CaUC07G131860 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC07G131860
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Plant transposase
Location	Ciama_Chr07: 18178547 .. 18180349 (+)
RNA-Seq Expression	CaUC07G131860
Synteny	CaUC07G131860

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGGTAAATATTTATATTGTATAAAGTAGTTCATTATTATTAACATTTAGTGCCTACTGATTACCTGTTACTATTGCTTTTAGGTTGAAATGGAGGAGAGTAAGTTACCACCTCAGACTAAACAACACAAAAAAGATATCTTAGAAGTGAAAGTTATAGGAAAGAAGAGGTCTTTACGAAGGAAGATTTGTAGTGATGAAATGTTGCATAACCACCAACTAGAAGAGGTAAGGGTTCAAATAGAAAAATCGAATGTGCCTTCCAATGATCACGATAGTTTGCCTATTCTAGATGACAACAATGTGGAAAGATCTCACATTAGTGCTCAACATGAACATTTCACACCCAATCATAATGAGAAGATAGTTGAAGGTAACCCTATTTCAATTCCTACCTTAGACTCACCATCTAATAGAACAAGATCAACTCTTCGTAGGAAAGAAACAACTTCAAATAGAAATAGACTTGAAAGTGAAGACCATATAATCAGTGAACATCCACTTGAAACAACAATTCTGCCAAAAAGAACAAGAGGCCCTACAAAGATGAAGACAATAGCCATTGATAAACAATCTAAAGTGAACCTTGTTTTTAATGAATATGGTCAACCCATTGGGGATGAATCTGTAGGATTAGCTTCTTTTCTTGGTCCACTCGTGCGAGAGGTAGTACCAGTGACTTTAGAAAATTGGAAGAAATTACCTACAAGGTTGAAAATAGTGTTATGGAAGTCTATCCAGGTATGAAGTTACTTTATTTCATTTCATAGTCTTAGTTGAAGGAACATATCATTTTCTCTAATCTAACTACATGATGCTTTAGTCGATGTACAATGTAAATGAAGATTGGCAAAAAACGTTCTTTTCCAAAAGATGGGTAGATTATGGAGGGCTAGAAAATCTCGTCTGGTAAAACAAATTCGAGATGCACCAACAAAGGATGCACTTTTGAAGCTAATGCCTGATAATTTGCAATCTATAGATGATTGGATAGACTTTGTGAGTGAAGACTAGTGCAAACTTCATGGTATAAAAATATCCACTTGAAAAGGCATAATTTTACATTTTCATATTATTAGTATGATATAAATATTGGATATGTCTTTTGTTTGTGTAGTTGAAAAGTGAAAAATACAAAGCCATGAAGAAGAAACAACTCCCACANAGTTTATATGACTTGAATTTGTTGGGATCTTTGTTGGGACATTGAAAGTTCACATTTTTTTTTCATTGTAGATTTGTATTATATAATTTGCATATGTTTGTTGCTAGGATCGCATTGAATAAACGGAGGCTATGACGATAAATTCCACATATAGTGTGGTTGATGATGCATTGAGTAAAGTTCTTGGCCCTGATCGTGGGCATGTAAGAGGATTTGGGTTTGGTGTGACTCGTTCAAAATTATCTCTCTTGCCTCAACAAGNGTAGTAGGAAAGGGTATGCTCGTTTAGCTGAAGAGATGGTAAAGATCATTATCATTGTAATTCAATTTTGCTTTCATATTGAATGTGAGTTCACTTTTTTTATTTTAGAAAAAAAGTTCTTCAAATCCAACTTCAATCACAAGGATTACATTGTGGACAAAGGCACATAGAAAGAAGGATGGACAACCGGTGAATGCAGAAGTTGCTGAGACGCTCGTATGTTTTTTGCTATTTTCTTTATAATAATTGACTTTGTNTATTTGTTTCATTTGAAATTATCATAGGTTGAACCAAGTGATGAATTTTCAAATGGTACTGCAAGTGTACTTAAGCCCACAAATATTCCTTCAACTTTTCCAATGTCTTCTCCATCG

mRNA sequence

ATGACGGTTGAAATGGAGGAGAGTAAGTTACCACCTCAGACTAAACAACACAAAAAAGATATCTTAGAAGTGAAAGTTATAGGAAAGAAGAGGTCTTTACGAAGGAAGATTTGTAGTGATGAAATGTTGCATAACCACCAACTAGAAGAGGTAAGGGTTCAAATAGAAAAATCGAATGTGCCTTCCAATGATCACGATAGTTTGCCTATTCTAGATGACAACAATGTGGAAAGATCTCACATTAGTGCTCAACATGAACATTTCACACCCAATCATAATGAGAAGATAGCTATGACGATAAATTCCACATATAGTGTGGTTGATGATGCATTGAGTAAAGTTCTTGGCCCTGATCGTGGGCATGTAAGAGGATTTGGGTTTGGTGTGACTCGTTCAAAATTATCTCTCTTGCCTCAACAAGNTAGGAAAGGGTATGCTCGTTTAGCTGAAGAGATGGTAAAGATCATTATCATTAAAAAAAGTTCTTCAAATCCAACTTCAATCACAAGGATTACATTGTGGACAAAGGCACATAGAAAGAAGGATGGACAACCGGTGAATGCAGAAGTTGCTGAGACGCTCGTTGAACCAAGTGATGAATTTTCAAATGGTACTGCAAGTGTACTTAAGCCCACAAATATTCCTTCAACTTTTCCAATGTCTTCTCCATCG

Coding sequence (CDS)

ATGACGGTTGAAATGGAGGAGAGTAAGTTACCACCTCAGACTAAACAACACAAAAAAGATATCTTAGAAGTGAAAGTTATAGGAAAGAAGAGGTCTTTACGAAGGAAGATTTGTAGTGATGAAATGTTGCATAACCACCAACTAGAAGAGGTAAGGGTTCAAATAGAAAAATCGAATGTGCCTTCCAATGATCACGATAGTTTGCCTATTCTAGATGACAACAATGTGGAAAGATCTCACATTAGTGCTCAACATGAACATTTCACACCCAATCATAATGAGAAGATAGCTATGACGATAAATTCCACATATAGTGTGGTTGATGATGCATTGAGTAAAGTTCTTGGCCCTGATCGTGGGCATGTAAGAGGATTTGGGTTTGGTGTGACTCGTTCAAAATTATCTCTCTTGCCTCAACAAGNTAGGAAAGGGTATGCTCGTTTAGCTGAAGAGATGGTAAAGATCATTATCATTAAAAAAAGTTCTTCAAATCCAACTTCAATCACAAGGATTACATTGTGGACAAAGGCACATAGAAAGAAGGATGGACAACCGGTGAATGCAGAAGTTGCTGAGACGCTCGTTGAACCAAGTGATGAATTTTCAAATGGTACTGCAAGTGTACTTAAGCCCACAAATATTCCTTCAACTTTTCCAATGTCTTCTCCATCG

Protein sequence

MTVEMEESKLPPQTKQHKKDILEVKVIGKKRSLRRKICSDEMLHNHQLEEVRVQIEKSNVPSNDHDSLPILDDNNVERSHISAQHEHFTPNHNEKIAMTINSTYSVVDDALSKVLGPDRGHVRGFGFGVTRSKLSLLPQQXRKGYARLAEEMVKIIIIKKSSSNPTSITRITLWTKAHRKKDGQPVNAEVAETLVEPSDEFSNGTASVLKPTNIPSTFPMSSPS

Homology

[Close]

BLAST of CaUC07G131860 vs. NCBI nr
Match: KAA0054504.1 (putative TNP1-like transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 98.2 bits (243), Expect = 9.5e-17
Identity = 68/134 (50.75%), Postives = 79/134 (58.96%), Query Frame = 0


Query: 97  AMTINSTYSVVDDALSKVLGPDRGHVRGFGFGVTRSKLSLLPQQ------XRKGYARLAE 156
           A TI ST +VVDDALSKVLGPDRGHVRGFGFGVTRSKLSLL QQ        K Y ++ E
Sbjct: 576 AETIVSTTNVVDDALSKVLGPDRGHVRGFGFGVTRSKLSLLSQQDHKYKVLEKEYLKMKE 635

Query: 157 EMVKIIIIKKSSSNPTSITRITLWTKAHRKKDGQPVNAEVAETLVEPSDEFSNGTASVLK 216
           EMV++  +K        +  +     ++ KK              EPS+E SN TASVLK
Sbjct: 636 EMVEMKTMK------DEMIEMKALMLSYLKKQ------------TEPSEELSNTTASVLK 688

Query: 217 PTNIPSTFPMSSPS 225
             NIP   PM SPS
Sbjct: 696 RLNIP---PMPSPS 688

[Close]

BLAST of CaUC07G131860 vs. NCBI nr
Match: KAA0066537.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 97.8 bits (242), Expect = 1.2e-16
Identity = 67/134 (50.00%), Postives = 77/134 (57.46%), Query Frame = 0


Query: 97  AMTINSTYSVVDDALSKVLGPDRGHVRGFGFGVTRSKLSLLPQQ------XRKGYARLAE 156
           A T  ST +VVDDALSKVLGPDRGHVRGFGFGVTRSKLSLL QQ        K Y ++ E
Sbjct: 126 AETTASTTNVVDDALSKVLGPDRGHVRGFGFGVTRSKLSLLSQQDHKYKVLEKEYLKMKE 185

Query: 157 EMVKIIIIKKSSSNPTSITRITLWTKAHRKKDGQPVNAEVAETLVEPSDEFSNGTASVLK 216
           EMV++  +K       ++    L  +A                  EPS+E SN TASVLK
Sbjct: 186 EMVEMKTMKDEMIEMKALMLSYLKKQA------------------EPSEELSNATASVLK 238

Query: 217 PTNIPSTFPMSSPS 225
             NIP   PM SPS
Sbjct: 246 RLNIP---PMPSPS 238

[Close]

BLAST of CaUC07G131860 vs. NCBI nr
Match: TYK25923.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 97.4 bits (241), Expect = 1.6e-16
Identity = 67/134 (50.00%), Postives = 78/134 (58.21%), Query Frame = 0


Query: 97  AMTINSTYSVVDDALSKVLGPDRGHVRGFGFGVTRSKLSLLPQQ------XRKGYARLAE 156
           A T  ST +VVDDALSKVLGPDRGHVRGFGFGVTRSKLSLL QQ        K Y ++ E
Sbjct: 126 AETTASTTNVVDDALSKVLGPDRGHVRGFGFGVTRSKLSLLSQQDHKYKVLEKEYLKMKE 185

Query: 157 EMVKIIIIKKSSSNPTSITRITLWTKAHRKKDGQPVNAEVAETLVEPSDEFSNGTASVLK 216
           EMV++  +K        +  +     ++ KK              EPS+E SN TASVLK
Sbjct: 186 EMVEMKTMK------DEMIEMKALMLSYLKKQ------------TEPSEELSNATASVLK 238

Query: 217 PTNIPSTFPMSSPS 225
             NIP   PM SPS
Sbjct: 246 RLNIP---PMPSPS 238

[Close]

BLAST of CaUC07G131860 vs. NCBI nr
Match: KAA0040964.1 (putative TNP1-like transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 95.9 bits (237), Expect = 4.7e-16
Identity = 68/150 (45.33%), Postives = 83/150 (55.33%), Query Frame = 0


Query: 81  ISAQHEHFTPNHNEKIAMTINSTYSVVDDALSKVLGPDRGHVRGFGFGVTRSKLSLLPQQ 140
           +++Q  H      +  A T  ST +VVDDALSKVLGPDRGHVRGFGFGVTRSKLSLL  Q
Sbjct: 588 MNSQLRHLYERIEQTEAETTVSTTNVVDDALSKVLGPDRGHVRGFGFGVTRSKLSLLSHQ 647

Query: 141 ------XRKGYARLAEEMVKIIIIKKSSSNPTSITRITLWTKAHRKKDGQPVNAEVAETL 200
                   K Y ++ EEMV++  +K        +  +     ++ KK             
Sbjct: 648 DHKYKVLEKEYLKMKEEMVEMKTMK------DEMIEMKALMLSYLKKQ------------ 707

Query: 201 VEPSDEFSNGTASVLKPTNIPSTFPMSSPS 225
            EPS+E SN TASVLK  NIP   PM SPS
Sbjct: 708 TEPSEELSNATASVLKRLNIP---PMPSPS 716

[Close]

BLAST of CaUC07G131860 vs. NCBI nr
Match: TYK07512.1 (uncharacterized protein E5676_scaffold1702G00300 [Cucumis melo var. makuwa] >TYK21220.1 uncharacterized protein E5676_scaffold359G00290 [Cucumis melo var. makuwa])

HSP 1 Score: 95.1 bits (235), Expect = 8.0e-16
Identity = 66/134 (49.25%), Postives = 77/134 (57.46%), Query Frame = 0


Query: 97   AMTINSTYSVVDDALSKVLGPDRGHVRGFGFGVTRSKLSLLPQQ------XRKGYARLAE 156
            A T  ST +VVDDALSKVLGPDRGHVRGFGFGVTRSKLSLL  Q        K Y ++ E
Sbjct: 1130 AETTVSTTNVVDDALSKVLGPDRGHVRGFGFGVTRSKLSLLSHQDHKYKVLEKEYLKMKE 1189

Query: 157  EMVKIIIIKKSSSNPTSITRITLWTKAHRKKDGQPVNAEVAETLVEPSDEFSNGTASVLK 216
            EMV++  +K        +  +     ++ KK              EPS+E SN TASVLK
Sbjct: 1190 EMVEMKTMK------DEMIEMKALMLSYLKKQ------------TEPSEELSNATASVLK 1242

Query: 217  PTNIPSTFPMSSPS 225
              NIP   PM SPS
Sbjct: 1250 RLNIP---PMPSPS 1242

[Close]

BLAST of CaUC07G131860 vs. ExPASy TrEMBL
Match: A0A5A7UH86 (Putative TNP1-like transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24G002840 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 4.6e-17
Identity = 68/134 (50.75%), Postives = 79/134 (58.96%), Query Frame = 0


Query: 97  AMTINSTYSVVDDALSKVLGPDRGHVRGFGFGVTRSKLSLLPQQ------XRKGYARLAE 156
           A TI ST +VVDDALSKVLGPDRGHVRGFGFGVTRSKLSLL QQ        K Y ++ E
Sbjct: 576 AETIVSTTNVVDDALSKVLGPDRGHVRGFGFGVTRSKLSLLSQQDHKYKVLEKEYLKMKE 635

Query: 157 EMVKIIIIKKSSSNPTSITRITLWTKAHRKKDGQPVNAEVAETLVEPSDEFSNGTASVLK 216
           EMV++  +K        +  +     ++ KK              EPS+E SN TASVLK
Sbjct: 636 EMVEMKTMK------DEMIEMKALMLSYLKKQ------------TEPSEELSNTTASVLK 688

Query: 217 PTNIPSTFPMSSPS 225
             NIP   PM SPS
Sbjct: 696 RLNIP---PMPSPS 688

[Close]

BLAST of CaUC07G131860 vs. ExPASy TrEMBL
Match: A0A5A7VHH9 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold25G00970 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 6.0e-17
Identity = 67/134 (50.00%), Postives = 77/134 (57.46%), Query Frame = 0


Query: 97  AMTINSTYSVVDDALSKVLGPDRGHVRGFGFGVTRSKLSLLPQQ------XRKGYARLAE 156
           A T  ST +VVDDALSKVLGPDRGHVRGFGFGVTRSKLSLL QQ        K Y ++ E
Sbjct: 126 AETTASTTNVVDDALSKVLGPDRGHVRGFGFGVTRSKLSLLSQQDHKYKVLEKEYLKMKE 185

Query: 157 EMVKIIIIKKSSSNPTSITRITLWTKAHRKKDGQPVNAEVAETLVEPSDEFSNGTASVLK 216
           EMV++  +K       ++    L  +A                  EPS+E SN TASVLK
Sbjct: 186 EMVEMKTMKDEMIEMKALMLSYLKKQA------------------EPSEELSNATASVLK 238

Query: 217 PTNIPSTFPMSSPS 225
             NIP   PM SPS
Sbjct: 246 RLNIP---PMPSPS 238

[Close]

BLAST of CaUC07G131860 vs. ExPASy TrEMBL
Match: A0A5D3DQI7 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold190G00150 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 7.8e-17
Identity = 67/134 (50.00%), Postives = 78/134 (58.21%), Query Frame = 0


Query: 97  AMTINSTYSVVDDALSKVLGPDRGHVRGFGFGVTRSKLSLLPQQ------XRKGYARLAE 156
           A T  ST +VVDDALSKVLGPDRGHVRGFGFGVTRSKLSLL QQ        K Y ++ E
Sbjct: 126 AETTASTTNVVDDALSKVLGPDRGHVRGFGFGVTRSKLSLLSQQDHKYKVLEKEYLKMKE 185

Query: 157 EMVKIIIIKKSSSNPTSITRITLWTKAHRKKDGQPVNAEVAETLVEPSDEFSNGTASVLK 216
           EMV++  +K        +  +     ++ KK              EPS+E SN TASVLK
Sbjct: 186 EMVEMKTMK------DEMIEMKALMLSYLKKQ------------TEPSEELSNATASVLK 238

Query: 217 PTNIPSTFPMSSPS 225
             NIP   PM SPS
Sbjct: 246 RLNIP---PMPSPS 238

[Close]

BLAST of CaUC07G131860 vs. ExPASy TrEMBL
Match: A0A5A7TBX7 (Putative TNP1-like transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold125G001660 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 2.3e-16
Identity = 68/150 (45.33%), Postives = 83/150 (55.33%), Query Frame = 0


Query: 81  ISAQHEHFTPNHNEKIAMTINSTYSVVDDALSKVLGPDRGHVRGFGFGVTRSKLSLLPQQ 140
           +++Q  H      +  A T  ST +VVDDALSKVLGPDRGHVRGFGFGVTRSKLSLL  Q
Sbjct: 588 MNSQLRHLYERIEQTEAETTVSTTNVVDDALSKVLGPDRGHVRGFGFGVTRSKLSLLSHQ 647

Query: 141 ------XRKGYARLAEEMVKIIIIKKSSSNPTSITRITLWTKAHRKKDGQPVNAEVAETL 200
                   K Y ++ EEMV++  +K        +  +     ++ KK             
Sbjct: 648 DHKYKVLEKEYLKMKEEMVEMKTMK------DEMIEMKALMLSYLKKQ------------ 707

Query: 201 VEPSDEFSNGTASVLKPTNIPSTFPMSSPS 225
            EPS+E SN TASVLK  NIP   PM SPS
Sbjct: 708 TEPSEELSNATASVLKRLNIP---PMPSPS 716

[Close]

BLAST of CaUC07G131860 vs. ExPASy TrEMBL
Match: A0A5D3DCM2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1702G00300 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 3.9e-16
Identity = 66/134 (49.25%), Postives = 77/134 (57.46%), Query Frame = 0


Query: 97   AMTINSTYSVVDDALSKVLGPDRGHVRGFGFGVTRSKLSLLPQQ------XRKGYARLAE 156
            A T  ST +VVDDALSKVLGPDRGHVRGFGFGVTRSKLSLL  Q        K Y ++ E
Sbjct: 1130 AETTVSTTNVVDDALSKVLGPDRGHVRGFGFGVTRSKLSLLSHQDHKYKVLEKEYLKMKE 1189

Query: 157  EMVKIIIIKKSSSNPTSITRITLWTKAHRKKDGQPVNAEVAETLVEPSDEFSNGTASVLK 216
            EMV++  +K        +  +     ++ KK              EPS+E SN TASVLK
Sbjct: 1190 EMVEMKTMK------DEMIEMKALMLSYLKKQ------------TEPSEELSNATASVLK 1242

Query: 217  PTNIPSTFPMSSPS 225
              NIP   PM SPS
Sbjct: 1250 RLNIP---PMPSPS 1242

The following BLAST results are available for this feature:

BLAST of CaUC07G131860 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0054504.1	9.5e-17	50.75	putative TNP1-like transposon protein [Cucumis melo var. makuwa]	[more]
KAA0066537.1	1.2e-16	50.00	Plant transposase [Cucumis melo var. makuwa]	[more]
TYK25923.1	1.6e-16	50.00	Plant transposase [Cucumis melo var. makuwa]	[more]
KAA0040964.1	4.7e-16	45.33	putative TNP1-like transposon protein [Cucumis melo var. makuwa]	[more]
TYK07512.1	8.0e-16	49.25	uncharacterized protein E5676_scaffold1702G00300 [Cucumis melo var. makuwa] >TYK...	[more]

BLAST of CaUC07G131860 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CaUC07G131860 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UH86	4.6e-17	50.75	Putative TNP1-like transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A5A7VHH9	6.0e-17	50.00	Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold25G009...	[more]
A0A5D3DQI7	7.8e-17	50.00	Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold190G00...	[more]
A0A5A7TBX7	2.3e-16	45.33	Putative TNP1-like transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A5D3DCM2	3.9e-16	49.25	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of CaUC07G131860 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 201..224

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC07G131860.1	CaUC07G131860.1	mRNA