: A0A6J1C5K3 (uncharacterized protein LOC111008461 OS=Momordica charantia OX=3673 GN=LOC111008461 PE=4 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 1.2e-87
Identity = 181/243 (74.49%), Postives = 205/243 (84.36%), Query Frame = 0


Query: 1   MDLFFFHKAEKDSTPIPR--CNLLHIFAKFFRLLELCFLLLFLSWTLSRLPIALRISGEY 60
           MD FFF KAEK  T IPR  CNLL IFAK FR LELC LL+FLSW LSRLP A+RISGEY
Sbjct: 1   MDFFFFDKAEKPPTAIPRSSCNLLQIFAKVFRFLELCLLLVFLSWILSRLPFAVRISGEY 60

Query: 61  FGKLFGFIATPLFGFLLCNAIIVALVAKPSQFSAWRSA-----QTDRLYEDLIEKTGNGD 120
           F KLF F+A+PLFGF+LCNAIIVALVAKPSQ S  R A     +TDRLYEDLI K+GNGD
Sbjct: 61  FTKLFAFVASPLFGFILCNAIIVALVAKPSQLSGRRVAVGDGGETDRLYEDLIVKSGNGD 120

Query: 121 LTDSPSEEVEIVYQDKQMIVEGINSMDSEMEVKNTDLESESGLGHPKLLVRTLSEKLNRE 180
           L +SPSE+ EIV+QDK++I E INS+D ++EVK+TD E+ESG+ HPK++ RTLSEK+ RE
Sbjct: 121 LPESPSEDGEIVFQDKEIIAEAINSIDRDVEVKSTDPEAESGIDHPKVIRRTLSEKIKRE 180

Query: 181 CVKTQSEKLRRSETEKSRN-LEHSHDILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSA 236
           C KTQSEKLRRSETEK RN LE SHDI+YYQDDLSSEEFQRKIEAFIA+EKKFRREESSA
Sbjct: 181 CSKTQSEKLRRSETEKCRNILEQSHDIVYYQDDLSSEEFQRKIEAFIAREKKFRREESSA 240

[Close]

BLAST of CaUC07G132540 vs. TAIR 10
Match: AT5G66440.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 119.4 bits (298), Expect = 4.0e-27
Identity = 94/251 (37.45%), Postives = 142/251 (56.57%), Query Frame = 0


Query: 1   MDLFFFH--KAEKDSTPIPRCNLLHIFAKFFRLLELCFLLLFLSWTLSRLPIALRISGEY 60
           MD F F   KAEK +  + R N      +FFR  E+C  LLF+ WT S+LP  ++ISG +
Sbjct: 1   MDSFDFDNVKAEK-AKALRRFNRFCRIGRFFRAAEVCVALLFIFWTFSQLPFVVQISGAF 60

Query: 61  FGKLFGFIATPLFGFLLCNAIIVALVAKPSQ--FSAWRSAQTDRLYEDLIEKTGNGDLTD 120
             ++   I+TPLF FLL N+I+V L+ K S    +A  SA+T+ +Y+  +    N     
Sbjct: 61  LRRIAAVISTPLFVFLLGNSIVVVLLTKSSDQTTTAVASAETE-IYQAFVRSVENRSKPS 120

Query: 121 SPSEEVEIVYQDKQMIVEGINS---MDSEMEVKNTDLESESGLGHPKLLVRTLSEKLNRE 180
                  IVY DKQ+IV  ++S   +  +  + + +++S+S   H K+  R+ S+   ++
Sbjct: 121 DEDLTEGIVYDDKQVIVTDLDSNPNLTVDENMPHVEIDSDSS-PHSKVYGRSKSDVSGKQ 180

Query: 181 ----CVKTQSEKLRRSETEK-SRNLEHSHDI----LYYQDDLSSEEFQRKIEAFIAKEKK 236
                +      L+RSETEK  +  E+  D      Y +DDLS+EEFQ+ IEAFIAK++ 
Sbjct: 181 SSNMVMMMMKRSLQRSETEKFCKETENDDDSEEEKNYPEDDLSNEEFQKTIEAFIAKQRM 240

