CaUC07G131780 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC07G131780
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	ATP synthase subunit beta, chloroplastic
Location	Ciama_Chr07: 17457232 .. 17457654 (+)
RNA-Seq Expression	CaUC07G131780
Synteny	CaUC07G131780

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAATAAATCCTACTACTTCTGGTCCTGAAGTTTCCACACTTGAAAAAAACAACTTGGGACGTATCACTCAAATCATTGATCCGGTACTAGATGTAGCTTTTCCCCCAGGCAAAATGCCTAATATTTACAACGCTTTGATAGTGAAAGGTCGAGATACTGCCGGTCAAGAAATTAATGTGACTTGTGAAGTACAGCAATTATTAGGAAATAATCGAGTTAGATCTGTAGCTATGAGTGCTACAGATGGTCTAATGAGAGGAATGGAAGTGATGGACACGAGAGCTCCTCTAAGTGTTCCAGTCGACGGAACGACTCTAGGCCGAATTTTCAACGTGCTTGGAGAGACTATTGAGAATTTGGGTCCTGTAGATACTCGCACAGCATCTCCTATTCATAGATCCGCCCCCGCTTTTATATAG

mRNA sequence

ATGAGAATAAATCCTACTACTTCTGGTCCTGAAGTTTCCACACTTGAAAAAAACAACTTGGGACGTATCACTCAAATCATTGATCCGGTACTAGATGTAGCTTTTCCCCCAGGCAAAATGCCTAATATTTACAACGCTTTGATAGTGAAAGGTCGAGATACTGCCGGTCAAGAAATTAATGTGACTTGTGAAGTACAGCAATTATTAGGAAATAATCGAGTTAGATCTGTAGCTATGAGTGCTACAGATGGTCTAATGAGAGGAATGGAAGTGATGGACACGAGAGCTCCTCTAAGTGTTCCAGTCGACGGAACGACTCTAGGCCGAATTTTCAACGTGCTTGGAGAGACTATTGAGAATTTGGGTCCTGTAGATACTCGCACAGCATCTCCTATTCATAGATCCGCCCCCGCTTTTATATAG

Coding sequence (CDS)

ATGAGAATAAATCCTACTACTTCTGGTCCTGAAGTTTCCACACTTGAAAAAAACAACTTGGGACGTATCACTCAAATCATTGATCCGGTACTAGATGTAGCTTTTCCCCCAGGCAAAATGCCTAATATTTACAACGCTTTGATAGTGAAAGGTCGAGATACTGCCGGTCAAGAAATTAATGTGACTTGTGAAGTACAGCAATTATTAGGAAATAATCGAGTTAGATCTGTAGCTATGAGTGCTACAGATGGTCTAATGAGAGGAATGGAAGTGATGGACACGAGAGCTCCTCTAAGTGTTCCAGTCGACGGAACGACTCTAGGCCGAATTTTCAACGTGCTTGGAGAGACTATTGAGAATTTGGGTCCTGTAGATACTCGCACAGCATCTCCTATTCATAGATCCGCCCCCGCTTTTATATAG

Protein sequence

MRINPTTSGPEVSTLEKNNLGRITQIIDPVLDVAFPPGKMPNIYNALIVKGRDTAGQEINVTCEVQQLLGNNRVRSVAMSATDGLMRGMEVMDTRAPLSVPVDGTTLGRIFNVLGETIENLGPVDTRTASPIHRSAPAFI

Homology

[Close]

BLAST of CaUC07G131780 vs. NCBI nr
Match: YP_009752082.1 (CF1 subunit beta [Dendrosicyos socotranus] >YP_009753096.1 CF1 subunit beta [Corallocarpus boehmii] >QIT05492.1 CF1 subunit beta [Dendrosicyos socotranus] >QIT06168.1 CF1 subunit beta [Corallocarpus boehmii])

HSP 1 Score: 264.2 bits (674), Expect = 6.2e-67
Identity = 131/140 (93.57%), Postives = 135/140 (96.43%), Query Frame = 0


Query: 1   MRINPTTSGPEVSTLEKNNLGRITQIIDPVLDVAFPPGKMPNIYNALIVKGRDTAGQEIN 60
           MRINPTTSGPEVSTLEKNNLGRI QII PVLDVAFPPGKMPNIYNALIVKG+DTAGQEIN
Sbjct: 1   MRINPTTSGPEVSTLEKNNLGRIAQIIGPVLDVAFPPGKMPNIYNALIVKGQDTAGQEIN 60

