CaUC07G131550 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC07G131550
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
LocationCiama_Chr07: 14980199 .. 14980931 (+)
RNA-Seq ExpressionCaUC07G131550
SyntenyCaUC07G131550
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACAGACAGAAGAGCGGGAAGTAGCATATCTTTCAAGAAACAAATTATGTTACTTACAAGCAAGGTATTCGCCCCCCCTTGAATAAAATAAAAGCAGCTATCTTGAATAAAAGAGGGGAAGCGGTATTGATTGGATTGACGGATTGAGGACGTCAGTCATGCTTTACCAATTTCCAATACCTACAGTTGATCCTGCTGATGTAATTTTAGCATAAAAAGCTTCTATTTCTTTAGCACCTCTTTAGCACCTAGTCATGCATGCTGACCGAAGCACCTGTACTTCAATCGATTAACCAAGCACGGGAGATATTCGCTAAAAAGATAACCGGGATATTGAATGAATAAAAGAAGGGTCGTAGACAGATGAGCGTTTGCGACCGTTTACAAGAGTGAATACCGAAACAGACAATTCCAGATGCCCTCAGACAGATGCCACTAAACAAGTAAAGGACAACGGACAGTTTTCGTGGATCGGGAAGACCAACTCTCATTCAAGGAAGCGGACCGTTGACGACAGCAGGCCGGGAAGGACAGATACTACTAAAAAAGCCGAAACTCGCATGTTTTTAGAGGCCGTACTTGACCCATCCGACCCCTTAAACTCGCAATTTAGCAAATCAAATACACCATTCCGGACCTTTTTCTCATGTCGCTACCAGCTACAGATCAGATATGACCGGTTGAAGAAAGAAGAAAAGATCGATGAACGATTAAGCGAGACTTTGCCTTAG

mRNA sequence

ATGACAGACAGAAGAGCGGGAAGTAGCATATCTTTCAAGAAACAAATTATGTTACTTACAAGCAAGACAGATGAGCGTTTGCGACCGTTTACAAGAGTGAATACCGAAACAGACAATTCCAGATGCCCTCAGACAGATGCCACTAAACAAGTAAAGGACAACGGACAGTTTTCGTGGATCGGGAAGACCAACTCTCATTCAAGGAAGCGGACCGTTGACGACAGCAGGCCGGGAAGGACAGATACTACTAAAAAAGCCGAAACTCGCATGTTTTTAGAGGCCGTACTTGACCCATCCGACCCCTTAAACTCGCAATTTAGCAAATCAAATACACCATTCCGGACCTTTTTCTCATGTCGCTACCAGCTACAGATCAGATATGACCGGTTGAAGAAAGAAGAAAAGATCGATGAACGATTAAGCGAGACTTTGCCTTAG

Coding sequence (CDS)

ATGACAGACAGAAGAGCGGGAAGTAGCATATCTTTCAAGAAACAAATTATGTTACTTACAAGCAAGACAGATGAGCGTTTGCGACCGTTTACAAGAGTGAATACCGAAACAGACAATTCCAGATGCCCTCAGACAGATGCCACTAAACAAGTAAAGGACAACGGACAGTTTTCGTGGATCGGGAAGACCAACTCTCATTCAAGGAAGCGGACCGTTGACGACAGCAGGCCGGGAAGGACAGATACTACTAAAAAAGCCGAAACTCGCATGTTTTTAGAGGCCGTACTTGACCCATCCGACCCCTTAAACTCGCAATTTAGCAAATCAAATACACCATTCCGGACCTTTTTCTCATGTCGCTACCAGCTACAGATCAGATATGACCGGTTGAAGAAAGAAGAAAAGATCGATGAACGATTAAGCGAGACTTTGCCTTAG

Protein sequence

MTDRRAGSSISFKKQIMLLTSKTDERLRPFTRVNTETDNSRCPQTDATKQVKDNGQFSWIGKTNSHSRKRTVDDSRPGRTDTTKKAETRMFLEAVLDPSDPLNSQFSKSNTPFRTFFSCRYQLQIRYDRLKKEEKIDERLSETLP
Homology
[Close]
BLAST of CaUC07G131550 vs. NCBI nr
Match: OIW13489.1 (hypothetical protein TanjilG_01057 [Lupinus angustifolius])