[Close]

BLAST of CaUC07G132540 vs. TAIR 10
Match: AT4G34560.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G66440.1); Has 67 Blast hits to 66 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 57.8 bits (138), Expect = 1.4e-08
Identity = 66/239 (27.62%), Postives = 117/239 (48.95%), Query Frame = 0


Query: 5   FFHKAEKDSTPIPRCNLLHIFAKFFRLLELCFLLLFLSWTLSRLPIALRISGEYFGKLFG 64
           F H   + S  I     +  F   FRL EL  L++ +S  LS  P +++ISG+ F +   
Sbjct: 6   FQHLKMEKSRGILNFQAIRSFTSLFRLFELLLLVILIS-KLS-FP-SVKISGDIFKEAAV 65

Query: 65  FIATPLFGFLLCNAIIVALVAKPSQFSAWR-------SAQTDRLYEDLIEKTGNGD--LT 124
           F+ +P F F + NAI++ L+AK  ++S+          A ++ LY++ + K+      + 
Sbjct: 66  FLVSPRFVFFIGNAIVITLLAKSGRYSSSHEPSKTATEAASNDLYQEFLHKSEKKKPVVY 125

Query: 125 DSPSEEVEIVYQDKQMIVEGINSMDSEMEVKNTDLESESGLGHPKLLVRTLSEKLNRECV 184
            + +E+++     K++      S  +   VK   LES +G    K + R +SEK  R C 
Sbjct: 126 ATKTEQLKKPSGGKRVSFGRSQSHKAFEAVK--PLESTNG---EKNMKRYVSEKHMRVCD 185

Query: 185 KTQSEKLRRSETEKSRNLEHSHDILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSAIV 235
             +   +R  + E               D +S+E+F+ KIEAFIA++K+ +++E   I+
Sbjct: 186 SDKKVVVRVKKPE---------------DGMSNEQFRTKIEAFIARQKRIQKDEEHLII 221

The following BLAST results are available for this feature:

BLAST of CaUC07G132540 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888396.1	1.4e-101	81.38	uncharacterized protein LOC120078241 [Benincasa hispida]	[more]
XP_008452094.1	4.2e-95	80.97	PREDICTED: uncharacterized protein LOC103493205 [Cucumis melo] >TYK16675.1 putat...	[more]
KAA0044789.1	8.0e-94	80.16	putative TRNA--methyltransferase non-catalytic subunit trm6MTase subunit trm6 [C...	[more]
XP_011653156.1	3.7e-91	78.86	uncharacterized protein LOC105435182 [Cucumis sativus] >KGN53297.1 hypothetical ...	[more]
XP_022136879.1	2.5e-87	74.49	uncharacterized protein LOC111008461, partial [Momordica charantia]	[more]

BLAST of CaUC07G132540 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CaUC07G132540 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CYU3	2.1e-95	80.97	Putative TRNA--methyltransferase non-catalytic subunit trm6MTase subunit trm6 OS...	[more]
A0A1S3BT40	2.1e-95	80.97	uncharacterized protein LOC103493205 OS=Cucumis melo OX=3656 GN=LOC103493205 PE=...	[more]
A0A5A7TU70	3.9e-94	80.16	Putative TRNA--methyltransferase non-catalytic subunit trm6MTase subunit trm6 OS...	[more]
A0A0A0KY10	1.8e-91	78.86	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G046600 PE=4 SV=1	[more]
A0A6J1C5K3	1.2e-87	74.49	uncharacterized protein LOC111008461 OS=Momordica charantia OX=3673 GN=LOC111008...	[more]

BLAST of CaUC07G132540 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G66440.1	4.0e-27	37.45	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G34560.1	1.4e-08	27.62	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33640:SF3	TRNA-METHYLTRANSFERASE NON-CATALYTIC SUBUNIT TRM6MTASE SUBUNIT	coord: 1..237
None	No IPR available	PANTHER	PTHR33640	TRANSMEMBRANE PROTEIN	coord: 1..237

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC07G132540.1	CaUC07G132540.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032259	methylation
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008168	methyltransferase activity