Query: 61  VTCEVQQLLGNNRVRSVAMSATDGLMRGMEVMDTRAPLSVPVDGTTLGRIFNVLGETIEN 120
           VTCEVQQLLGNNRVR+VAMSATDGLMRGMEV+DTRAPLSVPV GTTLGRIFNVLGE I+N
Sbjct: 61  VTCEVQQLLGNNRVRAVAMSATDGLMRGMEVVDTRAPLSVPVGGTTLGRIFNVLGEPIDN 120

Query: 121 LGPVDTRTASPIHRSAPAFI 141
           LGPVDTRT SPIHRSAPAFI
Sbjct: 121 LGPVDTRTTSPIHRSAPAFI 140

[Close]

BLAST of CaUC07G131780 vs. NCBI nr
Match: QIT04057.1 (CF1 subunit beta [Luffa aegyptiaca] >QKX48566.1 ATP synthase CF1 beta subunit [Luffa aegyptiaca])

HSP 1 Score: 262.3 bits (669), Expect = 2.4e-66
Identity = 130/140 (92.86%), Postives = 134/140 (95.71%), Query Frame = 0


Query: 1   MRINPTTSGPEVSTLEKNNLGRITQIIDPVLDVAFPPGKMPNIYNALIVKGRDTAGQEIN 60
           MRINPTTSGPEVSTLEKNNLGRI QII PVLDVAFPPGKMPNIYNALIVKG+DTAGQEIN
Sbjct: 1   MRINPTTSGPEVSTLEKNNLGRIAQIIGPVLDVAFPPGKMPNIYNALIVKGQDTAGQEIN 60

Query: 61  VTCEVQQLLGNNRVRSVAMSATDGLMRGMEVMDTRAPLSVPVDGTTLGRIFNVLGETIEN 120
           VTCEVQQLLGNNRVR+VAMSATDGLMRGMEV+DTRAPLSVPV G TLGRIFNVLGE I+N
Sbjct: 61  VTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTRAPLSVPVGGATLGRIFNVLGEPIDN 120

Query: 121 LGPVDTRTASPIHRSAPAFI 141
           LGPVDTRT SPIHRSAPAFI
Sbjct: 121 LGPVDTRTTSPIHRSAPAFI 140

[Close]

BLAST of CaUC07G131780 vs. NCBI nr
Match: YP_010131101.1 (ATP synthase CF1 beta subunit [Benincasa hispida] >QPZ75748.1 ATP synthase CF1 beta subunit [Benincasa hispida] >QSQ72317.1 CF1 subunit beta [Benincasa hispida])

HSP 1 Score: 262.3 bits (669), Expect = 2.4e-66
Identity = 130/140 (92.86%), Postives = 134/140 (95.71%), Query Frame = 0


Query: 1   MRINPTTSGPEVSTLEKNNLGRITQIIDPVLDVAFPPGKMPNIYNALIVKGRDTAGQEIN 60
           MRINPTTSGPEVSTLEKNNLGRI QII PVLDVAFPPGKMPNIYNALIVKG+DTAGQEIN
Sbjct: 1   MRINPTTSGPEVSTLEKNNLGRIAQIIGPVLDVAFPPGKMPNIYNALIVKGQDTAGQEIN 60

Query: 61  VTCEVQQLLGNNRVRSVAMSATDGLMRGMEVMDTRAPLSVPVDGTTLGRIFNVLGETIEN 120
           VTCEVQQLLGNNRVR+VAMSATDGLMRGMEV+DTRAPLSVPV G TLGRIFNVLGE I+N
Sbjct: 61  VTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTRAPLSVPVGGATLGRIFNVLGEPIDN 120

Query: 121 LGPVDTRTASPIHRSAPAFI 141
           LGPVDTRT SPIHRSAPAFI
Sbjct: 121 LGPVDTRTTSPIHRSAPAFI 140

[Close]

BLAST of CaUC07G131780 vs. NCBI nr
Match: YP_009525193.1 (ATP synthase CF1 beta subunit [Hodgsonia macrocarpa] >YP_009751660.1 CF1 subunit beta [Hodgsonia heteroclita] >AXR94509.1 ATP synthase CF1 beta subunit [Hodgsonia macrocarpa] >AXR94594.1 ATP synthase CF1 beta subunit [Hodgsonia macrocarpa] >AXR94678.1 ATP synthase CF1 beta subunit [Hodgsonia macrocarpa] >AXR94763.1 ATP synthase CF1 beta subunit [Hodgsonia macrocarpa] >QIT04393.1 CF1 subunit beta [Hodgsonia heteroclita])

HSP 1 Score: 262.3 bits (669), Expect = 2.4e-66
Identity = 130/140 (92.86%), Postives = 134/140 (95.71%), Query Frame = 0


Query: 1   MRINPTTSGPEVSTLEKNNLGRITQIIDPVLDVAFPPGKMPNIYNALIVKGRDTAGQEIN 60
           MRINPTTSGPEVSTLEKNNLGRI QII PVLDVAFPPGKMPNIYNALIVKG+DTAGQEIN
Sbjct: 1   MRINPTTSGPEVSTLEKNNLGRIAQIIGPVLDVAFPPGKMPNIYNALIVKGQDTAGQEIN 60

Query: 61  VTCEVQQLLGNNRVRSVAMSATDGLMRGMEVMDTRAPLSVPVDGTTLGRIFNVLGETIEN 120
           VTCEVQQLLGNNRVR+VAMSATDGLMRGMEV+DTRAPLSVPV G TLGRIFNVLGE I+N
Sbjct: 61  VTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTRAPLSVPVGGATLGRIFNVLGEPIDN 120

Query: 121 LGPVDTRTASPIHRSAPAFI 141
           LGPVDTRT SPIHRSAPAFI
Sbjct: 121 LGPVDTRTTSPIHRSAPAFI 140

[Close]

BLAST of CaUC07G131780 vs. NCBI nr
Match: QZL38688.1 (CF1 subunit beta [Citrullus ecirrhosus])

HSP 1 Score: 262.3 bits (669), Expect = 2.4e-66
Identity = 130/140 (92.86%), Postives = 134/140 (95.71%), Query Frame = 0


Query: 1   MRINPTTSGPEVSTLEKNNLGRITQIIDPVLDVAFPPGKMPNIYNALIVKGRDTAGQEIN 60
           MRINPTTSGPEVSTLEKNNLGRI QII PVLDVAFPPGKMPNIYNALIVKG+DTAGQEIN
Sbjct: 1   MRINPTTSGPEVSTLEKNNLGRIAQIIGPVLDVAFPPGKMPNIYNALIVKGQDTAGQEIN 60

Query: 61  VTCEVQQLLGNNRVRSVAMSATDGLMRGMEVMDTRAPLSVPVDGTTLGRIFNVLGETIEN 120
           VTCEVQQLLGNNRVR+VAMSATDGLMRGMEV+DTRAPLSVPV G TLGRIFNVLGE I+N
Sbjct: 61  VTCEVQQLLGNNRVRAVAMSATDGLMRGMEVVDTRAPLSVPVGGATLGRIFNVLGEPIDN 120

Query: 121 LGPVDTRTASPIHRSAPAFI 141
           LGPVDTRT SPIHRSAPAFI
Sbjct: 121 LGPVDTRTTSPIHRSAPAFI 140

[Close]

BLAST of CaUC07G131780 vs. ExPASy Swiss-Prot
Match: A6MM43 (ATP synthase subunit beta, chloroplastic OS=Buxus microphylla OX=153571 GN=atpB PE=3 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 8.5e-67
Identity = 124/140 (88.57%), Postives = 131/140 (93.57%), Query Frame = 0


Query: 1   MRINPTTSGPEVSTLEKNNLGRITQIIDPVLDVAFPPGKMPNIYNALIVKGRDTAGQEIN 60
           MRINPTTSGPEVSTLE+ NLGRI QII PVLDVAFPPGKMPNIYNAL+VKGRDT GQ+IN
Sbjct: 1   MRINPTTSGPEVSTLEEKNLGRIAQIIGPVLDVAFPPGKMPNIYNALVVKGRDTVGQQIN 60

Query: 61  VTCEVQQLLGNNRVRSVAMSATDGLMRGMEVMDTRAPLSVPVDGTTLGRIFNVLGETIEN 120
           VTCEVQQLLGNNRVR+VAMSATDGL RGMEV+DTRAPLSVPV G TLGRIFNVLGE ++N
Sbjct: 61  VTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTRAPLSVPVGGATLGRIFNVLGEPVDN 120

Query: 121 LGPVDTRTASPIHRSAPAFI 141
           LGPVDTRT SPIHRSAPAFI
Sbjct: 121 LGPVDTRTTSPIHRSAPAFI 140

[Close]

BLAST of CaUC07G131780 vs. ExPASy Swiss-Prot
Match: Q4VZI5 (ATP synthase subunit beta, chloroplastic OS=Cucumis sativus OX=3659 GN=atpB PE=3 SV=2)

HSP 1 Score: 254.2 bits (648), Expect = 8.5e-67
Identity = 126/140 (90.00%), Postives = 131/140 (93.57%), Query Frame = 0


Query: 1   MRINPTTSGPEVSTLEKNNLGRITQIIDPVLDVAFPPGKMPNIYNALIVKGRDTAGQEIN 60
           MRINPTTS PEVSTLEKNNLGRI QII PVLDVAFPPGKMPNIYNALIVKG+D +GQEIN
Sbjct: 1   MRINPTTSSPEVSTLEKNNLGRIAQIIGPVLDVAFPPGKMPNIYNALIVKGQDISGQEIN 60

Query: 61  VTCEVQQLLGNNRVRSVAMSATDGLMRGMEVMDTRAPLSVPVDGTTLGRIFNVLGETIEN 120
           VTCEVQQLLGNNRVR+VAMSATDGL RGMEV+DTRAPLSVPV G TLGRIFNVLGE I+N
Sbjct: 61  VTCEVQQLLGNNRVRAVAMSATDGLTRGMEVVDTRAPLSVPVGGATLGRIFNVLGEPIDN 120

Query: 121 LGPVDTRTASPIHRSAPAFI 141
           LGPVDTRT SPIHRSAPAFI
Sbjct: 121 LGPVDTRTTSPIHRSAPAFI 140

[Close]

BLAST of CaUC07G131780 vs. ExPASy Swiss-Prot
Match: Q9MRR1 (ATP synthase subunit beta, chloroplastic OS=Cinnamomum camphora OX=13429 GN=atpB PE=3 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 2.5e-66
Identity = 124/140 (88.57%), Postives = 130/140 (92.86%), Query Frame = 0


Query: 1   MRINPTTSGPEVSTLEKNNLGRITQIIDPVLDVAFPPGKMPNIYNALIVKGRDTAGQEIN 60
           MRINPTTSGP VSTLEK NLGRI QII PVLDVAFPPGKMPNIYNAL+VKGRDT GQ+IN
Sbjct: 1   MRINPTTSGPGVSTLEKKNLGRIAQIIGPVLDVAFPPGKMPNIYNALVVKGRDTVGQQIN 60

Query: 61  VTCEVQQLLGNNRVRSVAMSATDGLMRGMEVMDTRAPLSVPVDGTTLGRIFNVLGETIEN 120
           VTCEVQQLLGNNRVR+VAMSATDGLMRGMEV+DT APLSVPV G TLGRIFNVLGE ++N
Sbjct: 61  VTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDN 120

Query: 121 LGPVDTRTASPIHRSAPAFI 141
           LGPVDTRT SPIHRSAPAFI
Sbjct: 121 LGPVDTRTTSPIHRSAPAFI 140

[Close]

BLAST of CaUC07G131780 vs. ExPASy Swiss-Prot
Match: Q0ZJ13 (ATP synthase subunit beta, chloroplastic OS=Vitis vinifera OX=29760 GN=atpB PE=3 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 2.5e-66
Identity = 124/140 (88.57%), Postives = 130/140 (92.86%), Query Frame = 0


Query: 1   MRINPTTSGPEVSTLEKNNLGRITQIIDPVLDVAFPPGKMPNIYNALIVKGRDTAGQEIN 60
           MRINPTTSGP VSTLEK NLGRI QII PVLDVAFPPGKMPNIYNAL+VKGRDT GQ+IN
Sbjct: 1   MRINPTTSGPGVSTLEKKNLGRIAQIIGPVLDVAFPPGKMPNIYNALVVKGRDTVGQQIN 60

Query: 61  VTCEVQQLLGNNRVRSVAMSATDGLMRGMEVMDTRAPLSVPVDGTTLGRIFNVLGETIEN 120
           VTCEVQQLLGNNRVR+VAMSATDGLMRGMEV+DT APLSVPV G TLGRIFNVLGE ++N
Sbjct: 61  VTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDN 120

Query: 121 LGPVDTRTASPIHRSAPAFI 141
           LGPVDTRT SPIHRSAPAFI
Sbjct: 121 LGPVDTRTTSPIHRSAPAFI 140

[Close]

BLAST of CaUC07G131780 vs. ExPASy Swiss-Prot
Match: Q49KZ1 (ATP synthase subunit beta, chloroplastic OS=Eucalyptus globulus subsp. globulus OX=71271 GN=atpB PE=3 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 4.2e-66
Identity = 124/140 (88.57%), Postives = 131/140 (93.57%), Query Frame = 0


Query: 1   MRINPTTSGPEVSTLEKNNLGRITQIIDPVLDVAFPPGKMPNIYNALIVKGRDTAGQEIN 60
           MRINPTTSGP VSTLEK NLGRI+QII PVLDVAFPPGKMPNIYNAL+VKGRDT GQEIN
Sbjct: 1   MRINPTTSGPGVSTLEKKNLGRISQIIGPVLDVAFPPGKMPNIYNALVVKGRDTIGQEIN 60

Query: 61  VTCEVQQLLGNNRVRSVAMSATDGLMRGMEVMDTRAPLSVPVDGTTLGRIFNVLGETIEN 120
           VTCEVQQLLGNNRVR+VAMSATDGLMRGMEV+DT APLSVPV G TLGRIFNVLGE +++
Sbjct: 61  VTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDD 120

Query: 121 LGPVDTRTASPIHRSAPAFI 141
           LGPVDTRT SPIHRSAPAFI
Sbjct: 121 LGPVDTRTTSPIHRSAPAFI 140

[Close]

BLAST of CaUC07G131780 vs. ExPASy TrEMBL
Match: A0A6H0EV22 (ATP synthase subunit beta, chloroplastic OS=Corallocarpus boehmii OX=386154 GN=atpB PE=3 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 3.0e-67
Identity = 131/140 (93.57%), Postives = 135/140 (96.43%), Query Frame = 0


Query: 1   MRINPTTSGPEVSTLEKNNLGRITQIIDPVLDVAFPPGKMPNIYNALIVKGRDTAGQEIN 60
           MRINPTTSGPEVSTLEKNNLGRI QII PVLDVAFPPGKMPNIYNALIVKG+DTAGQEIN
Sbjct: 1   MRINPTTSGPEVSTLEKNNLGRIAQIIGPVLDVAFPPGKMPNIYNALIVKGQDTAGQEIN 60

Query: 61  VTCEVQQLLGNNRVRSVAMSATDGLMRGMEVMDTRAPLSVPVDGTTLGRIFNVLGETIEN 120
           VTCEVQQLLGNNRVR+VAMSATDGLMRGMEV+DTRAPLSVPV GTTLGRIFNVLGE I+N
Sbjct: 61  VTCEVQQLLGNNRVRAVAMSATDGLMRGMEVVDTRAPLSVPVGGTTLGRIFNVLGEPIDN 120

Query: 121 LGPVDTRTASPIHRSAPAFI 141
           LGPVDTRT SPIHRSAPAFI
Sbjct: 121 LGPVDTRTTSPIHRSAPAFI 140

[Close]

BLAST of CaUC07G131780 vs. ExPASy TrEMBL
Match: A0A6H0ET20 (ATP synthase subunit beta, chloroplastic OS=Dendrosicyos socotranus OX=229694 GN=atpB PE=3 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 3.0e-67
Identity = 131/140 (93.57%), Postives = 135/140 (96.43%), Query Frame = 0


Query: 1   MRINPTTSGPEVSTLEKNNLGRITQIIDPVLDVAFPPGKMPNIYNALIVKGRDTAGQEIN 60
           MRINPTTSGPEVSTLEKNNLGRI QII PVLDVAFPPGKMPNIYNALIVKG+DTAGQEIN
Sbjct: 1   MRINPTTSGPEVSTLEKNNLGRIAQIIGPVLDVAFPPGKMPNIYNALIVKGQDTAGQEIN 60

Query: 61  VTCEVQQLLGNNRVRSVAMSATDGLMRGMEVMDTRAPLSVPVDGTTLGRIFNVLGETIEN 120
           VTCEVQQLLGNNRVR+VAMSATDGLMRGMEV+DTRAPLSVPV GTTLGRIFNVLGE I+N
Sbjct: 61  VTCEVQQLLGNNRVRAVAMSATDGLMRGMEVVDTRAPLSVPVGGTTLGRIFNVLGEPIDN 120

Query: 121 LGPVDTRTASPIHRSAPAFI 141
           LGPVDTRT SPIHRSAPAFI
Sbjct: 121 LGPVDTRTTSPIHRSAPAFI 140

[Close]

BLAST of CaUC07G131780 vs. ExPASy TrEMBL
Match: A0A346QNJ3 (ATP synthase subunit beta, chloroplastic OS=Hodgsonia macrocarpa OX=2184935 GN=atpB PE=3 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 1.1e-66
Identity = 130/140 (92.86%), Postives = 134/140 (95.71%), Query Frame = 0


Query: 1   MRINPTTSGPEVSTLEKNNLGRITQIIDPVLDVAFPPGKMPNIYNALIVKGRDTAGQEIN 60
           MRINPTTSGPEVSTLEKNNLGRI QII PVLDVAFPPGKMPNIYNALIVKG+DTAGQEIN
Sbjct: 1   MRINPTTSGPEVSTLEKNNLGRIAQIIGPVLDVAFPPGKMPNIYNALIVKGQDTAGQEIN 60

Query: 61  VTCEVQQLLGNNRVRSVAMSATDGLMRGMEVMDTRAPLSVPVDGTTLGRIFNVLGETIEN 120
           VTCEVQQLLGNNRVR+VAMSATDGLMRGMEV+DTRAPLSVPV G TLGRIFNVLGE I+N
Sbjct: 61  VTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTRAPLSVPVGGATLGRIFNVLGEPIDN 120

Query: 121 LGPVDTRTASPIHRSAPAFI 141
           LGPVDTRT SPIHRSAPAFI
Sbjct: 121 LGPVDTRTTSPIHRSAPAFI 140

[Close]

BLAST of CaUC07G131780 vs. ExPASy TrEMBL
Match: A0A6H0EQM2 (ATP synthase subunit beta, chloroplastic OS=Luffa aegyptiaca OX=3670 GN=atpB PE=3 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 1.1e-66
Identity = 130/140 (92.86%), Postives = 134/140 (95.71%), Query Frame = 0


Query: 1   MRINPTTSGPEVSTLEKNNLGRITQIIDPVLDVAFPPGKMPNIYNALIVKGRDTAGQEIN 60
           MRINPTTSGPEVSTLEKNNLGRI QII PVLDVAFPPGKMPNIYNALIVKG+DTAGQEIN
Sbjct: 1   MRINPTTSGPEVSTLEKNNLGRIAQIIGPVLDVAFPPGKMPNIYNALIVKGQDTAGQEIN 60

Query: 61  VTCEVQQLLGNNRVRSVAMSATDGLMRGMEVMDTRAPLSVPVDGTTLGRIFNVLGETIEN 120
           VTCEVQQLLGNNRVR+VAMSATDGLMRGMEV+DTRAPLSVPV G TLGRIFNVLGE I+N
Sbjct: 61  VTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTRAPLSVPVGGATLGRIFNVLGEPIDN 120

Query: 121 LGPVDTRTASPIHRSAPAFI 141
           LGPVDTRT SPIHRSAPAFI
Sbjct: 121 LGPVDTRTTSPIHRSAPAFI 140

[Close]

BLAST of CaUC07G131780 vs. ExPASy TrEMBL
Match: A0A6H0ER26 (ATP synthase subunit beta, chloroplastic OS=Hodgsonia heteroclita OX=386184 GN=atpB PE=3 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 1.1e-66
Identity = 130/140 (92.86%), Postives = 134/140 (95.71%), Query Frame = 0


Query: 1   MRINPTTSGPEVSTLEKNNLGRITQIIDPVLDVAFPPGKMPNIYNALIVKGRDTAGQEIN 60
           MRINPTTSGPEVSTLEKNNLGRI QII PVLDVAFPPGKMPNIYNALIVKG+DTAGQEIN
Sbjct: 1   MRINPTTSGPEVSTLEKNNLGRIAQIIGPVLDVAFPPGKMPNIYNALIVKGQDTAGQEIN 60

Query: 61  VTCEVQQLLGNNRVRSVAMSATDGLMRGMEVMDTRAPLSVPVDGTTLGRIFNVLGETIEN 120
           VTCEVQQLLGNNRVR+VAMSATDGLMRGMEV+DTRAPLSVPV G TLGRIFNVLGE I+N
Sbjct: 61  VTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTRAPLSVPVGGATLGRIFNVLGEPIDN 120

Query: 121 LGPVDTRTASPIHRSAPAFI 141
           LGPVDTRT SPIHRSAPAFI
Sbjct: 121 LGPVDTRTTSPIHRSAPAFI 140

[Close]

BLAST of CaUC07G131780 vs. TAIR 10
Match: ATCG00480.1 (ATP synthase subunit beta )

HSP 1 Score: 236.5 bits (602), Expect = 1.3e-62
Identity = 116/140 (82.86%), Postives = 124/140 (88.57%), Query Frame = 0


Query: 1   MRINPTTSGPEVSTLEKNNLGRITQIIDPVLDVAFPPGKMPNIYNALIVKGRDTAGQEIN 60
           MR NPTTS PEVS  EK NLGRI QII PVLDVAFPPGKMPNIYNAL+VKGRDT GQEIN
Sbjct: 1   MRTNPTTSNPEVSIREKKNLGRIAQIIGPVLDVAFPPGKMPNIYNALVVKGRDTLGQEIN 60

Query: 61  VTCEVQQLLGNNRVRSVAMSATDGLMRGMEVMDTRAPLSVPVDGTTLGRIFNVLGETIEN 120
           VTCEVQQLLGNNRVR+VAMSAT+GL RGM+V+D   PLSVPV G TLGRIFNVLGE ++N
Sbjct: 61  VTCEVQQLLGNNRVRAVAMSATEGLKRGMDVVDMGNPLSVPVGGATLGRIFNVLGEPVDN 120

Query: 121 LGPVDTRTASPIHRSAPAFI 141
           LGPVDTRT SPIH+SAPAFI
Sbjct: 121 LGPVDTRTTSPIHKSAPAFI 140

[Close]

BLAST of CaUC07G131780 vs. TAIR 10
Match: AT5G08670.1 (ATP synthase alpha/beta family protein )

HSP 1 Score: 99.8 bits (247), Expect = 1.9e-21
Identity = 54/125 (43.20%), Postives = 76/125 (60.80%), Query Frame = 0


Query: 17  KNNLGRITQIIDPVLDVAFPPGK-MPNIYNALIVKGRDTAGQEINVTCEVQQLLGNNRVR 76
           K  +GR+ Q+I  ++DV F   + +P I  +L V+   T      +  EV   LG N VR
Sbjct: 80  KGAIGRVCQVIGAIVDVRFEDQEGLPPIMTSLEVQDHPT-----RLVLEVSHHLGQNVVR 139

Query: 77  SVAMSATDGLMRGMEVMDTRAPLSVPVDGTTLGRIFNVLGETIENLGPVDTRTASPIHRS 136
           ++AM  T+GL+RG +V++T AP++VPV   TLGRI NVLGE I+  G + T    PIHR 
Sbjct: 140 TIAMDGTEGLVRGRKVLNTGAPITVPVGRATLGRIMNVLGEPIDERGEIKTEHYLPIHRD 199

Query: 137 APAFI 141
           APA +
Sbjct: 200 APALV 199

[Close]

BLAST of CaUC07G131780 vs. TAIR 10
Match: AT5G08680.1 (ATP synthase alpha/beta family protein )

HSP 1 Score: 99.8 bits (247), Expect = 1.9e-21
Identity = 54/125 (43.20%), Postives = 76/125 (60.80%), Query Frame = 0


Query: 17  KNNLGRITQIIDPVLDVAFPPGK-MPNIYNALIVKGRDTAGQEINVTCEVQQLLGNNRVR 76
           K  +GR+ Q+I  ++DV F   + +P I  +L V+   T      +  EV   LG N VR
Sbjct: 83  KGAIGRVCQVIGAIVDVRFEDQEGLPPIMTSLEVQDHPT-----RLVLEVSHHLGQNVVR 142

Query: 77  SVAMSATDGLMRGMEVMDTRAPLSVPVDGTTLGRIFNVLGETIENLGPVDTRTASPIHRS 136
           ++AM  T+GL+RG +V++T AP++VPV   TLGRI NVLGE I+  G + T    PIHR 
Sbjct: 143 TIAMDGTEGLVRGRKVLNTGAPITVPVGRATLGRIMNVLGEPIDERGEIKTEHYLPIHRD 202

Query: 137 APAFI 141
           APA +
Sbjct: 203 APALV 202

[Close]

BLAST of CaUC07G131780 vs. TAIR 10
Match: AT5G08690.1 (ATP synthase alpha/beta family protein )

HSP 1 Score: 99.8 bits (247), Expect = 1.9e-21
Identity = 54/125 (43.20%), Postives = 76/125 (60.80%), Query Frame = 0


Query: 17  KNNLGRITQIIDPVLDVAFPPGK-MPNIYNALIVKGRDTAGQEINVTCEVQQLLGNNRVR 76
           K  +GR+ Q+I  ++DV F   + +P I  +L V+   T      +  EV   LG N VR
Sbjct: 80  KGAIGRVCQVIGAIVDVRFEDQEGLPPIMTSLEVQDHPT-----RLVLEVSHHLGQNVVR 139

Query: 77  SVAMSATDGLMRGMEVMDTRAPLSVPVDGTTLGRIFNVLGETIENLGPVDTRTASPIHRS 136
           ++AM  T+GL+RG +V++T AP++VPV   TLGRI NVLGE I+  G + T    PIHR 
Sbjct: 140 TIAMDGTEGLVRGRKVLNTGAPITVPVGRATLGRIMNVLGEPIDERGEIKTEHYLPIHRD 199