HSP 1 Score: 110.2 bits (274), Expect = 1.6e-20
Identity = 54/67 (80.60%), Postives = 59/67 (88.06%), Query Frame = 0 

Query: 20  TSKTDERLRPFTRVNTETDNSRCPQTDATKQVKDNGQFSWIGKTNSHSRKRTVDDSRPGR 79
           TS+    +RPFTRVNTETDNSRCPQTDAT +VKDN ++SWIGKTNSHSRKRTVDDSRPGR
Sbjct: 73  TSQALSLVRPFTRVNTETDNSRCPQTDATNKVKDNRKYSWIGKTNSHSRKRTVDDSRPGR 132

Query: 80  TDTTKKA 87
           TD T KA
Sbjct: 133 TDATNKA 139

[Close]
BLAST of CaUC07G131550 vs. NCBI nr
Match: PNY00607.1 (hypothetical protein L195_g023891 [Trifolium pratense])

HSP 1 Score: 97.8 bits (242), Expect = 8.0e-17
Identity = 47/60 (78.33%), Postives = 52/60 (86.67%), Query Frame = 0 

Query: 20  TSKTDERLRPFTRVNTETDNSRCPQTDATKQVKDNGQFSWIGKTNSHSRKRTVDDSRPGR 79
           TS+    +RPFT  NTET+NSRCP+TDATKQVKDN Q+SWIGKTNSHSRKRTVDD RPGR
Sbjct: 131 TSQALSLVRPFTNYNTETENSRCPKTDATKQVKDNRQYSWIGKTNSHSRKRTVDDCRPGR 190

[Close]
BLAST of CaUC07G131550 vs. ExPASy TrEMBL
Match: A0A1J7IF08 (Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_01057 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 7.6e-21
Identity = 54/67 (80.60%), Postives = 59/67 (88.06%), Query Frame = 0 

Query: 20  TSKTDERLRPFTRVNTETDNSRCPQTDATKQVKDNGQFSWIGKTNSHSRKRTVDDSRPGR 79
           TS+    +RPFTRVNTETDNSRCPQTDAT +VKDN ++SWIGKTNSHSRKRTVDDSRPGR
Sbjct: 73  TSQALSLVRPFTRVNTETDNSRCPQTDATNKVKDNRKYSWIGKTNSHSRKRTVDDSRPGR 132

Query: 80  TDTTKKA 87
           TD T KA
Sbjct: 133 TDATNKA 139

[Close]
BLAST of CaUC07G131550 vs. ExPASy TrEMBL
Match: A0A2K3NC51 (Uncharacterized protein OS=Trifolium pratense OX=57577 GN=L195_g023891 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 3.9e-17
Identity = 47/60 (78.33%), Postives = 52/60 (86.67%), Query Frame = 0 

Query: 20  TSKTDERLRPFTRVNTETDNSRCPQTDATKQVKDNGQFSWIGKTNSHSRKRTVDDSRPGR 79
           TS+    +RPFT  NTET+NSRCP+TDATKQVKDN Q+SWIGKTNSHSRKRTVDD RPGR
Sbjct: 131 TSQALSLVRPFTNYNTETENSRCPKTDATKQVKDNRQYSWIGKTNSHSRKRTVDDCRPGR 190

The following BLAST results are available for this feature:
BLAST of CaUC07G131550 vs. NCBI nr
Match NameE-valueIdentityDescription
OIW13489.11.6e-2080.60hypothetical protein TanjilG_01057 [Lupinus angustifolius][more]
PNY00607.18.0e-1778.33hypothetical protein L195_g023891 [Trifolium pratense][more]
BLAST of CaUC07G131550 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CaUC07G131550 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1J7IF087.6e-2180.60Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_01057 PE=4 S... [more]
A0A2K3NC513.9e-1778.33Uncharacterized protein OS=Trifolium pratense OX=57577 GN=L195_g023891 PE=4 SV=1[more]
BLAST of CaUC07G131550 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 66..85
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 53..85

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC07G131550.1CaUC07G131550.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane