CaUC07G131330 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC07G131330
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
LocationCiama_Chr07: 14013541 .. 14014633 (-)
RNA-Seq ExpressionCaUC07G131330
SyntenyCaUC07G131330
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GCTATCCCTCCCATCAATGAAAATCCAATAGAACATTTGGATTCTACTTATCGACATGTTAGTGAACGATCTAAATTTATGTAATCAAAGTTTATTTTAGTTTATAATTTTCTTTAATTAGAAAAAGTTGTGTTGTTGTTATGCAGGTGGTGAATGTGATTTTTACAAGTCTTTTGAATTTTTTGGGGCGATTAGGCGGCCTCTACATTAATTTAAGGGGTCAAGGCTACCTTCAAATTTATTCTCCTCGAGCTTTTTGGGATGTTGACTCATTTCGAGAAATGTTGCGTAAGTTCTCTATTTCATTTTCAAAAAAATTAGTCTTAAAAATAGATTCTAACTAACAACATCTTAGTTAAACTAGACCAATTAGAACTAATGGTTTAAAATTATTATACCTTGGAAACCCTAGTTGTTAATCTTGGGATCTTTGTGTTTTTTTTTTTTTTTCCCTTAATATTTGTTTGTATTTCTCCTTACATCCTTTTTTGTTGATTTTCTAATGTTTTGATTGAATAGATTAATTACATATTTATTTGGTTGATGGAATTAATGAACACAGGTGAGGTACTTAGTGATCAACGTAGGGTTCCACAAGAGAATGATGCAATTGTTTGGTATAGGACAAATTTACAATCTTTGTTTAATCGTTTTCCTCAAGAGCGTCGAATAATAGGTAATTTATTTATATTATGTAATGATGAATTAAAGTTTCATTATTTTAGAACAGAACTAATAGTTCATTATAATTTTAAATCTCAATCACACAATTAGACTTTAAAAGAAAATTAATTGAAACTAACTTAGTTTTTCTCAATGTCTACAGGTTGTTTACTCGATGACCATGATGGAAACAGACAAGAAATTAACATTCATGACTTTCTAAGATTTTTGGTTCATCCTAATGAAAATTTAATATTTGTGGTAAGTGTATATATACATGTGACTTAAAATAAACATTATCTTTTCTTCTAGTAAAGTTTATGATTAAATCTTGTTTTCTATTTATTTGATTTAGGTTGGTAACTTTAGAAACTATAGAGCGCTTGAGGAAGAGATTGATCAATATGTCAAAGGTACCAAATTATTTTAA

mRNA sequence

GCTATCCCTCCCATCAATGAAAATCCAATAGAACATTTGGATTCTACTTATCGACATGTGGTGAATGTGATTTTTACAAGTCTTTTGAATTTTTTGGGGCGATTAGGCGGCCTCTACATTAATTTAAGGGGTCAAGGCTACCTTCAAATTTATTCTCCTCGAGCTTTTTGGGATGTTGACTCATTTCGAGAAATGTTGCGTGAGGTACTTAGTGATCAACGTAGGGTTCCACAAGAGAATGATGCAATTGTTTGGTATAGGACAAATTTACAATCTTTGTTTAATCGTTTTCCTCAAGAGCGTCGAATAATAGGTTGTTTACTCGATGACCATGATGGAAACAGACAAGAAATTAACATTCATGACTTTCTAAGATTTTTGGTTCATCCTAATGAAAATTTAATATTTGTGGTTGGTAACTTTAGAAACTATAGAGCGCTTGAGGAAGAGATTGATCAATATGTCAAAGGTACCAAATTATTTTAA

Coding sequence (CDS)

GCTATCCCTCCCATCAATGAAAATCCAATAGAACATTTGGATTCTACTTATCGACATGTGGTGAATGTGATTTTTACAAGTCTTTTGAATTTTTTGGGGCGATTAGGCGGCCTCTACATTAATTTAAGGGGTCAAGGCTACCTTCAAATTTATTCTCCTCGAGCTTTTTGGGATGTTGACTCATTTCGAGAAATGTTGCGTGAGGTACTTAGTGATCAACGTAGGGTTCCACAAGAGAATGATGCAATTGTTTGGTATAGGACAAATTTACAATCTTTGTTTAATCGTTTTCCTCAAGAGCGTCGAATAATAGGTTGTTTACTCGATGACCATGATGGAAACAGACAAGAAATTAACATTCATGACTTTCTAAGATTTTTGGTTCATCCTAATGAAAATTTAATATTTGTGGTTGGTAACTTTAGAAACTATAGAGCGCTTGAGGAAGAGATTGATCAATATGTCAAAGGTACCAAATTATTTTAA

Protein sequence

AIPPINENPIEHLDSTYRHVVNVIFTSLLNFLGRLGGLYINLRGQGYLQIYSPRAFWDVDSFREMLREVLSDQRRVPQENDAIVWYRTNLQSLFNRFPQERRIIGCLLDDHDGNRQEINIHDFLRFLVHPNENLIFVVGNFRNYRALEEEIDQYVKGTKLF
Homology
BLAST of CaUC07G131330 vs. NCBI nr
Match: XP_022942054.1 (uncharacterized protein LOC111447242 [Cucurbita moschata])

HSP 1 Score: 292.0 bits (746), Expect = 3.2e-75
Identity = 136/156 (87.18%), Postives = 148/156 (94.87%), Query Frame = 0

Query: 1   AIPPINENPIEHLDSTYRHVVNVIFTSLLNFLGRLGGLYINLRGQGYLQIYSPRAFWDVD 60
           AIPP+N+NP+EHLDSTYRHVV+VIFTSLLNFLGRLGGLYINLRGQGYLQIYSPRAFWDVD
Sbjct: 32  AIPPMNDNPVEHLDSTYRHVVDVIFTSLLNFLGRLGGLYINLRGQGYLQIYSPRAFWDVD 91

Query: 61  SFREMLREVLSDQRRVPQENDAIVWYRTNLQSLFNRFPQERRIIGCLLDDHDGNRQEINI 120
           SFREMLREVLSDQ RVPQENDAI+W+ TNLQSLF+  PQERR+IGCLL+D  GN+QEI I
Sbjct: 92  SFREMLREVLSDQHRVPQENDAIIWHNTNLQSLFSLIPQERRVIGCLLEDQYGNKQEIKI 151

Query: 121 HDFLRFLVHPNENLIFVVGNFRNYRALEEEIDQYVK 157
           HDFLRFLVHPNENL+FVVG+FRNYR LEEEIDQYVK
Sbjct: 152 HDFLRFLVHPNENLVFVVGDFRNYRVLEEEIDQYVK 187

BLAST of CaUC07G131330 vs. NCBI nr
Match: KAG6600811.1 (hypothetical protein SDJN03_06044, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 292.0 bits (746), Expect = 3.2e-75
Identity = 136/156 (87.18%), Postives = 148/156 (94.87%), Query Frame = 0

Query: 1   AIPPINENPIEHLDSTYRHVVNVIFTSLLNFLGRLGGLYINLRGQGYLQIYSPRAFWDVD 60
           AIPP+N+NP+EHLDSTYRHVV+VIFTSLLNFLGRLGGLYINLRGQGYLQIYSPRAFWDVD
Sbjct: 32  AIPPMNDNPVEHLDSTYRHVVDVIFTSLLNFLGRLGGLYINLRGQGYLQIYSPRAFWDVD 91

Query: 61  SFREMLREVLSDQRRVPQENDAIVWYRTNLQSLFNRFPQERRIIGCLLDDHDGNRQEINI 120
           SFREMLREVLSDQ RVPQENDAI+W+ TNLQSLF+  PQERR+IGCLL+D  GN+QEI I
Sbjct: 92  SFREMLREVLSDQHRVPQENDAIIWHNTNLQSLFSLIPQERRVIGCLLEDQYGNKQEIKI 151

Query: 121 HDFLRFLVHPNENLIFVVGNFRNYRALEEEIDQYVK 157
           HDFLRFLVHPNENL+FVVG+FRNYR LEEEIDQYVK
Sbjct: 152 HDFLRFLVHPNENLVFVVGDFRNYRVLEEEIDQYVK 187

BLAST of CaUC07G131330 vs. NCBI nr
Match: XP_022989850.1 (uncharacterized protein LOC111486913 [Cucurbita maxima])

HSP 1 Score: 285.4 bits (729), Expect = 3.0e-73
Identity = 134/156 (85.90%), Postives = 146/156 (93.59%), Query Frame = 0

Query: 1   AIPPINENPIEHLDSTYRHVVNVIFTSLLNFLGRLGGLYINLRGQGYLQIYSPRAFWDVD 60
           AIPP+N+NP+EHLDSTYRHVV+VIFTSLLNFLGRLGGLYINL GQGYLQIYSPRAFWDVD
Sbjct: 32  AIPPMNDNPVEHLDSTYRHVVDVIFTSLLNFLGRLGGLYINLGGQGYLQIYSPRAFWDVD 91

Query: 61  SFREMLREVLSDQRRVPQENDAIVWYRTNLQSLFNRFPQERRIIGCLLDDHDGNRQEINI 120
           SFREMLREVLSDQ RV QENDAI+W+ TNLQSLF+  PQERR+IGCLL+D  GN+QEI I
Sbjct: 92  SFREMLREVLSDQHRVLQENDAIIWHNTNLQSLFSLIPQERRVIGCLLEDQYGNKQEIKI 151

Query: 121 HDFLRFLVHPNENLIFVVGNFRNYRALEEEIDQYVK 157
           HDFLRFLVHPNENL+FVVG+FRNYR LEEEIDQYVK
Sbjct: 152 HDFLRFLVHPNENLVFVVGDFRNYRVLEEEIDQYVK 187

BLAST of CaUC07G131330 vs. NCBI nr
Match: KAG7031448.1 (hypothetical protein SDJN02_05488 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 159.5 bits (402), Expect = 2.5e-35
Identity = 73/89 (82.02%), Postives = 81/89 (91.01%), Query Frame = 0

Query: 68  EVLSDQRRVPQENDAIVWYRTNLQSLFNRFPQERRIIGCLLDDHDGNRQEINIHDFLRFL 127
           EVLSDQ RVPQENDAI+W+ TNLQSLF+  PQERR+IGCLL+D  GN+QEI IHDFLRFL
Sbjct: 5   EVLSDQHRVPQENDAIIWHNTNLQSLFSLIPQERRVIGCLLEDQYGNKQEIKIHDFLRFL 64

Query: 128 VHPNENLIFVVGNFRNYRALEEEIDQYVK 157
           VHPNENL+FVVG+FRNYR LEEEIDQYVK
Sbjct: 65  VHPNENLVFVVGDFRNYRVLEEEIDQYVK 93

BLAST of CaUC07G131330 vs. ExPASy TrEMBL
Match: A0A6J1FQ78 (uncharacterized protein LOC111447242 OS=Cucurbita moschata OX=3662 GN=LOC111447242 PE=4 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 1.6e-75
Identity = 136/156 (87.18%), Postives = 148/156 (94.87%), Query Frame = 0

Query: 1   AIPPINENPIEHLDSTYRHVVNVIFTSLLNFLGRLGGLYINLRGQGYLQIYSPRAFWDVD 60
           AIPP+N+NP+EHLDSTYRHVV+VIFTSLLNFLGRLGGLYINLRGQGYLQIYSPRAFWDVD
Sbjct: 32  AIPPMNDNPVEHLDSTYRHVVDVIFTSLLNFLGRLGGLYINLRGQGYLQIYSPRAFWDVD 91

Query: 61  SFREMLREVLSDQRRVPQENDAIVWYRTNLQSLFNRFPQERRIIGCLLDDHDGNRQEINI 120
           SFREMLREVLSDQ RVPQENDAI+W+ TNLQSLF+  PQERR+IGCLL+D  GN+QEI I
Sbjct: 92  SFREMLREVLSDQHRVPQENDAIIWHNTNLQSLFSLIPQERRVIGCLLEDQYGNKQEIKI 151

Query: 121 HDFLRFLVHPNENLIFVVGNFRNYRALEEEIDQYVK 157
           HDFLRFLVHPNENL+FVVG+FRNYR LEEEIDQYVK
Sbjct: 152 HDFLRFLVHPNENLVFVVGDFRNYRVLEEEIDQYVK 187

BLAST of CaUC07G131330 vs. ExPASy TrEMBL
Match: A0A6J1JNI2 (uncharacterized protein LOC111486913 OS=Cucurbita maxima OX=3661 GN=LOC111486913 PE=4 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 1.5e-73
Identity = 134/156 (85.90%), Postives = 146/156 (93.59%), Query Frame = 0

Query: 1   AIPPINENPIEHLDSTYRHVVNVIFTSLLNFLGRLGGLYINLRGQGYLQIYSPRAFWDVD 60
           AIPP+N+NP+EHLDSTYRHVV+VIFTSLLNFLGRLGGLYINL GQGYLQIYSPRAFWDVD
Sbjct: 32  AIPPMNDNPVEHLDSTYRHVVDVIFTSLLNFLGRLGGLYINLGGQGYLQIYSPRAFWDVD 91

Query: 61  SFREMLREVLSDQRRVPQENDAIVWYRTNLQSLFNRFPQERRIIGCLLDDHDGNRQEINI 120
           SFREMLREVLSDQ RV QENDAI+W+ TNLQSLF+  PQERR+IGCLL+D  GN+QEI I
Sbjct: 92  SFREMLREVLSDQHRVLQENDAIIWHNTNLQSLFSLIPQERRVIGCLLEDQYGNKQEIKI 151

Query: 121 HDFLRFLVHPNENLIFVVGNFRNYRALEEEIDQYVK 157
           HDFLRFLVHPNENL+FVVG+FRNYR LEEEIDQYVK
Sbjct: 152 HDFLRFLVHPNENLVFVVGDFRNYRVLEEEIDQYVK 187

BLAST of CaUC07G131330 vs. ExPASy TrEMBL
Match: A0A0A0KJD0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G056070 PE=4 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 7.6e-38
Identity = 80/89 (89.89%), Postives = 86/89 (96.63%), Query Frame = 0

Query: 20  VVNVIFTSLLNFLGRLGGLYINLRGQGYLQIYSPRAFWDVDSFREMLREVLSDQRRVPQE 79
           VV+VIFTSLLNFLGRLGGLYINLRGQGYLQI+SPRAFW+VDSFREMLREVLSDQ RVPQE
Sbjct: 3   VVDVIFTSLLNFLGRLGGLYINLRGQGYLQIHSPRAFWNVDSFREMLREVLSDQHRVPQE 62

Query: 80  NDAIVWYRTNLQSLFNRFPQERRIIGCLL 109
           NDAIVW+RTNLQ+LFN FP+ERRIIG LL
Sbjct: 63  NDAIVWHRTNLQALFNHFPRERRIIGTLL 91

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022942054.13.2e-7587.18uncharacterized protein LOC111447242 [Cucurbita moschata][more]
KAG6600811.13.2e-7587.18hypothetical protein SDJN03_06044, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022989850.13.0e-7385.90uncharacterized protein LOC111486913 [Cucurbita maxima][more]
KAG7031448.12.5e-3582.02hypothetical protein SDJN02_05488 [Cucurbita argyrosperma subsp. argyrosperma][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1FQ781.6e-7587.18uncharacterized protein LOC111447242 OS=Cucurbita moschata OX=3662 GN=LOC1114472... [more]
A0A6J1JNI21.5e-7385.90uncharacterized protein LOC111486913 OS=Cucurbita maxima OX=3661 GN=LOC111486913... [more]
A0A0A0KJD07.6e-3889.89Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G056070 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC07G131330.1CaUC07G131330.1mRNA