Query: 137 APAFI 141
           APA +
Sbjct: 200 APALV 199

The following BLAST results are available for this feature:

BLAST of CaUC07G131780 vs. NCBI nr


Match Name	E-value	Identity	Description
YP_009752082.1	6.2e-67	93.57	CF1 subunit beta [Dendrosicyos socotranus] >YP_009753096.1 CF1 subunit beta [Cor...	[more]
QIT04057.1	2.4e-66	92.86	CF1 subunit beta [Luffa aegyptiaca] >QKX48566.1 ATP synthase CF1 beta subunit [L...	[more]
YP_010131101.1	2.4e-66	92.86	ATP synthase CF1 beta subunit [Benincasa hispida] >QPZ75748.1 ATP synthase CF1 b...	[more]
YP_009525193.1	2.4e-66	92.86	ATP synthase CF1 beta subunit [Hodgsonia macrocarpa] >YP_009751660.1 CF1 subunit...	[more]
QZL38688.1	2.4e-66	92.86	CF1 subunit beta [Citrullus ecirrhosus]	[more]

BLAST of CaUC07G131780 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A6MM43	8.5e-67	88.57	ATP synthase subunit beta, chloroplastic OS=Buxus microphylla OX=153571 GN=atpB ...	[more]
Q4VZI5	8.5e-67	90.00	ATP synthase subunit beta, chloroplastic OS=Cucumis sativus OX=3659 GN=atpB PE=3...	[more]
Q9MRR1	2.5e-66	88.57	ATP synthase subunit beta, chloroplastic OS=Cinnamomum camphora OX=13429 GN=atpB...	[more]
Q0ZJ13	2.5e-66	88.57	ATP synthase subunit beta, chloroplastic OS=Vitis vinifera OX=29760 GN=atpB PE=3...	[more]
Q49KZ1	4.2e-66	88.57	ATP synthase subunit beta, chloroplastic OS=Eucalyptus globulus subsp. globulus ...	[more]

BLAST of CaUC07G131780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6H0EV22	3.0e-67	93.57	ATP synthase subunit beta, chloroplastic OS=Corallocarpus boehmii OX=386154 GN=a...	[more]
A0A6H0ET20	3.0e-67	93.57	ATP synthase subunit beta, chloroplastic OS=Dendrosicyos socotranus OX=229694 GN...	[more]
A0A346QNJ3	1.1e-66	92.86	ATP synthase subunit beta, chloroplastic OS=Hodgsonia macrocarpa OX=2184935 GN=a...	[more]
A0A6H0EQM2	1.1e-66	92.86	ATP synthase subunit beta, chloroplastic OS=Luffa aegyptiaca OX=3670 GN=atpB PE=...	[more]
A0A6H0ER26	1.1e-66	92.86	ATP synthase subunit beta, chloroplastic OS=Hodgsonia heteroclita OX=386184 GN=a...	[more]

BLAST of CaUC07G131780 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00480.1	1.3e-62	82.86	ATP synthase subunit beta	[more]
AT5G08670.1	1.9e-21	43.20	ATP synthase alpha/beta family protein	[more]
AT5G08680.1	1.9e-21	43.20	ATP synthase alpha/beta family protein	[more]
AT5G08690.1	1.9e-21	43.20	ATP synthase alpha/beta family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004100	ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain	PFAM	PF02874	ATP-synt_ab_N	coord: 23..94 e-value: 1.4E-19 score: 70.4
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 98..140 e-value: 1.9E-7 score: 32.5
None	No IPR available	GENE3D	2.40.10.170		coord: 18..97 e-value: 5.8E-32 score: 111.6
None	No IPR available	PANTHER	PTHR15184	ATP SYNTHASE	coord: 1..140
None	No IPR available	PANTHER	PTHR15184:SF65	F0F1-TYPE ATP SYNTHASE, BETA SUBUNIT	coord: 1..140
None	No IPR available	CDD	cd18115	ATP-synt_F1_beta_N	coord: 19..98 e-value: 1.79446E-37 score: 120.699
IPR036121	ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily	SUPERFAMILY	50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase	coord: 19..97

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC07G131780.1	CaUC07G131780.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0046034	ATP metabolic process
biological_process	GO:0015986	ATP synthesis coupled proton transport
biological_process	GO:1902600	proton transmembrane transport
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0045261	proton-transporting ATP synthase complex, catalytic core F(1)
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0046961	proton-transporting ATPase activity, rotational mechanism
molecular_function	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism